Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
phage transcriptional regulator, AlpA |
NC_008825 (Methylibium petroleiphilum PM1) |
3e-25 |
80 |
|
phage transcriptional regulator AlpA |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
3e-25 |
80 |
|
phage transcriptional regulator AlpA |
NC_015422 (Alicycliphilus denitrificans K601) |
3e-24 |
74 |
|
phage transcriptional regulator AlpA |
NC_011662 (Thauera sp. MZ1T) |
3e-24 |
74 |
|
phage transcriptional regulator AlpA |
NC_018028 (Pseudomonas stutzeri CCUG 29243) |
4e-24 |
73 |
|
phage transcriptional regulator AlpA |
NC_011901 (Thioalkalivibrio sulfidophilus HL-EbGR7) |
1e-23 |
73 |
|
prophage cp4-57 regulatory |
NC_014910 (Alicycliphilus denitrificans BC) |
2e-23 |
72 |
|
phage transcriptional regulator AlpA |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
6e-23 |
82 |
|
transcriptional regulator |
NC_010170 (Bordetella petrii DSM 12804) |
6e-23 |
79 |
|
phage transcriptional regulator, AlpA |
NC_013421 (Pectobacterium wasabiae WPP163) |
2e-22 |
85 |
|
phage transcriptional regulator AlpA |
NC_012912 (Dickeya zeae Ech1591) |
9e-22 |
84 |
|
phage transcriptional regulator, AlpA |
NC_016147 (Pseudoxanthomonas spadix BD-a59) |
5e-21 |
67 |
|
phage transcriptional regulator AlpA |
NC_008344 (Nitrosomonas eutropha C91) |
7e-21 |
78 |
|
transcriptional regulator |
NC_010170 (Bordetella petrii DSM 12804) |
3e-20 |
76 |
|
AlpA family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
6e-20 |
59 |
|
hypothetical protein |
NC_007086 (Xanthomonas campestris 8004) |
1e-19 |
70 |
|
phage-related regulatory protein |
NC_010688 (Xanthomonas campestris B100) |
1e-19 |
70 |
|
transcriptional regulator |
NC_006513 (Aromatoleum aromaticum EbN1) |
1e-19 |
71 |
|
phage transcriptional regulator, AlpA |
NC_012691 (Tolumonas auensis DSM 9187) |
2e-19 |
75 |
|
hypothetical protein |
NC_002488 (Xylella fastidiosa 9a5c) |
3e-19 |
67 |
|
Phage-related regulatory protein |
NC_020815 (Xanthomonas citri Aw12879) |
7e-19 |
75 |
|
Transcriptional regulator in PFGI-1-like cluster |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
8e-19 |
75 |
|
CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage |
NC_009138 (Herminiimonas arsenicoxydans ) |
8e-19 |
75 |
|
Transcriptional regulator in PFGI-1-like cluster |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
8e-19 |
73 |
|
phage transcriptional regulator AlpA |
NC_008782 (Acidovorax sp. JS42) |
8e-19 |
73 |
|
prophage cp4-57 regulatory |
NC_014910 (Alicycliphilus denitrificans BC) |
8e-19 |
73 |
|
transcriptional regulator |
NC_010170 (Bordetella petrii DSM 12804) |
8e-19 |
73 |
|
DNA-binding transcriptional activator |
NC_007973 (Cupriavidus metallidurans CH34) |
8e-19 |
73 |
|
hypothetical protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
8e-19 |
73 |
|
hypothetical protein |
NC_011770 (Pseudomonas aeruginosa LESB58) |
8e-19 |
73 |
|
transcriptional regulator |
NC_017671 (Stenotrophomonas maltophilia D457) |
8e-19 |
73 |
|
phage-like protein |
NC_017958 (Tistrella mobilis KA081020-065) |
8e-19 |
73 |
|
phage transcriptional regulator AlpA |
NC_009719 (Parvibaculum lavamentivorans DS-1) |
9e-19 |
75 |
|
prophage CP4-57 regulatory protein AlpA |
NC_014640 (Achromobacter xylosoxidans A8) |
1e-18 |
75 |
|
Transcriptional regulator in PFGI-1-like cluster |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
2e-18 |
71 |
|
phage transcriptional regulator AlpA |
NC_008782 (Acidovorax sp. JS42) |
2e-18 |
71 |
|
AlpA family regulatory protein |
NC_007508 (Xanthomonas campestris 85-10) |
2e-18 |
71 |
|
putative phage-like protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
2e-18 |
60 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
2e-18 |
71 |
|
phage transcriptional regulator AlpA |
NC_010002 (Delftia acidovorans SPH-1) |
2e-18 |
71 |
|
phage transcriptional regulator AlpA |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
2e-18 |
71 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
4e-18 |
73 |
|
phage transcriptional regulator AlpA |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
5e-18 |
73 |
|
phage transcriptional regulator AlpA |
NC_015733 (Pseudomonas putida S16) |
1e-17 |
58 |
|
phage transcriptional regulator, AlpA |
NC_018220 (Pseudomonas putida DOT-T1E) |
6e-17 |
60 |
|
phage transcriptional regulator AlpA |
NC_009512 (Pseudomonas putida F1) |
6e-17 |
60 |
|
AlpA family transcriptional regulator |
NC_021491 (Pseudomonas putida H8234) |
9e-17 |
57 |
|
transcriptional regulator in PFGI-1-like cluster |
NC_016830 (Pseudomonas fluorescens F113) |
1e-16 |
71 |
|
phage transcriptional regulator AlpA |
NC_017986 (Pseudomonas putida ND6) |
1e-16 |
63 |
|
phage transcriptional regulator AlpA |
NC_010501 (Pseudomonas putida W619) |
2e-16 |
63 |
|
AlpA family transcriptional regulator |
NC_021491 (Pseudomonas putida H8234) |
6e-16 |
61 |
|
phage transcriptional regulator AlpA |
NC_008752 (Acidovorax citrulli AAC00-1) |
1e-14 |
64 |
|
phage transcriptional regulator, AlpA |
NC_014972 (Desulfobulbus propionicus DSM 2032) |
7e-14 |
53 |
|
hypothetical protein |
NC_018679 (Alteromonas macleodii Balearic Sea AD45) |
5e-13 |
56 |
|
hypothetical protein |
NC_021710 (Alteromonas macleodii Ionian Sea U4) |
5e-13 |
56 |
|
hypothetical protein |
NC_021717 (Alteromonas macleodii Ionian Sea U7) |
5e-13 |
56 |
|
hypothetical protein |
NC_021712 (Alteromonas macleodii Ionian Sea U8) |
5e-13 |
56 |
|
hypothetical protein |
NC_021716 (Alteromonas macleodii English Channel 615) |
6e-13 |
56 |
|
hypothetical protein |
NC_019393 (Alteromonas macleodii AltDE1) |
9e-13 |
56 |
|
regulatory protein |
NC_011138 (Alteromonas macleodii Deep ecotype) |
9e-13 |
56 |
|
hypothetical protein |
NC_021713 (Alteromonas macleodii Ionian Sea UM7) |
9e-13 |
56 |
|
hypothetical protein |
NC_015554 (Alteromonas sp. SN2) |
9e-13 |
56 |
|
prophage CP4-57 regulatory family protein |
NC_020888 (Thalassolituus oleivorans MIL-1) |
1e-12 |
56 |
|
prophage regulatory protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
1e-11 |
48 |
|
putative transcriptional regulator |
NC_018012 (Thiocystis violascens DSM 198) |
2e-11 |
43 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
2e-11 |
48 |
|
Phage transcriptional regulator, AlpA |
NC_017845 (Pectobacterium sp. SCC3193) |
3e-11 |
48 |
|
phage transcriptional regulator AlpA |
NC_008709 (Psychromonas ingrahamii 37) |
3e-11 |
48 |
|
putative prophage regulatory protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
4e-11 |
50 |
|
hypothetical protein |
NC_009792 (Citrobacter koseri ATCC BAA-895) |
4e-11 |
49 |
|
putative transcriptional regulator |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
4e-11 |
49 |
|
transcriptional regulator |
NC_009381 (Yersinia pestis Pestoides F) |
4e-11 |
49 |
|
phage transcriptional regulator AlpA |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
4e-11 |
49 |
|
putative prophage regulatory protein |
NC_017047 (Rahnella aquatilis HX2) |
5e-11 |
50 |
|
transcriptional regulator AlpA family |
NC_011283 (Klebsiella pneumoniae 342) |
5e-11 |
44 |
|
phage transcriptional regulator, AlpA |
NC_013421 (Pectobacterium wasabiae WPP163) |
6e-11 |
48 |
|
hypothetical protein |
NC_021714 (Alteromonas macleodii Ionian Sea UM4b) |
1e-10 |
57 |
|
phage transcriptional regulator AlpA |
NC_008740 (Marinobacter aquaeolei VT8) |
2e-10 |
45 |
|
DNA-binding protein |
NC_003911 (Ruegeria pomeroyi DSS-3) |
2e-10 |
46 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
2e-10 |
45 |
|
predicted phage transcriptional regulator |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
2e-10 |
42 |
|
putative dna binding protein |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
2e-10 |
42 |
|
putative transcriptional regulator |
NC_020304 (Desulfocapsa sulfexigens DSM 10523) |
5e-10 |
46 |
|
phage transcriptional regulator AlpA |
NC_012912 (Dickeya zeae Ech1591) |
5e-10 |
46 |
|
hypothetical protein |
NC_021499 (Pseudomonas resinovorans NBRC 106553) |
7e-10 |
50 |
|
AlpA family transcriptional regulator |
NC_011138 (Alteromonas macleodii Deep ecotype) |
7e-10 |
44 |
|
DNA-binding protein |
NC_014500 (Dickeya dadantii 3937) |
8e-10 |
46 |
|
prophage regulatory protein |
NC_010554 (Proteus mirabilis HI4320) |
9e-10 |
48 |
|
prophage regulatory protein-like protein |
NC_020908 (Octadecabacter arcticus 238) |
1e-09 |
46 |
|
DNA-binding protein |
NC_014500 (Dickeya dadantii 3937) |
1e-09 |
43 |
|
phage transcriptional regulator AlpA |
NC_013592 (Dickeya dadantii Ech586) |
1e-09 |
43 |
|
phage transcriptional regulator AlpA |
NC_012880 (Dickeya dadantii Ech703) |
1e-09 |
43 |
|
phage transcriptional regulator AlpA |
NC_012912 (Dickeya zeae Ech1591) |
1e-09 |
43 |
|
phage transcriptional regulator AlpA |
NC_012912 (Dickeya zeae Ech1591) |
1e-09 |
43 |
|
putative transcriptional regulator |
NC_016818 (Rahnella aquatilis CIP 78.65) |
1e-09 |
48 |
|
putative transcriptional regulator |
NC_016616 (Dechlorosoma suillum PS) |
1e-09 |
41 |
|
prophage regulatory protein |
NC_009348 (Aeromonas salmonicida A449) |
2e-09 |
43 |
|
AlpA family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
3e-09 |
44 |
|
regulatory protein |
NC_018079 (Enterobacter cloacae SDM) |
6e-09 |
45 |
|
phage transcriptional regulator, AlpA |
NC_016041 (Glaciecola nitratireducens FR1064) |
6e-09 |
43 |
|
transcriptional regulator |
NC_007404 (Thiobacillus denitrificans ATCC 25259) |
9e-09 |
47 |
|
putative phage DNA binding protein |
NC_017656 (Escherichia coli RM12579) |
1e-08 |
45 |
|
phage transcriptional regulator, AlpA |
NC_008309 (Haemophilus somnus 129PT) |
1e-08 |
48 |
|
Phage transcriptional regulator, AlpA |
NC_011748 (Escherichia coli 55989) |
2e-08 |
42 |
|
phage transcriptional regulator AlpA |
NC_009439 (Pseudomonas mendocina ymp) |
2e-08 |
46 |
|
phage transcriptional regulator, AlpA |
NC_008321 (Shewanella sp. MR-4) |
2e-08 |
42 |
|
hypothetical protein |
NC_014125 (Legionella pneumophila 2300/99 Alcoy) |
2e-08 |
43 |
|
prophage CP4-57 regulatory protein AlpA |
NC_009494 (Legionella pneumophila Corby) |
2e-08 |
43 |
|
DNA-binding protein |
NC_014012 (Shewanella violacea DSS12) |
2e-08 |
41 |
|
phage transcriptional regulator AlpA |
NC_011663 (Shewanella baltica OS223) |
2e-08 |
41 |
|
phage transcriptional regulator AlpA |
NC_011663 (Shewanella baltica OS223) |
3e-08 |
41 |
|
Transcriptional regulator, AlpA like protein |
NC_017309 (Edwardsiella tarda FL6-60) |
3e-08 |
44 |
|
DNA-binding protein |
NC_020802 (Psychromonas sp. CNPT3) |
3e-08 |
43 |
|
DNA-binding transcriptional activator; CP4-57 prophage |
NC_017574 (Ralstonia solanacearum Po82) |
4e-08 |
50 |
|
phage transcriptional regulator AlpA |
NC_009901 (Shewanella pealeana ATCC 700345) |
4e-08 |
44 |
|
putative phage DNA binding protein |
NC_011741 (Escherichia coli IAI1) |
7e-08 |
44 |
|
phage transcriptional regulator AlpA |
NC_008709 (Psychromonas ingrahamii 37) |
8e-08 |
44 |
|
phage transcriptional regulator, AlpA |
NC_012917 (Pectobacterium carotovorum PC1) |
8e-08 |
43 |
|
phage transcriptional regulator, AlpA |
NC_013421 (Pectobacterium wasabiae WPP163) |
1e-07 |
43 |
|
hypothetical protein |
NC_007722 (Erythrobacter litoralis HTCC2594) |
1e-07 |
42 |
|
putative phage DNA binding protein |
NC_020796 (Edwardsiella tarda C07-087) |
1e-07 |
42 |
|
phage transcriptional regulator, AlpA |
NC_009436 (Enterobacter sp. 638) |
2e-07 |
43 |
|
phage transcriptional regulator, AlpA |
NC_014216 (Desulfurivibrio alkaliphilus AHT2) |
2e-07 |
41 |
|
transcriptional regulator |
NC_021286 (Idiomarina loihiensis GSL 199) |
2e-07 |
41 |
|
transcriptional regulator |
NC_006512 (Idiomarina loihiensis L2TR) |
2e-07 |
41 |
|
DNA-binding protein |
NC_020829 (Pseudomonas denitrificans ATCC 13867) |
2e-07 |
43 |
|
regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
2e-07 |
42 |
|
phage regulatory protein |
NC_011274 (Salmonella enterica 287/91) |
4e-07 |
42 |
|
putative phage regulatory protein |
NC_022221 (Salmonella enterica CDC1983-67) |
4e-07 |
42 |
|
hypothetical protein |
NC_011205 (Salmonella enterica CT_02021853) |
4e-07 |
42 |
|
phage regulatory protein |
NC_011294 (Salmonella enterica P125109) |
4e-07 |
42 |
|
putative phage regulatory protein |
NC_016831 (Salmonella enterica RKS5078) |
4e-07 |
42 |
|
DNA-binding protein |
NC_021984 (Salmonella enterica S06004) |
4e-07 |
42 |
|
hypothetical protein |
NC_011149 (Salmonella enterica SL483) |
4e-07 |
42 |
|
hypothetical protein |
NC_013508 (Edwardsiella tarda EIB202) |
5e-07 |
44 |
|
phage transcriptional regulator, AlpA |
NC_022268 (Serratia sp. ATCC 39006) |
6e-07 |
44 |
|
hypothetical protein |
NC_011094 (Salmonella enterica CVM19633) |
8e-07 |
45 |
|
phage transcriptional regulator, AlpA |
NC_015554 (Alteromonas sp. SN2) |
1e-06 |
41 |
|
prophage regulatory protein |
NC_015580 (Novosphingobium sp. PP1Y) |
2e-06 |
45 |
|
Phage transcriptional regulator, AlpA |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-06 |
41 |
|
phage transcriptional regulator AlpA |
NC_017986 (Pseudomonas putida ND6) |
2e-06 |
46 |
|
phage transcriptional regulator, AlpA |
NC_016631 (Granulicella mallensis MP5ACTX8) |
2e-06 |
43 |
|
phage transcriptional regulator AlpA |
NC_013422 (Halothiobacillus neapolitanus c2) |
2e-06 |
43 |
|
AlpA family phage transcriptional regulator |
NC_017554 (Pantoea ananatis PA13) |
2e-06 |
44 |
|
hypothetical protein |
NC_009792 (Citrobacter koseri ATCC BAA-895) |
5e-06 |
42 |
|
phage transcriptional regulator AlpA |
NC_020260 (Cronobacter sakazakii Sp291) |
5e-06 |
43 |
|
phage transcriptional regulator |
NC_016027 (Gluconacetobacter xylinus NBRC 3288) |
7e-06 |
43 |
|
hypothetical protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
3e-05 |
42 |
|
putative prophage regulatory protein |
NC_017626 (Escherichia coli 042) |
4e-05 |
41 |
|
DNA binding protein |
NC_013941 (Escherichia coli CB9615) |
4e-05 |
41 |
|
putative phage regulatory protein |
NC_011745 (Escherichia coli ED1a) |
4e-05 |
41 |
|
putative phage regulatory protein |
NC_011750 (Escherichia coli IAI39) |
4e-05 |
41 |
|
putative DNA binding protein |
NC_017656 (Escherichia coli RM12579) |
4e-05 |
41 |
|
DNA binding protein |
NC_002695 (Escherichia coli Sakai) |
4e-05 |
41 |
|
DNA binding protein |
NC_013008 (Escherichia coli TW14359) |
4e-05 |
41 |
|
putative DNA binding protein |
NC_017906 (Escherichia coli Xuzhou21) |
4e-05 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF440524' AND ph.id_pai_orf='116' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc