Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
conserved hypothetical protein |
NC_003198 (Salmonella enterica CT18) |
0.0 |
100 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
0.0 |
99 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
0.0 |
99 |
|
hypothetical protein |
NC_011147 (Salmonella enterica AKU12601) |
0.0 |
99 |
|
hypothetical protein |
NC_006511 (Salmonella enterica ATCC 9150) |
0.0 |
99 |
|
bacteriophage replication protein A |
NC_020260 (Cronobacter sakazakii Sp291) |
0.0 |
96 |
|
bacteriophage replication protein A |
NC_014121 (Enterobacter cloacae ATCC 13047) |
0.0 |
95 |
|
bacteriophage replication protein A |
NC_020307 (Salmonella enterica CFSAN001992) |
0.0 |
96 |
|
hypothetical protein |
NC_003197 (Salmonella enterica LT2) |
0.0 |
92 |
|
hypothetical protein |
NC_016860 (Salmonella enterica T000240) |
0.0 |
92 |
|
hypothetical protein |
NC_021151 (Salmonella enterica U288) |
0.0 |
92 |
|
bacteriophage replication gene A |
NC_011205 (Salmonella enterica CT_02021853) |
0.0 |
89 |
|
bacteriophage protein |
NC_016810 (Salmonella enterica SL1344) |
0.0 |
95 |
|
putative replication endonuclease from prophage-like region |
NC_016857 (Salmonella enterica ST4/74) |
0.0 |
95 |
|
bacteriophage protein |
NC_017046 (Salmonella enterica 798) |
0.0 |
95 |
|
possible endonuclease |
NC_003198 (Salmonella enterica CT18) |
0.0 |
85 |
|
replication endonuclease from prophage-like region |
NC_016832 (Salmonella enterica P-stx-12) |
0.0 |
85 |
|
endonuclease |
NC_004631 (Salmonella enterica Ty2) |
0.0 |
85 |
|
endonuclease |
NC_021176 (Salmonella enterica Ty21a) |
0.0 |
85 |
|
putative replication protein for prophage |
NC_012967 (Escherichia coli REL606) |
0.0 |
84 |
|
replication protein for prophage |
NC_004431 (Escherichia coli CFT073) |
0.0 |
84 |
|
replication protein for prophage |
NC_011993 (Escherichia coli LF82) |
0.0 |
85 |
|
bacteriophage replication protein A |
NC_022082 (Klebsiella pneumoniae JM45) |
0.0 |
86 |
|
replication gene A protein |
NC_009800 (Escherichia coli HS) |
0.0 |
85 |
|
replication protein A |
NC_020163 (Escherichia coli APEC O78) |
0.0 |
84 |
|
endonuclease |
NC_007613 (Shigella boydii Sb227) |
0.0 |
85 |
|
replication protein A |
NC_016902 (Escherichia coli KO11FL) |
0.0 |
84 |
|
putative replication protein for prophage |
NC_017660 (Escherichia coli KO11FL) |
0.0 |
84 |
|
replication gene A |
NC_017635 (Escherichia coli W) |
0.0 |
84 |
|
putative replication protein for prophage |
NC_017664 (Escherichia coli W) |
0.0 |
84 |
|
replication protein |
NC_011601 (Escherichia coli E2348/69) |
0.0 |
84 |
|
Replication gene A |
NC_017663 (Escherichia coli P12b) |
0.0 |
84 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
0.0 |
84 |
|
replication gene A |
NC_010468 (Escherichia coli ATCC 8739) |
0.0 |
84 |
|
replication protein for prophage |
NC_010694 (Erwinia tasmaniensis Et1/99) |
0.0 |
81 |
|
bacteriophage replication gene A |
NC_009436 (Enterobacter sp. 638) |
0.0 |
87 |
|
bacteriophage replication protein A |
NC_017540 (Klebsiella pneumoniae KCTC 2242) |
0.0 |
91 |
|
putative bacteriophage replication gene A protein |
NC_011745 (Escherichia coli ED1a) |
0.0 |
88 |
|
hypothetical protein |
NC_021984 (Salmonella enterica S06004) |
0.0 |
89 |
|
bacteriophage replication gene A protein (endonuclease) |
NC_011742 (Escherichia coli S88) |
0.0 |
88 |
|
replication protein A |
NC_013850 (Klebsiella variicola At-22) |
0.0 |
58 |
|
phage replication protein (endonuclease) |
NC_008800 (Yersinia enterocolitica 8081) |
6e-145 |
48 |
|
phage protein |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
4e-139 |
46 |
|
replication gene A |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
6e-139 |
46 |
|
prophage CP-933T replication protein |
NC_007946 (Escherichia coli UTI89) |
2e-137 |
42 |
|
bacteriophage replication gene A protein |
NC_011353 (Escherichia coli EC4115) |
4e-137 |
42 |
|
replication protein for prophage CP-933T |
NC_013008 (Escherichia coli TW14359) |
4e-137 |
42 |
|
phage DNA replication protein |
NC_013716 (Citrobacter rodentium ICC168) |
5e-137 |
42 |
|
replication protein for prophage CP-933T |
NC_002655 (Escherichia coli EDL933) |
2e-136 |
42 |
|
phage DNA replication protein |
NC_013716 (Citrobacter rodentium ICC168) |
4e-136 |
43 |
|
Putative Phage replication protein |
NC_017644 (Escherichia coli NA114) |
6e-136 |
42 |
|
replication protein for prophage CP-933T |
NC_016822 (Shigella sonnei 53G) |
6e-136 |
42 |
|
putative phage replication protein |
NC_011415 (Escherichia coli SE11) |
2e-135 |
42 |
|
replication protein |
NC_011601 (Escherichia coli E2348/69) |
8e-135 |
44 |
|
phage replication protein |
NC_002695 (Escherichia coli Sakai) |
1e-134 |
43 |
|
phage replication protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-134 |
43 |
|
phage replication protein |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-134 |
43 |
|
phage replication protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-134 |
43 |
|
phage replication protein |
NC_017641 (Escherichia coli UMNK88) |
3e-134 |
42 |
|
putative replication gene A protein |
NC_017628 (Escherichia coli IHE3034) |
4e-134 |
42 |
|
replication protein |
NC_013353 (Escherichia coli 12009) |
8e-134 |
42 |
|
phage replication protein |
NC_013941 (Escherichia coli CB9615) |
1e-133 |
43 |
|
replication protein |
NC_013361 (Escherichia coli 11368) |
3e-133 |
43 |
|
phage replication protein |
NC_011748 (Escherichia coli 55989) |
5e-133 |
42 |
|
putative bacteriophage replication gene A |
NC_017633 (Escherichia coli ETEC H10407) |
5e-133 |
42 |
|
replication protein |
NC_013361 (Escherichia coli 11368) |
6e-133 |
42 |
|
Phage replication protein |
NC_021870 (Salmonella bongori N268-08) |
3e-129 |
43 |
|
phage replication protein A |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
2e-99 |
42 |
|
replication protein A |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-98 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003198_P9' AND ph.id_pai_orf='111' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc