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Homologs of topB gene of AF440523

186

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NH44784_010001
( YP_008028101.1 )

DNA topoisomerase III

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

100

2) topB2
( YP_584446.1 )

DNA topoisomerase III

NC_007973
(Cupriavidus metallidurans CH34)

0.0

100

3) Plav_3385
( YP_001414646.1 )

DNA topoisomerase III

NC_009719
(Parvibaculum lavamentivorans DS-1)

0.0

100

4) PADK2_12250
( YP_006482435.1 )

DNA topoisomerase III

NC_018080
(Pseudomonas aeruginosa DK2)

0.0

100

5) PLES_27011
( YP_002440294.1 )

DNA topoisomerase III

NC_011770
(Pseudomonas aeruginosa LESB58)

0.0

100

6) topB
( YP_006184298.1 )

DNA topoisomerase III

NC_017671
(Stenotrophomonas maltophilia D457)

0.0

100

7) topB
( YP_006373679.1 )

DNA topoisomerase III

NC_017958
(Tistrella mobilis KA081020-065)

0.0

8) NH44784_010791
( YP_008028179.1 )

DNA topoisomerase III

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

9) topB3
( YP_001630053.1 )

DNA topoisomerase III

NC_010170
(Bordetella petrii DSM 12804)

0.0

10) xccb100_2412
( YP_001903817.1 )

DNA topoisomerase III

NC_010688
(Xanthomonas campestris B100)

0.0

11) topB
( YP_364018.1 )

DNA topoisomerase III

NC_007508
(Xanthomonas campestris 85-10)

0.0

12) XC_2064
( YP_243144.1 )

DNA topoisomerase III

NC_007086
(Xanthomonas campestris 8004)

0.0

13) NH44784_008881
( YP_008027990.1 )

DNA topoisomerase III

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

0.0

14) topA
( YP_007649647.1 )

Topoisomerase IA

NC_020815
(Xanthomonas citri Aw12879)

0.0

15) topB2
( YP_364137.1 )

DNA topoisomerase III

NC_007508
(Xanthomonas campestris 85-10)

0.0

16) Ajs_1311
( YP_985607.1 )

DNA topoisomerase III

NC_008782
(Acidovorax sp. JS42)

0.0

17) Ajs_1445
( YP_985731.1 )

DNA topoisomerase III

NC_008782
(Acidovorax sp. JS42)

0.0

18) topB1
( YP_003977119.1 )

DNA topoisomerase III 1

NC_014640
(Achromobacter xylosoxidans A8)

0.0

19) topB2
( YP_001629640.1 )

DNA topoisomerase III

NC_010170
(Bordetella petrii DSM 12804)

0.0

20) topB4
( YP_001632921.1 )

DNA topoisomerase III

NC_010170
(Bordetella petrii DSM 12804)

0.0

21) Daci_4150
( YP_001565166.1 )

DNA topoisomerase III

NC_010002
(Delftia acidovorans SPH-1)

0.0

22) PSTAA_1279
( YP_005937931.1 )

DNA topoisomerase III

NC_017532
(Pseudomonas stutzeri DSM 4166)

0.0

23) NCGM2_1441
( YP_005979692.1 )

DNA topoisomerase III

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

0.0

24) Neut_0116
( YP_746369.1 )

DNA topoisomerase III

NC_008344
(Nitrosomonas eutropha C91)

0.0

25) W5S_1525
( YP_006282491.1 )

DNA topoisomerase

NC_017845
(Pectobacterium sp. SCC3193)

0.0

26) Pecwa_1657
( YP_003259054.1 )

DNA topoisomerase III

NC_013421
(Pectobacterium wasabiae WPP163)

0.0

27) Tola_2404
( YP_002893587.1 )

DNA topoisomerase III

NC_012691
(Tolumonas auensis DSM 9187)

0.0

28) Dd1591_0466
( YP_003002832.1 )

DNA topoisomerase III

NC_012912
(Dickeya zeae Ech1591)

0.0

29) Alide2_1884
( YP_004387778.1 )

DNA topoisomerase III

NC_015422
(Alicycliphilus denitrificans K601)

0.0

30) topB1
( YP_158408.1 )

DNA topoisomerase III

NC_006513
(Aromatoleum aromaticum EbN1)

0.0

31) BN117_0555
( YP_006894604.1 )

DNA topoisomerase III

NC_018828
(Bordetella parapertussis Bpp5)

0.0

32) PSTAB_1184
( YP_004713554.1 )

DNA topoisomerase III

NC_015740
(Pseudomonas stutzeri ATCC 17588)

0.0

33) Ajs_2233
( YP_986473.1 )

DNA topoisomerase III

NC_008782
(Acidovorax sp. JS42)

0.0

34) topB
( YP_001100248.1 )

DNA topoisomerase III

NC_009138
(Herminiimonas arsenicoxydans )

0.0

35) Tgr7_2823
( YP_002514883.1 )

DNA topoisomerase III

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

0.0

36) Alide2_1747
( YP_004387651.1 )

DNA topoisomerase III

NC_015422
(Alicycliphilus denitrificans K601)

0.0

37) Mpe_A2342
( YP_001021533.1 )

DNA topoisomerase III

NC_008825
(Methylibium petroleiphilum PM1)

0.0

38) Alide_2714
( YP_004127332.1 )

DNA topoisomerase iii

NC_014910
(Alicycliphilus denitrificans BC)

0.0

39) DSC_04250
( YP_004929544.1 )

DNA topoisomerase III

NC_016147
(Pseudoxanthomonas spadix BD-a59)

0.0

40) Tmz1t_0990
( YP_002354652.1 )

DNA topoisomerase III

NC_011662
(Thauera sp. MZ1T)

0.0

41) A458_06150
( YP_006456899.1 )

DNA topoisomerase III

NC_018028
(Pseudomonas stutzeri CCUG 29243)

0.0

42) XF1776
( NP_299064.1 )

DNA topoisomerase I

NC_002488
(Xylella fastidiosa 9a5c)

0.0

43) XAC29_11200
( YP_007636658.1 )

DNA topoisomerase III

NC_020800
(Xanthomonas axonopodis Xac29-1)

0.0

44) topB
( NP_642529.1 )

DNA topoisomerase III

NC_003919
(Xanthomonas axonopodis 306)

0.0

45) Aave_0558
( YP_968937.1 )

DNA topoisomerase III

NC_008752
(Acidovorax citrulli AAC00-1)

0.0

46) Pfl01_3001
( YP_348730.1 )

DNA topoisomerase III

NC_007492
(Pseudomonas fluorescens Pf0-1)

0.0

47) PSEBR_a2007
( YP_004353249.1 )

DNA topoisomerase III

NC_015379
(Pseudomonas brassicacearum NFM421)

0.0

48) topB
( YP_005208735.1 )

protein TopB

NC_016830
(Pseudomonas fluorescens F113)

0.0

49) topB
( YP_002871597.1 )

DNA topoisomerase III

NC_012660
(Pseudomonas fluorescens SBW25)

0.0

50) Psyr_1473
( YP_234561.1 )

DNA topoisomerase III

NC_007005
(Pseudomonas syringae B728a)

0.0

51) AvCA_27190
( YP_007893678.1 )

DNA topoisomerase III

NC_021149
(Azotobacter vinelandii CA)

0.0

52) AvCA6_27190
( YP_007898727.1 )

DNA topoisomerase III

NC_021150
(Azotobacter vinelandii CA6)

0.0

53) Avin_27190
( YP_002799868.1 )

DNA topoisomerase III

NC_012560
(Azotobacter vinelandii DJ)

0.0

54) topB
( YP_607819.1 )

DNA topoisomerase III

NC_008027
(Pseudomonas entomophila L48)

0.0

55) topB
( YP_005929663.1 )

protein TopB

NC_017530
(Pseudomonas putida BIRD-1)

0.0

56) Pput_1814
( YP_001267151.1 )

DNA topoisomerase III

NC_009512
(Pseudomonas putida F1)

0.0

57) topB
( NP_746149.1 )

DNA topoisomerase III

NC_002947
(Pseudomonas putida KT2440)

0.0

58) YSA_08732
( YP_006388612.1 )

DNA topoisomerase III

NC_017986
(Pseudomonas putida ND6)

0.0

59) PputW619_3423
( YP_001750276.1 )

DNA topoisomerase III

NC_010501
(Pseudomonas putida W619)

0.0

60) PPS_3429
( YP_004702856.1 )

DNA topoisomerase III

NC_015733
(Pseudomonas putida S16)

0.0

61) PputGB1_3624
( YP_001669851.1 )

DNA topoisomerase III

NC_010322
(Pseudomonas putida GB-1)

0.0

62) L483_22505
( YP_008096265.1 )

DNA topoisomerase III

NC_021491
(Pseudomonas putida H8234)

0.0

63) B479_17060
( YP_007230247.1 )

DNA topoisomerase III

NC_019905
(Pseudomonas putida PC9)

0.0

64) topB
( YP_008112771.1 )

DNA topoisomerase III

NC_021505
(Pseudomonas putida NBRC 14164)

0.0

65) topB
( YP_007030014.1 )

DNA topoisomerase III

NC_019670
(Pseudomonas sp. UW4)

0.0

66) Pfl01_3364
( YP_349093.1 )

DNA topoisomerase III

NC_007492
(Pseudomonas fluorescens Pf0-1)

0.0

67) PSJM300_13290
( YP_006525078.1 )

DNA topoisomerase III

NC_018177
(Pseudomonas stutzeri DSM 10701)

0.0

68) topB
( YP_002871773.1 )

DNA topoisomerase III

NC_012660
(Pseudomonas fluorescens SBW25)

0.0

69) Psefu_3770
( YP_004475821.1 )

DNA topoisomerase III

NC_015556
(Pseudomonas fulva 12-X)

0.0

70) T1E_4226
( YP_006534849.1 )

DNA topoisomerase III

NC_018220
(Pseudomonas putida DOT-T1E)

0.0

71) Pput_2923
( YP_001268236.1 )

DNA topoisomerase III

NC_009512
(Pseudomonas putida F1)

0.0

72) A458_15255
( YP_006458701.1 )

DNA topoisomerase III

NC_018028
(Pseudomonas stutzeri CCUG 29243)

0.0

73) PputW619_3295
( YP_001750149.1 )

DNA topoisomerase III

NC_010501
(Pseudomonas putida W619)

0.0

74) Psest_1383
( YP_007239570.1 )

DNA topoisomerase III

NC_019936
(Pseudomonas stutzeri RCH2)

0.0

75) topB_1
( YP_006323613.1 )

DNA topoisomerase III

NC_017911
(Pseudomonas fluorescens A506)

0.0

76) L483_22110
( YP_008096188.1 )

DNA topoisomerase III

NC_021491
(Pseudomonas putida H8234)

0.0

77) Psyr_2244
( YP_235325.1 )

DNA topoisomerase III

NC_007005
(Pseudomonas syringae B728a)

0.0

78) topB
( YP_004715325.1 )

DNA topoisomerase III

NC_015740
(Pseudomonas stutzeri ATCC 17588)

0.0

79) PPS_2364
( YP_004701805.1 )

DNA topoisomerase III

NC_015733
(Pseudomonas putida S16)

0.0

80) L483_11955
( YP_008094177.1 )

DNA topoisomerase III

NC_021491
(Pseudomonas putida H8234)

0.0

81) topB
( NP_792290.1 )

DNA topoisomerase III

NC_004578
(Pseudomonas syringae DC3000)

0.0

82) topB1
( YP_275124.1 )

DNA topoisomerase III

NC_005773
(Pseudomonas syringae 1448A)

0.0

83) PSF113_3218
( YP_005208612.1 )

DNA topoisomerase III

NC_016830
(Pseudomonas fluorescens F113)

0.0

84) PSEBR_a1917
( YP_004353144.1 )

DNA topoisomerase III

NC_015379
(Pseudomonas brassicacearum NFM421)

0.0

85) topB
( YP_005939698.1 )

DNA topoisomerase III

NC_017532
(Pseudomonas stutzeri DSM 4166)

0.0

86) YSA_00753
( YP_006384301.1 )

DNA topoisomerase III

NC_017986
(Pseudomonas putida ND6)

0.0

87) H045_06300
( YP_007396830.1 )

DNA topoisomerase III

NC_020209
(Pseudomonas poae RE*1-1-14)

0.0

88) topB
( YP_003899109.1 )

DNA topoisomerase III

NC_014532
(Halomonas elongata DSM 2581)

6e-178

89) LF82_668
( YP_002559006.1 )

Topoisomerase B

NC_011993
(Escherichia coli LF82)

1e-177

90) NRG857_20800
( YP_006122502.1 )

DNA topoisomerase III

NC_017634
(Escherichia coli NRG 857C)

1e-177

91) topB
( YP_001173401.1 )

DNA topoisomerase III

NC_009434
(Pseudomonas stutzeri A1501)

9e-177

92) plu1037
( NP_928366.1 )

DNA topoisomerase III

NC_005126
(Photorhabdus luminescens TTO1)

3e-176

93) Ser39006_1476
( YP_008521858.1 )

DNA topoisomerase III

NC_022268
(Serratia sp. ATCC 39006)

2e-174

94) W5S_3544
( YP_006284486.1 )

DNA topoisomerase

NC_017845
(Pectobacterium sp. SCC3193)

4e-174

95) Pecwa_0618
( YP_003258049.1 )

DNA topoisomerase III

NC_013421
(Pectobacterium wasabiae WPP163)

1e-173

96) UMN179_00372
( YP_004419306.1 )

DNA topoisomerase III

NC_015460
(Gallibacterium anatis UMN179)

6e-173

97) SPAB_05347
( YP_001591453.1 )

DNA topoisomerase III

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-172

98) topB
( NP_458624.1 )

topoisomerase B

NC_003198
(Salmonella enterica CT18)

2e-171

99) STBHUCCB_44830
( YP_005219907.1 )

DNA topoisomerase

NC_016832
(Salmonella enterica P-stx-12)

2e-171

100) topB
( YP_002639895.1 )

DNA topoisomerase III

NC_012125
(Salmonella enterica RKS4594)

2e-171

101) topB
( NP_807836.1 )

DNA topoisomerase III

NC_004631
(Salmonella enterica Ty2)

2e-171

102) TY21A_21555
( YP_007928473.1 )

DNA topoisomerase III

NC_021176
(Salmonella enterica Ty21a)

3e-171

103) Spro_4107
( YP_001480330.1 )

DNA topoisomerase III

NC_009832
(Serratia proteamaculans 568)

5e-170

104) PMI2630
( YP_002152332.1 )

DNA topoisomerase III

NC_010554
(Proteus mirabilis HI4320)

6e-170

105) topB
( YP_003739129.1 )

DNA topoisomerase

NC_014304
(Erwinia billingiae Eb661)

3e-168

106) EJP617_06860
( YP_005817254.1 )

DNA topoisomerase III

NC_017445
(Erwinia sp. Ejp617)

5e-168

107) topB3
( YP_005197444.1 )

DNA topoisomerase III

NC_016816
(Pantoea ananatis LMG 5342)

3e-166

108) Spro_0310
( YP_001476548.1 )

DNA topoisomerase III

NC_009832
(Serratia proteamaculans 568)

5e-166

109) SerAS9_0272
( YP_004503695.1 )

DNA topoisomerase III

NC_015567
(Serratia plymuthica AS9)

6e-166

110) SerAS12_0272
( YP_004498743.1 )

DNA topoisomerase III

NC_015566
(Serratia sp. AS12)

6e-166

111) SerAS13_0271
( YP_006023158.1 )

DNA topoisomerase III

NC_017573
(Serratia sp. AS13)

6e-166

112) NT01EI_0325
( YP_002931802.1 )

DNA topoisomerase 3 , putative

NC_012779
(Edwardsiella ictaluri 93-146)

6e-166

113) PAGR_g3879
( YP_005994587.1 )

DNA topoisomerase III

NC_017554
(Pantoea ananatis PA13)

8e-166

114) F382_13480
( YP_008235494.1 )

DNA topoisomerase III

NC_021743
(Mannheimia haemolytica D153)

6e-165

115) J451_13720
( YP_008224058.1 )

DNA topoisomerase III

NC_021739
(Mannheimia haemolytica D174)

6e-165

116) D650_16670
( YP_007666444.1 )

DNA topoisomerase

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

6e-165

117) D648_10880
( YP_007668600.1 )

DNA topoisomerase

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

6e-165

118) N220_08395
( YP_008339123.1 )

DNA topoisomerase III

NC_021883
(Mannheimia haemolytica USMARC_2286)

6e-165

119) YPZ3_0299
( YP_003566471.1 )

DNA topoisomerase III

NC_014029
(Yersinia pestis Z176003)

3e-164

120) topB
( YP_006136654.1 )

DNA topoisomerase TopB

NC_017641
(Escherichia coli UMNK88)

2e-163

121) topA
( YP_719942.1 )

DNA topoisomerase III

NC_008309
(Haemophilus somnus 129PT)

2e-163

122) topB2
( YP_005178125.1 )

DNA topoisomerase III

NC_016809
(Haemophilus influenzae 10810)

2e-162

123) topB2
( YP_247759.1 )

DNA topoisomerase III

NC_007146
(Haemophilus influenzae 86-028NP)

2e-162

124) topB
( YP_005827298.1 )

DNA topoisomerase III

NC_017451
(Haemophilus influenzae R2866)

2e-162

125) topB
( YP_003467455.1 )

DNA topoisomerase III

NC_013892
(Xenorhabdus bovienii SS-2004)

5e-162

126) XBJ1_3377
( YP_003469259.1 )

DNA topoisomerase 3 (DNA topoisomerase III)

NC_013892
(Xenorhabdus bovienii SS-2004)

5e-162

127) PARA_12090
( YP_004822901.1 )

DNA topoisomerase III

NC_015964
(Haemophilus parainfluenzae T3T1)

9e-162

128) ECL_00407
( YP_003610922.1 )

DNA topoisomerase III

NC_014121
(Enterobacter cloacae ATCC 13047)

8e-161

129) CFSAN002050_22395
( YP_008262345.1 )

DNA topoisomerase III

NC_021818
(Salmonella enterica CFSAN002050)

3e-160

130) A79E_4459
( YP_006638219.1 )

DNA topoisomerase III

NC_018522
(Klebsiella pneumoniae 1084)

4e-159

131) topB
( YP_048644.1 )

DNA topoisomerase III

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-158

132) XNC1_3649
( YP_003713781.1 )

DNA topoisomerase III

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-158

133) A464_4533
( YP_008325124.1 )

DNA topoisomerase III

NC_021870
(Salmonella bongori N268-08)

1e-157

134) HSM_1720
( YP_001785040.1 )

DNA topoisomerase III

NC_010519
(Haemophilus somnus 2336)

3e-157

135) topB1
( YP_007884101.1 )

DNA topoisomerase 3 TopB

NC_021082
(Mannheimia haemolytica M42548)

3e-157

136) topB1
( YP_005176228.1 )

DNA topoisomerase III

NC_016808
(Pasteurella multocida 36950)

3e-157

137) B5T_02138
( YP_006820755.1 )

DNA topoisomerase III

NC_018691
(Alcanivorax dieselolei B5)

8e-157

138) XNC1_3450
( YP_003713608.1 )

DNA topoisomerase III

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-156

139) XNC1_3538
( YP_003713679.1 )

DNA topoisomerase III

NC_014228
(Xenorhabdus nematophila ATCC 19061)

9e-155

140) Mmc1_2541
( YP_866447.1 )

DNA topoisomerase III

NC_008576
(Magnetococcus marinus MC-1)

3e-144

141) Hneap_1612
( YP_003263487.1 )

DNA topoisomerase III

NC_013422
(Halothiobacillus neapolitanus c2)

4e-144

142) KP1_0634
( YP_002917557.1 )

putative DNA topoisomerase

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

5e-142

143) XNC1_p0010
( YP_003662299.1 )

putative DNA topoisomerase III

NC_014170
(Xenorhabdus nematophila ATCC 19061)

1e-140

144) ST548_p1085
( YP_007386201.1 )

DNA topoisomerase III

NC_020180
(Enterobacter aerogenes EA1509E)

2e-140

145) XNC1_2387
( YP_003712613.1 )

DNA topoisomerase III, type 1

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-140

146) topB
( YP_006142031.1 )

DNA topoisomerase III protein TopB

NC_017645
(Escherichia coli UMNK88)

3e-140

147) CFSAN001921_24100
( YP_008258077.1 )

DNA topoisomerase III

NC_021815
(Salmonella enterica CFSAN001921)

3e-140

148) topB
( YP_001101942.1 )

DNA topoisomerase III

NC_009140
(Salmonella enterica SL254)

3e-140

149) Sbal117_4706
( YP_006039708.1 )

DNA topoisomerase III

NC_017580
(Shewanella baltica OS117)

2e-138

150) Sbal117_4782
( YP_006035239.1 )

DNA topoisomerase III

NC_017578
(Shewanella baltica OS117)

6e-138

151) ASA_P4G171
( YP_001144217.1 )

DNA topoisomerase III

NC_009349
(Aeromonas salmonicida A449)

7e-138

152) Sbal_4425
( YP_001041729.1 )

DNA topoisomerase III

NC_009036
(Shewanella baltica OS155)

9e-138

153) NGK_1038
( YP_002001663.1 )

protein TopB

NC_011035
(Neisseria gonorrhoeae NCCP11945)

2e-123

154) topB
( YP_005802514.1 )

DNA topoisomerase III

NC_017390
(Erwinia pyrifoliae DSM 12163)

4e-113

155) topB
( YP_002648648.1 )

DNA topoisomerase III

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-113

156) B565_3744
( YP_004394396.1 )

DNA topoisomerase

NC_015424
(Aeromonas veronii B565)

7e-112

157) Pat9b_2192
( YP_004116059.1 )

DNA topoisomerase III

NC_014837
(Pantoea sp. At-9b)

9e-110

158) RORB6_08625
( YP_007873966.1 )

DNA topoisomerase III

NC_021066
(Raoultella ornithinolytica B6)

1e-107

159) A1122_15330
( YP_005522709.1 )

DNA topoisomerase III

NC_017168
(Yersinia pestis A1122)

1e-107

160) topB
( YP_001606772.1 )

DNA topoisomerase III

NC_010159
(Yersinia pestis Angola)

1e-107

161) topB
( YP_005505114.1 )

DNA topoisomerase III

NC_017154
(Yersinia pestis D106004)

1e-107

162) topB
( YP_005508721.1 )

DNA topoisomerase III

NC_017160
(Yersinia pestis D182038)

1e-107

163) topB
( YP_005624016.1 )

DNA topoisomerase III

NC_017265
(Yersinia pestis Harbin 35)

1e-107

164) topB
( NP_669467.1 )

DNA topoisomerase III

NC_004088
(Yersinia pestis KIM)

1e-107

165) topB
( YP_003567851.1 )

DNA topoisomerase III

NC_014029
(Yersinia pestis Z176003)

1e-107

166) YPTS_2155
( YP_001872575.1 )

DNA topoisomerase III

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-107

167) YPK_2088
( YP_001720827.1 )

DNA topoisomerase III

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-107

168) topB
( YP_001400952.1 )

DNA topoisomerase III

NC_009708
(Yersinia pseudotuberculosis IP 31758)

9e-108

169) YPA_1522
( YP_651434.1 )

DNA topoisomerase III

NC_008150
(Yersinia pestis Antiqua)

1e-107

170) topB
( YP_002347140.1 )

DNA topoisomerase III

NC_003143
(Yersinia pestis CO92)

1e-107

171) YPN_1631
( YP_647561.1 )

DNA topoisomerase III

NC_008149
(Yersinia pestis Nepal516)

1e-107

172) YPDSF_0969
( YP_001162342.1 )

DNA topoisomerase III

NC_009381
(Yersinia pestis Pestoides F)

1e-107

173) topB
( YP_003931182.1 )

DNA topoisomerase III

NC_014562
(Pantoea vagans C9-1)

2e-107

174) topB
( YP_070608.1 )

DNA topoisomerase III

NC_006155
(Yersinia pseudotuberculosis IP 32953)

2e-107

175) topB
( NP_993305.1 )

DNA topoisomerase III

NC_005810
(Yersinia pestis 91001)

4e-107

176) topB
( YP_004871418.1 )

DNA topoisomerase III

NC_016041
(Glaciecola nitratireducens FR1064)

6e-107

177) topB
( YP_005934300.1 )

DNA topoisomerase III TopB

NC_017531
(Pantoea ananatis AJ13355)

6e-107

178) topB1
( YP_005195499.1 )

DNA topoisomerase III

NC_016816
(Pantoea ananatis LMG 5342)

6e-107

179) PAGR_g1992
( YP_005992727.1 )

DNA topoisomerase III TopB

NC_017554
(Pantoea ananatis PA13)

6e-107

180) topB
( YP_001006485.1 )

DNA topoisomerase III

NC_008800
(Yersinia enterocolitica 8081)

6e-106

181) YE105_C2295
( YP_004298494.1 )

DNA topoisomerase III

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-105

182) Y11_11191
( YP_006004618.1 )

DNA topoisomerase III

NC_017564
(Yersinia enterocolitica Y11)

1e-105

183) ESA_02161
( YP_001438246.1 )

DNA topoisomerase III

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

3e-103

184) CSSP291_10255
( YP_007440925.1 )

DNA topoisomerase III

NC_020260
(Cronobacter sakazakii Sp291)

3e-103

185) topB
( YP_003210174.1 )

DNA topoisomerase III

NC_013282
(Cronobacter turicensis z3032)

3e-103

186) topB
( YP_006343395.1 )

DNA topoisomerase III

NC_017933
(Cronobacter sakazakii ES15)

4e-103

• Sequence Alignments

1) NH44784_010001 in NC_021285


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

2) topB2 in NC_007973


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

3) Plav_3385 in NC_009719


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

4) PADK2_12250 in NC_018080


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

5) PLES_27011 in NC_011770


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

6) topB in NC_017671


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1095 bits (4152),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 676/676 (100%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

7) topB in NC_017958


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score = 1094 bits (4147),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 675/676 (99%), Positives = 676/676 (100%), Gaps = 0/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120
            VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGQLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALG+LRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420
            RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480
            SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540
            VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660
            WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  661  SKRGASRPRRSGRKGS  676
            SKRGASRPRRSGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

8) NH44784_010791 in NC_021285


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  988 bits (3744),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 621/657 (95%), Positives = 642/657 (98%), Gaps = 3/657 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAATPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIELCGYR  120
            +EQLPIIPQHWRVEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYHSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MYHSALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIVVSLSAGVQAFTAHWVPPNACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL AG  +F+A+WVPP+ACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqamqqIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+MQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVTTVLDSLLKTDPSLRSIIGQLDRLQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEV TVLDSLLKTDPSLRSI+GQLDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRAHYLAQFLPHHEFDHTVAKL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAMSEKELAVYRLIR+HYLAQFLPHHEFD+TVAK+
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGGQNLAATGKQVVTPGWRQVLAEPQSEdgdgdgdTAARAQVLPA---LHEGLACQVAD  477
            SCGGQNLAATGKQVV PGWRQVLAEPQ+EDGDG+GDTA RAQVLPA   L EGLACQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  IDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  537
            +DLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  597
            RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WISQLIAQYGNASLSIKAPQGPTCPQCGAPTRQRSSKSGPFWSCSRYPDCKGTLPVE  654
            WISQLIAQYG+ASLSIK PQGP+CPQCGAPTRQRS+KSGPFWSCSRYPDCKGTLPVE
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

9) topB3 in NC_010170


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  983 bits (3724),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/676 (91%), Positives = 654/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQNWRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIELCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSASGQSFTAQWVPPDAYT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL A+G +F+AQWVPPDA T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDTGRCLQQPVaqraaqqirgagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DD+GRCL+QPVAQ++ QQIR+AGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVSTVLDSLLRTDPSLRPIMDQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEV+TVLDSLL+TDPSLR+IM+QLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAMSEKELAVYRLIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACGQQKLAATGKQVVVKGWPLVLTEPQPDE---DGDAAARSQVLPALR---EGLACLVAD  474
            +CG Q+LAATGKQVV+ GW  VL+EPQ+++   +GD+A R+QVLPAL    EGLAC VAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTLPPRPYTQGELVKSMKGVAKLVTDPRLKQKFRDTVGIGTEATRANIISGLIA  534
            VDLKALKTLPP+PYTQGELVKSMKGVAKLV+DPRLKQK++DTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGY+VKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYSIASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQY+ ASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPHRSGRQGS  670
            SKRGASRP+RSGR+GS
Sbjct  661  SKRGASRPRRSGRKGS  676

10) Bxe_A1223 in NC_007951


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  983 bits (3724),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/676 (91%), Positives = 654/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQNWRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIELCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSASGQSFTAQWVPPDAYT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL A+G +F+AQWVPPDA T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDTGRCLQQPVaqraaqqirgagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DD+GRCL+QPVAQ++ QQIR+AGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVSTVLDSLLRTDPSLRPIMDQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEV+TVLDSLL+TDPSLR+IM+QLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAMSEKELAVYRLIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACGQQKLAATGKQVVVKGWPLVLTEPQPDE---DGDAAARSQVLPALR---EGLACLVAD  474
            +CG Q+LAATGKQVV+ GW  VL+EPQ+++   +GD+A R+QVLPAL    EGLAC VAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTLPPRPYTQGELVKSMKGVAKLVTDPRLKQKFRDTVGIGTEATRANIISGLIA  534
            VDLKALKTLPP+PYTQGELVKSMKGVAKLV+DPRLKQK++DTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGY+VKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYSIASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQY+ ASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPHRSGRQGS  670
            SKRGASRP+RSGR+GS
Sbjct  661  SKRGASRPRRSGRKGS  676

11) xccb100_2412 in NC_010688


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  980 bits (3712),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 601/676 (89%), Positives = 653/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+W+VEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI V L ++G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDSGRCLqqpvaqqaaqqIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV  300
            DD+GRCL+QPVAQQ+ QQIRA+GSA+VVSVETERVREGPPLPFDLGTLQE+CSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSLLKTD SLR+I++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWND+KV+AHHGIIPTLEPA+LSAMSEKELAVY+LIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQTLTATGKQVVVKGWRLVLAEPQPEE---DSDTAARSQVLPALR---EGVSCQVAD  474
            SCG Q L+ATGKQVV+ GWR VLAEPQ+E+   ++DTA R+QVLPAL    EG++CQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTQPSRPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIISGLIA  534
            VDLKALKT P++PYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLMKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLITQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLI+QY+SASLSIKVP+GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRVASRSRRGGRKDS  670
            SKR ASR+RR+GRK+S
Sbjct  661  SKRGASRPRRSGRKGS  676

12) topB in NC_007508


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  978 bits (3707),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 599/676 (89%), Positives = 653/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+W+VEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWISPDTCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI V L ++G +F+AQW++PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDSGRCLqqpvaqqaaqqIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV  300
            DD+GRCL+QPVAQQ+ QQIRA+GSA+VVSVETERVREGPPLPFDLGTLQE+CSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSLLKTD SLR+I++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWND+KV+AHHGIIPTLEPA+LSAMSEKELAVY+LIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQTLTATGKQVVVKGWRLVLAEPQPEE---DSDTAARSQVLPALR---EGVSCQVAD  474
            SCG Q L+ATGKQVV+ GWR VLAEPQ+E+   ++DTA R+QVLPAL    EG++CQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTQPSRPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIISGLIA  534
            VDLKALKT P++PYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLMKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLITQYASASLSIKVPHGPACPQCGAPTHQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLI+QY+SASLSIKVP+GPACPQCGAPT+QRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRVASRSRRGGRKDS  670
            SKR ASR+RR+GRK+S
Sbjct  661  SKRGASRPRRSGRKGS  676

13) XC_2064 in NC_007086


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  977 bits (3703),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 600/676 (89%), Positives = 652/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+W+VEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI V L ++G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDSGRCLqqpvaqqaaqqIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV  300
            DD+GRCL+QPVAQQ+ QQIRA+GSA+VVSVETERVREGPPLPFDLGTLQE+CSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLPKTDFSLRPIIDQLDRTQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSL KTD SLR+I++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWND+KV+AHHGIIPTLEPA+LSAMSEKELAVY+LIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQTLTATGKQVVVKGWRLVLAEPQPEE---DSDTAARSQVLPALR---EGVSCQVAD  474
            SCG Q L+ATGKQVV+ GWR VLAEPQ+E+   ++DTA R+QVLPAL    EG++CQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTQPSRPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIISGLIA  534
            VDLKALKT P++PYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLMKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLITQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLI+QY+SASLSIKVP+GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRVASRSRRGGRKDS  670
            SKR ASR+RR+GRK+S
Sbjct  661  SKRGASRPRRSGRKGS  676

14) NH44784_008881 in NC_021285


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  974 bits (3689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 602/676 (90%), Positives = 643/676 (96%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVIVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCL+GSGV VTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSAQARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SA ARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCI  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F SVP+WAI VSL AGG +F+AQWVPPD+C 
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqaaqqiraagsaqVVSVETKRVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ QQIRAAGSA+VVSVET RVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRPIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR+IMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSVMSEKELAVYRLIRAHYLAQFLPHHEFDRTVAEL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LS MSEKELAVYRLIR+HYLAQFLPHHEFDRTVA +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQKLAATGKQVVAQGWRLVLAEPQADE---DGDDAARSQVLPALR---EGMACQVAE  474
            SCG Q+LAATGKQVV  GWR VLAEPQA++   +GD A R+QVLPAL    EG+ACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  AEIKALKTMPPKPYTQGELVKSMKGVAKLVTDPRLKQKLKETVGIGTEATRANIISGLIA  534
             ++KALKT+PPKPYTQGELVKSMKGVAKLV+DPRLKQKLK+TVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKKGRSIRASDAAFTLIDAVPTAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYLVKKGR+IRASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSTSLSIKVPQGPACPQCGATTRQRTGKTGPFWSCSRYPDCKGTLPVDSGT  654
            WISQLIAQYGS+SLSIKVPQGPACPQCGA TRQR+GK+GPFWSCSRYPDCKGTLPV+SG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPRTSGRKGS  670
            SKRGASRPR SGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

15) topA in NC_020815


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  974 bits (3690),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 597/676 (89%), Positives = 651/676 (97%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PEAYDEQLKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQRWQVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+W+VEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIRAALGKLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI V L ++G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDSGRCLqqpvaqqaaqqLRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDV  300
            DD+GRCL+QPVAQQ+ QQ+RA+GSA+VVSVETERVREGPPLPFDLGTLQE+CSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSLLKTD SLR+I++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIRAHYLAQFLPHHEFDRTVANL  420
            RSRAWND+KV+AHHGIIPTLEPA+LSAMSEKELAVY+LIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQTLTATGKQVVVKGWRLVLAEPQPEE---DSDTAARSQVLPALR---EGVSCQVAD  474
            SCG Q L+ATGKQVV+ GWR VLAEPQ+E+   ++DTA R+QVLPAL    EG++CQVAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  ADLKALKTQPSRPYTQGELVKSMKGVAKLISDPRLKQKLKDTVGIGTEATRANIISGLIA  534
             DLKALKT P++PYTQGELVKSMKGVAKL+SDPRLKQKLKDTVGIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLMKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLITQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLI+QY+SASLSIKVP+GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRVASRSRRGCRKDS  670
            SKR ASR+RR+ RK+S
Sbjct  661  SKRGASRPRRSGRKGS  676

16) topB2 in NC_007508


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  972 bits (3684),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 597/676 (89%), Positives = 645/676 (96%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCL+GSGVTVTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIVPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPI+PQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F SVP+WAI VSL AGG +F+AQWVPPD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpiaqqaaqqiraassaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QP+AQQ+ QQIRAA+SA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRPIMGQLDRSQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR+IMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYWLIRAHYLAQFLPHHEFDRTIAEL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAMSEKELAVY+LIR+HYLAQFLPHHEFDRT+A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQKLVATGKQVAAQGWHLVLAEPQADE---DGETTARSQVLPALR---EGLACQVAE  474
            SCG Q+L ATGKQV   GW+ VLAEPQA++   +G+T+ R+QVLPAL    EGLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  AEVKALKTLPPKPYTQGELVKSMKGVARFVTDPRLKQKLKDTTGIGTEATRANIITGLLT  534
             ++KALKTLPPKPYTQGELVKSMKGVA++V+DPRLKQKLKDT GIGTEATRANII GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYLVKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIVQYGSTSLSIKVPQGPACPQCGAPTRQRTGKTGPFWSCSRYPDCKGTLPVDSGT  654
            WISQLI QYGS+SLSIKVPQGPACPQCGAPTRQR+GK+GPFWSCSRYPDCKGTLPV+SG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPRSSGRKGS  670
            SKRGASRPR SGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

17) Ajs_1311 in NC_008782


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  965 bits (3655),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 598/676 (89%), Positives = 643/676 (96%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPQTATQFKVVKTLLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKP+TATQFKVVK+LLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIARLWLSALNDASIRTALAKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPI RLWLSALNDASIR+AL+KLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFTAQWVAPDAST  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL AGG TF+AQWV+PDA T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqaaqqiraagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ QQIRAAGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPTLAPIMGQLDRAQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDP+L +IMGQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLSAMSEKEQAVYRLIRAHYLAQFLPHHEFDRTIAEL  420
            RSRAWND+KVTAHHGIIPTLEPA+LSAMSEKE AVYRLIR+HYLAQFLPHHEFDRT+A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQKLVATGKQVAAQGWHLVLAEPQADE---DGETIARSQVLPALR---EGLACQVAE  474
            SCG Q+L ATGKQV   GW+ VLAEPQA++   +G+T  R+QVLPAL    EGLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  AEVKALKTLPPKPYTQGELVKSMKGVARFVTDPRLKQKLKDTTGIGTEATRANIITGLLT  534
             ++KALKTLPPKPYTQGELVKSMKGVA++V+DPRLKQKLKDT GIGTEATRANII GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKKGRSIRASDAALTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYLVKKGR+IRASDAA+TLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSTSLSIKVPQGPACPQCGAPTRQRTGKSGPFWSCSRYPDCKGTLPVETGT  654
            WISQLIAQYGS+SLSIKVPQGPACPQCGAPTRQR+GKSGPFWSCSRYPDCKGTLPVE+G+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPRKSGRKGS  670
            SKRGASRPR+SGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

18) Ajs_1445 in NC_008782


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  965 bits (3657),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 596/676 (89%), Positives = 643/676 (96%), Gaps = 6/676 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPQTATQFKVVKTLLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKP+TATQFKVVK+LLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIARLWLSALNDASIRTALAKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPI RLWLSALNDASIR+AL+KLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFTAQWVAPDAST  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL AGG TF+AQWV+PDA T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqaaqqiraagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ QQIRAAGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPTLAPIMGQLDRAQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDP+L +IMGQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLSAMSEKEQAVYRLIRAHYLAQFLPHHEFDRTIAEL  420
            RSRAWND+KVTAHHGIIPTLEPA+LSAMSEKE AVYRLIR+HYLAQFLPHHEFDRT+A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQKLVATGKQVAAQGWHLVLAEPQADE---DGETTARSQVLPALR---EGLACQVAE  474
            SCG Q+L ATGKQV   GW+ VLAEPQA++   +G+T+ R+QVLPAL    EGLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  AEVKALKTLPPKPYTQGELVKSMKGVARFVTDPRLKQKLKDTTGIGTEATRANIITGLLT  534
             ++KALKTLPPKPYTQGELVKSMKGVA++V+DPRLKQKLKDT GIGTEATRANII GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKKGRSIRASDAALTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  594
            RGYLVKKGR+IRASDAA+TLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIVQYGSTSLSIKVPQGPACPQCGAPTRQRTGKTGPFWSCSRYPDCKGTLPVETGT  654
            WISQLI QYGS+SLSIKVPQGPACPQCGAPTRQR+GK+GPFWSCSRYPDCKGTLPVE+G+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SKRGASRPRKSGRKGS  670
            SKRGASRPR+SGRKGS
Sbjct  661  SKRGASRPRRSGRKGS  676

19) topB1 in NC_014640


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  958 bits (3631),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 591/672 (88%), Positives = 642/672 (96%), Gaps = 3/672 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALAKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIR+AL+KLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFTAQWVAPDASA  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL AGG TF+AQWV+PDA +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpiaqqaaqqiraagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QP+AQQ+ QQIRAAGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPTLAPIMGQLDRTQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDP+L +IMGQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLSAMSEKEQAVYRLIRAHYLAQFLPHHEFDRTVADL  420
            RSRAWND+KVTAHHGIIPTLEPA+LSAMSEKE AVYRLIR+HYLAQFLPHHEFDRTVA +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQKLVATGKQVVVKGWRLVLAEPEREGSADEDGDAPRSQVLPALR---DGMACQVAG  477
            SCG Q+L ATGKQVV+ GWR VLAEP+ E++ +E++ A R+QVLPAL    +G+ACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  ADIKALKTMPPKPYTQGELVKAMKGVARFVTDPRLKQKLKDTTGIGTEATRANIISGLIA  537
             D+KALKT+PPKPYTQGELVK+MKGVA++V+DPRLKQKLKDT GIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYIVKKGRSIRASDAALTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  597
            RGY+VKKGR+IRASDAA+TLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WISQLIAQYGSTSLSIKVPQGPACPQCGAPTRQRTGKSGPFWSCSRYPACKGTLPVATGT  657
            WISQLIAQYGS+SLSIKVPQGPACPQCGAPTRQR+GKSGPFWSCSRYP CKGTLPV +G+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  658  SRRGASRPRRTS  669
            S+RGASRPRR++
Sbjct  661  SKRGASRPRRSG  672

20) topB2 in NC_010170


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  955 bits (3620),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 596/679 (88%), Positives = 641/679 (95%), Gaps = 9/679 (1%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPQTATQFKVVKTLLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKP+TATQFKVVK+LLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALAKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ  180
            GPIERLWLSALNDASIR+AL+KLRPSAETL+MY SALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFESVPYWAIDVSLSAGGQTFTAQWVAPDAST  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F SVPYWAI VSL AGG TF+AQWV+PDA T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqaaqqiraagsaqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ QQIRAAGSA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRPIMEQLDRSV  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR+IM QLDRS 
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDTKVSAHHGIIPTLEPANLSAMSEKEQAVYRLIRAHYLAQFLPHHEFDRTVAEL  420
            RSRAWND KV+AHHGIIPTLEPA+LSAMSEKE AVYRLIR+HYLAQFLPHHEFDRTVA +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  FCGQQKLVATGKQVVAKGWRLVLAEPQADE---DGDGAARSQVLPALR---DGMACQIAG  474
             CG Q+L ATGKQVV  GWR VLAEPQA++   +GD A R+QVLPAL    +G+ACQ+A+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  ADIKALKTMPPKPYTQGELVKAMKGVARFVTDPRLKQKLKDTTGIGTEATRANIISGLIA  534
             D+KALKT+PPKPYTQGELVK+MKGVA++V+DPRLKQKLKDT GIGTEATRANII+GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEGGQLTLDVFIGKQAA  594
            RGY+VKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIE+GQLTLDVFIGKQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSTSLSIKVPQGPACPQCGAPTRQRTGKSGPFWSCSRYPDCKGTLPVATGT  654
            WISQLIAQYGS+SLSIKVPQGPACPQCGAPTRQR+GKSGPFWSCSRYPDCKGTLPV +G+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  SRRGASRPRRTSGGGRKGS  673
            S+RGASRPRR+   GRKGS
Sbjct  661  SKRGASRPRRS---GRKGS  676

21) topB4 in NC_010170


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  945 bits (3580),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 569/661 (87%), Positives = 627/661 (95%), Gaps = 6/661 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTITWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCL+GSGVT+TWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARSRADWLVGMNLSRLFTLLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SALARSRADWLVGMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSAPFWAIDVSLSTEGQAFSAQWVAPDGCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F S P+WAI VSL + G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRClqqpvaqqaalqIRVADNTQVVSVETERVREGPPLLFDLSTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+  QIR A++++VVSVETERVREGPPL FDL+TLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLQIAQALYETHKATTYPRSDSGYLPESMFAEVPAVLDSLLKTDPSLRPIMSQLDRSQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP+VLDSLLKTDPSLR+IM+QLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSPLSEKELAVYRLIRAHYLAQFLPHHEFDRTVAEF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LS++SEKELAVYRLIR+HYLAQFLPHHEFDRTVA F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQMLVATGKQVVVKGWRLVLAEPQADE---DGDDAARSQVLPPLR---GGLACQVAE  474
            SCG Q L ATGKQVV+ GWR VLAEPQA++   +GD A R+QVLP+L     GLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VEIKALKTMPPKPYTQGELVKSMKGIARFVTDPRLKQKLKDTTGIGTEATRANIISVLIA  534
            V++KALKT+PPKPYTQGELVKSMKG+A++V+DPRLKQKLKDT GIGTEATRANII+ LIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFLSKQAA  594
            RGY+VKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF++KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSMSLSIKLPHGPACPQCGAATRQRTGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQYGS SLSIK+P+GPACPQCGA+TRQR+GKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  P  655
            +
Sbjct  661  S  661

22) Daci_4150 in NC_010002


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  945 bits (3580),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 569/661 (87%), Positives = 627/661 (95%), Gaps = 6/661 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTITWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCL+GSGVT+TWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARSRADWLVGMNLSRLFTLLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SALARSRADWLVGMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSAPFWAIDVSLSTEGQAFSAQWVAPDGCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F S P+WAI VSL + G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRClqqpvaqqaalqIRVADNTQVVSVETERVREGPPLLFDLSTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+  QIR A++++VVSVETERVREGPPL FDL+TLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLQIAQALYETHKATTYPRSDSGYLPESMFAEVPAVLDSLLKTDPSLRPIMSQLDRSQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP+VLDSLLKTDPSLR+IM+QLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSPLSEKELAVYRLIRAHYLAQFLPHHEFDRTVAEF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LS++SEKELAVYRLIR+HYLAQFLPHHEFDRTVA F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQMLVATGKQVVVKGWRLVLAEPQADE---DGDDAARSQVLPPLR---GGLACQVAE  474
            SCG Q L ATGKQVV+ GWR VLAEPQA++   +GD A R+QVLP+L     GLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VEIKALKTMPPKPYTQGELVKSMKGIARFVTDPRLKQKLKDTTGIGTEATRANIISVLIA  534
            V++KALKT+PPKPYTQGELVKSMKG+A++V+DPRLKQKLKDT GIGTEATRANII+ LIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFLSKQAA  594
            RGY+VKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF++KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSMSLSIKLPHGPACPQCGAATRQRTGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQYGS SLSIK+P+GPACPQCGA+TRQR+GKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  P  655
            +
Sbjct  661  S  661

23) PSTAA_1279 in NC_017532


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  945 bits (3580),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 569/661 (87%), Positives = 627/661 (95%), Gaps = 6/661 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLSGSGVTITWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCL+GSGVT+TWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARSRADWLVGMNLSRLFTLLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SALARSRADWLVGMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSAPFWAIDVSLSTEGQAFSAQWVAPDGCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F S P+WAI VSL + G +F+AQWV+PD+CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRClqqpvaqqaalqIRVADNTQVVSVETERVREGPPLLFDLSTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+  QIR A++++VVSVETERVREGPPL FDL+TLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLQIAQALYETHKATTYPRSDSGYLPESMFAEVPAVLDSLLKTDPSLRPIMSQLDRSQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP+VLDSLLKTDPSLR+IM+QLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSPLSEKELAVYRLIRAHYLAQFLPHHEFDRTVAEF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LS++SEKELAVYRLIR+HYLAQFLPHHEFDRTVA F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQMLVATGKQVVVKGWRLVLAEPQADE---DGDDAARSQVLPPLR---GGLACQVAE  474
            SCG Q L ATGKQVV+ GWR VLAEPQA++   +GD A R+QVLP+L     GLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VEIKALKTMPPKPYTQGELVKSMKGIARFVTDPRLKQKLKDTTGIGTEATRANIISVLIA  534
            V++KALKT+PPKPYTQGELVKSMKG+A++V+DPRLKQKLKDT GIGTEATRANII+ LIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFLSKQAA  594
            RGY+VKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF++KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGSMSLSIKLPHGPACPQCGAATRQRTGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQYGS SLSIK+P+GPACPQCGA+TRQR+GKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  P  655
            +
Sbjct  661  S  661

24) NCGM2_1441 in NC_017549


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  935 bits (3544),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 573/661 (87%), Positives = 627/661 (95%), Gaps = 6/661 (0%)

Query  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTITWCIGHLVEAAAPEVYDAALKRWS  60
            MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVT+TWCIGHLVEAA+PE YD  LKRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQ+WRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIERLWLSALNDASIRTALGKLRPSSDTLPMYYSALARSRADWLVGMNLSRLFTLLGRQ  180
            GPIERLWLSALNDASIR+ALGKLRPS++TL+MY SALARSRADWLVGMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIAAFKSVPFWAIDVSLSAEGQAFAAQWVAPDDCT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA F SVP+WAI VSL A G +FAAQWV+PD CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLqqpvaqqaaqqiraagsaqVVSVGTERVREGPPLLFDLSTLQEVCSRQVGLDV  300
            DDAGRCL+QPVAQQ+ QQIRAAGSA+VVSV TERVREGPPL FDL+TLQEVCS+Q+GLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLQIAQALYETHKATTYPRSDSGYLPESMFAEVPIVLDSLLNTDPSLRPIMGQLDRSQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSLL+TDPSLR+IMGQLDRSQ
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSALSEKELAVYRLIRAHYLAQFLPHHEFDRTVAEF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSA+SEKELAVYRLIR+HYLAQFLPHHEFDRTVA F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGQQTLVATGKQVVVKGWRLVLAEPQADE---DGDDTARSQVLPPLR---EGLACQVAE  474
            SCG Q L ATGKQVV+ GWR VLAEPQA++   +GD + R+QVLP+L    EGLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VEIKALKTMPAKPYTQGELVKSMKGIARFVTDPRLKQKLKDTTGIGTEATRANIISVLIA  534
            V++KALKT+P+KPYTQGELVKSMKG+A++V+DPRLKQKLKDT GIGTEATRANII+ LIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYIVKKGRSIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFLSKQAA  594
            RGY+VKKGR+IRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF++KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WISQLIAQYGCVSLSIKLSHGPACPQCGAATRQRTGKSGPFWSCSRYPDCKGTLPVESGT  654
            WISQLIAQYG  SLSIK+++GPACPQCGA+TRQR+GKSGPFWSCSRYPDCKGTLPVESG+
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  P  655
            +
Sbjct  661  S  661

25) Neut_0116 in NC_008344


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  925 bits (3503),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 537/658 (82%), Positives = 621/658 (95%), Gaps = 5/658 (0%)

Query  1    MRLFLCEKPSQGKDIGKVLGATQRDNGCLKGPGVIVTWCIGHLVEAAPPEAYDANLKHWS  60
            MRLFLCEKPSQGKDIG++LGATQR++GCL+G+GV VTWCIGHLVEAAPPEAYD +LK+WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPERWRIEVKPKTAAQFKVVKQLLAQATELVIATDADREGEMIAREIVELCGYR  120
            +EQLPIIP++WR+EVKPKTA+QFKVVK LLA+AT+LVIATDADREGE+IAREIVELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALAALKPSSETLPMYHSALARSRADWLVGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR AL+ L+PS+ETL+MYHSALARSRADWLVGMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREINQFVSIPFWAIDVALSATGQSFIAQWLAPEACT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREI +FVS+P+WAI V+L A G +F AQW++P+ACT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEAGRCLQESVAQQAAQQLRANGTAQVASVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            D+AGRCL+++VAQQ+ QQ+RA G+A+V SVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMQADVPAVLDSLLRTDPALRPVMEQLDRRQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM A+VP+VLDSLL+TDP+LR++M QLDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRAHYLAQFLPHHEFDRTIARL  420
            RSRAWND+KVTAHHGIIPTLEPA+LSAMSEKELAVYRLIR+HYLAQFLPHHEFDRT+A++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCAGQHLQAVGKQIVIPGWRLVLVeqqaedaddeaaP--RSQVLPALN---QGLSCQMNT  475
            SC+GQ+L A GKQ+VIPGWR VL E QAED+D+E+    R+QVLPAL    +GL+CQ+  
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPRPYTQGELVKAMKSVAKLVSDPRLKQKLKDTVGIGTEATRANIINGLLT  535
            VDLKALKTLPP+PYTQGELVK+MK+VAKLVSDPRLKQKLKDTVGIGTEATRANII GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLIKKGRAIRASEAAGTLIDTVPAAIADPGTTAVWEQALDMIEAGELTHDVFTGKQSA  595
            RGYL+KKGRAIRAS+AA TLID+VPAAIADPGTTAVWEQALDMIEAG+LT DVF GKQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WISQIIAQYQGTAMTIKVPQGPACPQCGSATRQRTGKNGPFWSCSRYPECKGTVPVDS  653
            WISQ+IAQY +++++IKVPQGPACPQCG++TRQR+GK+GPFWSCSRYP+CKGT+PV+S
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

26) W5S_1525 in NC_017845


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  924 bits (3499),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 522/676 (78%), Positives = 626/676 (93%), Gaps = 6/676 (0%)

Query  1    MKLFLCEKPSQGKDIGRVLGATQRGKGCLTGSGITITWCIGHLVEAAPPDAYGEQYKRWS  60
            M+LFLCEKPSQGKDIGR+LGATQRG GCL GSG+T+TWCIGHLVEAAPP+AY+EQ KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPERWRVDVKSKTASQFNVVKDLLSKASELVIATDADREGELIAREIIELCGYR  120
            +EQLPIIP++WRV+VK+KTA+QF+VVK LL+KA++LVIATDADREGELIAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALATLRPSSETLPMYFSALARSRADWLIGMNLSRLFTVMGRQ  180
            GPI+RLWLSALNDASIR AL+ LRPS+ETL+MY SALARSRADWL+GMNLSRLFTV+GRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIACFVSVPFWAVETTLSSEGQSFTAAWLAPDTAT  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIA FVSVP+WA+  +L + G +F+A W++PD+ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQESIARQAVERMRSAGSAQITSVETERMREGPPLPFDLGTLQEICSKQLGLDV  300
            DDAGRCL++++A+Q+++++R+AGSA++ SVETER+REGPPLPFDLGTLQE+CSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPDSMFAEVPTVLDSLLKTDPGLRPLVDQLDRNQ  360
            QETLEIAQALYETHKATTYPRSDSGYLP+SMFAEVPTVLDSLLKTDP+LR++++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLKAMNDKERAVYMLIRAHYLAQFLPQHEFDRTTARL  420
            RSRAWND+KVTAHHGIIPTLEPA+L AM++KE AVY LIR+HYLAQFLP+HEFDRT A++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCAGETLQAVGKQVVVIGWRQVLAEPRPDD---DGETTPRSQVLPA---LHEGLSCQITG  474
            SC+G+ L A GKQVV+ GWRQVLAEP+++D   +G+T+ R+QVLPA   L EGL+CQ+++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  IDCKALKTSPPRPYTQGELVKAMKGVAKLVADPRLKQKLKDTTGIGTEATRANIIKGLLD  534
            +D KALKT PP+PYTQGELVK+MKGVAKLV+DPRLKQKLKDT GIGTEATRANII GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLQKKGRSVRASDAAFTLIDVVPGAIADPGMTAIWEQALDMIEAGQLTLDVFIDKQSA  594
            RGYL KKGR++RASDAAFTLID VP+AIADPG TA+WEQALDMIEAGQLTLDVFI+KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WITQLVQQYQGASLSIKVPQGPACPECGTAMRQRTGKSGPFWSCPRYPDCKGSQPIDNGK  654
            WI+QL+ QY +ASLSIKVPQGPACP+CG++ RQR+GKSGPFWSC+RYPDCKG+ P+++G 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  HKRAMPRKRNSSTRAS  670
             KR+ +R R S+ ++S
Sbjct  661  SKRGASRPRRSGRKGS  676

27) Pecwa_1657 in NC_013421


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  915 bits (3465),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 521/672 (78%), Positives = 622/672 (93%), Gaps = 6/672 (0%)

Query  1    MCEKPSQGKDIGRVLGATQRGNGCLAGSGITVTWCIGHLVEAAPPETYGEQYKRWSIEQL  60
            +CEKPSQGKDIGR+LGATQRG+GCL GSG+TVTWCIGHLVEAAPPE+Y+EQ KRWS+EQL
Sbjct  5    LCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWSVEQL  64

Query  61   PIIPERWRVEVKSKTASQFNVVKNLLSKATELVIATDADREGELIAREIIELCGYHGPIQ  120
            PIIP++WRVEVK+KTA+QF+VVK LL+KAT+LVIATDADREGELIAREI+ELCGY+GPI+
Sbjct  65   PIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYRGPIE  124

Query  121  RLWLSALNDASIRKALAALRPSGETLPMYFSALARSRADWLIGMNLSRLFTVMGRQAGYD  180
            RLWLSALNDASIR AL+ LRPS+ETL+MY SALARSRADWL+GMNLSRLFTV+GRQAGYD
Sbjct  125  RLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQAGYD  184

Query  181  GVLSVGRVQTPTLKLVVDRDREIARFVSVPFWTVETVLSSAGQSFTAGWLAPDTATDDAG  240
            GVLSVGRVQTPTLKLVVDRDREIARFVSVP+W++   L ++G +F+A W++PD+ TDDAG
Sbjct  185  GVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACTDDAG  244

Query  241  RCLQEPIARQAAERMRIAGSAQVTSVETERLREGPPLPFDLGTLQEICSKQLGLDVQETL  300
            RCL++P+A+Q+ +++R AGSA+V SVETER+REGPPLPFDLGTLQE+CSKQLGLDVQETL
Sbjct  245  RCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQETL  304

Query  301  EIAQALYETHKATTYPRSDSGYLPESMFAEVPVVLDSLLKTDPGLRPIVDQLDRNQRSRA  360
            EIAQALYETHKATTYPRSDSGYLPESMFAEVP VLDSLLKTDP+LR+I++QLDR+QRSRA
Sbjct  305  EIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQRSRA  364

Query  361  WNDSKVTAHHGIIPTLEPANLTAMSDKEQAVYKLIRAHYLAQFLPQHEFDRTTACLSCTG  420
            WND+KVTAHHGIIPTLEPA+L+AMS+KE AVY+LIR+HYLAQFLP+HEFDRT A +SC G
Sbjct  365  WNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKFSCGG  424

Query  421  ETLQAVGKQIVVIGWRQVLTEPRPDE---DGETTLRSQVLPA---LHEGLSCQITGIDCK  474
            + L A GKQ+V+ GWRQVL+EP++++   +G+T++R+QVLPA   L EGL+CQ++++D K
Sbjct  425  QNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVADVDLK  484

Query  475  ALKTSPPRPYTQGELVKAMKGVAKLVSDPRLKQKLKDTTGIGTEATRANIIKGLLDRGYL  534
            ALKT PP+PYTQGELVK+MKGVAKLVSDPRLKQKLKDT GIGTEATRANII GL+ RGYL
Sbjct  485  ALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGYL  544

Query  535  LKKSRSVRASDAAFTLIDAVPGAIADPGMTAIWEQALDMIEAGQLTLDVFIDKQSAWITQ  594
            +KK+R++RASDAAFTLIDAVP+AIADPG TA+WEQALDMIEAGQLTLDVFI+KQ+AWI+Q
Sbjct  545  VKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQ  604

Query  595  LVQQYRGASLSIKVPQGPACPECGTAMRQRTGKSGPFWSCPRYPDCKGSQPIDSGKHKRA  654
            L+ QY +ASLSIKVPQGPACP+CG++ RQR+GKSGPFWSC+RYPDCKG+ P++SG  KR+
Sbjct  605  LIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGSSKRG  664

Query  655  MPRKRSRSSREP  666
             +R R  + + +
Sbjct  665  ASRPRRSGRKGS  676

28) Tola_2404 in NC_012691


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  909 bits (3443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/658 (84%), Positives = 627/658 (96%), Gaps = 5/658 (0%)

Query  1    MRLFLCEKPSQGKDIGRLLGARQRGNGCLNGPGVVVTWCIGHLVEAAPPEAYDEQLKRWT  60
            MRLFLCEKPSQGKDIGR+LGA QRG+GCLNG+GV VTWCIGHLVEAAPPEAYDEQLKRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPQHWRVEVKPKTAAQFKVVKDLLSKATELVIATDADREGELIAREIIDLCGYR  120
            +EQLPIIPQHWRVEVKPKTA+QFKVVK LL+KAT+LVIATDADREGELIAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIHAALGKLKPSGDTLPMYHSALARSRADWLVGMNLSRLFTLLGRR  180
            GPI+RLWLSALNDASI+AALGKL+PS++TL+MYHSALARSRADWLVGMNLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLRLVVDRDREIAAFVSVPFWSIEVALSCTGQTFTAQWLPPSAST  240
            AGYDGVLSVGRVQTPTL+LVVDRDREIA FVSVP+W+I V+L   G TF+AQW+PP A T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQEPvaqqavqriraagaaqMVSVETERMREGAPLPFDLGTLQEVCSKQFGLDV  300
            DDAGRCL++PVAQQ++Q+IRAAG+A++VSVETER+REG+PLPFDLGTLQEVCSKQ+GLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQSLYETHKATTYPRSDSGYLPESMHAEAPTVLDSLLKTDPSLRPIIDQLDRTQ  360
            QETLEIAQ+LYETHKATTYPRSDSGYLPESM AE PTVLDSLLKTDPSLR+I++QLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  HSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAAYRLIRAHYLAQFLPPHEFDRTTARF  420
            +SRAWND+KV+AHHGIIPTLEPA+LSAMSEKELA YRLIR+HYLAQFLP HEFDRT A+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGDQTLQAVGKHVVVPGWRLVLaepqpd--dagddaapRSQVLPA---LHQGLACQVAG  475
            SCG+Q L A GK+VV+PGWR VLAEPQ++  D+ +D+A R+QVLPA   L +GLACQVA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPRPYTQGELVKAMKSVAKLVSDPRLKQKLKDSVGIGTEATRANIIGGLLN  535
            VDLKALKTLPP+PYTQGELVK+MK+VAKLVSDPRLKQKLKD+VGIGTEATRANIIGGL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLIKKGRAIRASDAAFTLIDTVPAAIADPGTTAVWEQALDMIETGQLALDTFIDKQAA  595
            RGYL+KKGRAIRASDAAFTLID+VPAAIADPGTTAVWEQALDMIE+GQL+LD FI+KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVTQLIAQYRGTSLSIKIPEGPACPQCGGATRQRSGKSGPFWSCAKYPDCKGTLPIES  653
            W++QLIAQY ++SLSIK+P+GPACPQCG++TRQRSGKSGPFWSC++YPDCKGTLP+ES
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

29) Dd1591_0466 in NC_012912


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  907 bits (3434),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 519/672 (78%), Positives = 619/672 (93%), Gaps = 6/672 (0%)

Query  1    MRLFLCEKPSQGKDIGRVLGTTQRGNGCLTGSGITVTWCIGHLVEAAPPETYGEQYKRWS  60
            MRLFLCEKPSQGKDIGR+LG+TQRG+GCL GSG+TVTWCIGHLVEAAPPE+Y+EQ KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPECWRVEVKSKTASQFNVVKELLSKATELVIATDADREGELIAREIIELCGYR  120
            +EQLPIIP+ WRVEVK+KTA+QF+VVK LL+KAT+LVIATDADREGELIAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDTSIRKALSVLRPSDETLPMYFSALARSRADWLIGMNLSRLFTVLGRQ  180
            GPI+RLWLSALND+SIR AL+ LRPS ETL+MY SALARSRADWL+GMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPFWAVEVVLSSAGQHFTAAWLAPDTAA  240
            AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVP+WA+ V L ++G  F+A W++PD+ +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DNAGRCLQEPIARQATERMRVTGSAQVTSVETEHMREGPPLPFDLGTLQEVCSRQLGLDV  300
            D+AGRCL++P+A+Q+ +++R +GSA+V SVETE++REGPPLPFDLGTLQEVCS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPIVFDSLLKTDPDLRPIVDLLDRNQ  360
            QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVP V+DSLLKTDP LR+I++ LDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVTAHHGIIPTLEPANLAAMSDKERAVYTLIRTHYLAQFLPHHEFDHTTAYL  420
            RSRAWND+KVTAHHGIIPTLEPA+L+AMS+KE AVY LIR+HYLAQFLPHHEFD+T A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCAGEMLQAVGKQVVLVGWRRVLTEPKPDD---DGDTTSRSQVLPPLN---EGLSCQITG  474
            SC+G+ L A GKQVV+ GWR+VL+EP+++D   +GDT+ R+QVLP+L    EGL+CQ+++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  IDCKALKTSPPRPYTQGELVKSMKSVAKLVSDPRLKQTLKDTTGIGTEATRANIIKGLLD  534
            +D KALKT PP+PYTQGELVKSMK+VAKLVSDPRLKQ LKDT GIGTEATRANII GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLLKKGRSVRASDAAFTLIDAVPGAIADPGMTAIWEQALDMIESGQLTLDVFIDKQSA  594
            RGYL+KKGR++RASDAAFTLIDAVP+AIADPG TA+WEQALDMIE+GQLTLDVFI+KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WIAQLIQQYRGASLSIQMPLGPACPECGTPMHQRPGKNGAFWSCPRYPDCRGSLPIDSGK  654
            WI+QLI QY +ASLSI++P GPACP+CG+P +QR+GK+G+FWSC+RYPDC+G+LP++SG 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  RKRTTPRKRNSS  666
             KR ++R R S+
Sbjct  661  SKRGASRPRRSG  672

30) Alide2_1884 in NC_015422


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  906 bits (3433),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 524/676 (78%), Positives = 618/676 (92%), Gaps = 7/676 (1%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGCYSGASVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G++V VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIVPERWRVEPKAATVAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K+ T +QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETMPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAET+++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYNGVLSVGRVQTPTLKLVVDRDREIARFVSVPFWATEVALSHAGQTFVASWTPPQGST  240
            AGY+GVLSVGRVQTPTLKLVVDRDREIARFVSVP+WA  V+L  +G TF A W PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEAGRCLRQPVAQQAAERLRAAGTAQVLSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            D+AGRCLRQPVAQQ+ +++RAAG+A+V+SVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGHLPESMLAEVPAVLDSLVKTDPSLRPLIDRLDRQQ  360
            QETL+IAQALYETHKATTYPRSDSG LPESM+AEVP+VLDSL+KTDPSLR+++++LDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMTEKELAVYRLIRAHYLAQFLPHHEFDRTVAQL  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  TCGGQSLVAVGKQIATAGWRQVLAAPALDDTDGEDAR--RGQVLPALK---AGDACQVSQ  475
            +CGGQ+L A GKQ+  +GWRQVLA P  +D DGE+    R+QVLPAL     G ACQV++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VELKALKTLPPKPYTQGELVKAMKGVAKLVTDPRLKQKLKDTTGIGTEATRANIISGLLA  535
            V+LKALKTLPPKPYTQGELVK+MKGVAKLV+DPRLKQKLKDT GIGTEATRANII+GL+A
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLLKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEHALDMIEAGQMALDTFIAKQSS  595
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPGTTAVWE+ALDMIEAGQ++LD FI+KQ++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVARLVQQYRGATLDLKLPPAPDCPQCGAPMRQRSSKSGVFWSCSRYPDCKGTQPVEDAA  655
            W+++L+ QY +A+L +K+P +P CPQCGAP RQRS+KSG FWSCSRYPDCKGT PVE ++
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE-SG  659

Query  656  AGKRGASSRTYRAPRR  671
            ++KRGA SR  R+ R+
Sbjct  660  SSKRGA-SRPRRSGRK  674

31) topB1 in NC_006513


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  903 bits (3421),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 516/678 (77%), Positives = 629/678 (93%), Gaps = 7/678 (1%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRRNGCYSGAGIVVTWCIGHLVEAVPPEGYDERDKRWV  60
            MR+FLCEKPSQGKDI+R+LGA QR +GC +G+G+ VTWCIGHLVEA PPE+YDE+ KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIIPERWRVEPKAATAAQFKIVKQLVGQATELVIATDADREGEMIAREIIELCGYR  120
            +EQLPIIP++WRVE K+ TA+QFK+VK L+++AT+LVIATDADREGE+IAREI+ELCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GAIQRLWLSALNDASIRKALGALKSSAETLPLYYSALARSRADWLIGMNLSRLFTLLGRQ  180
            G+I+RLWLSALNDASIR ALG L++SAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVSAPFWAVEVALSHAGQPFTASWTPPEGCT  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVS P+WA+ V+L  +G  F+A W PP++CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEAGRCLQQPVAQQAAERMRATGSAQVASVETERVREGPPLPFDLGTLQELCSQQLGLDV  300
            D+AGRCL+QPVAQQ+ +++RA+GSA+V SVETERVREGPPLPFDLGTLQE+CS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPTVLDSLVKTDPSLRPLIDRLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVPTVLDSL+KTDPSLR+++++LDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWSDAKVTAHHGIIPTLEPANLSAMNDKELAVYKLIRAHYLAQFLPHHEFDRTVAEL  420
            RSRAW+D+KVTAHHGIIPTLEPA+LSAM++KELAVY+LIR+HYLAQFLPHHEFDRTVA +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACGGQSLLAVGKQIAVAGWRQVLAS--SEEGGADSDDAQRSQVLPALR---AGLSCQVGH  475
            +CGGQ+L A GKQ+ ++GWRQVLA   +E+G++++D A R+QVLPAL     GL+CQV++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELVKAMKGVARLVTDPRLKQKLKDTTGIGTEATRANIISGLLG  535
            VDLKALKTLPPKPYTQGELVK+MKGVA+LV+DPRLKQKLKDT GIGTEATRANII+GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLLTKGRAVRASDAAFTLIDTVPAAIADPGTTAVWEQALDMIEAGQMTLDAFIAKQSA  595
            RGYL+ KGRA+RASDAAFTLID+VPAAIADPGTTAVWEQALDMIEAGQ+TLD FI+KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVTQLVQQYRGTTLAIKLppspspscpQCGAPMRQRTGKSGAFWSCSRYPDCKGTLPVDT  655
            W++QL+ QY +++L+IK+  + +P+CPQCGAP RQR+GKSG+FWSCSRYPDCKGTLPV++
Sbjct  601  WISQLIAQYGSASLSIKV--PQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

Query  656  STGKRSASRKQRASPKAS  673
            +++KR+ASR +R++ K+S
Sbjct  659  GSSKRGASRPRRSGRKGS  676

32) BN117_0555 in NC_018828


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  901 bits (3412),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/661 (79%), Positives = 606/661 (92%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGYYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+G  +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYH  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGY+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYYSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAVDVLLSHAGRSFTASWIPPEGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVSVPYWA+ V L  +G +F+A W+PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPVAQQAADCIRAARDAQVVSVDTERVREAPPLPFDLGTLQEVCSKQLGLDV  300
            D AGRCL+QPVAQQ+ + IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAKVPAVLDALLATDPSLRPLIGQLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+A VP+VLD+LL TDPSLR+++GQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVTGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQ++LD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLPPTPACPQCGAPMQQRTGKSGAFWSCSRYPDCKGTLPIESPT  655
            W++QL+ QY +A+LS+K+P  PACPQCGAP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

33) PSTAB_1184 in NC_015740


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  886 bits (3354),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/661 (79%), Positives = 608/661 (92%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYSGVLSVGRVQTPTLKLVVDRDREIARFVCVPFWAIEVALSHAGQPFVASWTPPQGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFV VP+WAI V+L  +G  F A W PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQQPvaqqaadriraardaqvvSVDTERVREAPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ ++IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPAVLDALLATDPSLRPLIGQLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVP+VLD+LL TDPSLR+++GQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVSAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKV+AHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVTGWREVLATPGPDDADGED--ALRSQVLPA---LHAGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A+R+QVLPA   L  GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALRTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKAL+TLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQ++LD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLPPTPACPQCGAPMQQRTGKSGAFWSCSRYPDCRGTLPIESPT  655
            W++QL+ QY +A+LS+K+P  PACPQCGAP +QR+GKSG+FWSCSRYPDC+GTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

34) Ajs_2233 in NC_008782


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  885 bits (3351),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 522/676 (78%), Positives = 620/676 (92%), Gaps = 5/676 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGHRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGDQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA +RG+GC +G+GV VTWCIGHLVEA PPE+Y++Q KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYH  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGY+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYMGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAVDVLLSHAGRSFTASWIPPEGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVSVPYWA+ V L  +G +F+A W+PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPVAQQAADCIRAARDAQVVSVDTERVREAPPLPFDLGTLQEVCSKQLGLDV  300
            D AGRCL+QPVAQQ+ + IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPAVLDALLATDPSLRPLIGQLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVP+VLD+LL TDPSLR+++GQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKVTAHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVTGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANTINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRAN I GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQ++LD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLppapacpqcgapmqqRTGKSGAFWSCSRYPDCKGTLPIESPT  655
            W++QL+ QY +A+LS+K+P +PACPQCGAP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  GRRSAPRKRCAASKAS  671
            ++R+A+R R ++ K+S
Sbjct  661  SKRGASRPRRSGRKGS  676

35) topB in NC_009138


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  883 bits (3344),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 559/594 (95%), Positives = 580/594 (98%), Gaps = 3/594 (0%)

Query  1    MPIIPQHWRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIELCGYRGPI  60
            +PIIPQHWRVEVKPKTATQFKVVKALLAKAT+LVIATDADREGELIAREI+ELCGYRGPI
Sbjct  64   LPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYRGPI  123

Query  61   ERLWLSALNDASIRAALGKLRPSAETLPMYHSALARSRADWLVGMNLSRLFTVLGRQAGY  120
            ERLWLSALNDASIRAALGKLRPSAETL+MYHSALARSRADWLVGMNLSRLFTVLGRQAGY
Sbjct  124  ERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQAGY  183

Query  121  DGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIVVSLSAGVQAFTAHWVPPNACTDDA  180
            DGVLSVGRVQTPTLKLVVDRDREIA FVSVPYWAI VSL AG  +F+A+WVPP+ACTDDA
Sbjct  184  DGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACTDDA  243

Query  181  GRCLqqpvaqqamqqIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQET  240
            GRCL+QPVAQQ+MQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQET
Sbjct  244  GRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQET  303

Query  241  LEIAQALYETHKATTYPRSDSGYLPESMFAEVTTVLDSLLKTDPSLRSIIGQLDRLQRSR  300
            LEIAQALYETHKATTYPRSDSGYLPESMFAEV TVLDSLLKTDPSLRSI+GQLDR QRSR
Sbjct  304  LEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQRSR  363

Query  301  AWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRAHYLAQFLPHHEFDHTVAKLSCG  360
            AWNDGKVTAHHGIIPTLEPA+LSAMSEKELAVYRLIR+HYLAQFLPHHEFD+TVAK+SCG
Sbjct  364  AWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKFSCG  423

Query  361  GQNLAATGKQVVTPGWRQVLAEPQSEdgdgdgdTAARAQVLPA---LHEGLACQVADIDL  417
            GQNLAATGKQVV PGWRQVLAEPQ+EDGDG+GDTA RAQVLPA   L EGLACQVAD+DL
Sbjct  424  GQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVADVDL  483

Query  418  KALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGY  477
            KALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGY
Sbjct  484  KALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGY  543

Query  478  LVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWIS  537
            LVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWIS
Sbjct  544  LVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWIS  603

Query  538  QLIAQYGNASLSIKAPQGPTCPQCGAPTRQRSSKSGPFWSCSRYPDCKGTLPVE  591
            QLIAQYG+ASLSIK PQGP+CPQCGAPTRQRS+KSGPFWSCSRYPDCKGTLPVE
Sbjct  604  QLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

36) Tgr7_2823 in NC_011901


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  882 bits (3341),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/657 (76%), Positives = 602/657 (92%), Gaps = 5/657 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGARQRGNGCYSGSGITVTWCIGHLVEAAPPETYGEQYKQWS  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +GSG+TVTWCIGHLVEAAPPE+Y+EQ K+WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRIEVKAKTAAQFKIVKQFVAQAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WR+EVK+KTA+QFK+VK ++A+A +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALTQLKPGGETLPLYFSALARSRADWLIGMNLSRLFTVLGRR  180
            GPI+RLWLSALNDASIR AL +L+P++ETL++Y SALARSRADWL+GMNLSRLFTVLGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWTIDVTLSHAGQSFAASWMPPDGTT  240
            +GY+GVLSVGRVQTPTLKLVVDRDREIARFVSVPYW+I V+L  +G +FAA W+PPD+ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPVAQQAADRIRAGRESKVLSVETERVREAAPLPFDLGTLQEVCSRQLGLDV  300
            D AGRCL+QPVAQQ+ ++IRA+  + V+SVETERVRE++PLPFDLGTLQEVCS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQSLYETHKATTYPRSDSGYLPESMLAEVPTVLDALLATDPGLRPLIDRLDRTQ  360
            QETL+IAQ+LYETHKATTYPRSDSGYLPESM+AEVPTVLD+LL TDP+LR+++++LDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRVWNDSKITAHHGIIPTLEPANLSAMSEKELAVYALIRAHYLAQFLPHHEFDRTLVML  420
            RSR WND+K+TAHHGIIPTLEPA+LSAMSEKELAVY LIR+HYLAQFLPHHEFDRT+  +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQSLQAVGKRVIVPGWH--LALPGKGQDAADDEPAQRSQILPPLDT---GARCGVQQ  475
             C+GQ+L A GK+V++PGW+  LA P   ++ ++++ A R+Q+LP+L     G  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VELKALKTLPPKPYTQGELIKAMKGVAKLVTDPRLKQKLKETTGIGTEATRAGIINGLLA  535
            V+LKALKTLPPKPYTQGEL+K+MKGVAKLV+DPRLKQKLK+T GIGTEATRA II GL+A
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAIRASDAAFTLIDAVPAAITDPGTTAIWEQALDMIEAGQMTLDTFINKQSA  595
            RGYLVKKGRAIRASDAAFTLIDAVPAAI+DPGTTA+WEQALDMIEAGQ+TLD FI KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVAQLVQQYRGTVLSIKLPEGPACPVCGAATRQRNGKNGAFWSCSRYPDCKGTLPAE  652
            W++QL+ QY ++ LSIK+P+GPACP CGA+TRQR+GK+G+FWSCSRYPDCKGTLP E
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

37) Alide2_1747 in NC_015422


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  878 bits (3325),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/661 (79%), Positives = 610/661 (93%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKSATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCSYR  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LC+YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDVSIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALND SIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVCVPFWAIEVALSHAGQSFVASWTPPQGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFV VP+WAI V+L  +G +F A W PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQQPVAQQAVERLRTAGAAQVRSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+++++R+AG+A+V SVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPTVLDSMVKTDPSLRPLIERLDRQQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVPTVLDS++KTDPSLR+++ +LDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVSAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKV+AHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVIGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEHALDMIEAGQMALDTFIEKQAA  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWE+ALDMIEAGQ++LD FI KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLppapacpqcgapmqqRTGKSGAFWSCSRYPDCKGTLPIESPT  655
            W++QL+ QY +A+LS+K+P +PACPQCGAP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

38) Mpe_A2342 in NC_008825


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  877 bits (3320),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/661 (79%), Positives = 608/661 (92%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSDETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PS ETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVCVPFWAIEVALSHAGQSFVASWTPPQGSA  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFV VP+WAI V+L  +G +F A W PP++ +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDADRCLQQPVAQQAAEFLRAAGTAQVLSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDA+RCL+QPVAQQ+ + +RAAG+A+V+SVETERVREGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPTVLNSLVKTDPSLRPLIERLDRQQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVPTVL+SL+KTDPSLR+++ +LDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVSAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKV+AHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVIGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKLVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAKLV+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEQALDMIEAGQMTLDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQ+TLD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLppapacpqcaapmqqRTGKSGAFWSCSRYPDCKGTLPIESPT  655
            W++QL+ QY +A+LS+K+P +PACPQC+AP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

39) Alide_2714 in NC_014910


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  877 bits (3321),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 519/676 (77%), Positives = 614/676 (91%), Gaps = 5/676 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRSNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QR++GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPIVPERWRVEPKVATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K  TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAADVLLSHAGQSFTASWIPPEGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVSVPYWA  V L  +G +F+A W+PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPVAQQAVDRIRAARDAQVVSVDTERVREAPPLPFDLGTLQEVCSRQLGLDV  300
            D AGRCL+QPVAQQ++++IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPAVLDALLATEPSLRPLLGQLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVP+VLD+LL T+PSLR+++GQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVTAHHGIIPTLEPAKLLAMSEKELAVYQLIRGRYLAQFLPHHEFDRTVTQL  420
            RSRAWNDGKVTAHHGIIPTLEPAKL AMSEKELAVY+LIR++YLAQFLPHHEFDRTV+++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACGGQSLVAVGKQIAVIGWRQVLATPEPDAADGEE--AQRSQVLPPLA---SGSRCGVEQ  475
            +CGGQ+L A GKQ+ + GWRQVLA P+++ +DGE   A R+QVLP+L+    G  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VELKALRTLPPKPYTQGELVKVMKGVAKLVDDPRLKQKLKETTGIGTEATRASTIKGLLD  535
            V+LKAL+TLPPKPYTQGELVK MKGVAKLV DPRLKQKLK+T GIGTEATRA+ I GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLLKKGRAIRASDAAFTLIDAVPAAIADPGMTAIWEQALDMIEAGQMTLDTFIAKQST  595
            RGYL+KKGRAIRASDAAFTLIDAVPAAIADPG TA+WEQALDMIEAGQ+TLD FI+KQ++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVAQLVQQHRGATlsialppsppcpqcgapMRQRTGKSGAFWSCSRYPDCKGTLPVESSA  655
            W++QL+ Q  +A+LSI +P +P+CPQCGAP RQR+GKSG+FWSCSRYPDCKGTLPVES++
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  SKRGAPRKRRTVPKAS  671
            SKRGA+R RR+  K+S
Sbjct  661  SKRGASRPRRSGRKGS  676

40) DSC_04250 in NC_016147


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  873 bits (3305),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 521/677 (77%), Positives = 623/677 (93%), Gaps = 7/677 (1%)

Query  1    MRVVLCEKPSQGKDIARVLGATQRGNGCYTGSGLGVTWGIGHLIETAPPEAYGEQYKRWA  60
            MR+ LCEKPSQGKDI+R+LGATQRG+GC  GSG+ VTW IGHL+E+APPEAY+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEPLPIIPQHWQVVVKAKTATQFKVVKQLLAQATDLVIATDADREGEMIARELIDYCGYR  120
            +E LPIIPQHW+V VK+KTATQFKVVK LLA+AT+LVIATDADREGE+IARE+++ CGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSGETLPLYYSALARSRADWLIGMNLSRLFTVLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PS+ETL++Y SALARSRADWL+GMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYSGVLSVGRVQTPTLKLVVDRDREIARFVSVPFWTIEVLLAHAGQSFVANWTPPAGCT  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVSVP+W+I V L  +G +F A+W PP +CT
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQQPVAQQADERMRAAVSAQVVSVETERMREGPPLPFDLGTLQEVCSKQLGLDV  300
            DDAGRCL+QPVAQQ+ +++RAA SA+VVSVETER+REGPPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQSLYETHKATTYPRSDSGYLPENMLAEVPTVLDSLVKTDPSLRPLVAKLDPHQ  360
            QETL+IAQ+LYETHKATTYPRSDSGYLPE+M+AEVPTVLDSL+KTDPSLR+++++LD  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVTAHHGIIPTLEPANLSALNDKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWND+KVTAHHGIIPTLEPA+LSA+++KELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACAGQSLTVVGKQIVVTGWRQVLaapapdepdedaQ---RSQVLPA---LHAGLSCPIGA  474
            +C+GQ+L+  GKQ+V+ GWRQVLA P +++ D +++   R+QVLPA   L  GL+C ++ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VDLKALKTLPPKPYTQGELVKAMKGVARLVTDPRLKQKLKDTTGIGTEATRANIINgllg  534
            VDLKALKTLPPKPYTQGELVK+MKGVA+LV+DPRLKQKLKDT GIGTEATRANII GL++
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  rgyllkkgrAIRASDAAFTLIDAVPPAIADPGTTAVWEQALDMIEARQMTLDAFIAKQSA  594
            RGYL+KKGRAIRASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEA Q+TLD FI+KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WVAQLVQQYRTATLSIQLPPAPACPQCGSPMRQRTGKSGAFWSCSRYPDCKGTMAIESAT  654
            W++QL+ QY +A+LSI++P +PACPQCG+P RQR+GKSG+FWSCSRYPDCKGT+++ES++
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  GGKRSAPRKRRTAPKAS  671
             +KR+A+R RR++ K+S
Sbjct  661  -SKRGASRPRRSGRKGS  676

41) Tmz1t_0990 in NC_011662


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  853 bits (3231),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 517/661 (79%), Positives = 608/661 (92%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAVQRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLKLVVDRDREIARFVSMPYWAVDVLLSHAGQSFTASWIPPEGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVS+PYWA+ V L  +G +F+A W+PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPvaqqaadriraardaqvvSVDTERVREAPPLPFDLGTLQEVCSKQLGLDV  300
            D AGRCL+QPVAQQ+ ++IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCSKQLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMLAEVPTVLDSLVKTDPSLRPLIERLDRQQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEVPTVLDSL+KTDPSLR+++ +LDR Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVSAHHGIIPTLEPANLSAMNEKELAVYRLICAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKV+AHHGIIPTLEPA+LSAM+EKELAVYRLI +HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVTGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEQALDMIEAGQMALDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWEQALDMIEAGQ++LD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLppapacpqcgapmqqRTGKSGAFWSCSRYPDCKGTLPLESPT  655
            W++QL+ QY +A+LS+K+P +PACPQCGAP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

42) A458_06150 in NC_018028


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  837 bits (3169),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 515/661 (78%), Positives = 609/661 (93%), Gaps = 5/661 (0%)

Query  1    MRVFLCEKPSQGKDIARVLGAGQRGNGCYSGAGVVVTWCIGHLVEAVPPEGYGEQYKRWA  60
            MR+FLCEKPSQGKDI+R+LGA QRG+GC +G+GV VTWCIGHLVEA PPE+Y+EQ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IEQLPILPERWRVEPKAATAAQFKVVQQLVAKAGELVIATDADREGEMIAREIIDLCGYR  120
            +EQLPI+P++WRVE K+ TA+QFKVV+ L+AKA +LVIATDADREGE+IAREI++LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALKPSAETLPLYFSALARSRADWLIGMNLSRLFTLLGRQ  180
            GPI+RLWLSALNDASIR ALG L+PSAETL++Y SALARSRADWL+GMNLSRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYMGVLSVGRVQTPTLKLVVDRDREIARFVSMPYWAVDVLLSHAGQSFTASWIPPEGST  240
            AGY GVLSVGRVQTPTLKLVVDRDREIARFVS+PYWA+ V L  +G +F+A W+PP++ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLQQPvaqqaadriraardaqvvSVDTERVREAPPLPFDLGTLQEVCSRQLGLDV  300
            D AGRCL+QPVAQQ+ ++IRAA  A+VVSV+TERVRE+PPLPFDLGTLQEVCS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRSDSGYLPESMlaevlavldallaTDPSLRPLIGQLDRNQ  360
            QETL+IAQALYETHKATTYPRSDSGYLPESM+AEV +VLD+LL TDPSLR+++GQLDR+Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVSAHHGIIPTLEPANLSAMNEKELAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGKV+AHHGIIPTLEPA+LSAM+EKELAVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  SCGSQSLAAVGKQIAVIGWREVLATPGPDDADGED--AQRSQVLPALH---AGLSCPVGK  475
            SCG+Q+LAA GKQ+ + GWR+VLA P ++D+DGE+  A R+QVLPAL     GL+C V+ 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VDLKALKTLPPKPYTQGELIKAMKTVAKFVTDPRLKQKLRDTTGIGTEATRANIINGLIG  535
            VDLKALKTLPPKPYTQGEL+K+MK VAK+V+DPRLKQKL+DT GIGTEATRANII GLI+
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVKKGRAVRASDAAFTLIDAVPSAIADPGTTAVWEHALDMIEAGQMALDTFIEKQSV  595
            RGYLVKKGRA+RASDAAFTLIDAVP+AIADPGTTAVWE+ALDMIEAGQ++LD FI KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WVGQLVQQYRGATLSLKLppapacpqcgapmqqRTGKSGAFWSCSRYPDCKGTLPIESPT  655
            W++QL+ QY +A+LS+K+P +PACPQCGAP +QR+GKSG+FWSCSRYPDCKGTLP+ES +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  656  G  656
            +
Sbjct  661  S  661

43) XF1776 in NC_002488


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  835 bits (3163),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 522/593 (89%), Positives = 564/593 (96%), Gaps = 6/593 (1%)

Query  33   KVVKALLAKATHLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKL  92
            KVVKALLAKATHLVIATDADREGELIAREI++LCGYRGPIERLWLSALNDASIR+ALGKL
Sbjct  84   KVVKALLAKATHLVIATDADREGELIAREIVELCGYRGPIERLWLSALNDASIRAALGKL  143

Query  93   RPSSDTLPMYYSALARSRADWLVGMNLSRLFTVLGLQAGYDGVLSVGRVQTPTLKLVVDR  152
            RPS++TL+MY SALARSRADWLVGMNLSRLFTVLG QAGYDGVLSVGRVQTPTLKLVVDR
Sbjct  144  RPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDR  203

Query  153  DREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCTDDAGRCLqqpiaqqaaqqiraas  212
            DREIA F SVP+WAI VSL AGG +F+AQWVPPD+CTDDAGRCL+QP+AQQ+ QQIRAA+
Sbjct  204  DREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACTDDAGRCLRQPVAQQTMQQIRAAG  263

Query  213  saqVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSD  272
            SA+VVSVETERVREGPPL FDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSD
Sbjct  264  SAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSD  323

Query  273  SGYLPESMFAEVPTVLDSLLKTDPSLRPIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPA  332
            SGYLPESMFAEVPTVLDSLLKTDPSLR+IMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPA
Sbjct  324  SGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPA  383

Query  333  NLSAMSEKELAVYRLIRAHYLAQFLPHHEFDRTIAELSCGQQKLVATGKQVAAQGWHLVL  392
            +LSAMSEKELAVYRLIR+HYLAQFLPHHEFDRT+A +SCG Q+L ATGKQV   GW+ VL
Sbjct  384  KLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVL  443

Query  393  AEPQADE---DGETTARSQVLPALR---EGLACQVAEAEVKALKTLPPKPYTQGELVKSM  446
            AEPQA++   +G+T+ R+QVLPAL    EGLACQVA+ ++KALKTLPPKPYTQGELVKSM
Sbjct  444  AEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVADVDLKALKTLPPKPYTQGELVKSM  503

Query  447  KGVARFVTDPRLKQKLKDTTGIGTEATRANIITGLLTRGYLVKKGRSIRASDAAFTLIDA  506
            KGVA++V+DPRLKQKLKDT GIGTEATRANII GL++RGYLVKKGR+IRASDAAFTLIDA
Sbjct  504  KGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDA  563

Query  507  VPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIVQYGSTSLSIKVPQGPA  566
            VPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLI QYGS+SLSIKVPQGPA
Sbjct  564  VPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIAQYGSASLSIKVPQGPA  623

Query  567  CPQCGAPTRQRTGKTGPFWSCSRYPDCKGTLPVDSGTSKRGASRPRSSGRKGS  619
            CPQCGAPTRQR+GK+GPFWSCSRYPDCKGTLPV+SG+SKRGASRPR SGRKGS
Sbjct  624  CPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGSSKRGASRPRRSGRKGS  676

44) topB in NC_021173


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  826 bits (3129),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 475/673 (71%), Positives = 599/673 (90%), Gaps = 3/673 (0%)

Query  1    MRLFLCEKPSQGKDIARVLGAKQRGDGCFHGDAITVTWCIGHLVEAAEPDAYGEQYKSWS  60
            MRLFLCEKPSQGKDI+R+LGA QRG+GC++G ++TVTWCIGHLVEAA P+AY+EQ K WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   IDQLPIIPDPWRIEIKPKTAAQLKIVKALIAQADELVIATDADREGEMIARELLELFSYR  120
            ++QLPIIP+ WR+E+KPKTA+Q+K+VKAL+A+A +LVIATDADREGE+IARE++EL +YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRQALGALRPGSETLPLYHAALARSRADWLVGMNLSRLFTVLGRQ  180
            GPI+RLWLSALNDASIR ALG LRP++ETL++YH+ALARSRADWLVGMNLSRLFTVLGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLRLVVDRDREIARFVSVPFWTIELALSSNGQRFTAHWQAPDGST  240
            AGYDGVLSVGRVQTPTL+LVVDRDREIARFVSVP+W+I ++L + G  F+A+W +PD+ T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLQQPVAQSALATLQNARDVEVMSVDTERMREAPPLPFDLGTLQETCSRQLGLDV  300
            DDAGRCL+QPVAQ ++  ++ A   +V+SV+TER+RE+PPLPFDLGTLQE CS+QLGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRTDCGYLPESMLADVPTILTALVRTDPSLLPLIATLDPTQ  360
            QETL+IAQALYETHKATTYPR+D GYLPESM+A+VPT+L +L++TDPSL ++++ LD +Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKITAHHGIIPTLEPANLAAMSDKEQAVYRLIRAHYLAQFLPHHEFDRTVAQF  420
            RSRAWNDGK+TAHHGIIPTLEPA+L+AMS+KE AVYRLIR+HYLAQFLPHHEFDRTVA+F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ASGPERLTATGKQIAVIGWHSVLNEPASNEDTGDDSESPRSQTLPPLE---NGTRCAMEQ  477
            + G + L+ATGKQ+ + GW+ VL EP ++++ G++  + R+Q LP+L    +G  C + +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  VELKALTTQPPRPYTQGELIKAMKGVAKLVSDPRLKQILKDTTGIGTEATRASIIQGLIA  537
            V+LKAL T PP+PYTQGEL+K+MKGVAKLVSDPRLKQ LKDT GIGTEATRA+II GLIA
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYLLKKGRAVRGSDAAFTLidaipaaiadpgttaiWEQALERIEAGDMTLDAFVTRQAT  597
            RGYL+KKGRA+R+SDAAFTLIDA+PAAIADPGTTA+WEQAL+ IEAG++TLD F+ +QA+
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WVTQLVQHYAQTTLAIKlppsppcplcgsTMRQRTSQRGPFWSCTRYPDCKGTLPVEKSK  657
            W++QL+ +Y+ ++L+IK+P +P+CP CG+  RQR+++ GPFWSC+RYPDCKGTLPVE + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  658  TKRRAADTPRRGH  670
            +KR A+   R G+
Sbjct  661  SKRGASRPRRSGR  673

45) XAC29_11200 in NC_020800


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  818 bits (3096),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 466/682 (69%), Positives = 598/682 (88%), Gaps = 10/682 (1%)

Query  1    MRVVLCEKPSQGKDIARVLGAHRREAGCLGGPGITVTWGSGHLIEAAPPEAYGEHFQRWT  60
            MR+ LCEKPSQGKDI+R+LGA +R  GCL G+G+TVTW  GHL+EAAPPEAY+E+++RW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LETLPIVPPRWQWVVKARSAAQFKVVKRLLGEASELIIATDADREGEMIAREMIDYCGYR  120
            +E LPI+P +W+  VK+++A+QFKVVK LL+ A++L+IATDADREGE+IARE+++ CGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALNDASIRKAFGALRASSETLSLYHCALARSRADWLVGINLTRLFTLLGRH  180
            GP++RLWLSALNDASIR A+G LR+S+ETLS+YH ALARSRADWLVG+NL+RLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGHDGVLSVGRVQTPTLKLVVDRDREIAAFVPVPFWSIDVSLSAANVPFSAHWLAPRTAT  240
            AG DGVLSVGRVQTPTLKLVVDRDREIA FV+VP+W+I VSL A+   F+A+W++P + T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCLRQSVarhaadairaagtaQVVHTETERVREGPPLPFDLSTLQEVCSRRLGLEV  300
            DDAGRCLRQ+VA+++ + IRAAG+A+VV  ETERVREGPPLPFDL+TLQEVCS++LGL+V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRTDAGYLPENMLAEVPTVIQSLVKTDPALQPLIDRLDFRQ  360
            QETL+IAQALYETHKATTYPR+D+GYLPE+M+AEVPTV++SL+KTDP+L++++++LD  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKITAHHAIIPTLEPADISAMSAKELAVYRLIRAHYLAQFLPHHEFDRTVVRF  420
            RSRAWND+K+TAHH+IIPTLEPA +SAMS KELAVYRLIR+HYLAQFLPHHEFDRTV +F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  RCGGETLQAVGKRIAVPGWQHAFSAPSLPHVAADGADTEGSDEAPREQMLPVLQ---EGI  477
             CGG+ L A GK++ +PGW++ ++ P      A+++D EG D A R Q+LP L    EG+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQ-----AEDGDGEG-DTAVRAQVLPALPKLYEGL  474

Query  478  SCQVSALDLKSLSTKPPRPYTQGELVKAMKTVARLVTDPRLKQKLKDTTGIGTEATRANI  537
            +CQV+ +DLK+L T PP+PYTQGELVK+MK VA+LV+DPRLKQKLKDT GIGTEATRANI
Sbjct  475  ACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANI  534

Query  538  ISGLLSRGFLIRKGRAVRASDTAMMLIDAVPAAIADPGTTAIWEQALDMIEARQMGLESF  597
            I+GL++RG+L++KGRA+RASD+A  LIDAVPAAIADPGTTA+WEQALDMIEA Q+ L+ F
Sbjct  535  IGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF  594

Query  598  VEKQAAWVTQLVRQHLGTTLAIRSPEGPPCPLCGAATRQRTGRSGPFWSCSRYPDCKGTA  657
            + KQAAW++QL+ Q  +++L+I+ P+GP+CP CGA+TRQR+G+SGPFWSCSRYPDCKGT 
Sbjct  595  IGKQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

Query  658  PVAPAQAGPDGQKRSRSRGARA  679
            PV ++ ++  G  R+R  G ++
Sbjct  655  PVESG-SSKRGASRPRRSGRKG  675

46) topB in NC_003919


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  811 bits (3071),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/682 (69%), Positives = 596/682 (88%), Gaps = 13/682 (1%)

Query  1    MRVVLCEKPSQGKDIARVLGAHRREAGCLGGPGITVTWGSGHLIEAAPPEAYGEHFQRWT  60
            MR+ LCEKPSQGKDI+R+LGA +R  GCL G+G+TVTW  GHL+EAAPPEAY+E+++RW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   ---LPIVPPRWQWVVKARSAAQFKVVKRLLGEASELIIATDADREGEMIAREMIDYCGYR  117
               LPI+P +W+  VK+++A+QFKVVK LL+ A++L+IATDADREGE+IARE+++ CGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  118  GPVQRLWLSALNDASIRKAFGALRASSETLSLYHCALARSRADWLVGINLTRLFTLLGRH  177
            GP++RLWLSALNDASIR A+G LR+S+ETLS+YH ALARSRADWLVG+NL+RLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  178  AGHDGVLSVGRVQTPTLKLVVDRDREIAAFVPVPFWSIDVSLSAANVPFSAHWLAPRTAT  237
            AG DGVLSVGRVQTPTLKLVVDRDREIA FV+VP+W+I VSL A+   F+A+W++P + T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  238  DDAGRCLRQSVarhaadairaagtaQVVHTETERVREGPPLPFDLSTLQEVCSRRLGLEV  297
            DDAGRCLRQ+VA+++ + IRAAG+A+VV  ETERVREGPPLPFDL+TLQEVCS++LGL+V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  298  QETLDIAQALYETHKATTYPRTDAGYLPENMLAEVPTVIQSLVKTDPALQPLIDRLDFRQ  357
            QETL+IAQALYETHKATTYPR+D+GYLPE+M+AEVPTV++SL+KTDP+L++++++LD  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  358  RSRAWNDAKITAHHAIIPTLEPADISAMSAKELAVYRLIRAHYLAQFLPHHEFDRTVVRF  417
            RSRAWND+K+TAHH+IIPTLEPA +SAMS KELAVYRLIR+HYLAQFLPHHEFDRTV +F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  418  RCGGETLQAVGKRIAVPGWQHAFSAPSLPHVAADGADTEGSDEAPREQMLPVLQ---EGI  474
             CGG+ L A GK++ +PGW++ ++ P      A+++D EG D A R Q+LP L    EG+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQ-----AEDGDGEG-DTAVRAQVLPALPKLYEGL  474

Query  475  SCQVSALDLKSLSTKPPRPYTQGELVKAMKTVARLVTDPRLKQKLKDTTGIGTEATRANI  534
            +CQV+ +DLK+L T PP+PYTQGELVK+MK VA+LV+DPRLKQKLKDT GIGTEATRANI
Sbjct  475  ACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANI  534

Query  535  ISGLLSRGFLIRKGRAVRASDTAMMLIDAVPAAIADPGTTAIWEQALDMIEARQMGLESF  594
            I+GL++RG+L++KGRA+RASD+A  LIDAVPAAIADPGTTA+WEQALDMIEA Q+ L+ F
Sbjct  535  IGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF  594

Query  595  VEKQAAWVTQLVRQHLGTTLAIRSPEGPPCPLCGAATRQRTGRSGPFWSCSRYPDCKGTA  654
            + KQAAW++QL+ Q  +++L+I+ P+GP+CP CGA+TRQR+G+SGPFWSCSRYPDCKGT 
Sbjct  595  IGKQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

Query  655  PVAPAQAGPDGQKRSRSRGARA  676
            PV ++ ++  G  R+R  G ++
Sbjct  655  PVESG-SSKRGASRPRRSGRKG  675

47) Aave_0558 in NC_008752


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  784 bits (2969),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 462/678 (69%), Positives = 591/678 (88%), Gaps = 4/678 (0%)

Query  1    MRVVLCEKPSQGKDIARVLGARQREAGCLAGPGIKVTWGIGHLIEAAPPEAYGEHFQRWS  60
            MR+ LCEKPSQGKDI+R+LGA QR  GCL G+G+ VTW IGHL+EAAPPEAY+E+++RWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LETLPIVPQQWRWVVKADTASQFKVVQRLLAQASELIIATDADREGEMIARELIEYCGYR  120
            +E LPI+PQ+WR  VK+ TA+QFKVV+ LLA+A++L+IATDADREGE+IARE++E CGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNDASIRKALGALRASHETLPLYHCALARSHADWLVGINLTRLFTLLGRK  180
            GPI+RLWLSALNDASIR ALG LR+S ETL++YH ALARS+ADWLVG+NL+RLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGFDGVLSVGRVQTPTLKLVADRDREIAAFVPVPFWSIEVSLSAGAQAFSAHWVPPATVT  240
            AG+DGVLSVGRVQTPTLKLV DRDREIA FV+VP+W+I VSL AG+ +F+A+WVPP + T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAAGRCLqqsaaqhaaaavrtaghaqVTGIDTERVQEGPPLPFDLSTLQEVCSRRLGLDV  300
            D AGRCL+Q+ AQ++   +R+AG A+V +++TERV+EGPPLPFDL+TLQEVCS++LGLDV
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKATTYPRTDAGYLPENMLTEVPTVIRSLLKTDPALQPLMQRLDLGQ  360
            QETL+IAQALYETHKATTYPR+D+GYLPE+M++EVPTV+ SLLKTDP+L+++M +LD +Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNATKIAAHHAIIPTLEPADLSKMSEKELAVYRLIRAHYLAQFLPHYAYDRTMVRL  420
            RSRAWN  K++AHH+IIPTLEPA LS MSEKELAVYRLIR+HYLAQFLPH  +DRT+ ++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ACGGQALQASGKQVVDAGWKAAFAAPSIPGAGAETPEAETDSEAPRDQALPTLHEGMACE  480
            +CGGQ L A+GKQVV +GW+  +A P   ++++   E++T   A    ALP L EG+AC+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDG---EGDTAVRAQVLPALPKLYEGLACQ  477

Query  481  VRSLDLKSLYTKSPPPYTQGELVKAMKTVAKLVTDPRLKQTLRDTTGIGTEATRANIISG  540
            V  +DLK+L T +P PYTQGELVK+MK VAKLV+DPRLKQ L+DT GIGTEATRANII+G
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  541  LLARGFLVRKGRVVRASKTAMTLIDAVPAAIADPGTTAIWEQALHMIEARTMDLDTFVSK  600
            L+ARG+LV+KGR +RAS +A TLIDAVPAAIADPGTTA+WEQAL+MIEA  + LD F++K
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  601  QAAWVSQLVEQHREATLAIRVpagppcplcgaaTRKRTGKTGAFWSCSRYPDCKGTVAID  660
            QAAW+SQL+ Q   A+L+I+VP GP+CP CGA+TR+R+GK+G+FWSCSRYPDCKGT++++
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

Query  661  SAEAGRRNGPRKPRAARK  678
            S+ +++R ++R  R++RK
Sbjct  658  SG-SSKRGASRPRRSGRK  674

48) Pfl01_3001 in NC_007492


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  780 bits (2953),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 431/662 (66%), Positives = 555/662 (84%), Gaps = 8/662 (1%)

Query  1    MRLFLCEKPSQGRDIAKVLGATRRGDGCLIGTDSTVTWCIGHLLETAPPEAYGAQYKSWS  60
            MRLFLCEKPSQG+DI+++LGAT+RG+GCL G++ TVTWCIGHL+E+APPEAY+ Q K WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDHLPIIPAQWQVEVKSKTAAQFKIIKRLLSEASSVVIATDADREGEMIARELLELCRYR  120
            +++LPIIP +W+VEVK+KTA+QFK++K LL+ A+ +VIATDADREGE+IARE++ELC YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVLRLWLSALNEASIRKALSSLKSGQVTFPLYHSALARSRADWLIGMNLSRLFTLLGRR  180
            GP+ RLWLSALN+ASIR AL+ L+++  T+++YHSALARSRADWL+GMNLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLRLVVDRDRAIASFVPVPYWTVDVHLSSMGQRFIASWLPPRSGR  240
            AGYDGVLSVGRVQTPTL+LVVDRDR IA FV+VPYW++ V L + G  F A W+PP +  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEAGRCLQQALAHHAVQTITGEKSATVLSLQTEQLREPPPLPFDLSTLQEVCSRKLGLGV  300
            D+AGRCL+Q++A++++Q I +  SA V+S++TE++RE PPLPFDL+TLQEVCS++LGL+V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLNIAQALYETHKATTYPRSDCRYLPESMFNEAPAVLDALLKTDPALRPAFGSLDRSL  360
            QETL+IAQALYETHKATTYPRSD  YLPESMF E P+VLD+LLKTDP+LR+  G LDRS 
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RARVWNNAKVTAHHGIIPTTEPANLVRMSEQERQVYELIRSHYLAQFLPHHEFDRTQVEL  420
            R+R WN++KVTAHHGIIPT EPA+L  MSE+E  VY LIRSHYLAQFLPHHEFDRT   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ECSKERLTAVGKQILIQGWKGLLTENTEDDEPSQ-----KHQVLPVLQ---QGTQCAVND  472
             C+ + L+A GKQ++I GW+ +L+E   +D  ++     + QVLP L    +G  C V D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  473  VELKSMRTVAPKPLTEGDLIKAMKNVAKLVNDPRLKQKLRDTTGIGTEATRAGIIKGLVD  532
            V+LK+++T++PKP T+G+L+K+MK VAKLV+DPRLKQKL+DT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  533  RGYLLKKKRALMASAAAHTLIEAAPTAVADPGMTAIWEQALDEIEAGRLTLDAFVAKQAN  592
            RGYL+KK RA+ AS AA TLI+A P+A+ADPG TA+WEQALD IEAG+LTLD F++KQA 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  593  WIAQLVAHYRSHTLAIAVETSPSCPMCNASMLRRKGKSGPFWSCSCYPDCKGTVSISKDT  652
            WI+QL+A+Y S +L+I V  +P+CP C A+  +R GKSGPFWSCS YPDCKGT+++  ++
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  653  RR  654
             +
Sbjct  661  SK  662

49) PSEBR_a2007 in NC_015379


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  774 bits (2928),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 446/661 (68%), Positives = 571/661 (87%), Gaps = 6/661 (0%)

Query  1    MRLFLCEKPSQGKDIARVLGALRRGNGCYNGPGISVTWCIGHLVEAAPPEAYDERFKRWS  60
            MRLFLCEKPSQGKDI+R+LGA +RG+GC NG+G++VTWCIGHLVEAAPPEAYDE++KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDQLPIVPTNWRVDVKADTAAQYKVVKQLLAKTTELVIATDADREGEMIAREILELCHYQ  120
            ++QLPI+P +WRV+VK+ TA+Q+KVVK LLAK+T+LVIATDADREGE+IAREI+ELC Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GSIRRLWLSALNEASIRKALTGLRPADETERLYHSALARSRADWLVGMNMSRLFTLLAQR  180
            G+I RLWLSALN+ASIR AL  LRP+ ET  +YHSALARSRADWLVGMN+SRLFT+L+++
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGHHGVLSVGRVQTPTLRLVVDRDREIERFVPMHYWGIDVHLSYQEQLFLAQWVAPDCAT  240
            +G +GVLSVGRVQTPTL+LVVDRDREI RFV++ YW+I V L      F AQWV+PD  T
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGRCIRQAMAQQALQSVRQAQRAQVLDMQMDRIREAPPLPFDLGTLQEVCSRRFGLGV  300
            DDAGRC+RQ++AQQ++Q +R A  A+V+ ++ +R+RE+PPLPFDLGTLQEVCS+++GL+V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QQTLEIAQSLYETHKATTYPRSDSGYLPESMWDEASTVLDALIISDPSVEALVQSVNRQQ  360
            Q+TLEIAQ+LYETHKATTYPRSDSGYLPESM  E +TVLD+L+ +DPS+ +++  ++R Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDSKVSAHHGIIPTLEPFQIEALSEKERAVYELIRAHYLAQFLPHHEYDRSCALF  420
            RSRAWND+KV+AHHGIIPTLEP ++ A+SEKE AVY LIR+HYLAQFLPHHE+DR+ A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  TCGGHTLRAHGKQIVASGWHRALAPdsttsdddsAQ---RNQILPPLST---GSDCNVSQ  474
            +CGG+ L A GKQ+V +GW++ LA   +  +D+ ++   R Q+LP+L+    G  C+V++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VELRTLKTQAPKALTQGELIKAMKGVAKLVTDPRLKRTLKETTGIGTEATRANIISGLLN  534
            V+L++LKT +PK+ TQGEL+K+MKGVAKLV+DPRLK+ LK+T GIGTEATRANII+GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLYMKGRSVRASDAAFTLidavpaaiadpattaIWEQAFDMIENGQMTLDCFIAKQTA  594
            RGYL  KGR++RASDAAFTLIDAVPAAIADP+TTA+WEQA+DMIE GQ+TLD FI+KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WITQLVEHYRTTTLLIHTPGGPNCPLCGASMRQRQGKHGSFWSCSRYPECKGALPVVTKT  654
            WI+QL+ +Y +++L I  P GP CP CGA+ RQR GK G+FWSCSRYP+CKG+LPV + +
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  655  T  655
            +
Sbjct  661  S  661

50) topB in NC_016830


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  764 bits (2890),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 430/663 (65%), Positives = 557/663 (85%), Gaps = 9/663 (1%)

Query  1    MRLFLCEKPSQGRDIAKVLGASRRGDGCLIGRETTVTWCIGHLLETAPPEAYGDQYKTWS  60
            MRLFLCEKPSQG+DI+++LGA++RG+GCL G   TVTWCIGHL+E+APPEAY++Q K WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDHLPIIPAQWRVEVKPKTVAQFKIIKHLLSEATTVVIATDADREGEMIARELLELCNYR  120
            +++LPIIP +WRVEVKPKT +QFK++K LL+ AT +VIATDADREGE+IARE++ELC YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GSVERLWLSALNEASIRKALSSLKSSQETFPLYHSALARSRADWLIGMNLSRLFTLLGRR  180
            G++ERLWLSALN+ASIR AL+ L++S ET+++YHSALARSRADWL+GMNLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYGAVLSVGRVQTPTLRLVVERDRAIASFVSVPYWVVNAHLSSMGQQPFIASWIPPSSG  240
            AGY++VLSVGRVQTPTL+LVV+RDR IA FVSVPYW +   L + G   F A W+PP + 
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQWVPPDAC  239

Query  241  RDEAGRClqqalasqalqaisssKTATVVSLRTEHLREAPPLPFDLSTLQEVCSRKLGLG  300
             D+AGRCL+Q++A Q++Q I ++ +A VVS+ TE++RE+PPLPFDL+TLQEVCS++LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQETLNIAQALYETHKATSYPRSDCRYLPESMFNEVAAVFDALLRMDPALRPALGSIDQS  360
             QETL+IAQALYETHKAT+YPRSD  YLPESMF EV++V+D+LL+ DP+LR+ +G +D+S
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  LRSRAWNDAKVTAHHGIIPTTEPANLGRMSEQERQVYELIRSHYLAQFLPHHEFDRTEVE  420
             RSRAWND+KVTAHHGIIPT EPA+L+ MSE+E  VY LIRSHYLAQFLPHHEFDRT   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LECSAERLTAVGKQILVQGWKGLLSDNPDDDEPSQ-----KSQVLPALQ---QGRQCAVD  472
            + C+++ L+A GKQ+++ GW+ +L++   +D  ++     ++QVLPAL    +G  C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  DVELKSMRTAAPKSLTEGDLIKAMKNVAKLVNDPRLKQKLRDTTGIGTEATRAGIIKGLI  532
            DV+LK+++T +PK+ T+G+L+K+MK VAKLV+DPRLKQKL+DT GIGTEATRA II GLI
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  DRGYLLKKKRALMASATAHTLIEAVPAAVADPGMTAIWEQALDEIEAGRLSLDAFVAKQA  592
             RGYL+KK RA+ AS +A TLI+AVPAA+ADPG TA+WEQALD IEAG+L+LD F++KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  HWITQLIANCGALTLSVPVEAGPVCPICNASMLRRKGKSGPFWSCSHYPDCKGTVPISKG  652
             WI+QLIA+ G+ +LS+ V  GP CP C A+  +R GKSGPFWSCS+YPDCKGT+P+  G
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  653  IRR  655
              +
Sbjct  660  SSK  662

51) topB in NC_012660


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  759 bits (2872),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 427/662 (65%), Positives = 547/662 (83%), Gaps = 8/662 (1%)

Query  1    MRLFLCEKPSQGRDIATVLGATRRGDGCLIGTETTVTWCIGHLLETAPPEAYGIQYKNWS  60
            MRLFLCEKPSQG+DI+ +LGAT+RG+GCL G+  TVTWCIGHL+E+APPEAY+ Q K WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDHLPIIPAQWKVEVKHKTAAQFKVIKRLLSEASAVVIATDADREGEMIARELLELCNYR  120
            +++LPIIP +W+VEVK KTA+QFKV+K LL+ A+ +VIATDADREGE+IARE++ELC YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVERLWLSALNEVSILKALSSLKSGQETFPLYHSALARSRADWLIGMNLSRLFTLLGRR  180
            GP+ERLWLSALN+ SI  AL+ L+++ ET+++YHSALARSRADWL+GMNLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYDGVLSVGRVQTPTLRLVVDRDRAIASFVSVPYWDVEVHLSFMGQSFIASWLPPSSGR  240
            AGYDGVLSVGRVQTPTL+LVVDRDR IA FVSVPYW + V L   G +F A W+PP +  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEACRCLQQALARHAGQTITDGKTATVLSLQTEHFREPPPLPFDLSTLQEVCSRKLGLGV  300
            D+A RCL+Q++A+++ Q I  + +A V+S++TE+ RE PPLPFDL+TLQEVCS++LGL+V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLNIAQALYETHKATTYPRSDCRYLPASMFDEVPTVFDALLKTDSALQPAFEKLDRSL  360
            QETL+IAQALYETHKATTYPRSD  YLP SMF EVPTV+D+LLKTD++L++   +LDRS 
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKATAHHGIIPTTEPANLARMSEQERQVYEQIRNHYLAQFLPHHEFDRTQVEL  420
            RSRAWND+K TAHHGIIPT EPA+L+ MSE+E  VY  IR+HYLAQFLPHHEFDRT   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  ECGKERLTAVGKQILVQSWKGLLYDNTEDDEPSQ-----KFQVLPVLQ---QGTQCAVND  472
             CG + L+A GKQ+++ +W+ +L +   +D  ++     + QVLP L    +G  C V D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  473  VELKSMRTTAPKPLTEGDLIKAMKNVAKLVNDPRLKQKLRDTTGIGTEATRAGIIKGLID  532
            V+LK+++T +PKP T+G+L+K+MK VAKLV+DPRLKQKL+DT GIGTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  533  RGYLLKKKRALMASAAAHTLIEAVPAAIADPGMTAIWEQALDEIEAGRLSLDAFVAKQAS  592
            RGYL+KK RA+ AS AA TLI+AVPAAIADPG TA+WEQALD IEAG+L+LD F++KQA+
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  593  WIAQLVEHCRALTLALPVETGPACPICNASMLRRTGKSGAFWSCSHYPDCKGTVPISKDI  652
            WI+QL+ +  + +L++ V  GPACP C A+  +R+GKSG+FWSCS+YPDCKGT+P+  + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  653  RR  654
             +
Sbjct  661  SK  662

52) Psyr_1473 in NC_007005


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  751 bits (2842),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 415/659 (63%), Positives = 548/659 (84%), Gaps = 7/659 (1%)

Query  1    MRLYLCEKPSQGKDIAAVLGAKTRGDGCIKGNGVAVTWGIGHLLETAPPDAYGEHLKNWS  60
            MRL+LCEKPSQGKDI+ +LGA  RG+GC++G+GV+VTW IGHL+E+APP+AY+E+LK WS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDTLPILPAEWKVLVKPKTASQFKIVKQLLKQATELVIATDADREGEMIARELIEYCGYR  120
            ++ LPI+P +W+V VKPKTA+QFK+VK LL +AT+LVIATDADREGE+IARE++E CGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALNEASIRQALNTVKQGSETYPLYLSALARSRADWLIGMNFSRLFTLLGRQ  180
            GPI+RLWLSALN+ASIR AL  ++ ++ET ++Y SALARSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGYTGVLSVGRVQTPTLRLVVDRDRDISNFIPKPFWSVEVQLWTAGQSFLAKWVADEYLV  240
            AGY GVLSVGRVQTPTL+LVVDRDR+I+ F++ P+W++ V L ++G +F A+WV+ +   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DEEGRCLDqaaaaaalaalkssqaasTVSVDTKRGKDPAPLPFDLSTLQEVCSAKFGMGV  300
            D+ GRCL Q+ A  ++  ++++ +A  VSV+T R ++ +PLPFDL+TLQEVCS ++G++V
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDVAQSLYETHKATTYPRTDCGYLPESMFDEVPMVLDALNRTDPSIGKTLQLIDPEQ  360
            QETL++AQ+LYETHKATTYPR+D GYLPESMF EVP VLD+L +TDPS+   +  +D  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDKKITGPHHGIIPTLEPANLSAMSEKERKVYELIRAHFLAQFLPTHEYDRTVAT  420
            RSRAWND K+T+ HHGIIPTLEPA+LSAMSEKE  VY LIR+H+LAQFLP HE+DRTVA 
Sbjct  361  RSRAWNDGKVTA-HHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FECNAVLLQAVGKRIVIPGWKVLFSASSEEEANDSGG---RSQILPVLQI---GTRCDVQ  474
            F C +  L A GK++VIPGW+ +++ +  E++++ G+   R+Q+LP L     G  C+V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  475  DLHLKSLKTEPPKAYTEGTLIKAMKTIAKLVKDPRLAQKLKETTGIGTEATRAGTIQGLI  534
            D++LK+LKT PPK+YT+G L+K+MK +AKLV DPRL QKLK+T GIGTEATRA  I GLI
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  535  DRGSLIKKGSALRATEAAFSLIDAVPPAVADPGTTAIWEQALTMIEQGTLTLDDFIARQS  594
             RG L+KKG A+RA++AAF+LIDAVP+A+ADPGTTA+WEQAL MIE G LTLD FI++Q+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  595  SWITRLVEQYKGTTLSIKVPEGPKCPLCSAKTSQRKGSSGVFWACSRYPECKGTVNIGT  653
            +WI++L+ QY +++LSIKVP+GP CP C+A T QR G SG FW+CSRYP+CKGT+ + +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

53) AvCA6_27190 in NC_021150


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  703 bits (2658),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 390/616 (64%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  4    MRLFLCEKPSQAKDIAKVLQATRRGDGCWLGPDLAVTWCIGHLLETAPPDAYDARYKRWD  63
            MRLFLCEKPSQ+KDI+++L AT+RG+GC  G++++VTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  64   LSDLPIVPEHWKMLVKPKTASQYKVIKRLLGECRELIIATDADREGEMIARELVEHCRYR  123
            + +LPI+P+HW++ VKPKTA+Q+KV+K LL+   +L+IATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  124  GPIRRLWLSALDDASIRKALAALKPGTETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  183
            GPI RLWLSAL+DASIR AL+ L+P++ET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  184  SGYQGVLSVGRVQTPTLRLVVDRDRSIADFVPVPWWAIEVQLLAEGTPFTAQWRAPEDAC  243
            +GY+GVLSVGRVQTPTL+LVVDRDR IA FV+VP WAI V L+A G+ F+AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  244  DDQGRCLKQELAQQAAQDMRHAGSARLVALKTERIREMPPLPFDLGTLQEICSKKLGLGA  303
            DD GRCL+Q +AQQ+ Q++R AGSA++V++ TER+RE PPLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  304  QETLDIAQALYETHKVITYPRSDCGYLPQSQHGEAPAILAALERTDPALAGLMHHIDPRR  363
            QETL+IAQALYETHK  TYPRSD GYLP+S  +E P++L +L +TDP+L ++M ++D  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  364  RSRAWNDARVGAHHGIIPTAAAQSLDRLVGKQCAVYTLIRARYLAQFLPNHEYDRTQADF  423
            RSRAWND++V AHHGIIPT  +  L  +  K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  424  DCAGHALRAVGKRIVEPGWRRALPEALTP---AKGRETPPSQELPALR---EGQDCAVAE  477
             C+G+ L A GK++V PGWR+ L+E+ +    + G  +  +Q LPAL    EG  C VA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  VTLKDLWTQPPKPYTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQALIE  537
            V LK L T PPKPYT+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II +LI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYLLKQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMSLEAFVAKQSA  597
            RGYL+K+G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G+++L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WMSKLIERCAGLRLTI  613
            W+S+LI + ++  L+I
Sbjct  601  WISQLIAQYGSASLSI  616

54) AvCA_27190 in NC_021149


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  703 bits (2658),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 390/616 (64%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  4    MRLFLCEKPSQAKDIAKVLQATRRGDGCWLGPDLAVTWCIGHLLETAPPDAYDARYKRWD  63
            MRLFLCEKPSQ+KDI+++L AT+RG+GC  G++++VTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  64   LSDLPIVPEHWKMLVKPKTASQYKVIKRLLGECRELIIATDADREGEMIARELVEHCRYR  123
            + +LPI+P+HW++ VKPKTA+Q+KV+K LL+   +L+IATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  124  GPIRRLWLSALDDASIRKALAALKPGTETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  183
            GPI RLWLSAL+DASIR AL+ L+P++ET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  184  SGYQGVLSVGRVQTPTLRLVVDRDRSIADFVPVPWWAIEVQLLAEGTPFTAQWRAPEDAC  243
            +GY+GVLSVGRVQTPTL+LVVDRDR IA FV+VP WAI V L+A G+ F+AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  244  DDQGRCLKQELAQQAAQDMRHAGSARLVALKTERIREMPPLPFDLGTLQEICSKKLGLGA  303
            DD GRCL+Q +AQQ+ Q++R AGSA++V++ TER+RE PPLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  304  QETLDIAQALYETHKVITYPRSDCGYLPQSQHGEAPAILAALERTDPALAGLMHHIDPRR  363
            QETL+IAQALYETHK  TYPRSD GYLP+S  +E P++L +L +TDP+L ++M ++D  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  364  RSRAWNDARVGAHHGIIPTAAAQSLDRLVGKQCAVYTLIRARYLAQFLPNHEYDRTQADF  423
            RSRAWND++V AHHGIIPT  +  L  +  K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  424  DCAGHALRAVGKRIVEPGWRRALPEALTP---AKGRETPPSQELPALR---EGQDCAVAE  477
             C+G+ L A GK++V PGWR+ L+E+ +    + G  +  +Q LPAL    EG  C VA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  VTLKDLWTQPPKPYTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQALIE  537
            V LK L T PPKPYT+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II +LI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYLLKQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMSLEAFVAKQSA  597
            RGYL+K+G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G+++L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WMSKLIERCAGLRLTI  613
            W+S+LI + ++  L+I
Sbjct  601  WISQLIAQYGSASLSI  616

55) Avin_27190 in NC_012560


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  703 bits (2658),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 390/616 (64%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  4    MRLFLCEKPSQAKDIAKVLQATRRGDGCWLGPDLAVTWCIGHLLETAPPDAYDARYKRWD  63
            MRLFLCEKPSQ+KDI+++L AT+RG+GC  G++++VTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  64   LSDLPIVPEHWKMLVKPKTASQYKVIKRLLGECRELIIATDADREGEMIARELVEHCRYR  123
            + +LPI+P+HW++ VKPKTA+Q+KV+K LL+   +L+IATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  124  GPIRRLWLSALDDASIRKALAALKPGTETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  183
            GPI RLWLSAL+DASIR AL+ L+P++ET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  184  SGYQGVLSVGRVQTPTLRLVVDRDRSIADFVPVPWWAIEVQLLAEGTPFTAQWRAPEDAC  243
            +GY+GVLSVGRVQTPTL+LVVDRDR IA FV+VP WAI V L+A G+ F+AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  244  DDQGRCLKQELAQQAAQDMRHAGSARLVALKTERIREMPPLPFDLGTLQEICSKKLGLGA  303
            DD GRCL+Q +AQQ+ Q++R AGSA++V++ TER+RE PPLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  304  QETLDIAQALYETHKVITYPRSDCGYLPQSQHGEAPAILAALERTDPALAGLMHHIDPRR  363
            QETL+IAQALYETHK  TYPRSD GYLP+S  +E P++L +L +TDP+L ++M ++D  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  364  RSRAWNDARVGAHHGIIPTAAAQSLDRLVGKQCAVYTLIRARYLAQFLPNHEYDRTQADF  423
            RSRAWND++V AHHGIIPT  +  L  +  K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  424  DCAGHALRAVGKRIVEPGWRRALPEALTP---AKGRETPPSQELPALR---EGQDCAVAE  477
             C+G+ L A GK++V PGWR+ L+E+ +    + G  +  +Q LPAL    EG  C VA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  478  VTLKDLWTQPPKPYTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQALIE  537
            V LK L T PPKPYT+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II +LI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  538  RGYLLKQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMSLEAFVAKQSA  597
            RGYL+K+G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G+++L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  598  WMSKLIERCAGLRLTI  613
            W+S+LI + ++  L+I
Sbjct  601  WISQLIAQYGSASLSI  616

56) topB in NC_008027


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  694 bits (2624),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 390/616 (64%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGAQRRGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWS  60
            MRLFLCEKPSQ+KDI+++LGA +RG+GC +G++V VTWCIGHL+E+APP++YDE+ KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDDLPIIPEKWKMTVKPKTASQYKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            +++LPIIP+ W++ VKPKTA+Q+K VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALARLLPGQETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLESAGNVFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L ++G+ F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQALAQQAAHDMQAAGSARVMKIATERVRETAPLPFDLGTLQEVCSKKLGLGA  300
            DD GRCL+Q++AQQ+ ++++AAGSA+V+ + TERVRE +PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDSGYLPLSQHGEAPGILAALQRADASLAPLQPYLDPQR  360
            QETL+IAQALYETHK  TYPRSDSGYLP S  +E P +L +L ++D+SL ++   LD  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDQKVSAHHGIIPTAAASDPSRLPPKYKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND KV+AHHGIIPT  ++  S ++ K  AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHTLRAVGKQIIEPGWRRALPEALMPQ---KGREAPPAQVLPALR---EGQDCAVQG  474
             C+G+ L A GKQ++ PGWR+ L+E+   +    G  A  AQVLPAL    EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQNGEMSLDEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM++ G+++LD F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVQRCSGMRLTI  610
            W+++L+ + ++  L+I
Sbjct  601  WISQLIAQYGSASLSI  616

57) topB in NC_017530


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  694 bits (2623),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/616 (63%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G+++ VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQSLAQQAATDIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL+Q++AQQ+  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILSALQRADASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCNVHG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C+V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMPLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++ L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

58) Pput_1814 in NC_009512


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  694 bits (2625),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/616 (63%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G+++ VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDVC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQDLAQRAATDIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL+Q +AQ++  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCNVNG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C+V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMTLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++TL+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

59) topB in NC_002947


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  694 bits (2623),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/616 (63%), Positives = 514/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G+++ VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQSLAQQAAADIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL+Q++AQQ+  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCNVHG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C+V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMPLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++ L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

60) YSA_08732 in NC_017986


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  693 bits (2621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 383/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDICVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G+++ VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPVPFWAIDVQLEHAGQRFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQDLAQRAATDIGHAGTARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL+Q +AQ++  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCNVNG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C+V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMPLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++ L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

61) PputW619_3423 in NC_010501


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  693 bits (2619),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/619 (63%), Positives = 516/619 (84%), Gaps = 6/619 (0%)

Query  1    MRLFLCEKPSQAKDIAKILGANRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI++ILGA ++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPEKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALARLLPGQDTFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL++L P+ +T+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIEVQLEHAGLVFNAQWRAPEGIC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P++  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNQALAQQAATDIGNARSARVLKVTTERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL Q++AQQ+  +I  A SA+V+ V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPVSQHSEAPAILTALQRVDSSLAPLQAHLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  +E P++L +L + D+SL ++ ++L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVTAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQAEF  420
            RSRAWND+KVTAHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALAP---AKGREAPPAQVLPT---LCESQDCSVQG  474
             C+G+ L A GKQ+V PGWR+ L+E+ A    + G  A  AQVLP+   L E+  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALAATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEDFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTINGP  613
            W+++L+ + ++  ++I+ P
Sbjct  601  WISQLIAQYGSASLSIKVP  619

62) PPS_3429 in NC_015733


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  692 bits (2615),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPEKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRGIADFVPVPFWAIDVQLEHAGFGFNAQWRAPDDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNQALAQQAAVDIGNAGTARAVKVTTERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL Q++AQQ+  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRSDASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCTVQG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMTLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++TL+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

63) PputGB1_3624 in NC_010322


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  691 bits (2613),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 383/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIEVQLEHAAQRFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  ++  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLKQDLAQQAATDIGNAATARAVKVATERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL+Q +AQQ+  +I  A++A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLTPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPA---LCEGQDCTVHG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPA   L EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALAATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMTLEEFVARQST  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++TL+ F+++Q++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

64) L483_22505 in NC_021491


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  689 bits (2605),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/616 (63%), Positives = 511/616 (83%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGATRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGAT++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDTWKMLVKPKTASQFKAVKRLLGEARELIIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +L+IATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDTSIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+D+SIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLEHAGQRFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNQGLAQQAATAIGNAGTARAVKVTTERMREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL Q +AQQ+   I  AG+A+ V V TER+RE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRADASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPVLR---EGQDCTVQG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLP L    EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALAATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

65) B479_17060 in NC_019905


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  684 bits (2588),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 387/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGA ++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPEKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+DASIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLEHAGFGFNAQWRAPDDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G  F AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNqalaqqaaaDIGNAGTARAVKVTTERVREAAPLPFDLGTLQELCSKKFGLGA  300
            DD GRCL Q++AQQ+  +I  AG+A+ V V TERVRE++PLPFDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPQSQHAEAPAILAALQRSDASLAPLQPYLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP+S  AE P++L +L ++D+SL ++   L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALR---EGQDCTVQG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL    EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMTLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G++TL+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

66) topB in NC_021505


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  677 bits (2560),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGATRKGDGCWQGTDVCVTWCIGHLLETAPPDSYDERYKRWN  60
            MRLFLCEKPSQ+KDI+++LGAT++G+GC +G++V VTWCIGHL+E+APP++YDE+ KRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMLVKPKTASQFKAVKRLLGEARELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDTSIRKALARLLPGHETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GP++RLWLSAL+D+SIR AL++L P+ ET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVQLEHAGQAFNAQWRAPEDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V L  +G +F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNQSLaqqaaaaignagtaraVKVTTERVREAAPLLFDLGTLQELCSKKFGLGA  300
            DD GRCL Q++AQQ+   I  AG+A+ V V TERVRE++PL FDLGTLQE+CSK++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPLSQHAEAPAILAALQRADAGLAPLQPHLEPQR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  AE P++L +L ++D++L ++  +L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRVWNDAKVSAHHGIIPTAAASDPSRLPAKHKAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSR WND+KV+AHHGIIPT  ++  S ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKQIVEPGWRRALPEALTP---AKGREAPPAQVLPALS---EGQDCTVQG  474
             C+G+ L A GKQ+V PGWR+ L+E+ +    + G  A  AQVLPAL+   EG  C V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  LQLKDLWTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKETTGIGTEATRASIIQGLLD  534
            ++LK L T PPKP+T+G+L+K+MK VAKLV DPRLKQKLK+T GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALAATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVARQSA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+++Q+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMGKLVERCSGMRMTI  610
            W+++L+ + ++  ++I
Sbjct  601  WISQLIAQYGSASLSI  616

67) topB in NC_019670


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/616 (63%), Positives = 513/616 (84%), Gaps = 6/616 (0%)

Query  1    MRLYLCEKPSQAKDIAAVLGARRRGDGCWLGTDVTVTWCIGHLLETAPPDAYDARYKRWV  60
            MRL+LCEKPSQ+KDI+ +LGA +RG+GC  G++VTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPEKWKMTVKPRTASQYKAVKRLLGEAAELVIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKP+TA+Q+K VK LL+ A++LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDDASIRKALAALKPGNETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL+DASIR AL+ L+P+ ET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPYWAIDVQLLHNGTAFTAQWRAASEVC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VPYWAI V L+  G++F+AQW ++    
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQDRCLNqalaqqaadamrgaasaRVIKLRTERMREVAPLPFDLGTLQEVCSKKLGLGA  300
            DD +RCL Q++AQQ+ + +R+A+SA+V+ + TER+RE +PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETYKVITYPRSDCGYLPLSQHNEAPAILAALRQADPALNTLHDHLDPQR  360
            QETL+IAQALYET K  TYPRSD GYLP S   E P++L +L ++DP+L ++ ++LD  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAAKNLDKLAGKQRAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  + +L  ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKQIIEQGWKRALPEALAATKGREAPAP------QTLPNLAEGIDCAVAG  474
             C+GQ L A GKQ++  GW++ L+E+ A   + E+ ++       +LP+L EG+ C VA+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VQLKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLLD  534
            V+LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALAATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVTKQAA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+ KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMSKQVSRCAGLSLTI  610
            W+S+ +++ ++ SL+I
Sbjct  601  WISQLIAQYGSASLSI  616

68) Pfl01_3364 in NC_007492


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  675 bits (2552),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/616 (63%), Positives = 508/616 (83%), Gaps = 6/616 (0%)

Query  1    MRLYLCEKPSQAKDIAAVLGAKRRGDGCWLGTDVTVTWCIGHLLETAPPDAYDAKYKRWV  60
            MRL+LCEKPSQ+KDI+ +LGA +RG+GC  G++VTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIIPDKWKMTVKPRTASQYKAVKRLLGEASELIIATDADREGEMIARELVEHCRYR  120
            + +LPIIP+ W++ VKP+TA+Q+K VK LL+ A++L+IATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDEASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL++ASIR AL+ L+P+AET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVQLLHGDTPFNAQWRAPNDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+V+YWAI V L+ G++ F AQW +P+   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQDRCLNqalaqqaaaaissaasaRVVKLRTERMREVAPLPFDLGTLQEVCSKKLGLGA  300
            DD +RCL Q++AQQ+   I +A+SA+VV + TER+RE +PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETYKVITYPRSDCGYLPLSQHNEAPGILAALRQADPSLEALREHLEPQR  360
            QETL+IAQALYET K  TYPRSD GYLP S   E P +L +L ++DPSL ++  +L+  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAAKNLERLTGKHRAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  + +L  ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGEALRAVGKQIIEPGWKRALPEALAPAKGREAPAP------QTLPTLTQGAECAVAD  474
             C+G+ L A GKQ++ PGW++ L+E+ A   + E+ ++       +LP L +G  C VAD
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VKLKDLWTQPPKPYTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLLD  534
            V LK L T PPKPYT+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA+II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVTKQAA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+ KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMSKQVTRCAGLSLTI  610
            W+S+ +++ ++ SL+I
Sbjct  601  WISQLIAQYGSASLSI  616

69) PSJM300_13290 in NC_018177


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  673 bits (2544),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/616 (63%), Positives = 504/616 (82%), Gaps = 6/616 (0%)

Query  1    MRLFLCEKPSQAKDIAKVLGANRRGDGCWLGPGVTVTWCIGHLLETAPPDAYDARYKRWV  60
            MRLFLCEKPSQ+KDI+++LGA +RG+GC  G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LGDLPIVPERWKMLVKPKTASQFKAVKRLLGEACELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P++W++ VKPKTA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLMGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+AET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPYWTIEVALQAGDIPFTAQWRAAEDRC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VPYW+I V+L AG+  F+AQW +++   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLDPEHarqaaaaigsatqaLVVKLRTERMREAPPLPFDLGTLQEICSKKLGLGA  300
            DD GRCL    A+Q+   I +A  A VV + TER+RE+PPLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQSLYEIHKLITYPRSDCGYLPLSQHGEAPAIIAALGRSDPSLSELLTLVQPQR  360
            QETL+IAQ+LYE HK  TYPRSD GYLP S  +E P+++ +L ++DPSL  ++  ++  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDGKVGAHHGIIPTAAATDLSRLAGKQRAVYTLVRARYLAQFLPNHEYDRTQADF  420
            RSRAWNDGKV AHHGIIPT  ++ LS ++ K+ AVY L+R++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKVIVEPGWRRALPEALTP---AKGREPTPAQALPPLS---EGQHCNVMG  474
             C+GQ L A GK +V PGWR+ L+E+ +    + G  +  AQ LP+L+   EG  C+V +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VNLKDLWTQPPKPFTEGDLIKAMKNVARLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLD  534
            V+LK L T PPKP+T+G+L+K+MK VA+LV DPRLKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLSKQGKALSASPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQSA  594
            RGYL K+G+A+ AS AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMSKQVERCRDLRLTI  610
            W+S+ + +     L+I
Sbjct  601  WISQLIAQYGSASLSI  616

70) topB in NC_012660


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 381/623 (62%), Positives = 507/623 (82%), Gaps = 6/623 (0%)

Query  1    MRLYLCEKPSQAKDIAAVLGASRRGDGCWLGNGITVTWCIGHLLETAPPDAYDAKYKRWV  60
            MRL+LCEKPSQ+KDI+ +LGA++RG+GC  G+G+TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPEKWKMLVKPKTASQFKVVKRLLGEAQELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P+ W++ VKPKTA+QFKVVK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+AET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVDLHHERMTFTAQWRAAEEAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+V+YWAI V L     TF+AQW +++   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLNPQLardaadamanaatarLVKLRTERMREVAPLPFDLGTLQEICSKKLGLGA  300
            DD GRCL   +A+++ + +  A++A++V + TER+RE +PLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQSLYETHKVITYPRSDCGYLPVSQHSEAPKILAALGRADAAVNALMPHIDPQR  360
            QETL+IAQ+LYETHK  TYPRSD GYLP S  +E P +L +L ++D+++ ++M ++D  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTGAGKEVGQLTGKHRAVYTLIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT     ++ ++ K+ AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKVVIEPGWKRALPEALTPAKGRE------APVPQALPTLVQGQDYAVAK  474
             C+GQ L A GK V+ PGW++ L+E+ +   + E      A V  ALP L +G    VA 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VNLKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLD  534
            V+LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F++KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMSKQVARCNGMRMTITGPASPA  617
            W+S+ +A+  +  ++I  P +PA
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

71) Psefu_3770 in NC_015556


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  673 bits (2543),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/626 (61%), Positives = 508/626 (82%), Gaps = 8/626 (1%)

Query  1    MRLFLCEKPSQAKDIASVLGATRRGDGCWLGNGVTVTWCIGHLLETAPPDAYDARYKRWV  60
            MRLFLCEKPSQ+KDI+ +LGAT+RG+GC  G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDDLPIVPQQWKMRVKANTAAQFKAIKRLLGEASELVIATDADREGEMIARELLEHCRYR  120
            +++LPI+PQ+W++ VK++TA+QFK +K LL+ A++LVIATDADREGE+IARE++E C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGASTYNLYQSALGRSRADWLIGMNMSRLFTLLGRK  180
            GPI+RLWLSAL+DASIR AL+ L+P+A T ++Y+SAL+RSRADWL+GMN+SRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVPFWAIDVTLDGNGIPFTAVWRAPQDDC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+VP+WAI V+L + G  F+A W  P D C
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DEQGRCLKQEVAQRAAEAMQGAEHAVLEKLKTERMREAPPLLFDLGTLQQVCSKKLGLG  299
             D+ GRCL+Q VAQ++ + +++A  A +  + TER+RE+PPL FDLGTLQ+VCSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQKLYETDKLITYPRSDCGYLPLSQHAEAPAILAALGQADPTLREVLAHTQTQ  359
             QETL+IAQ LYET+K  TYPRSD GYLP S  AE P++L +L ++DP+LR ++++ +  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RRSRAWNDAKVSAHHGIIPTLAAGGLTRLSGRPRAVYELIRARYLAQFLPNHEYDRTQAD  419
            +RSRAWND+KV+AHHGIIPTL ++ L+ +S +  AVY LIR++YLAQFLP+HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGHDLRAVGKQIVEPGWKRALPEALAPSKGREAPAP------QALPALHEGQTCAVR  473
            F C+G++L A GKQ+V PGW++ L+E+ A   + E+ ++       ALP L EG +C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  EVTLKDQFTQPPKPFTEGDLIQAMKNVARLVEDPLLKQKLKDTTGIGTEATRAGIIQGLL  533
            +V LK   T PPKP+T+G+L+++MK VA+LV DP LKQKLKDT GIGTEATRA II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLTKQGKTLAATSAAFGLIDAVPRAIADPGTTAIWEQALDMVQSGEMPLDEFVAKQS  593
             RGYL K+G+++ A+ AAF LIDAVP AIADPGTTA+WEQALDM+++G++ LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMARQIERCRGLQLTISGPPPGGRP  619
            AW+++ I +  +  L+I  P   + P
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACP  625

72) T1E_4226 in NC_018220


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  673 bits (2543),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/665 (57%), Positives = 524/665 (79%), Gaps = 11/665 (1%)

Query  1    MRLFICEKPSQARDIARVLQASHRADGCLKGQNVTITWCVGHLLETAPPETYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A++R++GCL+G  VT+TWC+GHL+E+APPE+Y++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPSQWKLVAKPKVAGQLKVISQLLRTCSEVVIATDADREGEMIAREILERCQYQ  119
            +++LPIIP +W++  KPK A Q+KV+  LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPILRLWLSALDEASIRRALGALRPGEETLPLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GPI RLWLSAL++ASIR ALG LRP+ ETL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  SGFDGLLPVGRVQTPTLRLVVERDRAIASFVPLPFWTVDVHLEQDGIRFQARWQAPTAVS  239
            +G+DG+L+VGRVQTPTL+LVV+RDR IA FV++P+W++ V L  +G  F A+W +P A +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DAVGRCIDETaaqqaqrrfiqaGTAEIDNAEVEHVREGPPLPFDLGTLQEICSAKLGLGA  299
            D  GRC+ +  AQQ+ +++  AG+A++ + E E+VREGPPLPFDLGTLQE+CS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QETLATAQALYETHKATTYPRTDCGYLPESMLDEVPRVLHA-LAAAPSLGAVLKEVDPSR  358
            QETL  AQALYETHKATTYPR+D GYLPESM+ EVP VL++ L + PSL +++ ++D S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  359  RSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRARYLAQFMPEHEYLKTQALL  418
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQF+P+HE+ +T A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  419  HSQADQLVARGKQILVRGWKAVINEADGNEPAEQAQR---------LPTLRESATVALID  469
               +++L A GKQ+++ GW+ V+ E+++++   +++          LP L E+ +  + D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  470  ATLNAQRTQPPKAYTEGTLVKAMKTIANQVADPRLKQKLKDSCGLGTEATRAAIIQGLID  529
              L+A +T PPK+YT+G LVK+MK +A+ V+DPRLKQKLKD+ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  530  HGYLTKKKRSLaasaaaHTLIEAVPPEVADPVMTALWEQALDRIESGQLSVDTFLAKQAE  589
            +GYL KK R++ AS AA TLI+AVP+ +ADP  TA+WEQALD IE+GQL++D F++KQA 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  590  WLTRLVRSNATLTLRPPPSKGPFCPVCRSTMRQRKGRTGSFWSCIRYPECKGTKPVAKAK  649
            W+++L+   ++ +L    ++GP CP C +  RQR G++G+FWSC RYP+CKGT PV  + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  650  RAKNA  654
              + A
Sbjct  661  SKRGA  665

73) Pput_2923 in NC_009512


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  673 bits (2543),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/665 (57%), Positives = 524/665 (79%), Gaps = 11/665 (1%)

Query  1    MRLFICEKPSQARDIARVLQASHRADGCLKGQNVTITWCVGHLLETAPPETYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A++R++GCL+G  VT+TWC+GHL+E+APPE+Y++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPSQWKLVAKPKVAGQLKVISQLLRTCSEVVIATDADREGEMIAREILERCQYQ  119
            +++LPIIP +W++  KPK A Q+KV+  LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPILRLWLSALDEASIRRALGALRPGEETLPLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GPI RLWLSAL++ASIR ALG LRP+ ETL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  SGFDGLLPVGRVQTPTLRLVVERDRAIASFVPLPFWTVDVHLEQDGIRFQARWQAPTAVS  239
            +G+DG+L+VGRVQTPTL+LVV+RDR IA FV++P+W++ V L  +G  F A+W +P A +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DAVGRCIDETaaqqaqrrfiqaGTAEIDNAEVEHVREGPPLPFDLGTLQEICSAKLGLGA  299
            D  GRC+ +  AQQ+ +++  AG+A++ + E E+VREGPPLPFDLGTLQE+CS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QETLATAQALYETHKATTYPRTDCGYLPESMLDEVPRVLHA-LAAAPSLGAVLKEVDPSR  358
            QETL  AQALYETHKATTYPR+D GYLPESM+ EVP VL++ L + PSL +++ ++D S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  359  RSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRARYLAQFMPEHEYLKTQALL  418
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQF+P+HE+ +T A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  419  HSQADQLVARGKQILVRGWKAVINEADGNEPAEQAQR---------LPTLRESATVALID  469
               +++L A GKQ+++ GW+ V+ E+++++   +++          LP L E+ +  + D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  470  ATLNAQRTQPPKAYTEGTLVKAMKTIANQVADPRLKQKLKDSCGLGTEATRAAIIQGLID  529
              L+A +T PPK+YT+G LVK+MK +A+ V+DPRLKQKLKD+ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  530  HGYLTKKKRSLaasaaaHTLIEAVPPEVADPVMTALWEQALDRIESGQLSVDTFLAKQAE  589
            +GYL KK R++ AS AA TLI+AVP+ +ADP  TA+WEQALD IE+GQL++D F++KQA 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  590  WLTRLVRSNATLTLRPPPSKGPFCPVCRSTMRQRKGRTGSFWSCIRYPECKGTKPVAKAK  649
            W+++L+   ++ +L    ++GP CP C +  RQR G++G+FWSC RYP+CKGT PV  + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  650  RAKNA  654
              + A
Sbjct  661  SKRGA  665

74) A458_15255 in NC_018028


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  672 bits (2542),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/623 (62%), Positives = 517/623 (83%), Gaps = 5/623 (0%)

Query  1    MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWV  60
            M+L+LCEKPSQ++DI+++LGA +RG+GCL+G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPERWKMLVKPKTASQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P++W++ VKPKTA+QFK VK LL+  ++LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL+DASIR AL+ L+P+AET+++YH+AL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAIDVQLLADGTAFTAQWQAPDDHC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA F++VP+WAI V L+A+G++F+AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLDqaraqqaadamrnaasarLVKLKTERQREAAPLPFDLGTLQEVCSKKLGLGA  300
            DD GRCL Q+ AQQ+ + +R A+SA++V + TER RE++PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPLSQHGEARAIVAALTQADPTLAALQPHLDLSR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  +E  +++ +L ++DP+L ++  +LD S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTAAARGLERLSGRPRAVYELIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV+AHHGIIPT  +  L  +S +  AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKRIVEPGWKRAMPEALAPTRGSREAPA--PQSLPALQ---QGQDYAVGE  475
             C+GQ L A GK++V PGW++ ++E+ A   ++    A  +Q LPAL    +G    V++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  VNLKDQQTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLD  535
            V+LK  +T PPKP+T+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVRQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSA  595
            RGYLV++G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G++ L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WMSKLVERCAGLRMTISGPPVAA  618
            W+S+L+ + ++  ++I  P  +A
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

75) PputW619_3295 in NC_010501


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  672 bits (2540),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 374/665 (57%), Positives = 523/665 (79%), Gaps = 10/665 (1%)

Query  1    MRLFICEKPSQARDIARVLQASRRGDGCLTGQNLTVTWCVGHLLETAPPETYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A++RG+GCL G  +TVTWC+GHL+E+APPE+Y++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPSRWQLVAKPKVAGQLKVISQLLRTCSEVVIATDADREGEMIAREILERCQYQ  119
            +++LPIIP +W++  KPK A Q+KV+  LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPILRLWLSALDETSIRRALSALRPGEQTLPLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GPI RLWLSAL+++SIR AL+ LRP+ +TL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  AGFDGLLPVGRVQTPTLRLVVERDRAIASFVPLPFWTVDAHLEQDGIRFHARWQAPNAVS  239
            AG+DG+L+VGRVQTPTL+LVV+RDR IA FV++P+W++   L  +G  F A+W +P+A +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DAVGRCIDEtaaqqalrrltqaGSAQIDSVEVERVREGPPLPFDLGTLQEICSAKLGLGA  299
            D  GRC+ +  AQQ+++++  AGSA++ SVE ERVREGPPLPFDLGTLQE+CS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QETLATAQALYETHKVTTYPRSDCGYLPESMLDEVPRVLHALAAAAPSLGEILKEVDPSR  359
            QETL  AQALYETHK TTYPRSD GYLPESM+ EVP VL++L  + PSL  I+ ++D S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  360  RSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRARYLAQFMPEHEYLKTQAQL  419
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQF+P+HE+ +T A++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  420  HSQADHLVARGKQILARGWKAVINEADGNEPAEQAQR---------LPTLRESATVALID  470
               +++L A GKQ++  GW+ V+ E+++++   +++          LP L E+ +  + D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  471  ATLNAQRTQPPKAYTEGTLVRAMKTIANQVADSRLKQKLKDSCGLGTEATRAAIIQGLID  530
              L+A +T PPK+YT+G LV++MK +A+ V+D+RLKQKLKD+ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  531  HGYLTKKKRSLaasaaaHTLIEAVPPEVADPVMTALWEQALDRIESGQLSVETFLAKQTE  590
            +GYL KK R++ AS AA TLI+AVP+ +ADP  TA+WEQALD IE+GQL+++ F++KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  591  WLTRLVRSNATLTLRPPPSKGPFCPVCRSAMRQRKGRTGSFWSCIRYPECKGTKPVAKTK  650
            W+++L+   ++ +L    ++GP CP C ++ RQR G++G+FWSC RYP+CKGT PV    
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  651  RAKNT  655
              + +
Sbjct  661  SKRGA  665

76) Psest_1383 in NC_019936


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  669 bits (2529),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/623 (61%), Positives = 512/623 (83%), Gaps = 5/623 (0%)

Query  1    MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWV  60
            M+L+LCEKPSQ++DI+++LGA +RG+GCL+G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPERWKMLVKPKTASQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P++W++ VKPKTA+QFK VK LL+  ++LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL+DASIR AL+ L+P+AET+++YH+AL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAIDVQLLADGTAFTAQWQAPDDYC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA F++VP+WAI V L+A+G++F+AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLDqaraqqaaeamrnaacarLLKLKTERQREAAPLPFDLGTLQEVCSKKLGLGA  300
            DD GRCL Q+ AQQ+ + +R A+ A+++ + TER RE++PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPLSQHGEARAIVAALAQSDPTLAALEPHLDLSR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  +E  +++ +L ++DP+L ++  +LD S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVGAHHGIIPTAAVRGLERLSGRPRAVYELIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV AHHGIIPT     L  +S +  AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKRIVEPGWKRAMPEALAPARGNREAPAPQ-----SLPTLQQGQDYAVGE  475
             C+GQ L A GK++V PGW++ ++E+ A   +     A +     +LP L +G    V++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  INLKDQQTHPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLD  535
            ++LK  +T PPKP+T+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLLRQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSA  595
            RGYL+++G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G++ L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WMSKLVERCAGLRMTISGPPVAA  618
            W+S+L+ + ++  ++I  P  +A
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

77) topB_1 in NC_017911


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  666 bits (2516),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/623 (61%), Positives = 507/623 (82%), Gaps = 6/623 (0%)

Query  1    MRLYLCEKPSQAKDIAAVLGASRRGDGCWLGNGVTVTWCIGHLLETAPPDAYDAKYKRWV  60
            MRL+LCEKPSQ+KDI+ +LGA++RG+GC  G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPEKWKMLVKPKTASQYKAVKRLLGEAQELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P+ W++ VKPKTA+Q+K VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+AET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVDLRHEHMTFTAQWRAPDDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+V+YWAI V L     TF+AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQDRCLNPQlardaadamlnaatarlVKLRTERMREVAPLPFDLGTLQEICSKKLGLGA  300
            DD +RCL   +A+++ + +  A++A++V + TER+RE +PLPFDLGTLQE+CSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQSLYETHKAITYPRSDCGYLPLSQHSEAPKILAALGRADTAVNELMSHIDPRR  360
            QETL+IAQ+LYETHKA TYPRSD GYLP S  +E P +L +L ++D ++  +M+++D  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVSAHHGIIPTGAGKEVSQLTGKHRAVYTLIRARYLAQFLPNHEYDRTQADL  420
            RSRAWND+KV+AHHGIIPT     +S ++ K+ AVY LIR++YLAQFLP+HE+DRT A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGHALRAVGKVIIEPGWKRALPEALAPAKGREAPAP------QALPTLVQGHDYAVAK  474
             C+G+ L A GK ++ PGW++ L+E+ A   + E+ ++       ALP L +G    VA 
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  475  VNLKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLD  534
            V+LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  535  RGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFIAKQAA  594
            RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ FI+KQAA
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  595  WMSKQVARCNGMRMTITGPASPA  617
            W+S+ +A+  +  ++I  P +PA
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

78) L483_22110 in NC_021491


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  662 bits (2503),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 372/663 (57%), Positives = 516/663 (78%), Gaps = 10/663 (1%)

Query  1    MRLFICEKPSQARDIARVLQASWRGDGYLQGQNVTVTWCIGHLLETAPPESYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A+ RG+G L+G  VTVTWCIGHL+E+APPE+Y++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPDHWQLVVKPKVASQLKVIDQLLQRCAEVVIATDADREGEMIAREILERCQYQ  119
            +++LPIIP+HW++ VKPK A+Q+KV+  LL + +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPVLRLWLSALDEASIRRALAALRPGEQTLPLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GP+ RLWLSAL++ASIR AL+ LRP+ +TL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  AGFDGVLPVGRVQTPTLRLVVERDRAIASFVPHPFWNVDAQLVADGVSFKASWQPPASVC  239
            AG+DGVL+VGRVQTPTL+LVV+RDR IA FV+ P+W +   L A+G +F A W PP +  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DDEGRCLDEaaarqaalrlsqHGTARIGTIEVEHVREGPPLPFDLGTLQEVCSAKLGLGA  299
            DD GRCL ++ A+Q+  ++   G+A++ ++E E+VREGPPLPFDLGTLQEVCS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QETLGIAQALYETHKATTYPRTDCGYLPESMLDEVPRILHALVAPSPALGQVIKALDPCR  359
            QETL IAQALYETHKATTYPR+D GYLPESM+ EVP +L++L+   P+L  ++  LD  +
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  360  RSRAWNSSKITAHHGIIPTAIKLDLTQLSEREQAVYALIRARYLAQFLPEHEYLKTQVLL  419
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQFLP+HE+ +T   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  420  HSQADQLLARGKQILVRGWKAVINETHGNEPGEQTQR---------LPTLRESVSVALTD  470
               +++L A GKQ+++ GW+ V+ E ++++ + + +          LP L E+++  ++D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  471  AAAIIQRTHPPKAYTEGTLVKAMKTIANQVADLRLKQTLRESCGLGTEATRAAIIQGLID  530
                  +T PPK+YT+G LVK+MK +A+ V+D RLKQ L+++ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  531  HGYLTKKKRSLaasaaaHTLIEAVPAEVADPVLTALWEQALGRIESGQLSVETFLAKQSQ  590
            +GYL KK R++ AS AA TLI+AVPA +ADP  TA+WEQAL+ IE+GQL+++ F++KQ+ 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  591  WLTRLVRSNASLTLQPPPSKGPLCPVCCSGMRQRKGRTGSFWSCIRYPDCKGTKPVTKAK  650
            W+++L+   +S +L    ++GP CP C +  RQR G++G+FWSC RYPDCKGT PV  + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  651  RPK  653
              +
Sbjct  661  SKR  663

79) Psyr_2244 in NC_007005


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  661 bits (2498),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/624 (62%), Positives = 510/624 (82%), Gaps = 8/624 (1%)

Query  1    MRLFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWV  60
            MRLFLCEKPSQ+KDI+  LGAT+RG+GC  G+  TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEDLPIVPEKWKMLVKPRTASQFKAVKRLLGEATELVIATDADREGEMIARELIEHCRYR  120
            +E+LPI+P+ W++ VKP+TA+QFK VK LL+ AT+LVIATDADREGE+IARE++E C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+A+T+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+ PYWAI V L+ +  +F AQW  P+DAC
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DDQDRCLNqalaqqaaqamraaasaRLVKLRTERIREAAPLPFDLGTLQEICSKKLGLG  299
             DD +RCL Q++AQQ+ Q +RAA+SA++V + TER+RE++PLPFDLGTLQE+CSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAALCKADPALANLSPHLDPQ  359
             QETL+IAQ+LYETHK  TYPRSD GYLP+S  +E + ++ +L K+DP+L ++  +LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RRSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIRARYLAQFLPNHEYDRTQAD  419
            +RSRAWND+KVTAHHGIIPT     +  +S K  AVY LIR++YLAQFLP+HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREapapqplpa------lFQGCECAVA  473
            F C+G+ L A GKQ+V PGW++ ++E+ A   + E+ ++           L++G  C VA
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  EVILKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLL  533
            +V LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLTKQGKSLCAAPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQA  593
             RGYL K+G+++ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F++KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMSKQVSRCVGMRMSISGPASPA  617
            AW+S+ +++  +  +SI  P +PA
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPA  623

80) topB in NC_015740


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  661 bits (2497),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/623 (61%), Positives = 514/623 (83%), Gaps = 5/623 (0%)

Query  1    MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWV  60
            M+L+LCEKPSQ++DI+++LGA +RG+GCL+G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPERWKMLVKPKTASQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P++W++ VKPKTA+QFK VK LL+  ++LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL+DASIR AL+ L+P+AET+++YH+AL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYRGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAIDVQLLADGAAFTAQWQAPDDLC  240
            +GY GVL+VGRVQTPTL+LVVDRDR IA F++VP+WAI V L+A+G++F+AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLDqaraqqaadamrnaasarLLKLKTERQREAAPLPFDLGTLQEVCSKKLGLGA  300
            DD GRCL Q+ AQQ+ + +R A+SA+++ + TER RE++PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPLSQHGEARAIVAALTQADPTLAALQPHLDLSR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  +E  +++ +L ++DP+L ++  +LD S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVGAHHGIIPTaaarglerlagrpraVYELIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV AHHGIIPT  +  L  ++ +  AVY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKRVVEPGWKRAMPEALAPARGNREEHA--PQSLPALQ---QGGDYAVGE  475
             C+GQ L A GK+VV PGW++ ++E+ A   +   + A  +Q LPAL    +G    V++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  ITLKDQQTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLD  535
            + LK  +T PPKP+T+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVRQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSA  595
            RGYLV++G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G++ L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WMSKLVERCAGLRMTISGPPVAA  618
            W+S+L+ + ++  ++I  P  +A
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

81) PPS_2364 in NC_015733


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  660 bits (2494),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/653 (59%), Positives = 511/653 (79%), Gaps = 9/653 (1%)

Query  1    MRLYICEKPSQARDIARVLQAHRRGDGYLQGIGVTVTWCVGHLLETAPPETYSDQFKRWS  60
            MRL++CEKPSQ++DI+R+L A +RG+G L+G GVTVTWC+GHL+E+APPE+Y +Q+KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEHLPIIPQHWQLVVKPKVAAQLKAISRLLQACAEVVIATDADREGEMIAREILERCQYQ  120
            +E+LPIIPQHW++ VKPK A+Q+K +  LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPILRLWLSALDDASIRRALTALRPGEQTLPLYHCALARSRADWLVGINLSRLFTLLGRR  180
            GPI RLWLSAL+DASIR AL  LRP+ +TL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  AGFDGTLPVGRVQTPTLRLVVERDRAIASFVARPFWTVDVVLHADGAEFEARWQPPAAHC  240
            AG+DG L+VGRVQTPTL+LVV+RDR IA FV+ P+W++ V L A+G+ F A+W PP A  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDAGHCVDQaaaeqvarrlaaarSVQVERVDVERVTEGPPLPFDLGTLQEVCSAKLGLGA  300
            DDAG+C+ Q+ A+Q  +++ AA S +V  V+ ERV EGPPLPFDLGTLQEVCS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLSVAQALYETHKATTYPRSDCGYLPESMLDEVPRVlkalaaadpalaQRFKEFDPTR  360
            QETL +AQALYETHKATTYPRSD GYLPESM+ EVP VL +L  +DP+L     ++D ++
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNSSKVTAHHGIIPTPVVIPLDQLSERERAVYTLIRARYLAQFLPHHEYLKTQVQL  420
            RSRAWN +KVTAHHGIIPT     L  +SE+E AVY LIR++YLAQFLPHHE+ +T  ++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  RSQADQVLARGKQIQVRGWKAVIDETDASEPTEQTQR---------LPTLQDGASVAAHD  471
               ++++ A GKQ+ + GW+ V+ E +A +   + +          LP L +G +    D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  472  ATINTQRTQPPKPYTEGTLVKAMKTIANQVADMRLKQTLKDSIGIGTEATRAAIIQGLID  531
              +++ +T PPKPYT+G LVK+MK +A+ V+D RLKQ LKD++GIGTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  532  HGYLTKKKRSLaasaaaHTLIEAVPREVADPVMTALWEQALARIETGQLSVEAFLAKQSA  591
            +GYL KK R++ AS AA TLI+AVP  +ADP  TA+WEQAL  IE+GQL+++ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  592  WLTQVVRSQASLNLQLPRSKGPACPVCRSPMRQRKGRTGNFWSCVRYPDCKGT  644
            W++Q++   +S +L +  ++GPACP C +P RQR G++G FWSC RYPDCKGT
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGT  653

82) L483_11955 in NC_021491


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  660 bits (2496),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 374/665 (57%), Positives = 523/665 (79%), Gaps = 10/665 (1%)

Query  1    MRLFICEKPSQARDIARVLQASRRADGYLKGPNLIVTWCVGHLLETAPPEAYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A++R++G L+G+ + VTWC+GHL+E+APPEAY++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPSRWQLVAKPKVASQLKVINQLLRTCSEVVIATDADREGEMIAREILERCQYQ  119
            +++LPIIP +W++  KPK A+Q+KV++ LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPILRLWLSALDEASIRRALGALRPGEQTLPLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GPI RLWLSAL++ASIR ALG LRP+ +TL++YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  AGFDGLLPVGRVQTPTLRLVVERDRAIASFVPQPFWTLDAHLEQDGIRFHARWQPTAAAS  239
            AG+DG+L+VGRVQTPTL+LVV+RDR IA FV+ P+W++   L  +G  F A+W P  A +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DAVGRCIDEtaaqqalrrltqaGSAQIYSFEVERVREGPPLPFDLGMLQEICSAKLGLGA  299
            D  GRC+ +  AQQ+++++  AGSA++ S E ERVREGPPLPFDLG LQE+CS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QEALATAQALYENHKATTYPRTDCGYLPESMLDEAPRVLHalaaaaPSLGGILKEVDPSR  359
            QE+L  AQALYE HKATTYPR+D GYLPESM+ E P VL++L  + PSL +I+ ++D S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  360  RSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRARYLAQFMPEHEYLKTQALL  419
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQF+P+HE+ +T A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  420  QSQADQLIARGKQILVRGWKAVVNEADGNEPAEQAQR---------LPTLRESATVALID  470
               +++L A GKQ+++ GW+ V+ E+++++   +++          LP L E+ +  + D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  471  ATLNAQSTQPPKAYTEGTLVKAMKTIANLVADPRLKQKLKDSCGLGTEATRAAIIQGLID  530
              L+A  T PPK+YT+G LVK+MK +A+LV+DPRLKQKLKD+ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  531  HGYLIKKKRSLaasaaaHTLIEAVPPEVADPVMTALWEQALDRIESGQLSVETFLAKQAE  590
            +GYL+KK R++ AS AA TLI+AVP+ +ADP  TA+WEQALD IE+GQL+++ F++KQA 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  591  WLTRLVRSNATLTLRPPPSKGPFCPVCCSSMRQRKGRTGSFWSCTRYPECKGTKPVAKAK  650
            W+++L+   ++ +L    ++GP CP C ++ RQR G++G+FWSC+RYP+CKGT PV  + 
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESGS  660

Query  651  RAKNA  655
              + A
Sbjct  661  SKRGA  665

83) topB in NC_004578


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  659 bits (2493),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 383/617 (63%), Positives = 504/617 (82%), Gaps = 8/617 (1%)

Query  1    MRLFLCEKPSQAKDIAAALGATRRGDGCWVGASATVTWCIGHLLETAPPDAYDARYKRWV  60
            MRLFLCEKPSQ+KDI+  LGAT+RG+GC  G++ TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEDLPIVPEKWKMLVKPRTASQFKAVKRLLGEANELVIATDADREGEMIARELVEHCRYR  120
            +E+LPI+P+ W++ VKP+TA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+A+T+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPAPFWAIDVKLLHENQAFIAQWRAPSDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+ P+WAI V L+    +F AQW  P+DAC
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DDQDRCLNQPLaqqaadamrhaasarLVKLRTERMREAAPLPFDLGTLQEICSKKLGLG  299
             DD +RCL QP+AQQ+ + +R A+SA++V + TER+RE++PLPFDLGTLQE+CSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIITALGKTDPALAGLLPHLDPQ  359
             QETL+IAQ+LYETHK  TYPRSD GYLP+S  +E + ++ +L KTDP+L +++ +LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RRSRAWNDAKVTAHHGIIPTAAVRGVERLIGKPRAVYTLIRARYLAQFLPNHEYDRTQAD  419
            +RSRAWND+KVTAHHGIIPT     +  +  K  AVY LIR++YLAQFLP+HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGQALRAVGKQIVEPGWKRAMPEALAPAKGREapapqplpa------lFQGCECAVA  473
            F C+GQ L A GKQ+V PGW++ ++E+ A   + E+ ++           L++G  C VA
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  DVILKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLL  533
            DV LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLTKQGKALCATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQA  593
             RGYL K+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F++KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMSKQVSRCVGMRMTI  610
            AW+S+ +++  +  ++I
Sbjct  600  AWISQLIAQYGSASLSI  616

84) topB1 in NC_005773


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  658 bits (2487),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/617 (63%), Positives = 501/617 (82%), Gaps = 8/617 (1%)

Query  1    MRLFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWV  60
            MRLFLCEKPSQ+KDI+  LGAT+RG+GC  G+  TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LEDLPIIPEKWKMLVKPRTASQFKAVKRLLGEAQELVIATDADREGEMIARELVEHCRYR  120
            +E+LPIIP+ W++ VKP+TA+QFK VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI+RLWLSAL+DASIR AL+ L+P+A+T+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+ PYWAI V L+ +  +F AQW  P+DAC
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DDQDRCLNQPLaqqaaeamrsaasarLVKLRTERIREVAPLPFDLGTLQEICSKKLGLG  299
             DD +RCL QP+AQQ+ + +R+A+SA++V + TER+RE +PLPFDLGTLQE+CSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAVLCKADPTLASLSPHLDPQ  359
             QETL+IAQ+LYETHK  TYPRSD GYLP+S  +E + ++  L K+DP+L S+  +LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RRSRAWNDGKVTAHHGIIPTAAVRGVERLTGKPRAVYTLIRARYLAQFLPSHEYDRTQAD  419
            +RSRAWNDGKVTAHHGIIPT     +  ++ K  AVY LIR++YLAQFLP HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREapapqplpa------lFQGCECTVA  473
            F C+G+ L A GKQ+V PGW++ ++E+ A   + E+ ++           L++G  C VA
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  EVILKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLL  533
            +V LK L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLTKQGKALCAAPAAFSLIDAVPRAIADPGTTAIWEQALDMVQNGEMSLEEFVAKQA  593
             RGYL K+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM++ G+++L+ F++KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMSKQVSRCVGMRMSI  610
            AW+S+ +++  +  +SI
Sbjct  600  AWISQLIAQYGSASLSI  616

85) PSF113_3218 in NC_016830


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 386/624 (62%), Positives = 511/624 (82%), Gaps = 8/624 (1%)

Query  1    MQLYLCEKPSQAKDIAAVLGATRRGDGCWLGPGITVTWCIGHLLETAPPDAYDARYKRWV  60
            M+L+LCEKPSQ+KDI+ +LGAT+RG+GC  G+G+TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPAQWKMTVKPKTASQYKAVKRLLGEAKELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P +W++ VKPKTA+Q+K VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDEASIRKALAALKPGAETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL++ASIR AL+ L+P+AET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVQLSHEGTAFTAQWRADPDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+V+YWAI V L   G++F+AQW   PDAC
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DDQERClnqalardaaqamanattarTLKVRTERLREAAPLPFDLGTLQEVCSKKLGLG  299
             DD  RCL Q++A+++ Q +  A +A+ + V TER+RE++PLPFDLGTLQEVCSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQSLYETYKLITYPRSDCGFLPLSQHSEapailaalaqaDPSLAPLREHLQPQ  359
             QETL+IAQ+LYET K  TYPRSD G+LP S  +E P++L +L ++DPSL ++  +L+  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKSRAWNDAKVSAHHGIIPTAAARNLDKLAGKQRAVYTLIRARYLAQFLPNHEYDRTQAD  419
            ++SRAWND+KV+AHHGIIPT  + +L  ++ K+ AVY LIR++YLAQFLP+HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGQALRAVGKQIVEPGWKRALPEALAP---ARGREAPTPQTLPALS---EGRDCAVD  473
            F C+GQ L A GKQ+V PGW++ L+E+ A    + G  A  +Q LPAL+   EG  C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  EVKPKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLL  533
            +V  K L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA+II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVTRQA  593
             RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+ +QA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMSKHVARCQGMSLTISGPASPA  617
            AW+S+ +A+  + SL+I  P +PA
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPA  623

86) PSEBR_a1917 in NC_015379


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  654 bits (2472),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/624 (62%), Positives = 511/624 (82%), Gaps = 8/624 (1%)

Query  1    MQLYLCEKPSQAKDIAAVLGATRRGDGCWLGPGITVTWCIGHLLETAPPDAYDARYKRWV  60
            M+L+LCEKPSQ+KDI+ +LGAT+RG+GC  G+G+TVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPAQWKMTVKPKTASQYKAVKRLLGEAKELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P +W++ VKPKTA+Q+K VK LL+ A +LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDEASIRKALAALKPGAETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL++ASIR AL+ L+P+AET+++YHSAL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPIAYWAIDVQLSHEGTAFTAQWRADPDAC  240
            +GY+GVL+VGRVQTPTL+LVVDRDR IA FV+++YWAI V L   G++F+AQW   PDAC
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQW-VPPDAC  239

Query  241  -DDQERClnqalardaamamsnaasarTLKVRTERLREAAPLPFDLGTLQEVCSKKLGLG  299
             DD  RCL Q++A+++   +  A+SA+ + V TER+RE++PLPFDLGTLQEVCSK+LGL+
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQETLDIAQSLYETYKLITYPRSDCGFLPLSQHSEapailaalaqaDPSLAPLREHLQPQ  359
             QETL+IAQ+LYET K  TYPRSD G+LP S  +E P++L +L ++DPSL ++  +L+  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKSRAWNDAKVSAHHGIIPTAAARNLDKLAGKQRAVYTLIRARYLAQFLPNHEYDRTQAD  419
            ++SRAWND+KV+AHHGIIPT  + +L  ++ K+ AVY LIR++YLAQFLP+HE+DRT A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  FDCAGQALRAVGKQIVEPGWKRALPEALAP---ARGREAPAPQTLPALA---EGRDCAVD  473
            F C+GQ L A GKQ+V PGW++ L+E+ A    + G  A  +Q LPAL+   EG  C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  EVKPKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLL  533
            +V  K L T PPKP+T+G+L+K+MK VAKLV DP LKQKLKDT GIGTEATRA+II GL+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  DRGYLVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVTRQA  593
             RGYLVK+G+A+ A+ AAF+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F+ +QA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWMSKHVARCQGMSLTISGPASPA  617
            AW+S+ +A+  + SL+I  P +PA
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPA  623

87) topB in NC_017532


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  652 bits (2466),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 373/623 (60%), Positives = 509/623 (82%), Gaps = 5/623 (0%)

Query  1    MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWV  60
            M+L+LCEKPSQ++DI+++LGA +RG+GCL+G+GVTVTWCIGHL+E+APP+AYD + KRW 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LADLPIVPERWKMLVKPKTASQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYR  120
            + +LPI+P++W++ VKPKTA+QFK VK LL+  ++LVIATDADREGE+IARE+VE C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRSRADWLIGMNMSRLFTLLGRQ  180
            GPI RLWLSAL+DASIR AL+ L+P+AET+++YH+AL+RSRADWL+GMN+SRLFT+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  SGYRGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAVDVQLLADGAAFIAQWQAPDDHC  240
            +GY GVL+VGRVQTPTL+LVVDRDR IA F++VP+WA+ V L+A+G++F AQW +PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DDQGRCLDqaraqqaadamrnaasarLLKLKTERQREAAPLPFDLGTLQEVCSKKLGLGA  300
            DD GRCL Q+ AQQ+ + +R A+SA+++ + TER RE++PLPFDLGTLQEVCSK+LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  301  QETLDIAQALYETHKLITYPRSDCGYLPLSQHGEARAIVAALTQADPTLAALQPHLDLSR  360
            QETL+IAQALYETHK  TYPRSD GYLP S  +E  +++ +L ++DP+L ++  +LD S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  361  RSRAWNDAKVGAHHGIIPTaaarglerlagrprTVYELIRARYLAQFLPNHEYDRTQADF  420
            RSRAWND+KV AHHGIIPT  +  L  ++ +  +VY LIR++YLAQFLP+HE+DRT A F
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  421  DCAGQALRAVGKRVVEPGWKRAMPEALAPARGNREaaapqslpalqqgqDYA-----VGE  475
             C+GQ L A GK+VV PGW++ ++E+ A   +    +A ++       + Y      V++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  476  IKLKDQQTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLD  535
            + LK  +T PPKP+T+G+L+K+MK VAKLV DPRLKQKLKDT GIGTEATRA II GL+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  536  RGYLVRQGKALAATPAAFSLIDAVPRPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSA  595
            RGYLV++G+A+ A+ AAF+LIDAVP +IADPGTTA+WEQALDM+++G++ L+ F++KQ+A
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  596  WMSKLVERCAGLRMTISGPPVAA  618
            W+S+L+ + ++  ++I  P  +A
Sbjct  601  WISQLIAQYGSASLSIKVPQGPA  623

88) YSA_00753 in NC_017986


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  640 bits (2420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 371/655 (57%), Positives = 514/655 (79%), Gaps = 10/655 (1%)

Query  1    MRLFICEKPSQARDIARVLQASRRGDGYLEGQNLTVTWCVGHLLETAPPETYGD-YKRWS  59
            MRLF+CEKPSQ++DI+R+L A++RG+G L+G  +TVTWC+GHL+E+APPE+Y++  KRWS
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   LDDLPIIPSQWKLVSKPKVAGQLNAISQLLRTCSEVVIATDADREGEMIAREILERCQYH  119
            +++LPIIP +W++  KPK A Q++ +  LL   +++VIATDADREGE+IAREI+E C Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPILRLWLSALDEASIRRALSALRPGEQTLSLYHCALARSRADWLVGINLSRLFTLLGRR  179
            GPI RLWLSAL++ASIR AL+ LRP+ +TLS+YH ALARSRADWLVG+NLSRLFT+LGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  AGFDGLLPVGRVQTPTLRLVVERDRAIASFVPQPFWTVDAHLEQDGIRFHARWQAPTAVS  239
            AG+DG+L+VGRVQTPTL+LVV+RDR IA FV+ P+W++   L  +G  F A+W +P A +
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DAVGRCIDEtaaqqalrrltqaGTAQIDSVEVERGREGPPLPFDLGTLQEICSAKLGLGA  299
            D  GRC+ +  AQQ+++++  AG+A++ SVE ER REGPPLPFDLGTLQE+CS +LGL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  QETLATAQALYETHKATTYPRTDCGYLPESMLDEVPRVlhalaaaapslgavlKEIDPSR  359
            QETL  AQALYETHKATTYPR+D GYLPESM+ EVP VL++L  + PSL +++ ++D S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  360  RSRAWNSSKITAHHGIIPTAVTLDLAQLSERERAVYTLIRARYLAQLMPEHEYLKTQALL  419
            RSRAWN +K+TAHHGIIPT     L+ +SE+E AVY LIR++YLAQ++P+HE+ +T A +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  420  HSQADQLVARGKQVLVRGWKAVINEADGAEPAEQAQR---------LPTLRESATVLLID  470
               +++L A GKQV++ GW+ V+ E+++ +   +++          LP L E+ +  + D
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  471  ATLNAQQTQPPKAYTEGTLVKAMKTIASQVAEPRLKQKLKDSCGLGTEATRAAIIQGLID  530
              L+A +T PPK+YT+G LVK+MK +A  V++PRLKQKLKD+ G+GTEATRA II GLI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  531  HGYLTKKKRSLaasaaaHTLIEAVPPEVADPVMTALWEQALDRIESGQLSVETFLAKQAE  590
            +GYL KK R++ AS AA TLI+AVP+ +ADP  TA+WEQALD IE+GQL+++ F++KQA 
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  591  WLTRLVRSNATLTLRPPPSKGPFCPVCRSTMRQRKGRTGNFWSCIRYPECKGTKP  645
            W+++L+   ++ +L    ++GP CP C +  RQR G++G FWSC RYP+CKGT P
Sbjct  601  WISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLP  655

89) H045_06300 in NC_020209


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  630 bits (2381),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 363/599 (61%), Positives = 485/599 (81%), Gaps = 6/599 (1%)

Query  1    MLGASRRGDGCWLGNGVTVTWCIGHLLETAPPDTYDAKYKRWVLADLPIVPQKWKMLVKP  60
            +LGA++RG+GC  G+GVTVTWCIGHL+E+APP++YD + KRW + +LPI+PQ W++ VKP
Sbjct  18   ILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWSVEQLPIIPQHWRVEVKP  77

Query  61   KTASQFKAVKRLLGEAQELIIATDADREGEMIARELVEHCRYRGPIQRLWLSALDDASIR  120
            KTA+QFK VK LL+ A +L+IATDADREGE+IARE+VE C YRGPI+RLWLSAL+DASIR
Sbjct  78   KTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYRGPIERLWLSALNDASIR  137

Query  121  KALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTL  180
             AL+ L+P+AET+S+YHSAL+RSRADWL+GMN+SRLFT+LGRQ+GY+GVL+VGRVQTPTL
Sbjct  138  AALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTL  197

Query  181  RLVVDRDRSIADFVPVAYWAIDVDLRHDAITFTAQWRAAEDACDDQGRCLNPQLardaaq  240
            +LVVDRDR IA FV+V+YWAI V L  ++ TF+AQW +++   DD GRCL   +A+++ Q
Sbjct  198  KLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACTDDAGRCLRQPVAQQTMQ  257

Query  241  amtqaasarLVKLRTERMREVAPLPFDLGTLQEVCSKKLGLGAQETLDIAQSLYETHKVI  300
             +  A+SA++V + TER+RE +PLPFDLGTLQEVCSK+LGL+ QETL+IAQ+LYETHK  
Sbjct  258  QIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKAT  317

Query  301  TYPRSDCGYLPLSQHSDAPKILAALGRADAAVNELMPHIDPQRRSRAWNDAKVSAHHGII  360
            TYPRSD GYLP S  ++ P +L +L ++D+++  +M ++D  +RSRAWND+KV+AHHGII
Sbjct  318  TYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQRSRAWNDGKVTAHHGII  377

Query  361  PTGAGKDLGQLAGKQRAVYTLIRARYLAQFLPNHEYDRTQADFDCAGQALRAVGKVVIEP  420
            PT     L+ ++ K+ AVY LIR++YLAQFLP+HE+DRT A F C+GQ L A GK V+ P
Sbjct  378  PTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKFSCGGQNLAATGKQVVIP  437

Query  421  GWKRALPEALAPAKGREapapqalptlaq------GRDYVVARVNLKDLWTQPPKPFTEG  474
            GW++ L+E+ A   + E+ ++     L+       G    VA V+LK L T PPKP+T+G
Sbjct  438  GWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVADVDLKALKTLPPKPYTQG  497

Query  475  DLIKAMKNVAKLVQDPLLKQKLKDTTGIGTEATRAGIIQGLLDRGYLVKNGKALSATPAA  534
            +L+K+MK VAKLV DP LKQKLKDT GIGTEATRA II GL+ RGYLVK+G+A+ A+ AA
Sbjct  498  ELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGYLVKKGRAIRASDAA  557

Query  535  FSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAAWMSKQVARCNGMRMTI  593
            F+LIDAVP AIADPGTTA+WEQALDM+++G+++L+ F++KQAAW+S+ +A+  +  ++I
Sbjct  558  FTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIAQYGSASLSI  616

90) topB in NC_014532


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  617 bits (2331),  Expect = 6e-178, Method: Compositional matrix adjust.
 Identities = 344/659 (53%), Positives = 492/659 (75%), Gaps = 12/659 (1%)

Query  3    RLFLCEKPTQARDIAKVLGASEKGNGCLKGRGITVTWGFGHLLEQANPEAYDPALKRWSM  62
            RLFLCEKP+Q++DI+++LGA+++G+GCL+G G+TVTW +GHL+E A PEAYD  LKRWS+
Sbjct  2    RLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWSV  61

Query  63   ESLPILPTQWKLEVKPSAKKQFTVVKKLLSSASEVVIATDADREGEMIAREILEACQFSG  122
            E LPI+P +W++EVKP +  QF VVK LL+ A+++VIATDADREGE+IAREI+E C + G
Sbjct  62   EQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYRG  121

Query  123  GVSRLWLPALDEASIRKALGDIRPGESTRLLYHAALGRSRADWLVGMNLTRAFTMRAKQL  182
             + RLWL+AL++ASIR ALG +RP+  T  +YH+AL+RSRADWLVGMNL+R FT+ ++Q 
Sbjct  122  PIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQA  181

Query  183  GYDLLLSVGRVQTPVLKLVVDRDREIANFVPKPFWEVVAVFQAEGGTFQAKWQPADDDVL  242
            GYD +LSVGRVQTP LKLVVDRDREIA FV+ P+W +   + A G+TF A+W P+ D   
Sbjct  182  GYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPP-DACT  240

Query  243  DESGRCINQSAAQAVVARCQGL-PGQVTTLETTRKREAPPLAMDLGTLQQTCSKRWGYGA  301
            D++GRC+ Q+ AQ  + + ++  +++V ++ET R RE+PPL+ DLGTLQ+ CSK+ G + 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  302  QQVLDIAQALYETHKATTYPRTDCRYLPLSQLDDAQQVVTALLTSDGELAPVVQSLDLTR  361
            Q+ L+IAQALYETHKATTYPR+D  YLP S + +   V+ +LL +D  L +++  LD ++
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  362  KSRVWNDSKITAHHGIIPTTSPCDTSKMSEAEWNVYDLVRRHYLAQFLPPHEYDHTDVAL  421
            +SR WND+K+TAHHGIIPT  P   S MSE E  VY L+R HYLAQFLP HE+D+T   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  422  EVAGERFATTGRQVQVEGWKVLFRNVQQDDAAGDEATAKTSSQALPPLQ---AHANVPQS  478
              +G+ +A+TG+QV + GW+ ++ + Q +D+ G+  TA   +Q LP+L           +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTA-VRAQVLPALPKLYEGLACQVA  479

Query  479  SLDLVSKTTTPPKPFAEGTLIGAMKNAARFEPNPKLKARLKESAGIGTEATRAGIIETLL  538
             +DL +  T PPKP+++G L+ +MK  A++ ++P+LK +LK++ GIGTEATRA II  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  539  KRKFLTKKGRAIVATATGRQLIDALPEVVTNPGMTALWEQALDSVAAGELSLEDFMAKQQ  598
             R +L KKGRAI A+ ++  LIDA+P  +++PG TA+WEQALD + AG+L+L+ F++KQ 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  599  TLVERLIEQ--AKSATINLPQEPAKSKACPECGAPMKKRKNDYGSFWGCTKYPDCKGMV  655
            + + +LI Q  + S +I++PQ P    ACP+CGAP ++R    G+FW+C++YPDCKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGP----ACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

91) LF82_668 in NC_011993


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  616 bits (2326),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 342/676 (51%), Positives = 505/676 (75%), Gaps = 11/676 (1%)

Query  1    MKLFLCEKPSQGRDIAAVLGATKKMPGHQTGNGVCVTWGFGHLLEQASPDAYGEQFGVPW  60
            M+LFLCEKPSQG+DI+ +LGAT++  G   G+GV VTW +GHL+E A+P+AY+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLK-RW  59

Query  61   RTDVLPVLPTMWQMRVKPDAAAQFSVIQKLLKQADTVVIATDADREGEVIAREILDYCHY  120
              + LP++P  W++ VKP +A+QF V++ LL +A  +VIATDADREGE+IAREI++ C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGKVERLWLSALDEASVRAALATIKPGSTTLPYYLAGLGRARADWQIGMNMTRLYSVKAR  180
            +G +ERLWLSAL++AS+RAAL+ ++P++ TL+ Y ++L+R+RADW +GMN++RL++V +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ENGYGSVLSVGRVQTPTLNLIVVRDRDIVQFVPKPYWNVVAQLAAGGIAFQAQWVPAEAY  240
            + GY++VLSVGRVQTPTL+L+V RDR+I +FV+ PYW +   L AGG +F AQWVP++A 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCINPTAAQQVVQLCQKTGQATVAEVETKRETESAPLAFDLGTLQQACSRRFGYG  300
             D+  RC+    AQQ +Q  + +G A V  VET R  E++PL+FDLGTLQ+ CS+++G +
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQQVLDIAQALYETYKATTYPRTDCGYLPTSMRGEIGQVMSSIQQSDPALSAIISRLDMK  360
             Q+ L+IAQALYET KATTYPR+D GYLP SM +E+  V+ S+ ++DP+L +I+++LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  HVSRIWNDKKITAHHGIIPTKQPCDLAKMSEQERNVYQLIRLHYLAQFLPNHEVDATRVS  420
            + SR WND K+TAHHGIIPT +P  L+ MSE+E  VY+LIR HYLAQFLP+HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LHCGGQLFKTSGKAVVVAGWKSLFgkdade----dagdagdkaRLPAMAK---GSLCQVT  473
            + CGGQ + ++GK VV++GW+ +++    E    +++ A     LPA++K   G  CQV+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  GAEAKPQQTKPPEHYTEGTLIAAMKNAAQFVTDPRLKKILKENAGLGTEATRAGVIETLL  533
            + + K+ +T PP  YT+G L+ +MK  A++V+DPRLK+ LK+  G+GTEATRA +I  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  KRGFVVKKGKHLLATPIAADLMAVLPAQLKDPGMTALWEQSLDDIAEGRMSLDDFMAKQS  593
             RG++VKKG+ + A+  A  L+  +PA + DPG TA+WEQ+LD I  G+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWTMQLVAKGQHQTVKITLPPSPPCPICGGVTRQRTGKSGSFWGCVNYPDCNGIVNV---  650
            AW  QL+A+    ++ I +P +P+CP CG+ TRQR+GKSG+FW+C  YPDC+G + V   
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  651  GAKKPGRRRKSPAKKS  666
            ++K+ + R + +++K+
Sbjct  660  SSKRGASRPRRSGRKG  675

92) NRG857_20800 in NC_017634


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  616 bits (2326),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 342/676 (51%), Positives = 505/676 (75%), Gaps = 11/676 (1%)

Query  1    MKLFLCEKPSQGRDIAAVLGATKKMPGHQTGNGVCVTWGFGHLLEQASPDAYGEQFGVPW  60
            M+LFLCEKPSQG+DI+ +LGAT++  G   G+GV VTW +GHL+E A+P+AY+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLK-RW  59

Query  61   RTDVLPVLPTMWQMRVKPDAAAQFSVIQKLLKQADTVVIATDADREGEVIAREILDYCHY  120
              + LP++P  W++ VKP +A+QF V++ LL +A  +VIATDADREGE+IAREI++ C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGKVERLWLSALDEASVRAALATIKPGSTTLPYYLAGLGRARADWQIGMNMTRLYSVKAR  180
            +G +ERLWLSAL++AS+RAAL+ ++P++ TL+ Y ++L+R+RADW +GMN++RL++V +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ENGYGSVLSVGRVQTPTLNLIVVRDRDIVQFVPKPYWNVVAQLAAGGIAFQAQWVPAEAY  240
            + GY++VLSVGRVQTPTL+L+V RDR+I +FV+ PYW +   L AGG +F AQWVP++A 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCINPTAAQQVVQLCQKTGQATVAEVETKRETESAPLAFDLGTLQQACSRRFGYG  300
             D+  RC+    AQQ +Q  + +G A V  VET R  E++PL+FDLGTLQ+ CS+++G +
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQQVLDIAQALYETYKATTYPRTDCGYLPTSMRGEIGQVMSSIQQSDPALSAIISRLDMK  360
             Q+ L+IAQALYET KATTYPR+D GYLP SM +E+  V+ S+ ++DP+L +I+++LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  HVSRIWNDKKITAHHGIIPTKQPCDLAKMSEQERNVYQLIRLHYLAQFLPNHEVDATRVS  420
            + SR WND K+TAHHGIIPT +P  L+ MSE+E  VY+LIR HYLAQFLP+HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LHCGGQLFKTSGKAVVVAGWKSLFgkdade----dagdagdkaRLPAMAK---GSLCQVT  473
            + CGGQ + ++GK VV++GW+ +++    E    +++ A     LPA++K   G  CQV+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  GAEAKPQQTKPPEHYTEGTLIAAMKNAAQFVTDPRLKKILKENAGLGTEATRAGVIETLL  533
            + + K+ +T PP  YT+G L+ +MK  A++V+DPRLK+ LK+  G+GTEATRA +I  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  KRGFVVKKGKHLLATPIAADLMAVLPAQLKDPGMTALWEQSLDDIAEGRMSLDDFMAKQS  593
             RG++VKKG+ + A+  A  L+  +PA + DPG TA+WEQ+LD I  G+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  AWTMQLVAKGQHQTVKITLPPSPPCPICGGVTRQRTGKSGSFWGCVNYPDCNGIVNV---  650
            AW  QL+A+    ++ I +P +P+CP CG+ TRQR+GKSG+FW+C  YPDC+G + V   
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  651  GAKKPGRRRKSPAKKS  666
            ++K+ + R + +++K+
Sbjct  660  SSKRGASRPRRSGRKG  675

93) topB in NC_009434


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  613 bits (2316),  Expect = 9e-177, Method: Compositional matrix adjust.
 Identities = 355/591 (61%), Positives = 484/591 (82%), Gaps = 7/591 (1%)

Query  1    MTVTWCIGHLLETAPPDAYDPRYKRWVLADLPIVPERWKMLVKPKTASQFKAVKRLLGEC  60
            +TVTWCIGHL+E+APP+AYD + KRW + +LPI+P++W++ VKPKTA+QFK VK LL+  
Sbjct  34   VTVTWCIGHLVEAAPPEAYDEQLKRWSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKA  93

Query  61   RELVIATDADREGEMIARELVEHCRYRGPIRRLWLSALDDASIRKALAALKPGAETFNLY  120
             +LVIATDADREGE+IARE+VE C YRGPI RLWLSAL+DASIR AL+ L+P+AET+++Y
Sbjct  94   THLVIATDADREGELIAREIVELCGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMY  153

Query  121  HAALGRSRADWLIGMNMSRLFTLLGRQSGYRGVLPVGRVQTPTLRLVVDRDRSIADFIPV  180
            H+AL+RSRADWL+GMN+SRLFT+LGRQ+GY GVL+VGRVQTPTL+LVVDRDR IA F++V
Sbjct  154  HSALARSRADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSV  213

Query  181  PFWAIDVQLLADGAAFTAQWQAPDDLCDDQGRCLDqaraqqaadamrnaasarLLKLKTE  240
            P+WAI V L+A+G++F+AQW +PD   DD GRCL Q+ AQQ+ + +R A+SA+++ + TE
Sbjct  214  PYWAIAVSLFAGGSTFAAQWVPPDACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETE  273

Query  241  RQREAAPLPFDLGTLQEVCSKKLGLGAQETLDIAQALYETHKLITYPRSDCGYLPLSQLG  300
            R RE++PLPFDLGTLQEVCSK+LGL+ QETL+IAQALYETHK  TYPRSD GYLP S ++
Sbjct  274  RVREGPPLPFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFA  333

Query  301  EARAIVAALTQADPTLAALQPHLDLSRRSRAWNDAKVGAHHGIVPTaaarglerlagrpr  360
            E  +++ +L ++DP+L ++  +LD S+RSRAWND+KV AHHGI+PT  +  L  ++ +  
Sbjct  334  EVPTVLDSLLKTDPSLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKEL  393

Query  361  aVYELIRARYLAQFLPNHEYDRTQADFDCAGQALRAVGKRVVEPGWKRAMPEALAPARGN  420
            AVY LIR++YLAQFLP+HE+DRT A F C+GQ L A GK+VV PGW++ ++E+  +  G+
Sbjct  394  AVYRLIRSHYLAQFLPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEP-QAEDGD  452

Query  421  REAHAP------QSLPALQQGQDYAVGEITLKDQQTQPPKPFTEGDLIKAMKNVAKLVDD  474
             E++++       +LP L +G    V+++ LK  +T PPKP+T+G+L+K+MK VAKLV D
Sbjct  453  GEGDTAVRAQVLPALPKLYEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSD  512

Query  475  PRLKQKLKDTTGIGTEATRAGIIQGLLDRGYLVRQGKALAATPAAFSLIDAVPRPIADPG  534
            PRLKQKLKDT GIGTEATRA II GL+ RGYLV++G+A+ A+ AAF+LIDAVP +IADPG
Sbjct  513  PRLKQKLKDTVGIGTEATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPG  572

Query  535  TTAIWEQALDMVQSGEMPLEEFVAKQSAWMSKLVERCAGLRMTISGPPVAA  585
            TTA+WEQALDM+++G++ L+ F++KQ+AW+S+L+ + ++  ++I  P  +A
Sbjct  573  TTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIAQYGSASLSIKVPQGPA  623

94) plu1037 in NC_005126


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  611 bits (2309),  Expect = 3e-176, Method: Compositional matrix adjust.
 Identities = 333/677 (50%), Positives = 492/677 (73%), Gaps = 5/677 (0%)

Query  1    MKLFLCEKPSQGRDIAVVLGATKRGQGYLTGPGVTVTWAVGHLLETASPEVYGEQYGAPW  60
            M+LFLCEKPSQG+DI+ +LGAT+RG+G L G+GVTVTW +GHL+E+A+PE Y+EQ    W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RASVLPILPASWQMVVKKETADQFTVICRLLKQADEVVIATDADREGEVIARELLDYCQF  120
                LPI+P  W++ VK  TA QF V+  LL +A ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGKISRLWLSALDEVSIRAALANILPGEQTASLYLAGLGRARADWLIGMNFTRLYTVKAR  180
            +G I RLWLSAL++ SIRAAL+++ P+ +T S+Y ++L+R+RADWL+GMN++RL+TV +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ECGYSDILSIGRVQTPSLALVVFRDREIIAFTAKPYWQVVADLQFDGRIFRADWVPAATY  240
            + GY ++LS+GRVQTP+L LVV RDREI  F + PYW +   L  +G  F A+WVP+ + 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIHQNVAQTVVKLCQQTGTATVLEINTKREKHAAPLAFDLGSLQQLCSKKWSMG  300
             D+  RC++Q VAQ  ++  + +G+A V+ ++T R ++++PL+FDLG+LQ++CSK+ +++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQQVLNIAQNLYETHKATTYPRTDCGYLPTAMQAEIPQVLDAVVKSDPAMRIVVDSLDRT  360
             Q+ L+IAQ LYETHKATTYPR+D GYLP +M AE+P VLD+++K+DP++R +++ LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  LISRIWNDKKITAHHGIIPTKQPCDMNKMTDDERKVYQLIRQHYLLQFLPLHEMDITEAT  420
              SR WND K+TAHHGIIPT +P  ++ M++ E  VY+LIR HYL QFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FDIGGQLFRTRGNVVIVPGWK-VLFSAGKDESASIGKDDSLGESLPSMVK---GNQCQVN  476
            F  GGQ + + G+ V++PGW+ VL  +  +++ + G     ++ LP++ K   G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  477  EATLRMLQTQPSAHFTEGTLIAAMKNAAAFVSDPQLKKVLKDNAGLGTEATRAGVLDTLF  536
            +  L+ L+T P+  +T+G L+ +MK  A +VSDP+LK+ LKD  G+GTEATRA +++ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  537  KRGYLTKKGKYIHATQIASELIAALPTALTNPGLTALWEQALDDIAQGQAELPDFMARQV  596
             RGYL KKG+ I+A++ A  LI A+P+A+++PG TA+WEQALD I  GQ  L  F+++Q 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  597  QWTQYLVEQVQAQKVVITPPPSLPCPVCGGVTRQRQGKNGVFWGCIKYPECSGVVSTVDG  656
             W   L+ Q  +  + I  P + +CP CG+ TRQR GK+G FW+C +YP+C G ++   G
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  657  KRKTRSARHKNIPKKPA  673
              K  ++R +   +K +
Sbjct  660  SSKRGASRPRRSGRKGS  676

95) Ser39006_1476 in NC_022268


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  605 bits (2287),  Expect = 2e-174, Method: Compositional matrix adjust.
 Identities = 334/678 (50%), Positives = 493/678 (73%), Gaps = 11/678 (1%)

Query  1    MRLFLCEKPSQGRDIAAVLGATKRGTGFLQGPGVTVTWAVGHLLETASPEAYGTQFARPW  60
            MRLFLCEKPSQG+DI+ +LGAT+RG G L+G+GVTVTW +GHL+E+A+PEAY+ Q+ R W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKR-W  59

Query  61   NIHALPVLPAQWQMVVKKETEDQFKAIAKLLKQVDEVVIATDADREGEVIARELLDFCQW  120
            +++ LP++P +W++ VK  T  QFK +  LL +  ++VIATDADREGE+IARE++++C  
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGPVNRLWLSALDEPSIRNGLNNIKPGNETLALYYAGLGRARADWLTGMNLTRLYTLKAR  180
            RGP++RLWLSAL+++SIR +L +++P+ ETL++Y ++L+R+RADWL GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EKGFDGVLSVGRVQTPTLALVVNRDREIAIFVPKPYWQVNAALQACGMAFVARWVPAKMY  240
            + G+DGVLSVGRVQTPTL LVV+RDREIA FV+ PYW +  +L A G +F A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  TDEEKRCVHQGIAQQVAQLCRQSGQAQVIEQEKKRETEAAPLAFSLGALQQACGKLWDMS  300
            TD+  RC++Q +AQQ  Q  R +G A+V+  E  R  E++PL+F LG+LQ+ C+K  ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQQVLDTAQSLYETHKATTYPRTDCGFLPESMREEIPLVLAALAKTDPSLTTTIATLDPR  360
             Q+ L+ AQ+LYETHKATTYPR+D G+LPESM  E+P VL +L KTDPSL + ++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHASDMGNMNDVEKRVYELIRRHYLAQFLPL--YERDVTR  418
              SR WND K+TAHHGIIPT +++ ++ M++ E  VY LIR HYLAQFLP   ++R V++
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  419  LDLSIGGQLFRTTGQVVVVPGWKVLFSSATDRKGNAQGDED------NALPSLNKGDVCT  472
              +S GGQ + +TG+ VV+PGW+ +++ +    G+++GD         ALP L  G  C 
Sbjct  420  --FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  473  VTVAEVKDLKTKAPLYFTFDTLIAAMMNAASYVTDLQLKKVLKENAGLGTEATRASIIDT  532
            V+  ++K LKT +P  +T + L+ +M   A  V+D +LK+ LK+  G+GTEATRA+II+ 
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  533  LLKRGYIVMNRRYLRATEVAMDLMDALPAPLKEPGMTALWEQALDEVAAGRMRLEDFMAR  592
            L+ RGY+V + R +RA++ A  L+DA+PA++ +PG TA+WEQALD + AG++ L+ F+++
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  593  QTGWTRQLVAQGLAQNMVIRLPPTPVCPLCGSKTRLRRGEKKAFYRCEKYPSCKGVVNVP  652
            Q++W  QL+AQ  + ++ I++P  P CP CG+ TR R G   +F  C +YP CKG + V 
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

Query  653  DQVKRKSAKSTSRKPKQN  670
                +++A    R  ++ 
Sbjct  658  SGSSKRGASRPRRSGRKG  675

96) W5S_3544 in NC_017845


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  604 bits (2282),  Expect = 4e-174, Method: Compositional matrix adjust.
 Identities = 332/675 (50%), Positives = 499/675 (74%), Gaps = 6/675 (0%)

Query  1    MRLFICEKPSQARDIAAVIGATKRGQGFLSAPGITITWARGHLLETASPEVYGTQFEKPW  60
            MRLF+CEKPSQ++DI+ ++GAT+RG+G L+++G+T+TW  GHL+E+A+PE Y+ Q+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RIDVLPVLPPVWQMVVKPESLDQFTVISRLLKQVDEVVISTDADREGEVIGWSLLEYCGW  120
             ++ LP++P  W++ VKP +  QF V+  LL +  ++VI+TDADREGE+I++ ++E CG 
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGPVFRLWLSALDESSIRTALAAIKPGAETKPLYYAGLGRSRADWLIGMNLTRLYTVKAR  180
            RGP+ RLWLSAL+++SIR+AL+ ++P+AET ++Y ++L+RSRADWL+GMNL+RL+TV +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DKGYDGLLSVGRVQTPVLAMVVNREREIAAFVPKPYWQVWVALQSNGVRFSAQWVPAKMY  240
            + GYDG+LSVGRVQTP L +VV+R+REIA FV+ PYW + V+L + G  F+AQWVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  VDEEKRCIHQGIAQQVAQLCKQTGKATVIEQETKREKEAAPLAFTMGTLQQACGRLWDMS  300
             D+  RC++Q +AQQ  Q  + +G A V+  ET R +E++PL+F +GTLQ+ C++  ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQKVLDIAQSLYETHKATSYPRTDCGFLPESMREEIPDVLSALVKIDPSLQELIPQLDTR  360
             Q  L+IAQ+LYETHKAT+YPR+D G+LPESM  E+P VL +L+K DPSL+ ++ QLD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWDDKNITAHHGIIPTRHVSDMSKMSEQEKQVYLLIRRHYLAQFLPLHEVDATRLS  420
              SR W+D ++TAHHGIIPT + + +S MSE+E  VY LIR HYLAQFLP HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LNIGGQLFQTTGRVVVVPGWKRLFSQ-QDDGEHKESAADEKDQSLPMLVK---GDNCAVT  476
            ++ GGQ + +TG+ VV+PGW++++++ Q ++ + E+ +  + Q LP L K   G  C V+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  477  GAEVKALKTKPPQYFTFQSLIAAMMNAAAYVTDLTLKKVLKENAGLGTEATRGGIVETLL  536
            + ++KALKT PP+ +T   L+ +M   A  V+D  LK+ LK+  G+GTEATR+ I+  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  537  ARNFIIIKGRYLRATDIAMDLIDALPHALKEPGMTALWEQALDEVAKGKMTLDNFMSRQT  596
            AR +++ KGR +RA+D A  LIDA+P A+ +PG TA+WEQALD +  G++TLD F+++Q+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  597  QWICQLVSLGAQQDVVVRVPPTPACPLCGSKTRLRKGVKGSFYGCEKYPDCKGMINI-PG  655
             WI QL++  +   + ++VP  PACP CG+ TR R G  G+F +C +YPDCKG + + +G
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  656  QGKNTAPKTRKKKQN  670
             +K  A++ R+  ++
Sbjct  660  SSKRGASRPRRSGRK  674

97) Pecwa_0618 in NC_013421


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  603 bits (2278),  Expect = 1e-173, Method: Compositional matrix adjust.
 Identities = 335/675 (50%), Positives = 501/675 (75%), Gaps = 7/675 (1%)

Query  1    MRLFICEKPSQARDIAAVLGATKRGQGFLSAPGITITWARGHLLETASPEVYGTQFEKPW  60
            MRLF+CEKPSQ++DI+ +LGAT+RG+G L+++G+T+TW  GHL+E+A+PE Y+ Q+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RIDVLPVLPPVWQMVVKSESSDQFTVISRLLKQVDEVVISTDADREGEVIGWSLLEYCGW  120
             ++ LP++P  W++ VK+ ++ QF V+  LL +  ++VI+TDADREGE+I++ ++E CG 
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGPVFRLWLSALDESSIRAALAAIKPGSETKPLYYAGLGRSRADWLIGMNLTRLYTVKAR  180
            RGP+ RLWLSAL+++SIRAAL+ ++P++ET ++Y ++L+RSRADWL+GMNL+RL+TV +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DKGYDGLLSVGRVQTPVLAMVVNREREIATFVPKPYWQVWVALQSNGVRFSAQWVPAKMY  240
            + GYDG+LSVGRVQTP L +VV+R+REIA FV+ PYW + V+L + G  F+AQWVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  VDEEKRCIHQDIAQQVAQLCKQTGKATVIEQETKREKEAAPLAFTMGTLQQACGRLWDMS  300
             D+  RC++Q +AQQ  Q  + +G A V+  ET R +E++PL+F +GTLQ+ C++  ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQKVLDIAQSLYETHKATSYPRTDCGFLPESMREEIPDVLSALVKIDPSLQALISQLDTR  360
             Q  L+IAQ+LYETHKAT+YPR+D G+LPESM  E+P VL +L+K DPSL+++++QLD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWDDKKMTAHHGIIPTRHVCDMSKMSDQEKQVYVLIRRHYLAQFFPLHEVDFTRLS  420
              SR W+D K+TAHHGIIPT +   +S MS++E  VY LIR HYLAQF+P HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LNIGGQLFQTTGRVVVVPGWKRLFSQDDGEHKEAAADE--KDQSLPMLVK---GDNCGVA  475
            ++ GGQ + +TG+ VV+PGW++++++ ++E+ ++ +D   + Q LP L K   G  C VA
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  476  GSEVKALKTKPPQYFTFQSLIAAMMNAAAYVTDLTLKKVLKENAGLGTEATRGGIVETLL  535
            + ++KALKT PP+ +T   L+ +M   A  V+D  LK+ LK+  G+GTEATR+ I+  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  536  ARNFISIKGRYLRATDIAMDLIDALPHALKEPGMTALWEQALDEVAKGRMTLDSFMSRQT  595
            AR ++  KGR +RA+D A  LIDA+P A+ +PG TA+WEQALD +  G++TLD F+++Q+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  596  QWICQLVSLGTQQDVVVRVPPTPACPLCGSKTRLRKGAKGAFYGCEKYPDCKGMINV-PG  654
             WI QL++      + ++VP  PACP CG+ TR R G  G+F +C +YPDCKG + V +G
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  655  QSKNAASKTRKKKQN  669
             SK +AS+ R+  ++
Sbjct  660  SSKRGASRPRRSGRK  674

98) UMN179_00372 in NC_015460


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  600 bits (2268),  Expect = 6e-173, Method: Compositional matrix adjust.
 Identities = 336/672 (50%), Positives = 499/672 (75%), Gaps = 23/672 (3%)

Query  1    MKLILCEKPSQGRDIGKFIGATKRGEGYLSSPDQQTFVTWGIGHLVEQAEPQDYDESYKK  60
            M+L+LCEKPSQG+DIG+++GAT+RGEG L++++    VTW IGHLVE A P+ YDE  K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WIFDNLPIIPDKWIMKVKKETAKQYKIVMGLIKKANHIVIATDPDREGEVIARELLDMAN  120
            W  ++LPIIP+ W + VK  TA Q+K+V +L+ KA H+VIATD+DREGE+IARE++++  
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YKGKVQRLWLSALDDGSIRKALANLKSDAETKPLYAAGLARGRADWLVGMNLTRLFTLIA  180
            Y+G ++RLWLSAL+D+SIR AL++L++ AET ++Y ++LAR+RADWLVGMNL+RLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QKQGYQGVMSVGRVQSPTLAIVVQRDREIENFVSKPFYRLKVNL----DGFCAYWQPTES  236
            ++ GY+GV+SVGRVQ+PTL +VV+RDREI  FVS P+  + V+L      F A W P ++
Sbjct  179  RQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDA  238

Query  237  VCDDEGRCIDYSVITQVQRQL--SKTLKIDNIETKRKKEMPPLAFDLGTLQQTCSRLFGM  294
              DD GRC+  +V  Q  +Q+  + +  + ++ET R +E PPL+FDLGTLQ+ CS+ +G+
Sbjct  239  CTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGL  298

Query  295  GAAQVLKIAQSLYETHKATTYPRTDCGYLPESMIDEIPLVLKAVSESDPQVRNIVAKLDI  354
            +  + L IAQ+LYETHKATTYPR+D GYLPESM+ E+P VL ++  +DP +R+I+++LD 
Sbjct  299  DVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDR  358

Query  355  SLRSRVWNDSKITAHHGIIPTTQKVDLSKMSDDELKVYQLVRKHYFAQFLPLYEEDNTSV  414
            S RSR WND+K+TAHHGIIPT +   LS MS+ EL VY+L+R HY+AQFLP  E D T  
Sbjct  359  SQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVA  418

Query  415  LLSGNEQTFVSKGKQVIKIGWKSLFQQDRNEDDEEQ-----------SLPSLRQGQSCNV  463
             +S   Q + + GKQV+  GW+ ++ + + ED++ +           +LP L +G +C+V
Sbjct  419  KFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQV  478

Query  464  VDSEVLTLKTTPPKHYTEGTLIAAMKNAARFVTDARLKQRLRETEGLGTEATRAEVIETL  523
             D ++ +LKT PPK YT+G L+ +MK  A++V+D+RLKQ+L++T G+GTEATRA++I  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  524  FKRGYLEKKRKEIVATSAGRSLIDGLPDIIKDPGMTALWEQALNDIASGKMLLQDFMAKQ  583
            + RGYL KK + I A+ A+ +LID++P  I DPG TA+WEQAL+ I +G++ L+ F++KQ
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  584  NQFISHVVKSMIGSGSVAIQVKAEKICPKCGAAMRRRKGKNGDFWGCSNYPTCTA---IE  640
               IS+++ +  GS+S++I+V     CP+CGA+ R+R GK+G FW+CS YP C +   +E
Sbjct  599  AAWISQLI-AQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

Query  641  NIGSRKRVGKSR  652
            + +S++  +++R
Sbjct  658  SGSSKRGASRPR  669

99) SPAB_05347 in NC_010102


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  598 bits (2260),  Expect = 3e-172, Method: Compositional matrix adjust.
 Identities = 342/659 (52%), Positives = 484/659 (74%), Gaps = 8/659 (1%)

Query  1    MRLFICEKPSQGRDLANVLGATRRGDGFLTGPGVTVTWAVGHLLETAPPEAYGQQYGKPW  60
            MRLF+CEKPSQG+D++ +LGAT+RG+G L G+GVTVTW +GHL+E+APPEAY++Q  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   SLSALPILPSPWQVVVKKETKSQFKVIERLLRQVDDVVISTDADREGEVIARELLEYCRW  120
            S+  LPI+P  W+V VK  T +QFKV+  LL +  ++VI+TDADREGE+IARE++E C  
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  DGPVQRLWLSALDEMSIRAALQDLRPGAETLGMYHAGLGRARADWLIGMNLSRLYTLLAV  180
             GP++RLWLSAL++ SIRAAL  LRP+AETL+MYH++L+R+RADWL+GMNLSRL+T+L+ 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  QSGFDGVISVGRVQTPTLALVVRRDREIATFVPKPFWQVKALLSAGGRTFPAQWVPAKVY  240
            Q+G+DGV+SVGRVQTPTL LVV RDREIA FV+ P+W +   L AGG TF+AQWVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  TDEEKRCVHQNIAQQVAHLCRQAGAATVTECETKREKAAAPLAFSLGTLQQACGLLWDMS  300
            TD+  RC++Q +AQQ  +  R AG+A V   ET R + ++PL+F LGTLQ+ C+   ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQQVLDTAQSLYEKHKATTYPRTDCGYLPESMREEIPSVLSAIGLSDPECSSLLSGLNTS  360
             Q+ L+ AQ+LYE HKATTYPR+D GYLPESM  E+P+VL ++  +DP   S+++ L+ S
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTRNAFKFSALSEAERRVYTLIRRNYLAQFLPLHESDITRLQ  420
              SR WND K+TAHHGIIPT ++ K+SA+SE E  VY LIR +YLAQFLP HE D T  +
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FDIGGQLFRTTGRTEIVMGWK-VLFSKEEEDSAGDDDLSI------ELPPLRQGDRCGVN  473
            F  GGQ + +TG+  ++ GW+ VL   + ED+ G++D ++       LP L +G  C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  474  GAEVVQQMTRPPAHYTFATLIGAMMNASAFVTDIALRKVLKDNAGLGTEATRAGIVEQLL  533
            + ++    T PP  YT + L+ +M   + +V+D  L++ LKD  G+GTEATRA I+  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  534  NRRFIVRKGKQLRATDLGADVIDALPSQLTDPGMTALWEQALDEVAEGRLTLNDFLQRQV  593
             R ++V+KG+ +RA+D +  +IDA+P+ ++DPG TA+WEQALD +  G+LTL+ F+ +Q 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  594  GWTRNLVSMGGQQRVSIRIPPTPSCPLCGGKTRLKKGQKGEFWGCTRYPDCKGIINNDT  652
            +W  +L++  G   +SI++P  P+CP CG+ TR + G+ G FW+C+RYPDCKG +  ++
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

100) topB in NC_012125


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  595 bits (2249),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 329/655 (51%), Positives = 487/655 (75%), Gaps = 9/655 (1%)

Query  1    MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLLETAEPEVYGEQYGKPW  60
            MRL LCEKPSQG+DI+++LGATQRGEG LNG+GVTVTW  GHL+E+A PE Y+EQ  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATDADREGEVIARELLDYCKF  120
              + LP++PQ+W++ VK+ + +QF V++ LL +  ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGRSRADWLIGMNLTRLFTLLGR  180
            +G + RLW+SAL+DASIR+AL+ L+PS+ T S+Y ++++RSRADWL+GMNL+RLFT+LGR
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFEVIATMAVNGVLFPSKWVPAAQY  240
            +AG + VLSVGRVQTPTL +VV RDREI  FVS PY  +  ++   G  F+++WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERKKQSAPLAFSLSTLQQACSRHWGMP  300
             D+  RC++  VA Q +Q  R + +A +++ + ER ++++PL+F L+TLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMREEIPQVLSAVVGTDPALQPVVASLDTQ  360
             Q  L+IAQ LYETHK TTYPR+D GYLP SM  E+P VL +++ TDP+L+++++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHTGDLSKLSDAERNVYQLVRLHYLAQFLPQMEIDVTEAT  420
              SR WND K+TAHHGIIPT + + LS +S+ E  VY+L+R HYLAQFLP+ E+D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGNVLVKPGWKSLFGKMSEDDEDNTGET--------TLPAMQAGQVCQVQ  472
            F+ GGQ + + G+ +V PGW+ +++    +D D  G+T        +LP +  G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAALKKVLKENAGIGTEATRAGIIDTLL  532
            + + K L+T PP PY +G L+ +M   A +V+D+ LK+ LK+  GIGTEATRA II+ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  KRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGLTALWEQMLDEVAAGRVSLDDFMAKQS  592
             RG+LV+  ++++++  +  L+D +P+++++PG TA+WEQ LD + AG+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKTLQRNGKSGLFWGCLKYPECKGIV  647
             W+SQL+AQ  S +L+++ P +P+CP CG+ T QR+GKSG FW+C +YP+CKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

101) topB in NC_003198


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  595 bits (2249),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 329/655 (51%), Positives = 487/655 (75%), Gaps = 9/655 (1%)

Query  1    MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLLETAEPEVYGEQYGKPW  60
            MRL LCEKPSQG+DI+++LGATQRGEG LNG+GVTVTW  GHL+E+A PE Y+EQ  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATDADREGEVIARELLDYCKF  120
              + LP++PQ+W++ VK+ + +QF V++ LL +  ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGRSRADWLIGMNLTRLFTLLGR  180
            +G + RLW+SAL+DASIR+AL+ L+PS+ T S+Y ++++RSRADWL+GMNL+RLFT+LGR
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFEVIATMAVNGVLFPSKWVPAAQY  240
            +AG + VLSVGRVQTPTL +VV RDREI  FVS PY  +  ++   G  F+++WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERKKQSAPLAFSLSTLQQACSRHWGMP  300
             D+  RC++  VA Q +Q  R + +A +++ + ER ++++PL+F L+TLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMREEIPQVLSAVVGTDPALQPVVASLDTQ  360
             Q  L+IAQ LYETHK TTYPR+D GYLP SM  E+P VL +++ TDP+L+++++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHTGDLSKLSDAERNVYQLVRLHYLAQFLPQMEIDVTEAT  420
              SR WND K+TAHHGIIPT + + LS +S+ E  VY+L+R HYLAQFLP+ E+D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGNVLVKPGWKSLFGKMSEDDEDNTGET--------TLPAMQAGQVCQVQ  472
            F+ GGQ + + G+ +V PGW+ +++    +D D  G+T        +LP +  G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAALKKVLKENAGIGTEATRAGIIDTLL  532
            + + K L+T PP PY +G L+ +M   A +V+D+ LK+ LK+  GIGTEATRA II+ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  KRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGLTALWEQMLDEVAAGRVSLDDFMAKQS  592
             RG+LV+  ++++++  +  L+D +P+++++PG TA+WEQ LD + AG+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKTLQRNGKSGLFWGCLKYPECKGIV  647
             W+SQL+AQ  S +L+++ P +P+CP CG+ T QR+GKSG FW+C +YP+CKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

102) STBHUCCB_44830 in NC_016832


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  595 bits (2249),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 329/655 (51%), Positives = 487/655 (75%), Gaps = 9/655 (1%)

Query  1    MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLLETAEPEVYGEQYGKPW  60
            MRL LCEKPSQG+DI+++LGATQRGEG LNG+GVTVTW  GHL+E+A PE Y+EQ  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATDADREGEVIARELLDYCKF  120
              + LP++PQ+W++ VK+ + +QF V++ LL +  ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGRSRADWLIGMNLTRLFTLLGR  180
            +G + RLW+SAL+DASIR+AL+ L+PS+ T S+Y ++++RSRADWL+GMNL+RLFT+LGR
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFEVIATMAVNGVLFPSKWVPAAQY  240
            +AG + VLSVGRVQTPTL +VV RDREI  FVS PY  +  ++   G  F+++WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERKKQSAPLAFSLSTLQQACSRHWGMP  300
             D+  RC++  VA Q +Q  R + +A +++ + ER ++++PL+F L+TLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMREEIPQVLSAVVGTDPALQPVVASLDTQ  360
             Q  L+IAQ LYETHK TTYPR+D GYLP SM  E+P VL +++ TDP+L+++++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHTGDLSKLSDAERNVYQLVRLHYLAQFLPQMEIDVTEAT  420
              SR WND K+TAHHGIIPT + + LS +S+ E  VY+L+R HYLAQFLP+ E+D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGNVLVKPGWKSLFGKMSEDDEDNTGET--------TLPAMQAGQVCQVQ  472
            F+ GGQ + + G+ +V PGW+ +++    +D D  G+T        +LP +  G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAALKKVLKENAGIGTEATRAGIIDTLL  532
            + + K L+T PP PY +G L+ +M   A +V+D+ LK+ LK+  GIGTEATRA II+ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  KRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGLTALWEQMLDEVAAGRVSLDDFMAKQS  592
             RG+LV+  ++++++  +  L+D +P+++++PG TA+WEQ LD + AG+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKTLQRNGKSGLFWGCLKYPECKGIV  647
             W+SQL+AQ  S +L+++ P +P+CP CG+ T QR+GKSG FW+C +YP+CKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

103) topB in NC_004631


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  595 bits (2249),  Expect = 2e-171, Method: Compositional matrix adjust.
 Identities = 329/655 (51%), Positives = 487/655 (75%), Gaps = 9/655 (1%)

Query  1    MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLLETAEPEVYGEQYGKPW  60
            MRL LCEKPSQG+DI+++LGATQRGEG LNG+GVTVTW  GHL+E+A PE Y+EQ  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATDADREGEVIARELLDYCKF  120
              + LP++PQ+W++ VK+ + +QF V++ LL +  ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGRSRADWLIGMNLTRLFTLLGR  180
            +G + RLW+SAL+DASIR+AL+ L+PS+ T S+Y ++++RSRADWL+GMNL+RLFT+LGR
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFEVIATMAVNGVLFPSKWVPAAQY  240
            +AG + VLSVGRVQTPTL +VV RDREI  FVS PY  +  ++   G  F+++WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERKKQSAPLAFSLSTLQQACSRHWGMP  300
             D+  RC++  VA Q +Q  R + +A +++ + ER ++++PL+F L+TLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMREEIPQVLSAVVGTDPALQPVVASLDTQ  360
             Q  L+IAQ LYETHK TTYPR+D GYLP SM  E+P VL +++ TDP+L+++++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHTGDLSKLSDAERNVYQLVRLHYLAQFLPQMEIDVTEAT  420
              SR WND K+TAHHGIIPT + + LS +S+ E  VY+L+R HYLAQFLP+ E+D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGNVLVKPGWKSLFGKMSEDDEDNTGET--------TLPAMQAGQVCQVQ  472
            F+ GGQ + + G+ +V PGW+ +++    +D D  G+T        +LP +  G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAALKKVLKENAGIGTEATRAGIIDTLL  532
            + + K L+T PP PY +G L+ +M   A +V+D+ LK+ LK+  GIGTEATRA II+ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  KRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGLTALWEQMLDEVAAGRVSLDDFMAKQS  592
             RG+LV+  ++++++  +  L+D +P+++++PG TA+WEQ LD + AG+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKTLQRNGKSGLFWGCLKYPECKGIV  647
             W+SQL+AQ  S +L+++ P +P+CP CG+ T QR+GKSG FW+C +YP+CKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

104) TY21A_21555 in NC_021176


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  595 bits (2247),  Expect = 3e-171, Method: Compositional matrix adjust.
 Identities = 328/655 (51%), Positives = 486/655 (75%), Gaps = 9/655 (1%)

Query  1    MRLVLCEKPSQGRDIAKFLGATQRGEGFLNGPGVTVTWARGHLLETAEPEVYGEQYGKPW  60
            MRL LCEKPSQG+DI+++LGATQRGEG LNG+GVTVTW  GHL+E+A PE Y+EQ  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RTDVLPLLPQQWKLVVKADAKAQFAVINRLLKQVDEVVIATDADREGEVIARELLDYCKF  120
              + LP++PQ+W++ VK+ + +QF V++ LL +  ++VIATDADREGE+IARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  QGRVFRLWMSALDDASIRSALADLWPSSRTESLYYAGVGRSRADWLIGMNLTRLFTLLGR  180
            +G + RLW+SAL+DASIR+AL+ L+PS+ T S+Y ++++RSRADWL+GMNL+RLFT+LGR
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGIGNVLSVGRVQTPTLAIVVKRDREIDNFVSKPYFEVIATMAVNGVLFPSKWVPAAQY  240
            +AG + VLSVGRVQTPTL +VV RDREI  FVS PY  +  ++   G  F+++WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQSGVAAQVVQLCRQTPTAAIINCQIERKKQSAPLAFSLSTLQQACSRHWGMP  300
             D+  RC++  VA Q +Q  R + +A +++ + ER ++++PL+F L+TLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLDIAQKLYETHKLTTYPRTDCGYLPLSMREEIPQVLSAVVGTDPALQPVVASLDTQ  360
             Q  L+IAQ LYETHK TTYPR+D GYLP SM  E+P VL +++ TDP+L+++++ LD  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKHTGDLSKLSDAERNVYQLVRLHYLAQFLPQMEIDVTEVT  420
              SR WND K+TAHHGIIPT + + LS +S+ E  VY+L+R HYLAQFLP+ E+D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGNVLVKPGWKSLFGKMSEDDEDNTGET--------TLPAMQAGQVCQVQ  472
            F+ GGQ + + G+ +V PGW+ +++    +D D  G+T        +LP +  G  CQV 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GAEQKVLQTKPPAPYNDGTLIAAMTNAAAFVTDAALKKVLKENAGIGTEATRAGIIDTLL  532
            + + K L+T PP PY +G L+ +M   A +V+D+ LK+ LK+  GIGTEATRA II+ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  KRGFLVREKKTLKSTPLGRNLVDVLPGTLTNPGLTALWEQMLDEVAAGRVSLDDFMAKQS  592
             RG+LV+  ++++++  +  L+D +P+++++PG TA+WEQ LD + AG+++LD F++KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWVSQLVAQGRSQPLTMQAPPSPPCPVCGGKTLQRNGKSGLFWGCLKYPECKGIV  647
             W+SQL+AQ  S +L+++ P +P+CP CG+ T QR+GKSG FW+C +YP+CKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

105) Spro_4107 in NC_009832


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  591 bits (2231),  Expect = 5e-170, Method: Compositional matrix adjust.
 Identities = 346/661 (53%), Positives = 490/661 (75%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPTQWKMTVKKETADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ VK  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRATLQKGGIAFPASWVPAANY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+IA F+S PYW +  +L  GG +F+A WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQLCQQTGHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q  + +G A V+ V TER +E++PL+FDLGTLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQALSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTQSGSVARLDRT  360
             +++L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+  + +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEVVAGWKVLFQHDVSEAKEESTDTDDVR---LPALVK---GETVAV  474
            F+ GGQ + + GK  V++GW+ ++ +  +E  +   DT  VR   LPAL K   G +  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I+  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKYLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKAQAVKFtappsppcptcsGTMRRRAGKKGSGAFWGCSNYPTCQGIINI  654
            A W ++L+ +  + ++ +  P +P+CP C++  R+R+GK  SG+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGK--SGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

106) PMI2630 in NC_010554


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  590 bits (2230),  Expect = 6e-170, Method: Compositional matrix adjust.
 Identities = 327/678 (49%), Positives = 485/678 (72%), Gaps = 3/678 (0%)

Query  1    MKLFLCEKPSQAKDIARVIGAHQRRDNFFQGNGVQVAWARGHLLEQAEPEAYGAQFAAPW  60
            M+LFLCEKPSQ+KDI+R++GA QR +  ++G+GV V+W  GHL+E A PEAY+ Q+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLK-RW  59

Query  61   RQSALPVIPEQWKMVVKKDAVSLFQTIKQLLSQATEVVIATDADREGEVIARELLEACHY  120
                LP+IP++W++ VK  + + F+ +K LL++AT++VIATDADREGE+IARE++E C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RKKVQRLWLSALDEASIRQALNNLLPGEKTASLYSAGLGRARADWLIGMNMTRLFTLKAR  180
            R  ++RLWLSAL++ASIR AL +L P+  T S+Y ++L+R+RADWL+GMN++RLFT+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ELGFGGILSVGRVQTPTLALIVRREREITHFVSKPFWRVTASLQHQGIIFQAHWRPASQY  240
            + G++G+LSVGRVQTPTL L+V R+REI++FVS P+W ++ SL   G  F A+W P+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDDEHRCIHVQAAQAVEQLCRQAGKATVCTVNETKGKALPPLPFDLGTLQQAASRRWGYS  300
             DD  RC++   AQ   Q  R AG A V +V+  + +  PPLPFDLGTLQ+  S++ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ADKVLEIAQSLYEKHKATTYPRTDCGYLPVSMRADIPVVLDALSQSDPALQNVLAQLQPA  360
             +  LEIAQ+LYE HKATTYPR+D GYLP SM A++P VLD+L ++DP+L+++++QL+ +
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  RISRVWNDAKITAHHAIIPTRQTPDLNAMNEAELNVYKLIRAHYLAQFLPDQEWDATEVF  420
            + SR WND+K+TAHH+IIPT + + L+AM+E EL VY+LIR+HYLAQFLP++E D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LDIGGQQFVAKGKVERVKGWSVLFVKHEDDPPVKeeaetgleagtetlPSLHEGEFCVVQ  480
            +  GGQ++ A GK   + GW  ++   + +    E   +       +LP L EG  C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  481  EAKVVQLATSPPKPYTDGTLIAAMKNASSFITDPTLKKVLKENAGLGTEATRAGIITTLE  540
            +  +  L T PPKPYT+G L+ +MK  + +++DP LK+ LK+  G+GTEATRA II  L 
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  541  NRKLIVRQKKTLRATDTGCQLIDALPAACTDPGMTALWEQSLEQVAQGNLSLDVFMQKQI  600
             R  +V++ +++RA+D++  LIDA+PAA +DPG TA+WEQ+L+ +  G+L+LDVF+ KQ 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  601  SWLAHLIKKGGEMPLALDLPPMPSCPSCHGKMVLRESSKGRFWSCQRYPDCKGSVPLPEK  660
            +W+++LI + G  +L++ +P  P+CP C +    R +  G FWSC RYPDCKG++P+   
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES-  658

Query  661  MQGVTRGMNKRKKAVKKS  678
              +  RG ++ +++ +K+
Sbjct  659  -GSSKRGASRPRRSGRKG  675

107) topB in NC_014304


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  585 bits (2209),  Expect = 3e-168, Method: Compositional matrix adjust.
 Identities = 325/655 (50%), Positives = 477/655 (73%), Gaps = 7/655 (1%)

Query  1    MQLYLCEKPSQAKDIARVLGVSQRGQGCINGGNITVTWAVGHLLETATPEIYGEQFGRPW  60
            M+L+LCEKPSQ+KDI+R+LG +QRG+GC+NG+ +TVTW +GHL+E+A PE Y+EQ+ R W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKR-W  59

Query  61   RAEVLPIIPDRWQMTVKKDTADQFAVIKKLLKQASEVVIATDADREGEVIARELMEYCNY  120
              E LPIIP++W++ VK  TA QF V+K LL +A+++VIATDADREGE+IARE++E C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGAVRRLWLSALDEASIKKALGEMLPGDKTEMLYQAGVGRSRADWLIGMNLTRLYTLKAG  180
            RG++ RLWLSAL++ASI+ ALG + P+  T  +Y+++++RSRADWL+GMNL+RL+T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGVSEVFSVGRVQTPTLAIVVNRDLEIAGFTPKPWWKVRAQLQKDDVSFEAEWVAAAQY  240
            +AG   V+SVGRVQTPTL +VV+RD EIA F + P W +   L  ++ +F A+WV++   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDDEKRCVNHPIAQAVQQLCQKAGSGSVISVEKKRDKTPAPLCFTLGTLMEVCNKKWGFG  300
             DD  RC+ +P+AQ   Q  + AGS+ V+SVE  R +  +PL F LGTL EVC+K+ G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANEVLSIAQSLYETHKATTYPRTDCGYLPVSMREEVRDVLQAIQHSDPSITPELARLDTA  360
             +E L IAQ+LYETHKATTYPR+D GYLP SM  EV  VL+++  +DPS+ + +++LD +
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FTSRVWNDKKITAHHAIIPTRQPFEIAKLNAKELKVYSLIRLHYLAQFMPLQESDVTDAT  420
              SR WND K+TAHH+IIPT +P  ++ ++ KEL VY LIR HYLAQF+P +E D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGNQLFRTRGRVMIHAGWKSLFSGQLSEEGEEDKESAAQ------LPALEQGSVCSVT  474
            F+ G Q + + G+ ++ +GW+ +++   +E+G+ + ++A +      LP L +G  C V+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  475  GADVKDNMTKAPPHHTEGTLIAAMKNAASLVTDPQLKKVLRDNAGLGTEATRSGVLETLF  534
            + D+K   T +P   T+G L+ +MK  A LV+DP+LK+ L+D  G+GTEATR+ ++  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  535  KRGFLEKKGKFIQATQMARELIAALPETLTSPGMTALWEQALDDIAQGKSGLSDFMQKQT  594
             RG+L KKG+ I+A++ A  LI A+P +++ PG TA+WEQALD I  G+  L  F+ KQ+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  595  QWTRHLIEKGRVAAFKITVPVGPSCPKCGGPTQQRKNKEDKFWGCMKFPDCKGIV  649
             W  +LI +   A++ I VP GP+CP+CG+PT+QR  K + FW+C ++PDCKG +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

108) EJP617_06860 in NC_017445


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  584 bits (2205),  Expect = 5e-168, Method: Compositional matrix adjust.
 Identities = 335/657 (51%), Positives = 481/657 (74%), Gaps = 7/657 (1%)

Query  1    MRLFICEKPSQGRDLAAVLGATQRGDGFLAGSGITVTWAVGHLLETAPPEAYGQQYGKPW  60
            MRLF+CEKPSQG+D++ +LGATQRG+G L GSG+TVTW +GHL+E+APPEAY++Q  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   TLAALPIIPSPWQVVVKKETQHQFKIIERLLRQVDEVIIATDADREGEVIARELLDYCRW  120
            ++  LPIIP  W+V VK  T  QFK++  LL +  +++IATDADREGE+IARE+++ C  
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  EGPVQRLWLSSLDELSIRAALQNLRPGGETLGMYHAGLGRARADWLTGMNLSRLYTLRAA  180
             GP++RLWLS+L++ SIRAAL +LRP++ETL+MYH++L+R+RADWL GMNLSRL+T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGFDGVVSVGRVQSPTLALVVRRDREIAAFVPKPYWQVKAQLSAGGITFPAQWVPAKVY  240
            +AG+DGV+SVGRVQ+PTL LVV RDREIA FV+ PYW +   L AGG TF+AQWVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  TDEEKRCIHQNIAQQVVQICRQSGEATVTECETKREKASPPLAFSLGTLQQAASRLWDMS  300
            TD+  RC++Q +AQQ +Q  R +G A V   ET R + +PPL+F LGTLQ+  S+  ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQQVLDTAQSLYEKHKATSYPRTDCGYLPESMREEIPALLDAIGRTDPECLPLLSQLDAS  360
             Q+ L+ AQ+LYE HKAT+YPR+D GYLPESM  E+P++LD++ +TDP   ++++QLD S
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  LVSRIWNDKKITAHHGIIPTRNAFQLSALSETERQVYMLIRRNYLAQFLPLHESDITRLA  420
              SR WND K+TAHHGIIPT ++ +LSA+SE E  VY LIR +YLAQFLP HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FDIGGQLFRTTGRTEVVKGWKVLFGKaeeeg---saaddeavvaLPPLKK---DDRCGVT  474
            F  GGQ + +TG+  V+ GW+ +++ ++ E+    +        LP+L K   +  C V+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  475  GAEVVQLMTRPPAHYTFATLIGAMMNAAAFVTDVALRKVLKDNAGLGTEATRAGIVEQLL  534
            + ++  L T PP  YT + L+ +M   A +V+D  L++ LKD  G+GTEATRA I+  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  535  NRRFIVRKSSKLLATDLGSDVIDSLPPQLTEPGMTALWEQALDEVAAGRMSLSDFLQRQT  594
             R ++V+K+  + A+D +  +ID++P+ +++PG TA+WEQALD + AG+++L  F+ +Q+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  595  GWTRNLVSQGAQQQVSIRIPPTPPCPLCGGKTRLRKGQKGDFWSCQRYPDCKGVINI  651
            +W  +L++Q +   +SI++P  P+CP CG+ TR R G+ G FWSC RYPDCKG + +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPV  656

109) topB3 in NC_016816


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  578 bits (2183),  Expect = 3e-166, Method: Compositional matrix adjust.
 Identities = 335/660 (51%), Positives = 480/660 (73%), Gaps = 9/660 (1%)

Query  1    MRLFLCEKPSQGRDLAAVLGATRRGEGFLTGNGVTVTWAVGHLLETAPPEVYGQQYGKPW  60
            MRLFLCEKPSQG+D++ +LGAT+RGEG L G+GVTVTW +GHL+E+APPE Y++Q  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   SLSVLPILPSRWQVVVKKDTQDQFKVIEKLLRQADEVVIATDADREGEVIARELLDYCGW  120
            S+  LPI+P +W+V VK  T  QFKV+  LL +A ++VIATDADREGE+IARE+++ CG 
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  EGRILRLWFSALDELSVRAALSDLRPGQASVGMYHAGLGRSRADWLVGMNLSRLYTLRAA  180
             G I RLW+SAL++ S+RAAL+ LRP+  +++MYH++L+RSRADWLVGMNLSRL+T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGFEGVVSVGRVQTPTLALVVRRDREIAAFVPKPFWQVKAVLSASGVSFQASWVPAAVY  240
            +AG++GV+SVGRVQTPTL LVV RDREIA FV+ P+W +   L A+G +F A WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  TDEEKRCIHQNIAQQVAQLCRQAGVATVTEYETKREKEAAPLVFSLGTLQRACGRMWNMS  300
            TD+  RC++Q +AQQ  Q  R AG A V   ET R +E++PL F LGTLQ  C++   + 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQQVLDTAQSLYETHKATTYPRTNCGWLPESMREEIPAVFDAMARTDPSPEFASLLSQLD  360
             Q+ L+ AQ+LYETHKATTYPR++ G LPESM  E+P+V+D++ +TDPS  + S+++QLD
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPS--LRSIMGQLD  357

Query  361  RGFVSRIWNDKKITAHHGIIPTRNAVQLSGLTETERQVYLLIRRNYLAQFLPLCESDATR  420
            R+  SR WND K+TAHHGIIPT ++ +LS+++E E  VY LIR +YLAQFLP  E D T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  421  ISFDIGGQLFRTTGRTEVLKGWKVLFTKDEENKNAADDENA------GALPPLRKGAQCG  474
              F  GGQ + +TG+  V+ GW+ +++  + +   ++++ A       ALP L  G  C 
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  475  VTGAEVKQLMTQPPAHFTFDTLIGAMMNAAAYVTDLQLRKILKENAGLGTEATRAGIIEQ  534
            V++ ++K L T PP  +T + L+ +M   A  V+D +L++ LK+  G+GTEATRA II  
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  535  LLSRRFITLKGSKLLATDLGADVIDALPAQLTDPGMTALWEQALDEVAAGRMNLNDFLQR  594
            L++R ++  KG  + A+D +  +IDA+PA ++DPG TA+WEQALD + AG++ L+ F+ +
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  595  QTAWTATLVSQGMQQRISIRVPPSPPCPLCGSKTALRRSPKGEFRSCTRYPECKGIISLD  654
            Q+AW + L++Q     +SI+VP +P+CP CG+ T  R +  G F+SC+RYP+CKG ++++
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

110) Spro_0310 in NC_009832


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2180),  Expect = 5e-166, Method: Compositional matrix adjust.
 Identities = 339/661 (52%), Positives = 488/661 (74%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPTQWKMAVKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ VK  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDITNFISKPYWQVRATLQKGGITFPANWVPAANY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+I+ F+S PYW +  +L  GG TF+A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQRCQQTAHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q+ + ++ A V+ V TER +E++PL+FDLGTLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTLNESVARLDRA  360
             ++ L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+L   +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQYLSLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQ+L+ HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEAVAGWKVLFQHDVSEAKEEPADTDDVR---LPALVK---GETVAV  474
            F+ GGQ + + GK   ++GW+ ++ +  +E  +  +DT  VR   LPAL K   G +  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILDTL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I++ L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKYLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKTQAVKFtappsppcptcsGSMrrragkkgggaFWGCSNYPTCQGVINI  654
            A W ++L+ +  + ++ +  P +P+CP C+++   R     +G+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAP--TRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

111) SerAS12_0272 in NC_015566


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2180),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 340/661 (52%), Positives = 487/661 (74%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPTQWKMAIKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ +K  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRGTLQKGGIAFPANWVPAANY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+IA F+S PYW +  +L  GG +F+A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQRCQQTAHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q+ + ++ A V+ V TER +E++PL+FDLGTLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTLNESVARLDRA  360
             ++ L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+L   +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEAVAGWKVLFQHDVSEAKEEPADTDDVR---LPALVK---GETVAV  474
            F+ GGQ + + GK   ++GW+ ++ +  +E  +  +DT  VR   LPAL K   G +  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I+  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKYLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKTQAVKFtappsppcptcsGSMrrragkkgggaFWGCSNYPTCQGVINI  654
            A W ++L+ +  + ++ +  P +P+CP C+++   R     +G+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAP--TRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

112) SerAS13_0271 in NC_017573


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2180),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 340/661 (52%), Positives = 487/661 (74%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPTQWKMAIKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ +K  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRGTLQKGGIAFPANWVPAANY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+IA F+S PYW +  +L  GG +F+A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQRCQQTAHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q+ + ++ A V+ V TER +E++PL+FDLGTLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTLNESVARLDRA  360
             ++ L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+L   +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEAVAGWKVLFQHDVSEAKEEPADTDDVR---LPALVK---GETVAV  474
            F+ GGQ + + GK   ++GW+ ++ +  +E  +  +DT  VR   LPAL K   G +  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I+  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKYLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKTQAVKFtappsppcptcsGSMrrragkkgggaFWGCSNYPTCQGVINI  654
            A W ++L+ +  + ++ +  P +P+CP C+++   R     +G+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAP--TRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

113) SerAS9_0272 in NC_015567


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2180),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 340/661 (52%), Positives = 487/661 (74%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPTQWKMAIKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ +K  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRGTLQKGGIAFPANWVPAANY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+IA F+S PYW +  +L  GG +F+A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQRCQQTAHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q+ + ++ A V+ V TER +E++PL+FDLGTLQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTLNESVARLDRA  360
             ++ L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+L   +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEAVAGWKVLFQHDVSEAKEEPADTDDVR---LPALVK---GETVAV  474
            F+ GGQ + + GK   ++GW+ ++ +  +E  +  +DT  VR   LPAL K   G +  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I+  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKYLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKTQAVKFtappsppcptcsGSMrrragkkgggaFWGCSNYPTCQGVINI  654
            A W ++L+ +  + ++ +  P +P+CP C+++   R     +G+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAP--TRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

114) NT01EI_0325 in NC_012779


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2179),  Expect = 6e-166, Method: Compositional matrix adjust.
 Identities = 330/655 (51%), Positives = 476/655 (73%), Gaps = 9/655 (1%)

Query  1    MQLYLCEKPSQAKDIARVLGISKRGQGFISADNITVTWAIGHLLEQASPDAYGEQFGKPW  60
            M+L+LCEKPSQ+KDI+R+LG ++RG+G +++  +TVTW IGHL+E A+P+AY+EQ+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RVDVLPVLPDNWKMVVKPQTRDQFTVISKLLKQAGEVIIATDADREGEVIARELLAYCGY  120
             V+ LP++P++W++ VKP+T  QF V+  LL +A +++IATDADREGE+IARE++  CGY
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGAVRRLWLSALDEASIREALAGILPGENTAKLYDAGLGRSRADWLIGMNLTRLYTLIAR  180
            RG++ RLWLSAL++ASIR AL+ + P+ +T  +Y+++L+RSRADWL+GMNL+RL+T+++R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ESGVSDVLSVGRVQTPTLAIVVNRDKEIADFVPVPWWQVQVLLEKDGVRFRATWQAAAQY  240
            ++G  +VLSVGRVQTPTL +VV+RD+EIA FV+VP W + V L  +G  F A W ++   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDDEKRCVNKQAANAVGQLCQQQKGATVLEVSQKRDKTPAPLCFDLGTLQLVCSRKFGMG  300
             DD  RC+ +  A+   Q  +   +A V+ V   R +  +PL FDLGTLQ VCS+++G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AKETLAVAQSLYETHKATTYPRTDCGYLPTSMQKEIPEVMGSVAKSDPSVAPVLAQLDRG  360
             +ETL +AQ+LYETHKATTYPR+D GYLP SM  E+P V++S+ K+DPS+ ++++QLDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYQLIRQHYFAQFLPLQESDVTDAS  420
              SR WND K+TAHH+IIPT ++  LS +S  EL VY+LIR HY+AQFLP +E D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFLAKGKVNVITGWTCLFQKEIQEDPPEDDDMA-----LPALNK---GDSCIVN  472
            F+ GGQ + A GK  VI GW  ++     ED   ++D A     LPAL K   G +C V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  473  GASVGDKVTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAGVLETLF  532
            +  +    T PPKP+T+G L+ +MK  A +VSDP+LK+ L+D  G+GTEATRA ++  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  533  SRHYLEKKGKHIHATLLARELIAALPETLTSPGMTALWEQALDDIAQGKMSLDTFIQKQL  592
            +R YL KKG+ I+A+  A  LI A+P +++ PG TA+WEQALD I  G+++LD FI KQ 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  593  QWTRHLVDKGRADTVKITAPVTPPCPVCKGLTRKRKGKNGDFWGCIRYPECNGIV  647
             W  +L+ +  + ++ I  P  P+CP C + TR+R GK+G FW+C RYP+C+G +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTL  654

115) PAGR_g3879 in NC_017554


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  577 bits (2178),  Expect = 8e-166, Method: Compositional matrix adjust.
 Identities = 335/677 (50%), Positives = 489/677 (73%), Gaps = 10/677 (1%)

Query  1    MRLFLCEKPSQGRDLAAVLGASRRGEGFMTGNGVTVTWAVGHLLETAPPEVYGQQYGKPW  60
            MRLFLCEKPSQG+D++ +LGA++RGEG + G+GVTVTW +GHL+E+APPE Y++Q  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   SLSALPILPSRWQVVVKKDTQDQFKVIEKLLRQADEVVIATDADREGEVIARELLDYCGW  120
            S+  LPI+P +W+V VK  T  QFKV+  LL +A ++VIATDADREGE+IARE+++ CG 
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  DGRILRLWFSALDELSVRAALSDLRPGQASVGMYHAGLGRSRADWLIGMNLSRLYTLRAA  180
             G I RLW+SAL++ S+RAAL+ LRP+  +++MYH++L+RSRADWL+GMNLSRL+T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EAGFEGVVSVGRVQTPTLALVARRDREIAAFVPKPYWQVKATLSASGVSFQASWVPAAVY  240
            +AG++GV+SVGRVQTPTL LV  RDREIA FV+ PYW +  +L A+G +F A WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  ADEEKRCIHQNIAQQVAQLCRQAGVSTVTEYETKREKEAAPLAFSLGTLQRACGKMWNMS  300
            +D+  RC++Q +AQQ  Q  R AG + V   ET R +E++PL+F LGTLQ  C+K   + 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQKVLDTAQSLYETHKATTYPRTDCGWLPKSMREEIPAVFDAMARTDPSPEFASLLSQLD  360
             Q  L+ AQ+LYETHKATTYPR+D G LP SM  E+P+V+D++ +TDPS  + S+++QLD
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPS--LRSIMGQLD  357

Query  361  RGFASRIWNDKKITAHHGIIPTRNAVQLSSLTETERQVYLLIRRNYLAQFLPLCESDATR  420
            R+  SR WND K+TAHHGIIPT ++ +LS+++E E  VY LIR +YLAQFLP  E D T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  421  ISFDIGGQLFRTTGRTEVLKGWKVLFtkdeed------kdtaeedIAGSLPPLSKGAQCG  474
              F  GGQ + +TG+  V+ GW+ +++  + +        +   ++  +LP L  G  C 
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  475  VTDAEVKQLMTQPPAHYTFDTLIGAMMNAAAYVTDLQLRKILKENAGLGTEATRAGIIEQ  534
            V+D ++K L T PP  YT + L+ +M   A  V+D +L++ LK+  G+GTEATRA II  
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  535  LLSRRFITLKGSKLLATDLGADVIDALPPQLTDPGMTALWEQALDEVAAGRMNLNDFLQR  594
            L++R ++  KG  + A+D +  +IDA+P+ ++DPG TA+WEQALD + AG++ L+ F+ +
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  595  QTAWTSTLVSQGMQQRISIRVPPSPPCPLCGSKTALRRSPKGEFRSCTRYPECKGIISLD  654
            Q+AW S L++Q     +SI+VP +P+CP CG+ T  R +  G F+SC+RYP+CKG ++++
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

Query  655  SG-RRKSPARAKSPKTK  670
            SG  +++++R++ +  K
Sbjct  658  SGSSKRGASRPRRSGRK  674

116) F382_13480 in NC_021743


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  574 bits (2167),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 318/655 (49%), Positives = 477/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKR  60
            M+LF+CEKPSQ++D++ +LGAT +G+G L  N+ ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCL--NGSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q++VV +L+ KA+ +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  ++AV L  A++ TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+  G A V++VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES ++EVP V+ SL+ +D+ L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLETDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  IATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEK-------QGLPALTANQQC  473
            +A +  +G+ L A G+ +V  GWR +++    ED +++++         +LP L     C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  RVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFLIKKKKSLMASAEAIALIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQ  593
            GLI +G+L+KK +++ AS  A++LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  RQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWGCTGYPDCQ  648
            +Q + + QLI++    ++S+   +   CP+CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

117) J451_13720 in NC_021739


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  574 bits (2167),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 318/655 (49%), Positives = 477/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKR  60
            M+LF+CEKPSQ++D++ +LGAT +G+G L  N+ ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCL--NGSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q++VV +L+ KA+ +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  ++AV L  A++ TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+  G A V++VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES ++EVP V+ SL+ +D+ L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLETDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  IATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEK-------QGLPALTANQQC  473
            +A +  +G+ L A G+ +V  GWR +++    ED +++++         +LP L     C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  RVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFLIKKKKSLMASAEAIALIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQ  593
            GLI +G+L+KK +++ AS  A++LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  RQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWGCTGYPDCQ  648
            +Q + + QLI++    ++S+   +   CP+CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

118) D648_10880 in NC_020834


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  574 bits (2167),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 318/655 (49%), Positives = 477/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKR  60
            M+LF+CEKPSQ++D++ +LGAT +G+G L  N+ ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCL--NGSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q++VV +L+ KA+ +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  ++AV L  A++ TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+  G A V++VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES ++EVP V+ SL+ +D+ L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLETDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  IATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEK-------QGLPALTANQQC  473
            +A +  +G+ L A G+ +V  GWR +++    ED +++++         +LP L     C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  RVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFLIKKKKSLMASAEAIALIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQ  593
            GLI +G+L+KK +++ AS  A++LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  RQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWGCTGYPDCQ  648
            +Q + + QLI++    ++S+   +   CP+CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

119) D650_16670 in NC_020833


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  574 bits (2167),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 318/655 (49%), Positives = 477/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKR  60
            M+LF+CEKPSQ++D++ +LGAT +G+G L  N+ ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCL--NGSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q++VV +L+ KA+ +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  ++AV L  A++ TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+  G A V++VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES ++EVP V+ SL+ +D+ L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLETDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  IATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEK-------QGLPALTANQQC  473
            +A +  +G+ L A G+ +V  GWR +++    ED +++++         +LP L     C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  RVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFLIKKKKSLMASAEAIALIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQ  593
            GLI +G+L+KK +++ AS  A++LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  RQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWGCTGYPDCQ  648
            +Q + + QLI++    ++S+   +   CP+CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

120) N220_08395 in NC_021883


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  574 bits (2167),  Expect = 6e-165, Method: Compositional matrix adjust.
 Identities = 318/655 (49%), Positives = 477/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGHLVEQYQPEDYDEVWKR  60
            M+LF+CEKPSQ++D++ +LGAT +G+G L  N+ ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCL--NGSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q++VV +L+ KA+ +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAHYSLAVQLATASDETFVAGLSIP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  ++AV L  A++ TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVETKREKKAPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+  G A V++VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQLTEVPMVIRSLVAADSELQTLLPRL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES ++EVP V+ SL+ +D+ L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLQQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLETDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  IATLQSSGHTLIARGNVIVSQGWRILFGKNADEDVGSDDEK-------QGLPALTANQQC  473
            +A +  +G+ L A G+ +V  GWR +++    ED +++++         +LP L     C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  RVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFLIKKKKSLMASAEAIALIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDDFMQ  593
            GLI +G+L+KK +++ AS  A++LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  RQETFVRQLIGNCMQQGMSLGNIEIRKCPECGKPMRKINHAKGTFWGCTGYPDCQ  648
            +Q + + QLI++    ++S+   +   CP+CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

121) YPZ3_0299 in NC_014029


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  572 bits (2158),  Expect = 3e-164, Method: Compositional matrix adjust.
 Identities = 339/661 (52%), Positives = 483/661 (74%), Gaps = 10/661 (1%)

Query  1    MQLYLCEKPSQGKDIGAILGATQRKQGYLVGAGVIVTWAIGHLLEQAQPETYGEQFGSPW  60
            M+L+LCEKPSQGKDIG ILGATQR +G L G+GV VTW IGHL+E A PE+Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RESVLPIVPAQWKMAVKKDTADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHF  120
                LPI+P +W++ VK  TA QF V+++LL +   +VIATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLARSRADWMTGMNLTRLYTLKAR  180
             GP++RLWLSAL++ASIR AL++  P+  T ++Y+++LARSRADW+ GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRTMLQKDGIAFPANWVPAVNY  240
            + GY+ VLS+GRVQTPTL LVV+RDR+IA F+S PYW +   L  +G +F+A+WVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCIQQNVAQAVVQLCQQTANAVVLDVGTERKKESAPLAFDLGILQQACSRKWGMS  300
             D+  RC++Q VAQ  +Q  + +++A V+ V TER +E++PL+FDLG LQ+ CS++ G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANQVLSIAQSLYETHKATTYPRTDCGYLPTSMREEVADVLSAVTRTDPTQSESVARLDRT  360
             ++ L IAQ+LYETHKATTYPR+D GYLP SM  EV+ VL ++ +TDP+    +++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLIRQHYLAQFLPLHEVDVTEAT  420
              SR WND K+TAHHGIIPT +P  LS +S  EL VY+LIR HYLAQFLP HE D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVEAVAGWKALFQHDASEAKEEPADTDDVR---LPALVK---GEAVSV  474
            F+ GGQ + + GK   ++GW+ ++ +  +E  +  +DT  VR   LPAL K   G A  V
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDT-AVRAQVLPALPKLYEGLACQV  478

Query  475  AGAELKTLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETL  534
            A+ +LK+L+T PP  +T+G L+ +MK  A +VSDP+LK+ LK+  G+GTEATRA I+  L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  535  FKRGYLEKKGKFLLSTPIAGELIDALPTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQ  594
            + RGYL KKG+ + ++  A  LIDA+P+A+++PG TA+WEQALD I  GQ+TLD F+++Q
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  595  AQWTGHLVEKGKAQAVKFtappsppcptcsGTMrrragkkgggaFWGCSNYPTCQGIINI  654
            A W ++L+ +  + ++ +  P +P+CP C++    R     +G+FW+CS YP C+G + +
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAP--TRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  655  D  655
            +
Sbjct  657  E  657

122) topB in NC_017641


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  569 bits (2148),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 329/658 (50%), Positives = 480/658 (73%), Gaps = 5/658 (0%)

Query  1    MQLYLCEKPSQARDIARVLGLSGRGEGCIEGDTVTVTWAVGHLLELAAPEAYGEQFGVPW  60
            M+L+LCEKPSQ++DI+R+LG + RGEGC++G  VTVTW +GHL+E A+PEAY+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLK-RW  59

Query  61   RMESLPVLPEKWQMTVKPQTKSQFTVISRLLKRASEVVIATDADREGEVIARELLTYCRY  120
             +E LP++P+ W++ VKP+T +QF V+  LL +A+++VIATDADREGE+IARE++  C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  RGPVRRLWLSALDEASVREALANILPGEQTARLYDAGLARGQADWLIGMNLTRLYTLKAR  180
            RGP+ RLWLSAL++AS+R AL+++ P+ +T  +Y+++LAR++ADWL+GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  VSGIPDVLSVGRVQTPTLAMVVRRDQEIAGFVPRPWWQVFVGLEKDGIRFRAVWVAAEQY  240
             +G  +VLSVGRVQTPTL +VV RD+EIA FV+ P W + V+L  +G  F A WV+++  
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCVNVQAARAVLQLCQQTPSAVVHEVTRKREKTPAPLCFSLGTLQEACSRKFGMG  300
             D+  RC+    A+  +Q  + + SA V  V   R +  +PL F LGTLQE CS+++G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AQTVLNIAQSLYETHKATTYPRTDCGYLPESMQQESREVLAAMARSDPALTPVLAQLDPG  360
             Q  L+IAQ+LYETHKATTYPR+D GYLPESM  E   VL ++ ++DP+L ++++QLD +
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHAIIPTRQVFDIRALSEDELKVYLLIRQHYLAQFLPLQESDITDAT  420
              SR WND K+TAHH+IIPT +   + A+SE EL VY LIR HYLAQFLP +E D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  LTLGGQRFRARGKVNVVTGWRGLFSgeaaedaegedeQTT-EMALPALER---GEHCRIS  476
            ++ GGQ + A GK  V+ GWR +++   AED++GE++ +     LPAL +   G  C+++
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  477  GSELKGRMTSPPAPFTEGTLIAAMKNAASQVSDPKLKKVLRENAGLGTEATRAGVLEVLF  536
            + +LK+  T PP P+T+G L+ +MK  A  VSDP+LK+ L++  G+GTEATRA ++  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  537  ARQYLEKSGKHIRSTQRGRELTAALPEALTSPGMTALWEQALDDIAQGRMSLDTFMGRQQ  596
            AR YL K G+ IR+++ +  L  A+P A++ PG TA+WEQALD I  G+++LD F+G+Q 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  597  QWVRHLVSSGREQPFSMTVPVMPPCPLCQGPTRQRKGKHGLFRSCQRYPECKGVVNTQ  654
             W+ +L++     ++S+ VP  P+CP C +PTRQR GK G F+SC RYP+CKG +  +
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVE  657

123) topA in NC_008309


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  569 bits (2147),  Expect = 2e-163, Method: Compositional matrix adjust.
 Identities = 328/670 (49%), Positives = 484/670 (73%), Gaps = 18/670 (2%)

Query  1    MKLFLCEKPSQGRDIAKVLGATQKGEGYLSTADGTIVVTWARGHLVEHFSPEQYDPALKA  60
            M+LFLCEKPSQG+DI+++LGATQ+GEG L+ ++  + VTW  GHLVE  +PE YD  LK 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WRLDTLPIIPSQWQVSPKPDAKKEYKTVMTLLKKARTVVISTDIDREGETIARELLDLAG  120
            W ++ LPIIP +W+V  KP +  ++K V +LL KA  +VI+TD DREGE IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGHIQRLWITALDEISVRKALSRLKTNEETLPLYYAGLARSRADWLIGMNFSRMFTLLA  180
            YRG I+RLW++AL++ S+R AL++L+ + ETL++Y ++LARSRADWL+GMN+SR+FT+L+
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QQQGYQGPPLSVGRVQSPTLALVVNRDKEIAHFVPTYHYALMVQVCGTNAQSFEASLLVP  240
            +Q GY+G  LSVGRVQ+PTL LVV+RD+EIA+FV+    A+ V + +  + +F A  + P
Sbjct  179  RQAGYDGV-LSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGS-TFAAQWVPP  236

Query  241  EQYCDEEGRCLEIKVLqqaeqqirqagqVCVQNVETKREKESPPLLFALSDLQAECNRLY  300
            +   D+ GRCL   V QQ+ QQIR AG   V +VET R +E+PPL F L+ LQ  C++  
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  DLGTQQVLDIAQSLYEKHKATTYPRTDCGYLPEAQLLEVPQVINSLMQSDAKLQPLRVQL  360
            +L+ Q+ L+IAQ+LYE HKATTYPR+D GYLPE+ + EVP V++SL+++D+ L+++  QL
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLSQKSRAWNDKKITAHHGIIPTTQPVDIAKMNENEFKVYDLIRRRYLAQFLPHFEVDKT  420
            + SQ+SRAWND K+TAHHGIIPT +P  ++ M+E+E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  RVRLSCGEHQCIAKGQVIVSAGWKALFRASKEEQGEKQG-----------LPILNSGQML  469
              ++SCG ++  A G+ +V +GW+ ++  ++ E+G+ +G           LP L  G   
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  470  KVMNTEIKSLKTTPPAHYTEGTLLTAMVNVARFVTDERLKKQLRETEGLGTEATRASIMK  529
            +V + ++K+LKT PP  YT+G L+ +M  VA++V+D RLK++L++T G+GTEATRA+I+ 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  530  TLYDRGYIKKKGKSIVATDAGVMLIDNLPTVLKDPGLTALWEQALNQIAENQMSLQEFMQ  589
             L  RGY+ KKG++I A+DA+  LID +P+ + DPG TA+WEQAL+ I   Q++L+ F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  590  KQEQFVLHLIQTCGHQGIKMGNIDIKKCPQCGKPLRKMKGKNGDFLGCTGYPKCK---YI  646
            KQ   + +LI   G  ++ +   +   CPQCG P R+  GK+G F +C+ YP CK    +
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  647  ESGAKRKTSA  656
            ESG+ ++ ++
Sbjct  657  ESGSSKRGAS  666

124) topB2 in NC_016809


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  565 bits (2135),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 338/654 (52%), Positives = 470/654 (72%), Gaps = 13/654 (1%)

Query  1    MKLFLCEKPSQGNDIAKVLGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKK  60
            M+LFLCEKPSQG+DI+++LGAT+RGEGCL+ ++  +TVTW IGHLVE   PE YD  +K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPGKWGLSPKKETKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAG  120
            W+ E LPIIP  W +  K  T  QF+VV  L+ +A  +VIATD DREGE IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  FRGQIKRLWLSALDDTSIRKALGALKNNEETLPLYYAGLARSRADWLIGMNFSRLYTLLA  180
            +RG I RLWLSAL+D+SIR ALG L+ + ETL++Y ++LARSRADWL+GMN+SRL+T+L+
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE  240
            +Q GY+G  LSVGRVQTPTL LVV+RDREI  F++    A+ V L  G   FA+Q V P+
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPD  237

Query  241  QYCDPDGLCLSAQVIQAANQQIRQFGQAKVESVETKRERQNAPLCFALSDLQSEANRLYG  300
               D  G CL   V Q + QQIR  G A V SVET R R+ +PL F L+ LQ   ++  G
Sbjct  238  ACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLG  297

Query  301  LGAQRVLDIAQSLYETHKATTYPRTDCGYLPESQFAEAPQIIQCLLQSDNRLHPLAGMLN  360
            L+ Q  L+IAQ+LYETHKATTYPR+D GYLPES FAE P +++ LL++D  L+++ G L+
Sbjct  298  LDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLD  357

Query  361  LNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYDLIRRRYLAQFLPVSETDKTQ  420
             +Q+SR WND K+TAHHGIIPT+  A +S MS+ EL +Y LIR +YLAQFLP  E D+T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  421  IILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAP----------QALPTLKQGQICQ  470
              + CG + L+A G+ ++ PGW+ +++ +  ED+D+            ALP L +G  CQ
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  471  ISDSEIKTLQTSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQg  530
            ++D ++K+L+T PP+ +T+G L+ +MK  A++V+D RLKQ+L++T G+GTEATRA  I G
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  531  lidkgflkkkgksllATDEAMTLIDNLPQMLKDPGLTALWEQALNQIAERTLSLEVFMQK  590
            LI +G+L KKG+++ A+D A TLID +P  + DPG TA+WEQAL+ I    L+L+VF+ K
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  591  QEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFFGCSAYPNCQ  644
            Q   + +L+A+    ++S+   +   CP+CGAP  +R+GK+G+F +CS YP+C+
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

125) topB2 in NC_007146


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  565 bits (2135),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 338/654 (52%), Positives = 470/654 (72%), Gaps = 13/654 (1%)

Query  6    MKLFLCEKPSQGNDIAKVLGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKK  65
            M+LFLCEKPSQG+DI+++LGAT+RGEGCL+ ++  +TVTW IGHLVE   PE YD  +K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  66   WAFETLPIIPGKWGLSPKKETKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAG  125
            W+ E LPIIP  W +  K  T  QF+VV  L+ +A  +VIATD DREGE IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  126  FRGQIKRLWLSALDDTSIRKALGALKNNEETLPLYYAGLARSRADWLIGMNFSRLYTLLA  185
            +RG I RLWLSAL+D+SIR ALG L+ + ETL++Y ++LARSRADWL+GMN+SRL+T+L+
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  186  QQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE  245
            +Q GY+G  LSVGRVQTPTL LVV+RDREI  F++    A+ V L  G   FA+Q V P+
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPD  237

Query  246  QYCDPDGLCLSAQVIQAANQQIRQFGQAKVESVETKRERQNAPLCFALSDLQSEANRLYG  305
               D  G CL   V Q + QQIR  G A V SVET R R+ +PL F L+ LQ   ++  G
Sbjct  238  ACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLG  297

Query  306  LGAQRVLDIAQSLYETHKATTYPRTDCGYLPESQFAEAPQIIQCLLQSDNRLHPLAGMLN  365
            L+ Q  L+IAQ+LYETHKATTYPR+D GYLPES FAE P +++ LL++D  L+++ G L+
Sbjct  298  LDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLD  357

Query  366  LNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYDLIRRRYLAQFLPVSETDKTQ  425
             +Q+SR WND K+TAHHGIIPT+  A +S MS+ EL +Y LIR +YLAQFLP  E D+T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  426  IILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAP----------QALPTLKQGQICQ  475
              + CG + L+A G+ ++ PGW+ +++ +  ED+D+            ALP L +G  CQ
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  476  ISDSEIKTLQTSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQg  535
            ++D ++K+L+T PP+ +T+G L+ +MK  A++V+D RLKQ+L++T G+GTEATRA  I G
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  536  lidkgflkkkgksllATDEAMTLIDNLPQMLKDPGLTALWEQALNQIAERTLSLEVFMQK  595
            LI +G+L KKG+++ A+D A TLID +P  + DPG TA+WEQAL+ I    L+L+VF+ K
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  596  QEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFFGCSAYPNCQ  649
            Q   + +L+A+    ++S+   +   CP+CGAP  +R+GK+G+F +CS YP+C+
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

126) topB in NC_017451


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  565 bits (2135),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 338/654 (52%), Positives = 470/654 (72%), Gaps = 13/654 (1%)

Query  1    MKLFLCEKPSQGNDIAKVLGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKK  60
            M+LFLCEKPSQG+DI+++LGAT+RGEGCL+ ++  +TVTW IGHLVE   PE YD  +K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPGKWGLSPKKETKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAG  120
            W+ E LPIIP  W +  K  T  QF+VV  L+ +A  +VIATD DREGE IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  FRGQIKRLWLSALDDTSIRKALGALKNNEETLPLYYAGLARSRADWLIGMNFSRLYTLLA  180
            +RG I RLWLSAL+D+SIR ALG L+ + ETL++Y ++LARSRADWL+GMN+SRL+T+L+
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE  240
            +Q GY+G  LSVGRVQTPTL LVV+RDREI  F++    A+ V L  G   FA+Q V P+
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPD  237

Query  241  QYCDPDGLCLSAQVIQAANQQIRQFGQAKVESVETKRERQNAPLCFALSDLQSEANRLYG  300
               D  G CL   V Q + QQIR  G A V SVET R R+ +PL F L+ LQ   ++  G
Sbjct  238  ACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLG  297

Query  301  LGAQRVLDIAQSLYETHKATTYPRTDCGYLPESQFAEAPQIIQCLLQSDNRLHPLAGMLN  360
            L+ Q  L+IAQ+LYETHKATTYPR+D GYLPES FAE P +++ LL++D  L+++ G L+
Sbjct  298  LDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLD  357

Query  361  LNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYDLIRRRYLAQFLPVSETDKTQ  420
             +Q+SR WND K+TAHHGIIPT+  A +S MS+ EL +Y LIR +YLAQFLP  E D+T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  421  IILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAP----------QALPTLKQGQICQ  470
              + CG + L+A G+ ++ PGW+ +++ +  ED+D+            ALP L +G  CQ
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  471  ISDSEIKTLQTSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQg  530
            ++D ++K+L+T PP+ +T+G L+ +MK  A++V+D RLKQ+L++T G+GTEATRA  I G
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  531  lidkgflkkkgksllATDEAMTLIDNLPQMLKDPGLTALWEQALNQIAERTLSLEVFMQK  590
            LI +G+L KKG+++ A+D A TLID +P  + DPG TA+WEQAL+ I    L+L+VF+ K
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  591  QEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFFGCSAYPNCQ  644
            Q   + +L+A+    ++S+   +   CP+CGAP  +R+GK+G+F +CS YP+C+
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

127) topB in NC_013892


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  564 bits (2129),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 307/669 (46%), Positives = 478/669 (72%), Gaps = 12/669 (1%)

Query  1    MPLYLCEKPSQARDIARVLGVKQRGQGYLFGDSITVTWAIGHLLEMAAPEHYGEQFGPPW  60
            M L+LCEKPSQ++DI+R+LG  QRG+G L G ++TVTW IGHL+E A+PE Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RMEPLPVLPVQWQWTVKKETADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRF  120
             +E LP++P +W+  VK  TA QF V++ LL +A +++IATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVRRLWLSALDETSIRQALAAILLGEQTEPLWQAGLGRARADWLMGINLTRLYTLKAQ  180
             GP+ RLWLSAL+++SIR AL+ +  + +T ++ +++L+R+RADWL+G+NL+RL+T+ ++
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  AQGFGEVLSIGRVQTPTLALVVNRDNDIARFEPKPYWQVMAALQKDDISFRVKWLPAPDD  240
              G++ VLS+GRVQTPTL LVV+RD +IARF + PYW +  +L  ++ +F  +W+P PD 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVP-PDA  238

Query  241  C-DEEKRCIREDIAQSVVQRCQQAQDAVVTELTQKREKTPPPLCFDLGMLQQVASRQWGM  299
            C D+  RC+R+ +AQ  +Q+ + A  A V  +   R +  PPL FDLG LQ+V S+Q G+
Sbjct  239  CTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGL  298

Query  300  GAGQVLTIAQSLYEIHKATTYPRTDCGYLPVSMREDIPAVFTALTRTDPAMNAIISQLDA  359
            +  + L IAQ+LYE HKATTYPR+D GYLP SM  ++P+V+ +L +TDP++ +I++QLD 
Sbjct  299  DVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDR  358

Query  360  STLSRVWNDSQITAHHAIIPTRHTFDMTKLTADELKIYQLIRHYYLAQFLPVQETDVTDV  419
            S  SR WND+++TAHH+IIPT +   ++ ++  EL +Y+LIR  YLAQFLP +E D T  
Sbjct  359  SQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVA  418

Query  420  TFTIGGQVFQAKGRVSVVTGWKTLFADEKQVQEQDDNTA------LPALKK---EEICPV  470
             F+ GGQ + A G+  V+ GW+ ++A+ +  + +++  +      LPAL K      C V
Sbjct  419  KFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQV  478

Query  471  LRAEIQPRQTRPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRENAGLGTEATRAGIIEAL  530
               ++++ +T PP P+T+G L+ +MK  A ++ DP+LK+ L++  G+GTEATRA II +L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  531  FNRQLLARKKKNLHATPLAQELIAGLPDVLTHPGMTALWEQSLDDIARGRATLDGFMQKQ  590
            + R  L +K + ++A+  A  LI ++P  +++PG TA+WEQ+LD I  G+ TLD F+ KQ
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  591  AQWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYPACKGMLNANA  650
            A W+++L+ +  + ++ + +P+ PACP+CG+P ++R+GK+ PFW+C+RYP CKG L  ++
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

Query  651  VTGSRKTRR  659
             ++ R + R
Sbjct  659  GSSKRGASR  667

128) XBJ1_3377 in NC_013892


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  564 bits (2129),  Expect = 5e-162, Method: Compositional matrix adjust.
 Identities = 307/669 (46%), Positives = 478/669 (72%), Gaps = 12/669 (1%)

Query  1    MPLYLCEKPSQARDIARVLGVKQRGQGYLFGDSITVTWAIGHLLEMAAPEHYGEQFGPPW  60
            M L+LCEKPSQ++DI+R+LG  QRG+G L G ++TVTW IGHL+E A+PE Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RMEPLPVLPVQWQWTVKKETADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRF  120
             +E LP++P +W+  VK  TA QF V++ LL +A +++IATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVRRLWLSALDETSIRQALAAILLGEQTEPLWQAGLGRARADWLMGINLTRLYTLKAQ  180
             GP+ RLWLSAL+++SIR AL+ +  + +T ++ +++L+R+RADWL+G+NL+RL+T+ ++
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  AQGFGEVLSIGRVQTPTLALVVNRDNDIARFEPKPYWQVMAALQKDDISFRVKWLPAPDD  240
              G++ VLS+GRVQTPTL LVV+RD +IARF + PYW +  +L  ++ +F  +W+P PD 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVP-PDA  238

Query  241  C-DEEKRCIREDIAQSVVQRCQQAQDAVVTELTQKREKTPPPLCFDLGMLQQVASRQWGM  299
            C D+  RC+R+ +AQ  +Q+ + A  A V  +   R +  PPL FDLG LQ+V S+Q G+
Sbjct  239  CTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGL  298

Query  300  GAGQVLTIAQSLYEIHKATTYPRTDCGYLPVSMREDIPAVFTALTRTDPAMNAIISQLDA  359
            +  + L IAQ+LYE HKATTYPR+D GYLP SM  ++P+V+ +L +TDP++ +I++QLD 
Sbjct  299  DVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDR  358

Query  360  STLSRVWNDSQITAHHAIIPTRHTFDMTKLTADELKIYQLIRHYYLAQFLPVQETDVTDV  419
            S  SR WND+++TAHH+IIPT +   ++ ++  EL +Y+LIR  YLAQFLP +E D T  
Sbjct  359  SQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVA  418

Query  420  TFTIGGQVFQAKGRVSVVTGWKTLFADEKQVQEQDDNTA------LPALKK---EEICPV  470
             F+ GGQ + A G+  V+ GW+ ++A+ +  + +++  +      LPAL K      C V
Sbjct  419  KFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQV  478

Query  471  LRAEIQPRQTRPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRENAGLGTEATRAGIIEAL  530
               ++++ +T PP P+T+G L+ +MK  A ++ DP+LK+ L++  G+GTEATRA II +L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  531  FNRQLLARKKKNLHATPLAQELIAGLPDVLTHPGMTALWEQSLDDIARGRATLDGFMQKQ  590
            + R  L +K + ++A+  A  LI ++P  +++PG TA+WEQ+LD I  G+ TLD F+ KQ
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  591  AQWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYPACKGMLNANA  650
            A W+++L+ +  + ++ + +P+ PACP+CG+P ++R+GK+ PFW+C+RYP CKG L  ++
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

Query  651  VTGSRKTRR  659
             ++ R + R
Sbjct  659  GSSKRGASR  667

129) PARA_12090 in NC_015964


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  563 bits (2126),  Expect = 9e-162, Method: Compositional matrix adjust.
 Identities = 338/654 (52%), Positives = 470/654 (72%), Gaps = 13/654 (1%)

Query  1    MKLFLCEKPSQGNDIAKILGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKK  60
            M+LFLCEKPSQG+DI++ILGAT+RGEGCL+ ++  +TVTW IGHLVE   PE YD  +K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSG--VTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPGKWGLSPKKETKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAG  120
            W+ E LPIIP  W +  K  T  QF+VV  L+ +A  +VIATD DREGE IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  FRGQIKRLWLSALDDASIRKALGALKDNEETLPLYYAGLARSRADWLIGMNFSRIYTLLA  180
            +RG I RLWLSAL+DASIR ALG L+ + ETL++Y ++LARSRADWL+GMN+SR++T+L+
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE  240
            +Q GY+G  LSVGRVQTPTL LVV+RDREI  F++    A+ V L  G   FA+Q V P+
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPD  237

Query  241  QYCDPDGLCLSAQVIQAANQQIRQLGQAKMESVETKRERQNAPLCFALSDLQSEANRLYG  300
               D  G CL   V Q + QQIR  G A + SVET R R+ +PL F L+ LQ   ++  G
Sbjct  238  ACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLG  297

Query  301  LGAQRVLDIAQSLYETHKATTYPRTDCGYLPESQFAEAPKIIQCLLQSDNRLQPLAGMLN  360
            L+ Q  L+IAQ+LYETHKATTYPR+D GYLPES FAE P +++ LL++D  L+++ G L+
Sbjct  298  LDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLD  357

Query  361  LNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYDLIRRRYLAQFLPVSETDKTQ  420
             +Q+SR WND K+TAHHGIIPT+  A +S MS+ EL +Y LIR +YLAQFLP  E D+T 
Sbjct  358  RSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTV  417

Query  421  IILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAP----------QALPTLKQGQICQ  470
              + CG + L+A G+ ++ PGW+ +++ +  ED+D+            ALP L +G  CQ
Sbjct  418  AKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQ  477

Query  471  ISDSEIKTLQTSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQg  530
            ++D ++K+L+T PP+ +T+G L+ +MK  A++V+D RLKQ+L++T G+GTEATRA  I G
Sbjct  478  VADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGG  537

Query  531  lidkgflkkkgksllATDEAMTLIDNLPQMLKDPGLTALWEQALNQIAERTLSLEVFMQK  590
            LI +G+L KKG+++ A+D A TLID +P  + DPG TA+WEQAL+ I    L+L+VF+ K
Sbjct  538  LIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGK  597

Query  591  QEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFLGCSAYPNCQ  644
            Q   + +L+A+    ++S+   +   CP+CGAP  +R+GK+G+F +CS YP+C+
Sbjct  598  QAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

130) ECL_00407 in NC_014121


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  560 bits (2115),  Expect = 8e-161, Method: Compositional matrix adjust.
 Identities = 322/630 (52%), Positives = 463/630 (74%), Gaps = 7/630 (1%)

Query  1    MRLFICEKPSQGRDLAGVLGATRRGDGFLTGSGVTVTWAVGHLLETAPPEAYGQQYGKPW  60
            MRLF+CEKPSQG+D++ +LGAT+RG+G L GSGVTVTW +GHL+E+APPEAY++Q  K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   SLSALPILPAPWRVVVKKETQDQFKVIERLLRQVDDVVIATDADREGEVIARELLEYCRW  120
            S+  LPI+P  WRV VK  T  QFKV+  LL +  ++VIATDADREGE+IARE++E C  
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  EGPVQRLWLSALDELSIRAALQDLRPGQATLGMYHAGLGRARADWLIGMNLSRLYTLRAA  180
             GP++RLWLSAL++ SIRAAL  LRP+  TL+MYH++L+R+RADWL+GMNLSRL+T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  ESGFDGVVSVGRVQTPTLALVVRRDREIAAFVPKPFWQVKALISAGDLTFPAQWVPAKVY  240
            ++G+DGV+SVGRVQTPTL LVV RDREIA FV+ P+W +   + AG+ TF+AQWVP+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  TDEEKRCVHQNIAQQVAQLCRQTGHAVVTECDTKREKAAAPLAFSLGSLQQACGRLWDMS  300
            TD+  RC++Q +AQQ  Q  R +G A V   +T R + ++PL+F LG+LQ+ C++  ++ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  PQQVLDTAQSLYEKHKATTYPRTDCGYLPESMREEISGVLDAIGRTDPECAPVLARLDRT  360
             Q+ L+ AQ+LYE HKATTYPR+D GYLPESM  E++ VLD++ +TDP   +++++LDR+
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRIWNDKKITAHHGIIPTRNAFQLSALTETERNVYMLIRRNYLAQFLPLHESDFTRLQ  420
              SR WND K+TAHHGIIPT ++ +LSA++E E  VY LIR +YLAQFLP HE D T  +
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FDTGGQLFRATGRTEVIKGWKVLFENAGDNEVDDGDEADI------ALPPLAQNDRCAVT  474
            F  GGQ + ATG+  VI GW+ ++ ++  ++ D+ +++ +      ALP L +   C V+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  475  GAEVVQLMTRPPAHYTFATLIGAMMNAAAFVTDVALRKVLKDNAGLGTEATRAGIVEQLL  534
            + ++  L T PP  YT + L+ +M   A +V+D  L++ LKD  G+GTEATRA I+  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  535  NRHFIVRKGSKIMATELGADVIDALPPQLTEPGMTALWEQALDEVAAGRMSLDDFLQRQT  594
             R ++V+KG  I A++ +  +IDA+P+ +++PG TA+WEQALD + AG+++LD F+ +Q+
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  595  GWTRNLVSQGTQQQVRIRVPPTPACPLCGG  624
            +W  +L++Q     + I+VP  PACP CG+
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGA  629

131) CFSAN002050_22395 in NC_021818


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  558 bits (2107),  Expect = 3e-160, Method: Compositional matrix adjust.
 Identities = 322/651 (50%), Positives = 468/651 (72%), Gaps = 7/651 (1%)

Query  1    MQLFLCEKPSQAKDIARVLGISKREQGFISGGNIVVTWAVGHLLETASPEAYGEQYGRPW  60
            M+LFLCEKPSQ+KDI+R+LG ++R +G ++G+ + VTW +GHL+E+A+PEAY+EQ  R W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKR-W  59

Query  61   RADVLPVLPEAWKMVVKEQTKSQFTVISKLLKKASEVVIATDADREGEVIARELMEYCRY  120
              + LP++P+ W++ VK +T +QF V+  LL KA+++VIATDADREGE+IARE++E C Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGAVRRLWLSALDEASVKEALSSILPGEKTALLYDAGKGRSQADWLIGMNLTRLYTLKAR  180
             G++ RLWLSAL++AS++ AL+ + P+  T  +Y+++ +RS+ADWL+GMNL+RL+T+ +R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DSGVSEVLSVGRVQTPTLAMVVNRDNEITSFVPKPWWQVHALIEKEGVRFRAVWVPVEQY  240
            ++G   VLSVGRVQTPTL +VV+RD EI+ FV+ P W +   +   G  F A WVP +  
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  CDEEKRCINPQAARAVGQLCQQQGRAVVLEVTQKREKTAAPLCFDLGTLQQVCSRKFGMG  300
             D+  RC+    A+   Q  +  G A V+ V   R + ++PL FDLGTLQ+VCS+++G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  ANDVLAIAQSLYETHKATTYPRTDCGFLPTSMQQEIPDVLAAVAKSDPAVAPVLNQLDRK  360
             ++ L IAQ+LYETHKATTYPR+D G+LP SM  E+P VL ++ K+DP++ +++ QLDR 
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  FVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYHLIRQHYFAQFLPLQESDVTEAS  420
              SR WND K+TAHH+IIPT ++  LS +S  EL VY+LIR HY+AQFLP +E D T A 
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FNIGGQLFRTRGKVGVVTGWKSLF---QAekdddeedvdgdSMALPALAK---GDICAVT  474
            F+ GGQ + + GK  V+ GW+ ++   QAE +D+E D    +  LPAL+K   G  C V+
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  475  GSEVKDMKTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAAVLETLF  534
            + ++K +KT PPKP+T+G L+ +MK  A +VSDP+LK+ L+D  G+GTEATRA ++  L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  535  KRHYLEKKGKHIHSTQMARELIAALPETLTSPGMTALWEQALDDISQGKMSLAVFMQKQL  594
             R YL KKG+ I++++ A  LI A+P +++ PG TA+WEQALD I  G+++L VF+ KQ 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  595  QWTRHLVEKGRQDSVKITAPVTPPCPLCKGPTrkrkgkkgDFWGCVRYPDC  645
             W  +L+ +    S+ I  P  P+CP C +PTR+R GK G FW+C RYPDC
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDC  650

132) A79E_4459 in NC_018522


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  554 bits (2093),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 310/608 (51%), Positives = 451/608 (75%), Gaps = 11/608 (1%)

Query  1    MQLYLCEKPSQARDIARVLDARNRSDGYLHNATVTITWCFGHLLSMAAPEDYDPALKHWR  60
            M+L+LCEKPSQ++DI+R+L+A +R++G L+ + VT+TWC+GHL+  A+PE YD  LK+W 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   AEHLPFIPPAWRLVIRPEVRKQFRIIEKLLKQADAVVIATDADREGETIAREILEQCRWR  120
             E+LP+IP  WR+ ++P    QF+++  LL +A  +VIATDADREGE IAREI+E C  R
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDDASIHKALAAMRSGDSTYPLYQAGLARARADWLVGINMTRACTLMNRR  180
            GP++RLWLSAL+DASI+ AL+ +R++  T ++Y+++LAR+RADWLVG+N++R  T++ R+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  --HKGVLSVGRVQTPTLRLVVERDREISRFTPRPWWRVDARLHAEGTTFLAQWQPDGVYC  238
                GVLSVGRVQTPTL+LVV+RDREI+RF + P W +   L A G+TF AQW P +   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  239  DDEGRCIRESAAREATASLQQAGTTLVLDVTTRREKTPPPLAFTLSALQQVCSKQWGMGA  298
            DD GRC+R++ A+++   ++ AG++ V+ V T R +  PPL+F L++LQ+VCSKQ G++ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  299  QEVLDIAQRLYETHKATTYPRTDCGWLPLSMHTEAPQVLAALVASDISLQPLATQLNLQQ  358
            QE L+IAQ LYETHKATTYPR+D G LP SM +E P VL +L+ +D SL+++  QL+  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  359  HSRLWDDSKITAHHGIIPTRKTVDLTQMNDSERKVYGLVRSHFLAQFLSDHEVDKTDLRL  418
            +SR W+D+K+TAHHGIIPT     L+ M++ E  VY L+RSH+LAQFL++HE D+T  ++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  419  NCAGETLAARGSVVIVSGWQQLFLREMATHSPEETQS---------LPVLQQGQTCQVEQ  469
            +C+G+ LAA G  V+++GW+Q++    A ++  E ++         LP L +G +CQV +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  470  VDVRARQTQPPEHYTEGTLIAAMKNAARFVSDERLKQRLKENAGIGTEATRAGIIQTLLK  529
            VD++A +T PP  YT+G L+ +MK  A++VSD RLKQ+LK+  GIGTEATRA II  L+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  530  RGYLIKQRRFLLATDTASALIDALPEKLKDPGTTALWEQMLDDIATGKMGLEAFLVQQQE  589
            RGYL+K+ R + A+D+A +LIDA+P  + DPGTTA+WEQ LD I +G++ L+ F+ +Q  
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  590  TVTALTAQ  597
             ++ L AQ
Sbjct  601  WISQLIAQ  608

133) topB in NC_004547


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  553 bits (2088),  Expect = 1e-158, Method: Compositional matrix adjust.
 Identities = 306/656 (47%), Positives = 465/656 (71%), Gaps = 6/656 (0%)

Query  2    MRLFLCEKPSQGRDIARFIGATQRGKGFLSGTGTVVTWAFGHLLEVASPEEYGAQFGKPW  61
            MRLFLCEKPSQG+DI+R++GATQRG G L+G+G  VTW +GHL+E A+PE Y+ Q+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  62   RMDVLPILPTEWKMVVKQSSADQFAVISRLLKQADEVVIATDADREGEVLARELLDYCHF  121
             ++ LPI+P +W++ VK  +A QF V+  LL +A ++VIATDADREGE++ARE+++ C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  122  TGNVKRLWLSALDDASIRKGLDNLLPGEKTVRLYYAGMGRSKADWLIGMNLTRIYTLKAS  181
             G + RLWLSAL+DASIR +L++L P+  T+ +Y ++++RS+ADWL+GMNL+R++T+ + 
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  182  EQGIDELLSIGRVQTPTLALVVQRDSDIENFSPKPYWQVFADIEKAGMTFRAQWVPAAGY  241
            + G D +LS+GRVQTPTL LVV+RD +I  F + PYW +   +  +G TF AQWVP+ + 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  242  CDDEKRCIQHNAALAVEQLCKQTATTSVVDVLLKREKTPAPLCFSLSVLQKACSDKWGMI  301
             DD  RC+++  A    Q  + ++++ VV V   R +  +PL F L+ LQ  CS + G+ 
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  302  AQKVLEIAQSLYEVHKATTYPRTDCGYLPESMKGEVSDVLSAILQSDPAATSLIKDADRS  361
             Q  LEIAQ+LYE HKATTYPR+D GYLPESM +EV+ VL ++L++DP+  S++ + DRS
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  362  FVSRIWNDKKISAHHAIIPTKQPFDISKLSDDELNVYQLIRLHYFAQFFPLHESDVTDVT  421
              SR WND K++AHH+IIPT +P  +S +S+ EL VY+LIR HY+AQF+P HE D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  422  FNLGGQLFKTRGRVSVVIGWKKLFFNDKEPDIQSDENGSQ-----GSLPVLHNGDICNVL  476
            F+ GGQ + + G+  V+ GW++++ + +  D +++ + +       +LP L +G  C+V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  477  DCEVKAQQTKPPSRFTDGTLIDAMKNSASFISDPTLKKILRDNAGLGTEATRANILDVLF  536
            D ++KA +T PP  +T+G L+ +MK  A ++SDP LK+ L+D  G+GTEATRANI++ L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  537  KRNYLKRREKFIYSTQLARELISQLPEALTNPGMTALWEQALDDVAEGRMSLDAFLQKQK  596
             R YL ++ + I +++ A  LI  +P A+++PG TA+WEQALD +  G+++LD F+ KQ 
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  597  EWTLRLVDRGRQQAIKLTAPVSPLCPQCGGIMRKRNSDNGVFWGCVKYPLCKGIIS  652
             W  +L+ +    ++ +  P +P CPQCG+  R+R++ +G FW+C +YP CKG ++
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLP  655

134) XNC1_3649 in NC_014228


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  552 bits (2083),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 313/669 (47%), Positives = 481/669 (72%), Gaps = 12/669 (1%)

Query  1    MPLYLCEKPSQARDIARVLGVKQRGQGYLFGDSIIVTWAIGHLLEMAAPEHYGEQFGPPW  60
            M L+LCEKPSQ++DI+R+LG  QRG+G L G ++ VTW IGHL+E A+PE Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RMEPLPVLPAQWQWTVKKETADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRF  120
             +E LP++P +W+  VK  TA QF V++ LL +A +++IATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVRRLWLSALDETSIRQALAAILPGEKTESLWQAGLGRARADWLMGINLTRLYTLKAQ  180
             GP+ RLWLSAL+++SIR AL+ + P+  T S+ +++L+R+RADWL+G+NL+RL+T+ ++
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  AQGFGEVLSIGRVQTPTLALVVNRDNDIARFEPKPYWQVVATLQKDGIGFRVKWLPAPDD  240
              G++ VLS+GRVQTPTL LVV+RD +IARF + PYW +  +L  +G  F  +W+P PD 
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVP-PDA  238

Query  241  C-DEEKRCIKEDIAHSVVQCCQEAQNAVVTELTQKREKTPPPLCFDLGMLQQVASRQWGM  299
            C D+  RC+++ +A+  +Q  + A +A V  +   R +  PPL FDLG LQ+V S+Q G+
Sbjct  239  CTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGL  298

Query  300  GAGQVLTIAQSLYEIHKATTYPRTDCGYLPVSMREDIPAVFTALTRTDPAMNAIISQLDA  359
            +  + L IAQ+LYE HKATTYPR+D GYLP SM  ++P+V+ +L +TDP++ +I++QLD 
Sbjct  299  DVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDR  358

Query  360  STLSRVWNDSQITAHHAIIPTRHPFDMTKLTADELKVYQLIRQYYLAQFLPAQETDVTDV  419
            S  SR WND+++TAHH+IIPT +P  ++ ++  EL VY+LIR  YLAQFLP +E D T  
Sbjct  359  SQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVA  418

Query  420  TFTIGGQVFQATGRVSVVTGWKALFAD-EKQAQDQDGNTA-----LPVLKK---AETCPV  470
             F+ GGQ + ATG+  V+ GW+ ++A+ + +  D +G+TA     LP L K   + +C V
Sbjct  419  KFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQV  478

Query  471  IRAEIQPRQTRPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRENAGLGTEATRAGIIEal  530
               ++++ +T PP P+T+G L+ +MK  A ++ DP+LK+ L++  G+GTEATRA II +L
Sbjct  479  ADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGL  538

Query  531  fkrrllarkkknlhaTQLAQELIAGLPDVLTHPGMTALWEQSLDDIARGRTTLDGFMQKQ  590
            + R  L +K + ++A++ A  LI ++P  +++PG TA+WEQ+LD I  G+ TLD F+ KQ
Sbjct  539  IARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQ  598

Query  591  AQWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYPACKGMLNANA  650
            A W+++L+ +  + ++ + +P+ PACP+CG+P ++R+GK+ PFW+C+RYP CKG L  ++
Sbjct  599  AAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVES  658

Query  651  VIGSRKTRR  659
              + R + R
Sbjct  659  GSSKRGASR  667

135) A464_4533 in NC_021870


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  549 bits (2073),  Expect = 1e-157, Method: Compositional matrix adjust.
 Identities = 316/608 (52%), Positives = 456/608 (75%), Gaps = 11/608 (1%)

Query  1    MQLYLCEKPSQARDIARVLDARNRSDGYLHNATVTITWCFGHLLSMAAPEDYDPALKHWR  60
            M+L+LCEKPSQ++DI+R+L+A +R++G L+ + VT+TWC+GHL+  A+PE YD  LK+W 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   AEHLPFIPPAWRLVIRPEVRKQFRIIEKLLKQADAVVIATDADREGETIAREILEQCRWR  120
             E+LP+IP  WR+ ++P    QF+++  LL +A  +VIATDADREGE IAREI+E C  R
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GPVQRLWLSALDEASIHRALAALRPGDSTFPLYQAGLARARADWLVGINMTRACTLMNLR  180
            GP++RLWLSAL++ASI+ AL+ LRP+  T+++Y+++LAR+RADWLVG+N++R  T++  +
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  --HKGVLSVGRVQTPTLRLVVERDREIVRFTPRPYWRVDARLHTEGTSFLAQWQPDGAYC  238
                GVLSVGRVQTPTL+LVV+RDREI RF + PYW +   L + G++F AQW P +A  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  239  DDEGRCIRESVARKAAARLQQAGTALVLDVTTRREKTPPPLAFTLSALQQFCSKQWGMGA  298
            DD GRC+R++VA+++  +++ AG+A V+ V T R +  PPL+F L++LQ+ CSKQ G++ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  299  QEVLDIAQRLYETHKATTYPRTDCVYLPLSMHAEAPQvlaalvasdaslQPLATQLNLQQ  358
            QE L+IAQ LYETHKATTYPR+D  YLP SM AE P VL +L+ +D+SL+++  QL+  Q
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  359  RSRLWDDSKITAHHGIIPTRKTVDLTQLNDSERKVYGLVRSHFLAQFLPDHEVDKTDLRL  418
            RSR W+D+K+TAHHGIIPT     L+ +++ E  VY L+RSH+LAQFLP+HE D+T  ++
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  419  NCAGETLAARGSVVIVSGWRQLFLREMATQSPEE------TQVLPALQ---QGQTCQVEQ  469
            +C+G+ LAA G  V+++GWRQ++    A ++  E      +QVLPAL    +G +CQV +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  470  VDVRSRQTQPPEHYTEGTLIAAMKNAARFISDERLKQRLKENAGIGTEATRAGIIQTLLK  529
            VD+++ +T PP  YT+G L+ +MK  A+++SD RLKQ+LK+  GIGTEATRA II  L+ 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  530  RGYLIKQRRFLLATDTASTLIDALPEALKDPGTTALWEHMLDEIAMGKMGLEAFLVQQQE  589
            RGYL+K+ R + A+D+A TLIDA+P A+ DPGTTA+WE+ LD I  G++ L+ F+ +Q  
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  590  AVTALTAQ  597
             ++ L AQ
Sbjct  601  WISQLIAQ  608

136) HSM_1720 in NC_010519


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  548 bits (2069),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 324/655 (50%), Positives = 475/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGHLVEQYQPEDYDEAWKR  60
            M+LF+CEKPSQ++D++ +LGAT +GEG L  +  ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGS--GVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q+ VV +L+ KAT +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSHYALAVQLTTTSGETFVAGLAVP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  A+AV L + +G TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQTGLAkvvtvetkrekkSPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+ +G A VV+VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQFSDVPNVIRSLVASDSGLQTLLPKL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES F++VP V+ SL+ +D++L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLRQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLEMDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  VATLQSSGHTLVARGNVIVAQGWRILFGKNVDEETGNDDEK----QGLPVLTK---NQQC  473
            VA +  +G+ L A G+ +V  GWR +++    E+ + +++     Q LP L K      C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  NVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFllkkkkslvasaeavalIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDAFMQ  593
            GLI +G+L+KK +++ AS  A +LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  KQEAFVKQLIGSCMQQGMSLGNIEIRKCSECGKPMRKINHAKGTFWGCTGYPDCQ  648
            KQ A + QLI+     ++S+   +   C++CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

137) topB1 in NC_021082


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  548 bits (2069),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 324/655 (50%), Positives = 475/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGHLVEQYQPEDYDEAWKR  60
            M+LF+CEKPSQ++D++ +LGAT +GEG L  +  ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGS--GVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q+ VV +L+ KAT +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSHYALAVQLTTTSGETFVAGLAVP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  A+AV L + +G TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQTGLAkvvtvetkrekkSPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+ +G A VV+VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQFSDVPNVIRSLVASDSGLQTLLPKL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES F++VP V+ SL+ +D++L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLRQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLEMDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  VATLQSSGHTLVARGNVIVAQGWRILFGKNVDEETGNDDEK----QGLPVLTK---NQQC  473
            VA +  +G+ L A G+ +V  GWR +++    E+ + +++     Q LP L K      C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  NVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFllkkkkslvasaeavalIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDAFMQ  593
            GLI +G+L+KK +++ AS  A +LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  KQEAFVKQLIGSCMQQGMSLGNIEIRKCSECGKPMRKINHAKGTFWGCTGYPDCQ  648
            KQ A + QLI+     ++S+   +   C++CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

138) topB1 in NC_016808


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  548 bits (2069),  Expect = 3e-157, Method: Compositional matrix adjust.
 Identities = 324/655 (50%), Positives = 475/655 (73%), Gaps = 11/655 (1%)

Query  1    MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGHLVEQYQPEDYDEAWKR  60
            M+LF+CEKPSQ++D++ +LGAT +GEG L  +  ++ VTW +GHLVE   PE YDE  KR
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGS--GVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIATDADREGEMIARELLDLAG  120
            W+ E LPIIP +W++  K  +  Q+ VV +L+ KAT +VIATDADREGE+IARE+++L G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMGRSRSDWLIGMNFSRLFTLMA  180
            YRG I+R WLSAL+DASIR AL  L+++ ET ++Y ++++RSR+DWL+GMN+SRLFT+++
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  181  QAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSHYALAVQLTTTSGETFVAGLAVP  240
            +  GY G  LSVGRVQ+PTL LVV+RDREIA FV+ +  A+AV L + +G TF A    P
Sbjct  179  RQAGYDG-VLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQWVPP  236

Query  241  EQYLDESGLCLDSRVIQQAEAQIKQTGLAkvvtvetkrekkSPPLLYALSDLQGECNRLF  300
            +   D++G CL   V QQ+  QI+ +G A VV+VET R + +PPL + L+ LQ  C++ +
Sbjct  237  DACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  301  GFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPESQFSDVPNVIRSLVASDSGLQTLLPKL  360
            G++ Q+ L+IAQ+LYE HK TTYPR+D GYLPES F++VP V+ SL+ +D++L++++ +L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  361  NLRQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVYDLIRRRYLAQFLPHLEMDKT  420
            +  Q+SRAW+D K+TAHHGIIPT+  A LS +SE E+ VY LIR +YLAQFLPH E D+T
Sbjct  357  DRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRT  416

Query  421  VATLQSSGHTLVARGNVIVAQGWRILFGKNVDEETGNDDEK----QGLPVLTK---NQQC  473
            VA +  +G+ L A G+ +V  GWR +++    E+ + +++     Q LP L K      C
Sbjct  417  VAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLAC  476

Query  474  NVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQ  533
            +V++ ++++L+T PP  YT+G L+ +MK  A++V+DPRLKQ+L++T G+GTEATRA +I 
Sbjct  477  QVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIG  536

Query  534  GLIDKGFllkkkkslvasaeavalIDSLPDLLKNPGLTALWEQALNQIAEGSMTLDAFMQ  593
            GLI +G+L+KK +++ AS  A +LID++P  + +PG TA+WEQAL+ I  G +TLD F+ 
Sbjct  537  GLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIG  596

Query  594  KQEAFVKQLIGSCMQQGMSLGNIEIRKCSECGKPMRKINHAKGTFWGCTGYPDCQ  648
            KQ A + QLI+     ++S+   +   C++CG P R+ +   G FW+C+ YPDC+
Sbjct  597  KQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCK  651

139) B5T_02138 in NC_018691


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  547 bits (2064),  Expect = 8e-157, Method: Compositional matrix adjust.
 Identities = 319/654 (49%), Positives = 468/654 (72%), Gaps = 16/654 (2%)

Query  4    IYLCEKPSQGQDIARVLGATRKGNGCRSTQSEEVVVTWCFGHLLEMPPPEAYDPALKSWA  63
            ++LCEKPSQG+DI+R+LGAT++G+GC   ++  V VTWC+GHL+E +PPEAYD  LK W+
Sbjct  3    LFLCEKPSQGKDIGRILGATQRGEGC--LNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  64   LDTLPIIPEQWRLVVKPSAQRQFTVIKKWLGSASRLVIATDADREGEVIAREVMALCGYR  123
            ++ LPIIP++WR+ VKP +  QF V+K  L+ A++LVIATDADREGE+IARE++ LCGYR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  124  GPVQRLWLSALNDASIRKALSQLRDGKQTYPLYLAGMARARADWLVGMNLTRAYTVLGRN  183
            GP++RLWLSALNDASIR AL++LR + +T ++Y +++AR+RADWLVGMNL+R +TVLGR+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  184  AGYQGVLSVGRVQTPTLRLVVDRDRAIEAFKPSPYWTITSTLSAQGAAAPAFRAHWQPAA  243
            AGY+GVLSVGRVQTPTL+LVVDRDR I  F + PYW+I+ +L A G+   +F A+W P+ 
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGS---TFAAQWVPPD  237

Query  244  EHCDSQGRCINETVARTVAQQCSVTGAQAHVTDSKKERKAAPPPLPFDLNSLQQEAGKRF  303
               D  GRC+ + VA+   QQ   +G+ AHV     ER    PPLPFDL +LQ+  +K++
Sbjct  238  ACTDDAGRCLRQPVAQQTMQQIRAAGS-AHVVSVETERVREGPPLPFDLGTLQEVCSKQL  296

Query  304  DLSGNQVLEAAQALYETHKITSYPRTECRHLPTSMHGEAPDVLRAVLAMEPELTSIQSML  363
            +L  ++ LE AQALYETHK T+YPR++   LP SM +E P VL ++L  +P L SI + L
Sbjct  297  GLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQL  356

Query  364  DMSRRTKTWNDTEVEKASHHGIIPTAESADLTRLSTTERQVYGLIRRHYLIQFLPDHQYD  423
            D S+R+++WND  V  ++HHGIIPT E+A L+ +S  E  VY LIR HYL QFLP+H++D
Sbjct  357  DRSQRSRAWNDGKV--TAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFD  414

Query  424  ATTLTLSVQGHPFLAKGKATVEPGWTRLFPSSKS-TPqdgddqqdgsgdqgTVPALPEGT  482
             T   +S  G+ + A GK  V PGW ++++ +++   ++ +D    +    ++P L EG 
Sbjct  415  RTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGL  474

Query  483  SCAIQSVDCDRKMTTPPARYTDGTLIAAMKNIAKMVTDPKLRAVLRDTAGLGTGATRANI  542
            +C +  VD     T PP  YT+G L+ +MK +AK+V+DP+L+  L+DT G+GT ATRANI
Sbjct  475  ACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANI  534

Query  543  IATLKKRGFIEKKRGHLVSTEQGRQLIDALPSAITNPDTTAAWEQALEDIATGTGTLDEF  602
            I+ L  RG++ KK   + +++ +  LIDA+P+AI++P+TTA WEQAL+ I +G  TLD F
Sbjct  535  IGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVF  594

Query  603  MRRQLDWLNTVVTHAKGQTLSALAATVKDNALPCQCGGSATE-TAKS---WRCN  652
            + +Q  W++ ++++  +   ++L+  V + +   QCG+++ + ++KS   W C+
Sbjct  595  IGKQAAWISQLIAQYGS---ASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCS  645

140) XNC1_3450 in NC_014228


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  545 bits (2058),  Expect = 2e-156, Method: Compositional matrix adjust.
 Identities = 305/668 (46%), Positives = 478/668 (72%), Gaps = 10/668 (1%)

Query  1    MQLYLCEKPSQARDIARVLGVKQRGQGYLFGDSIIVTWAIGHLLEMAAPEHYGEQFGPPW  60
            M+L+LCEKPSQ++DI+R+LG  QRG+G L G ++ VTW IGHL+E A+PE Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RMEPLPVLPAQWQWTVKKETADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCHF  120
             +E LP++P +W+  VK  TA QF V++ LL +A +++IATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVRRLWLSALDETSIRQALAAILPGEKTAPLWQAGLGRARADWLTGINLTRLYTLKAQ  180
             GP+ RLWLSAL+++SIR AL+ + P+  T ++ +++L+R+RADWL G+NL+RL+T+ ++
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  AQGFGEVLSIGRVQTPTLALVVNRDNDIARFEPKPYWQVMATLQKDDISFRAKWLPAPDD  240
              G++ VLS+GRVQTPTL LVV+RD +IARF + PYW +  +L  ++ +F A+W+P+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  GDEEKRCIREDIAQSVVQRCQQTQDAVVTELTQKREKTPPPLCFDLGMLQQVASRQWGMG  300
             D+  RC+R+ +AQ  +Q+ + +  A V  +   R +  PPL FDLG LQ+V S+Q G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AGQVLTIAQSLYETHKATTYPRTDCGYLPVSMRENIPAVFTALTRTDPAMSAIISQLDAS  360
              + L IAQ+LYETHKATTYPR+D GYLP SM  ++P+V+ +L +TDP++ +I++QLD S
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  AFSRVWNDSQITAHPAIIPTRHTFDMTKLTADELKVYQLIRHYYLAQFLPAQETDVTDVT  420
              SR WND+++TAH +IIPT +   ++ ++  EL VY+LIR  YLAQFLP +E D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FTIGGQVFQAKGRVSVVTGWKALFADEKQAQEQEDNTA------LPALKK--EEIS-PVL  471
            F+ GGQ + A G+  V+ GW+ ++A+ +  + + +  +      LPAL K  E ++  V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  472  RAEIQPRQTRPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRESAGLGTEATRAGIIEalf  531
              ++++ +T PP P+T+G L+ +MK  A ++ DP+LK+ L+++ G+GTEATRA II +L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  532  krrllarkkknlhaTQLAQELIAGLPDVLTHPGMTALWEQSLDDIARGRTTLDGFMQKQA  591
             R  L +K + ++A++ A  LI ++P  +++PG TA+WEQ+LD I  G+ TLD F+ KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  592  QWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYPACKGMLNANAV  651
             W+++L+ +  + ++ + +P+ PACP+CG+P ++R+GK+ PFW+C+RYP CKG L  ++ 
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  652  IGSRKTRR  659
             + R + R
Sbjct  660  SSKRGASR  667

141) XNC1_3538 in NC_014228


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  540 bits (2038),  Expect = 9e-155, Method: Compositional matrix adjust.
 Identities = 309/668 (47%), Positives = 482/668 (73%), Gaps = 10/668 (1%)

Query  1    MPLYLCEKPSQARDIARVLGVKQRGQGYLFGGSITVTWAIGHLLEMAAPEHYGEQFGPPW  60
            M L+LCEKPSQ++DI+R+LG  QRG+G L G+++TVTW IGHL+E A+PE Y+EQ+   W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQL-KRW  59

Query  61   RMEPLPVLPAQWQWTVKKETADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRF  120
             +E LP++P +W+  VK  TA QF V++ LL +A +++IATDADREGE+IARE++E C +
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  TGPVRRLWLSALDETSIRQALAAILPGEQTESLWQAGLGRARADWLTGINLTRLYTLKAQ  180
             GP+ RLWLSAL+++SIR AL+ + P+ +T S+ +++L+R+RADWL G+NL+RL+T+ ++
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  EQGFGEVLSIGRVQTPTLALVVNRDNDIARFEQKPYWQVMATLQKDDISFRAKWLPAPDD  240
            + G++ VLS+GRVQTPTL LVV+RD +IARF   PYW +  +L  ++ +F A+W+P+   
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  GDEEKRCIREDIaqrvvqrcqqaqdavvTELTQKREKTPPPLCFDLGTLQQVASRQWGMG  300
             D+  RC+R+ +AQ+ +Q+ + A  A V  +   R +  PPL FDLGTLQ+V S+Q G++
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  301  AGQVLTIAQSLYETHKATTYPRTDCGYLPVSMRENIPAVFTALTRTDPAMSAIISQLDAS  360
              + L IAQ+LYETHKATTYPR+D GYLP SM  ++P+V+ +L +TDP++ +I++QLD S
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  361  AFSRVWNDSQITAHPAIIPTRHTFDMTKLTADELKVYQLIRHYYLAQFLPAQETDVTDVT  420
              SR WND+++TAH +IIPT +   ++ ++  EL VY+LIR  YLAQFLP +E D T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  421  FTIGGQVFQAKGRVSVVTGWKALFADEKQAQEQEDNTA------LPALKK--EEIS-PVL  471
            F+ GGQ + A G+  V+ GW+ ++A+ +  + + +  +      LPAL K  E ++  V 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  472  RAEIQPRQTRPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRESAGLGTEATRAGIIEalf  531
              ++++ +T PP P+T+G L+ +MK  A ++ DP+LK+ L+++ G+GTEATRA II +L+
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  532  krrllarkkknlhaTQLAQELIAGLPDVLTHPGMTALWEQSLDDIARGRTTLDGFMQKQA  591
             R  L +K + ++A++ A  LI ++P  +++PG TA+WEQ+LD I  G+ TLD F+ KQA
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  592  QWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYPACKGMLNANAV  651
             W+++L+ +  + ++ + +P+ PACP+CG+P ++R+GK+ PFW+C+RYP CKG L  ++ 
Sbjct  600  AWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPVESG  659

Query  652  IGSRKTRR  659
             + R + R
Sbjct  660  SSKRGASR  667

142) Mmc1_2541 in NC_008576


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  505 bits (1905),  Expect = 3e-144, Method: Compositional matrix adjust.
 Identities = 322/689 (47%), Positives = 471/689 (69%), Gaps = 43/689 (6%)

Query  1    MILYLCEKPSQGRDIGRVLGATSRHEGYVAGAGVCVTWCIGHLMEMVAPDGYRPEWKSWR  60
            M L+LCEKPSQG+DIGR+LGAT R EG + G+GV VTWCIGHL+E  +P++Y  + K W 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LDTLPIIPQQWQLELTARGRKQFKVIQGLLKGVTEVVLATDADREGETIGREVLERCQYR  120
            ++ LPIIPQ+W++E+ ++   QFKV+++LL   T++V+ATDADREGE I+RE++E C YR
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GKISRLWLSALDDASIRKALGNLLPGEQTEPLYQAGLGRSRADWMVGMNLTRAYTLLGRQ  180
            G I RLWLSAL+DASIR ALG+L P+ +T ++Y+++L+RSRADW+VGMNL+R +T+LGRQ
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  GGYAGVLSVGRVQTPTLKLVVDRDRLIENFKPVDYFEIFALHRVHSGTFIAKWVPPPKPC  240
            +GY GVLSVGRVQTPTLKLVVDRDR I  F +V Y  I       ++TF A+WVPP    
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  241  DAEGHCLDRTLAETVIHKVQGHSGT-ITKAETKRVKeppplplelSTLQQEASRRWGMGA  299
            D  G+CL + +A+  ++++++ +++ +   ET RV+E PPLP++L+TLQ+  S++ G++ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  300  KQTLEIAQSLYEKHKAVTYPRTDCRYLPSNQFKEAPAVLQGLTTNDASLTPLVEGADAQL  359
            ++TLEIAQ+LYE HKA TYPR+D  YLP + F E P+VL++L   D+SL +++   D   
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  360  RSKAWNDKkitahhaiiptaakiNIDALSREEALLYDLIRRHYLAQFYPPFEYDRTVIDT  419
            RS+AWND K+TAHH+IIPT    ++ A+S  E  +Y LIR HYLAQF P  E+DRTV   
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  420  QVAMETFHATGRVELIPGWKRVLAANQEKKEGDEDE--------QTLPVVRSGEAATIEG  471
              + + + ATG+  +IPGW++VLA  Q    ++E++         +LP +  G A  + +
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  472  AELKQKQTKPPNRYTEGTLIQAMKSVGKLVEDARLRKILRETSGIGTEATRAAILETLIK  531
             +LK  +T PP+ YT+G L+++MK+V+KLV D+RL++ L++T GIGTEATRA I+  LI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  532  RNLLAKQGKKSLVSMPAGRLLVDALPHSVTDPATTAVWEQTLDDIAHGGGSLETFLAKSE  591
            R  L K+G +++ +  A+  L+DA+P +++DP+TTAVWEQ+LD I  G  +L+ F++K  
Sbjct  541  RGYLVKKG-RAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  592  LWLNKLIHNVHQRQQLGLNPFRGLPPSTSHTDPAQPTPRRQRRSKAEVTPTPNAAPLCPQ  651
             W+++LI             +                      + A ++     +P CPQ
Sbjct  600  AWISQLI-----------AQY----------------------GSASLSIKVPQGPACPQ  626

Query  652  CGGPMLQRKSPQGAFWSCAEQATCTGTRP  680
            CG+P  QR +  G+FWSC+  + C GT P
Sbjct  627  CGAPTRQRSGKSGPFWSCSRYPDCKGTLP  655


 Score = 39.0 bits (128),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 32/48 (67%), Gaps = 6/48 (12%)

Query  697  RGPLCPKCQQAPLVQRTAYRGKNSGQPFWGCQRYPQCRYTQASQTTES  744
            +GP CP+C  AP  QR+   GK++  PFW+C RYP+C+ T + ++  S
Sbjct  620  QGPACPQCG-APTRQRS---GKSG--PFWSCSRYPDCKGTLPVESGSS  661

143) Hneap_1612 in NC_013422


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  505 bits (1903),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 292/608 (49%), Positives = 443/608 (73%), Gaps = 9/608 (1%)

Query  1    MRVYLCEKPSQARDIAAVLGIQSKDKSSITTADGVVTWAFGHLLEQAPPDAYDDSLKRWA  60
            MR++LCEKPSQ++DI+ +LG   ++ + +  ++  VTW +GHL+E APP+AYD+ LKRW+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  61   LASLPIAPTQWKVEVKSSAKDQFKAIATLLKRATEVVIATDADREGEMIARELMAFVGFK  120
            +  LPI P +W+VEVK+ +  QFK + +LL +AT++VIATDADREGE+IARE++ + G++
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  121  GKVQRLWlsaldaasvkkalaalkpsaETAGLYQSALGRSRADWLVGMNLTRAFTLAGCS  180
            G ++RLWLSAL+ AS++ AL+ L+PSAET ++Y+SAL+RSRADWLVGMNL+R FT+ G  
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  181  QGGEGVRSVGRVQTPTLSLVVARDRQIEHFKPVPYFEL-FGFFEAGQSFSTKWKVPEGAG  239
             G +GV SVGRVQTPTL LVV RDR+I +F +VPY  +  ++F +G +F+++W  P++  
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  240  DDAGRCVDQSIVDAVASKI-TGKTGTVSQYETKRISENPPLPFSLSTLQKTCSAKFGLGA  298
            DDAGRC+ Q++ +    +I ++ ++ V   ET R+ E PPLPF L+TLQ  CS ++GL+ 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  299  QEVLDIAQALYETHKATTYPRSDCNFLPEEQFQEASSIVTALAKSDTEVQGIVDLLDFSR  358
            QE L+IAQALYETHKATTYPRSD  +LPE  F E ++++ +L K+D  +++I++ LD S+
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  359  KSPAWNTKKITAHHAIIPTQTPPNMDAMSDNERRVYELIRRQYLAQFLPNYEYDRTQIGI  418
            +S AWN  K+TAHH+IIPT  P+++ AMS++E  VY LIR +YLAQFLP+ E+DRT   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  419  SIEGELFQTTGKIDQVTGWRVLFGKADASDDEPDDE-------VQTLPALTQGQTLPLSH  471
            S  G+ + +TGK   + GWR +++ ++A D++ +++       + +LP L +G +  +++
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  472  TEIAAKQTKPPSRYTEGTLIDAMQTIGKNITDPRLKAILKENSGIGTEATRAGIIANLIE  531
             ++ A +T PP  YT+G L+ +M+ ++K ++DPRLK  LK+  GIGTEATRA II+ LI 
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  532  RGFITKKGKQVISSDVGRQLIDALPDSVKSPALTALWEQSLEEIAEGKRELAGFEADVVK  591
            RG++ KKG+ + +SD +  LIDA+P ++  P+ TA+WEQ+L+ I  G+  L  F +    
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  592  FITAIIDQ  599
             I+ +I Q
Sbjct  601  WISQLIAQ  608

144) KP1_0634 in NC_012731


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  497 bits (1876),  Expect = 5e-142, Method: Compositional matrix adjust.
 Identities = 285/562 (51%), Positives = 411/562 (74%), Gaps = 11/562 (1%)

Query  2    AAPEDYDPALKHWRAEHLPFIPPAWRLVIRPEVRKQFRIIEKLLKQADAVVIATDADREG  61
            A+PE YD  LK+W  E+LP+IP  WR+ ++P    QF+++  LL +A  +VIATDADREG
Sbjct  47   APPEAYDEQLKRWSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREG  106

Query  62   ETIAREILEQCRWRGPVQRLWLSALDDASIHKALAAMRSGDSTYPLYQAGLARARADWLV  121
            E IAREI+E C  RGP++RLWLSAL+DASI+ AL+ +R++  T ++Y+++LAR+RADWLV
Sbjct  107  ELIAREIVELCGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLV  166

Query  122  GINMTRACTLMNRR--HKGVLSVGRVQTPTLRLVVERDREISRFTPRPWWRVDARLHAEG  179
            G+N++R  T++ R+    GVLSVGRVQTPTL+LVV+RDREI+RF + P W +   L A G
Sbjct  167  GMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGG  226

Query  180  TTFLAQWQPDGVYCDDEGRCIRESAAREATASLQQAGTTLVLDVTTRREKTPPPLAFTLS  239
            +TF AQW P +   DD GRC+R++ A+++   ++ AG++ V+ V T R +  PPL+F L+
Sbjct  227  STFAAQWVPPDACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLG  286

Query  240  ALQQVCSKQWGMGAQEVLDIAQRLYETHKATTYPRTDCGWLPLSMHTEAPQVLAALVASD  299
            +LQ+VCSKQ G++ QE L+IAQ LYETHKATTYPR+D G LP SM +E P VL +L+ +D
Sbjct  287  TLQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTD  346

Query  300  ISLQPLATQLNLQQHSRLWDDSKITAHHGIIPTRKTVDLTQMNDSERKVYGLVRSHFLAQ  359
             SL+++  QL+  Q+SR W+D+K+TAHHGIIPT     L+ M++ E  VY L+RSH+LAQ
Sbjct  347  PSLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQ  406

Query  360  FLSDHEVDKTDLRLNCAGETLAARGSVVIVSGWQQLFLREMATHSPEETQS---------  410
            FL++HE D+T  +++C+G+ LAA G  V+++GW+Q++    A ++  E ++         
Sbjct  407  FLPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPA  466

Query  411  LPVLQQGQTCQVEQVDVRARQTQPPEHYTEGTLIAAMKNAARFVSDERLKQRLKENAGIG  470
            LP L +G +CQV +VD++A +T PP  YT+G L+ +MK  A++VSD RLKQ+LK+  GIG
Sbjct  467  LPKLYEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIG  526

Query  471  TEATRAGIIQTLLKRGYLIKQRRFLLATDTASALIDALPEKLKDPGTTALWEQMLDDIAT  530
            TEATRA II  L+ RGYL+K+ R + A+D+A +LIDA+P  + DPGTTA+WEQ LD I +
Sbjct  527  TEATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEA  586

Query  531  GKMGLEAFLVQQQETVTALTAQ  552
            G++ L+ F+ +Q   ++ L AQ
Sbjct  587  GQLTLDVFIGKQAAWISQLIAQ  608

145) XNC1_p0010 in NC_014170


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  493 bits (1860),  Expect = 1e-140, Method: Compositional matrix adjust.
 Identities = 280/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFIHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G ++++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPDAWRYNVRKSALKQYKIVEGLVKKASTIYISTDFDREGEAIARSLLDQFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKETVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + ET+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCINKAYAEQVSSQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDSKVTAHHAIIPTPARTDISAMSEIELNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE EL +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFAASGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +AA+GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GTELMNKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGTV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVATGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVDQLKVAAPVLTKEGSAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

146) ST548_p1085 in NC_020180


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  492 bits (1856),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 279/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFLHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G L+++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPESWRYNVRKSAFKQYKIVEGLVKKASTIYISTDYDREGEAIARSLLDRFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKDTVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + +T+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCVNKAYAEQVASQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDAKVTAHHAIIPTPARTDISAMSEIEFNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE E+ +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFAASGKTPAKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +AA+GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GAELANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVASGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVEQLKVAAPVLTKEGGAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

147) XNC1_2387 in NC_014228


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  492 bits (1857),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 280/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFIHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G ++++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPDAWRYNVRKSALKQYKIVEGLVKKASTIYISTDFDREGEAIARSLLDQFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKETVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + ET+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCINKAYAEQVSSQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKENIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDSKVTAHHAIIPTPARTDISAMSEIELNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE EL +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFAASGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +AA+GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GTELMNKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGTV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVATGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVDQLKVAAPVLTKEGSAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

148) topB in NC_017645


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  492 bits (1855),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 278/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFLHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G L+++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPESWRYNVRKSAFKQYKIVEGLVKKASTIYISTDYDREGEAIARSLLDRFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKDTVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + +T+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCVNKAYAEQVASQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDAKVTAHHAIIPTPARTDISAMSEIEFNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE E+ +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFASAGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +A++GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GAELANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVASGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVEQLKVAAPVLTKEGGAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

149) topB in NC_009140


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  492 bits (1855),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 278/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFLHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G L+++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPESWRYNVRKSAFKQYKIVEGLVKKASTIYISTDYDREGEAIARSLLDRFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKDTVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + +T+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCVNKAYAEQVASQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDAKVTAHHAIIPTPARTDISAMSEIEFNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE E+ +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFASAGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +A++GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GAELANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVASGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVEQLKVAAPVLTKEGGAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

150) CFSAN001921_24100 in NC_021815


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  492 bits (1855),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 278/677 (42%), Positives = 453/677 (67%), Gaps = 16/677 (2%)

Query  1    MDLYICEKPSQAKDLAGVMKASQRGDGFLHDGGNRVITWAFGHLLELYMPDDYDERYKSW  60
            M L++CEKPSQ+KD++ ++ A+QRG+G L+++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLETLPIAPESWRYNVRKSAFKQYKIVEGLVKKASTIYISTDYDREGEAIARSLLDRFRY  120
            S+E LPI P+ WR +V+  +  Q+K+V +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPIRRVCLTALDESSIKKALNNVKDGKDTVSLYYAALARQRADWLVGMNVSRLYTVLAR  180
             GPI R+ L+AL+++SI+ AL +++ + +T+S+Y +ALAR RADWLVGMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  DVGFNHTLHVGRVITPTVALVCQRDREIAGFTPSPYWTLGVNVSVQNGQFAAQWIPPEEC  240
            + G++  L VGRV TPT+ LV +RDREIA F + PYW+++V++    + FAAQW+PP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDEQGRCVNKAYAEQVASQVNGANAV-ISKAETKPGKESAPLPFDLTSLQQYASKRWGYT  299
            +D+ GRC+ ++ A+Q   Q+ +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQALYETHKATTYPRTDSRYLPESQKEDIPDILQALILSDQNVSGLVAGADPH  359
             Q+ L+ AQALYETHKATTYPR+DS YLPES   ++P +L++L+ +D ++ ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDAKVTAHHAIIPTPARTDISAMSEIEFNLYDAIRRFYIAQFYSEFEFTKTSIE  419
            +++R  ND+KVTAHH+IIPT   + +SAMSE E+ +Y  IR  Y+AQF ++ EF +T   
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQCGRHLFASAGKTPTKQGWKVLFASDSESSPKDEGEDTDAPVEQEKLPRVSQGEPALLN  479
              CG + +A++GK     GW+ ++A        +EG+ +  +     LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GAELANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAV  539
            + +L    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLLATDKAHALIAVLPPAIKSPGMTAAWEQELEKVASGSGNMSVFMKQIS  599
             +GY+ ++ + + A+D A +LI  +P+AI  PG TA WEQ L+ + +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  TWICQMVEQLKVAAPVLTKEGGAMAKAFEGAKPPSHECFNCGGEMHRIKGKNGFFWGCQN  659
            +WI Q++ Q   A             ++    P +  C +CG+  ++  GK+G FW+C  
Sbjct  600  AWISQLIAQYGSA-------------SLSIKVPQGPACPQCGAPTRQRSGKSGPFWSCSR  646

Query  660  -EACKKTFPDNRGKPEK  675
               CK T+P + G + +
Sbjct  647  YPDCKGTLPVESGSSKR  663


 Score = 52.1 bits (178),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 23/57 (41%), Positives = 33/57 (58%), Gaps = 6/57 (10%)

Query  671  GKPEKRIAAEDCPDCPDCGSPMRLRKGKAPGKKRASKFWGCTAYPDCKGTMPFKKSD  727
            G +   I   + P CP+CG+P R R GK+      + FW+C+ YPDCKGT+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

151) Sbal117_4706 in NC_017580


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  486 bits (1831),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 305/663 (47%), Positives = 453/663 (69%), Gaps = 18/663 (2%)

Query  1    MRLFLCEKPSQAKDIASVLGC-KRGDGVFTGDGIAVTFCVGHVLQQAEPENYNPDFETWN  59
            MRLFLCEKPSQ+KDI+ +LG  +RG+G + G G++VT C+GH+++ A PE Y+ ++  W+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   IVDLPIIPTVWKMLVSPKTKAQFAIVKKQLAKATEVIIATDADREGEVIAREVLEYVNYK  119
            + +LPIIP  W++ V PKT +QF +VK  LAKAT+++IATDADREGE+IARE++E   Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPIQRLWLSALDDASIKKALASLRPNHETAKLYDAGLGRSRGDWLIGMNMTRLCTLLSRE  179
            GPI+RLWLSAL+DASI+ AL+ LRP+ ET  +Y+++L+RSR+DWL+GMN++RL T+L+R+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  YGYQGAFSVGRVQTPTLRLVVDRDRQVEQFEPQSYYDIT-GLFNATIPFKAKWQVPDNLG  238
             GY+G +SVGRVQTPTL+LVVDRDR++ +F + +Y  I+ +LF +   F A+W  PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  239  DEQGRCLQVTTVDHVLSQCRDQPGT-VTQFDTKRQKSKHPPLFFLGSLQKAMSAKFGYGA  297
            D+ GRCL+    ++ + Q R   ++ V   +T R +   P  F LG+LQ   S ++G + 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  298  KEVLDIAQSLYEKYKVTTYPRTDCPYLPLSQKKEVGSILDK-LKVVPTFAAWCSVADVNE  356
            +E L+IAQ+LYE  K TTYPR+D  YLP S   EV ++LD  LK  P++ +  +  D ++
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  357  TSACWNDKKITAHHGIIPLPVTPKLHEMNEKELNLYHAIVQRYLAQFYPVAEDDATTIEL  416
             S  WND K+TAHHGIIP    +KL  M+EKEL +Y+ I  +YLAQF P  E D T   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  417  MVGSQSFKATGKVERVKGWRLVTGK------DSEDETADDSSNLPLLS-IGQTLT---AQ  466
              G+Q++ ATGK   + GWR V +       D+E++TA  +  LP L+ + + L+   A+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  467  FQREDKRTKPPGRFTEGTLIDAMSNIAKFESDPKLKSILKETSGIGTEATRANIIDTLKA  526
             +    +T PP  +T+G L+ +M  +AK+ SDP+LK  LK+T GIGTEATRANII+ L A
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  527  RGFVTVTGKQLISSEAGRSLIDALPDVLTRPAMTALWEQALDEIALGNGSLDDFMARQST  586
            RG++   G+ + +S+A+ +LIDA+P  ++ P+ TA+WEQALD I  G+ +LD F+++Q++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  587  FITQLVSMFKQGQYTLKLPKVLAVTLPCPVCQKSMKQLSGKSGKFWVCEDKEQCGLLLND  646
             I+QL++ +  +  ++K+P+      +CP C  + +Q SGKSG FW C    +C   L  
Sbjct  601  WISQLIAQYGSASLSIKVPQ----GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  647  ERG  649
            E G
Sbjct  657  ESG  659

152) Sbal117_4782 in NC_017578


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  484 bits (1825),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 302/663 (46%), Positives = 452/663 (69%), Gaps = 18/663 (2%)

Query  1    MRLFLCEKPSQAKDIASVLGC-KRGDGVFTGDGIAVTFCVGHVLQQAEPENYNPDFETWN  59
            MRLFLCEKPSQ+KDI+ +LG  +RG+G + G G++VT C+GH+++ A PE Y+ ++  W+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   IVDLPIIPTAWKMLVSPKTKAQFAIVKKQLAKATEVIIATDADREGEVIAREVLEYVNYK  119
            + +LPIIP  W++ V PKT +QF +VK  LAKAT+++IATDADREGE+IARE++E   Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPIQRLWLSALDDASIKKALASLRPNHETAKLYDAGLGRSRGDWLIGMNMTRLCTLLSRE  179
            GPI+RLWLSAL+DASI+ AL+ LRP+ ET  +Y+++L+RSR+DWL+GMN++RL T+L+R+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  YGYQGAFSVGRVQTPTLRLVVDRDSQVEQFEPQSYYDIT-GLFNATIPFKAKWQVPDNLG  238
             GY+G +SVGRVQTPTL+LVVDRD ++ +F + +Y  I+ +LF +   F A+W  PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  239  DEQGRCLQVTTVDHVLSQCRDQPGT-VTQFDTKRQKSKHPPLFFLGSLQKAMSAKFGYGA  297
            D+ GRCL+    ++ + Q R   ++ V   +T R +   P  F LG+LQ   S ++G + 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  298  KEVLDIAQSLYEKYKVTTYPRTDCPYLPLSQKEEVGSILDK-LKVVPAFAAWCSAADVNE  356
            +E L+IAQ+LYE  K TTYPR+D  YLP S   EV ++LD  LK  P++ +  +  D ++
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  357  TSACWNDKKITAHHGIIPLPVTPKLHEMNEKELNLYHAIVQRYLAQFYPVAEDDATTIEL  416
             S  WND K+TAHHGIIP    +KL  M+EKEL +Y+ I  +YLAQF P  E D T   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  417  MVGSQSVKATGKVERVKGWRLVTGK------DSEDETTDDSANLPLLS-IGQTLT---AQ  466
              G+Q++ ATGK   + GWR V +       D+E++T+  +  LP L+ + + L+   A+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  467  FQREDKRTKPPGRFTEGTLIDAMSNIAKFESDPKLKSILKETSGIGTEATRANIIDTLKA  526
             +    +T PP  +T+G L+ +M  +AK+ SDP+LK  LK+T GIGTEATRANII+ L A
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  527  RGFVTVTGKQLISSEAGRSLIDALPDVLTRPAMTALWEQALDEIALGNGSLDDFMARQST  586
            RG++   G+ + +S+A+ +LIDA+P  ++ P+ TA+WEQALD I  G+ +LD F+++Q++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  587  FITQLVSMFKQGQYTLKLPKVLAVTLPCPVCQKSMKQLSGKNGKFWVCEDKEQCGLLLND  646
             I+QL++ +  +  ++K+P+      +CP C  + +Q SGK+G FW C    +C   L  
Sbjct  601  WISQLIAQYGSASLSIKVPQ----GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  647  ERG  649
            E G
Sbjct  657  ESG  659

153) ASA_P4G171 in NC_009349


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  484 bits (1824),  Expect = 7e-138, Method: Compositional matrix adjust.
 Identities = 279/678 (42%), Positives = 452/678 (67%), Gaps = 17/678 (2%)

Query  1    MDLYICEKPSQAKDLAGVLKLTQRGDGFIHDGGKRVITWAFGHLLEMYMPDDYDEKYKSW  60
            M L++CEKPSQ+KD++ +L  TQRG+G ++++G   +TW +GHL+E   P+ YDE+ K W
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGV-TVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   SLDSLPIAPESWQSKVRQKSAKQYKIIEGLVKKASTVYISTDYDREGEAIARSLLDRFRY  120
            S++ LPI P+ W+  V+ K+A Q+K++ +L+ KA+ + I+TD DREGE IAR +++   Y
Sbjct  60   SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGY  119

Query  121  SGPVRRVCLTALDESSIRKALSNIKDGQDTVPLYYAALGRQRADWLIGMNVSRLYTVLAR  180
             GP+ R+ L+AL+++SIR AL++++ + +T+++Y +AL+R RADWL+GMN+SRL+TVL+R
Sbjct  120  RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGR  179

Query  181  QVGFESTLHVGRVITPTVALVCQRDRDIAGFTPSPYWVLGVNVAVQNGQFLAQWVPPEEC  240
            Q G+++ L VGRV TPT+ LV +RDR+IA F + PYW ++V++    + F AQWVPP+ C
Sbjct  180  QAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDAC  239

Query  241  SDDQGRCTNKAYAEQVASQINGAQAV-ISKAETKPGKESAPLPFDLTALQQYGSKRWGYT  299
            +DD GRC  ++ A+Q   QI +A +  +   ET   +E++PLPFDL +LQ+  SK+ G  
Sbjct  240  TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLD  299

Query  300  AQQVLDAAQSLYETHKATTYPRTDSRYLPESQKENISDILQALILSDQRVSGLVAGADPH  359
             Q+ L+ AQ+LYETHKATTYPR+DS YLPES   +++ +L++L+ +D  + ++++  D  
Sbjct  300  VQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRS  359

Query  360  RKARVFNDSKVSAHHAIIPTPARTNISAMSEIELNLYDAIRRFYIAQFYSEFEFSKTVIE  419
            +++R  ND+KV+AHH+IIPT   +++SAMSE EL +Y  IR  Y+AQF ++ EF +TV  
Sbjct  360  QRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAK  419

Query  420  VQSGRHLFAASGKTPTKQGWKVLFTSDSESDPKEEGEDVDALIEQEKLPRVSQGEPALLK  479
               G + +AA+GK     GW+ +++     D   EG+          LP++ +G +  + 
Sbjct  420  FSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVA  479

Query  480  GADLANKMTRPAPHFTEATLLAAMENIARFVTEEKFKQILKDTAGLGTPATRASIIQGAV  539
            + DL    T P+  +T++ L+ +M  +A++V++ ++KQ LKDT G+GT ATRA+II G +
Sbjct  480  DVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLI  539

Query  540  DKGYFKRQKKVLIATEKAHALIAVLPPAIKSPGMTAAWEQELEKIATGAGNMSVFMKQIS  599
             +GY+ ++ + + A++ A +LI  +P+AI  PG TA WEQ L+ I +G   + VF+ + +
Sbjct  540  ARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQA  599

Query  600  SWICQMVEQLKTAAPALTQDGGAMVKAFAGAKPQLHVCFNCGGETLIRIKGKNGFFWGCK  659
            +WI Q++ Q  +A+ ++               PQ   C +CG+ T  R  GK+G FW+C 
Sbjct  600  AWISQLIAQYGSASLSIKV-------------PQGPACPQCGAPTRQR-SGKSGPFWSCS  645

Query  660  N-EACKKTFPDNRGKPEK  676
                CK T+P + G + +
Sbjct  646  RYPDCKGTLPVESGSSKR  663


 Score = 49.0 bits (166),  Expect = 8e-07, Method: Compositional matrix adjust.
 Identities = 22/57 (39%), Positives = 32/57 (57%), Gaps = 6/57 (10%)

Query  672  GKPEKRIATEDCPACPDCASPMRLRKGKAPGKVRATKFWGCTGYPDCKTTMPFKKSD  728
            G +   I   + PACP+C++P R R GK+        FW+C+ YPDCK T+P   + 
Sbjct  610  GSASLSIKVPQGPACPQCGAPTRQRSGKS------GPFWSCSRYPDCKGTLPVESGS  660

154) Sbal_4425 in NC_009036


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  484 bits (1823),  Expect = 9e-138, Method: Compositional matrix adjust.
 Identities = 302/663 (46%), Positives = 452/663 (69%), Gaps = 18/663 (2%)

Query  1    MRLFLCEKPSQAKDIASVLGC-KRGDGVFTGDGIAVTFCVGHVLQQAEPENYNPDFETWN  59
            MRLFLCEKPSQ+KDI+ +LG  +RG+G + G G++VT C+GH+++ A PE Y+ ++  W+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWS  60

Query  60   IVDLPIIPTVWKMLVSPKTKAQFAIVKKQLAKATEVIIATDADREGEVIAREVLEYVNYK  119
            + +LPIIP  W++ V PKT +QF +VK  LAKAT+++IATDADREGE+IARE++E   Y+
Sbjct  61   VEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYR  120

Query  120  GPIQRLWLSALDDASIKKALASLRPNHETAKLYDAGLGRSRGDWLIGMNMTRLCTLLSRE  179
            GPI+RLWLSAL+DASI+ AL+ LRP+ ET  +Y+++L+RSR+DWL+GMN++RL T+L+R+
Sbjct  121  GPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLGRQ  180

Query  180  YGYQGAFSVGRVQTPTLRLVVDRDSQVEQFEPQSYYDIT-GLFNATIPFKAKWQVPDNLG  238
             GY+G +SVGRVQTPTL+LVVDRD ++ +F + +Y  I+ +LF +   F A+W  PD   
Sbjct  181  AGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT  240

Query  239  DEQGRCLQVTTVDHVLSQCRDQPGT-VTQFDTKRQKSKHPPLFFLGSLQKAMSAKFGYGA  297
            D+ GRCL+    ++ + Q R   ++ V   +T R +   P  F LG+LQ   S ++G + 
Sbjct  241  DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDV  300

Query  298  KEVLDIAQSLYEKYKVTTYPRTDCPYLPLSQKEEVGSILDK-LKVVPAFAAWCSAADVNE  356
            +E L+IAQ+LYE  K TTYPR+D  YLP S   EV ++LD  LK  P++ +  +  D ++
Sbjct  301  QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQ  360

Query  357  TSACWNDKKITAHHGIIPLPVTPKLHEMNEKELNLYHAIVQRYLAQFYPVAEDDATTIEL  416
             S  WND K+TAHHGIIP    +KL  M+EKEL +Y+ I  +YLAQF P  E D T   +
Sbjct  361  RSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHEFDRTVAKF  420

Query  417  MVGSQSVKATGKVERVKGWRLVTGK------DSEDETTDDSANLPLLS-IGQTLT---AQ  466
              G+Q++ ATGK   + GWR V +       D+E++T+  +  LP L+ + + L+   A+
Sbjct  421  SCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD  480

Query  467  FQREDKRTKPPGRFTEGTLIDAMSNIAKFESDPKLKSILKETSGIGTEATRANIIDTLKA  526
             +    +T PP  +T+G L+ +M  +AK+ SDP+LK  LK+T GIGTEATRANII+ L A
Sbjct  481  VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIA  540

Query  527  RGFVTVTGKQLISSEAGRSLIDALPDVLTRPAMTALWEQALDEIALGNGSLDDFMARQST  586
            RG++   G+ + +S+A+ +LIDA+P  ++ P+ TA+WEQALD I  G+ +LD F+++Q++
Sbjct  541  RGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAA  600

Query  587  FITQLVSMFKQGQYTLKLPKVLAVTLPCPVCQKSMKQLSGKNGKFWVCEDKEQCGLLLND  646
             I+QL++ +  +  ++K+P+      +CP C  + +Q SGK+G FW C    +C   L  
Sbjct  601  WISQLIAQYGSASLSIKVPQ----GPACPQCGAPTRQRSGKSGPFWSCSRYPDCKGTLPV  656

Query  647  ERG  649
            E G
Sbjct  657  ESG  659

155) NGK_1038 in NC_011035


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  436 bits (1641),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 278/683 (41%), Positives = 434/683 (64%), Gaps = 42/683 (6%)

Query  1    MRLFLCEKPSQAKDIGKVLGVLGGRHDGYFQNGDTIVTWAFGHILTQAAPDAYGEQYADF  60
            MRLFLCEKPSQ+KDIG++LG    R +G ++ ++  VTW +GH++  A+P+AY+EQ    
Sbjct  1    MRLFLCEKPSQGKDIGRILGA-TQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRW  59

Query  61   GNISALPILPEVWQMQVPPKVSKQFKVIKSLLAKADEVVIATDADREGEVIAREILDYCG  120
             ++  LPI+P+ W+++V PK + QFKV+K+LLAKA ++VIATDADREGE+IAREI++ CG
Sbjct  60   -SVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YRKKISRFWTSGLDTQSVKKALSSIMPGKDKENLYQAGLARGRADWLVGMNLSRAYTA-A  179
            YR  I R+W S+L+  S++ AL+ + P+ +  ++Y+++LAR+RADWLVGMNLSR +T  +
Sbjct  119  YRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTVLG  178

Query  180  YSAGYGREHILSIGRIQTPTLKLVVQRDKEIDTFVPYNYYTLSVDFETADKSVFTTLWQV  239
              AGY  + +LS+GR+QTPTLKLVV+RD+EI  FV+  Y +++V +  A+ S F++ W  
Sbjct  179  RQAGY--DGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQWVP  235

Query  240  PENWRNTDGYCTNLEAVKALVKQL-EKSTGKVITSNKERKSTPPPLPYSLSALQKEAGKK  298
            P+   +  G C      +  ++Q+   +++ V++ + ER    PPLP+ L++LQ   +K+
Sbjct  236  PDACTDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQ  295

Query  299  LGLSASKVLKIAQTLYEKYKITSYPRTPCRYLPKSQMSEVKDVFAAIQTIDKSMLSVIEK  358
            LGL     L IAQ+LYE  K T+YPR+   YLP S  +EV  V+ ++   D S+ S++ +
Sbjct  296  LGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQ  355

Query  359  ADPERQSRVWNDNQVNKHSHHAIIPTKASNFDLSVLDKNELTVYRMIRDRYIAQFYPDFE  418
             D  ++SR WND +V   +HH+IIPT  +   LS +  +EL+VYR+IR +Y+AQF P+ E
Sbjct  356  LDRSQRSRAWNDGKVT--AHHGIIPTLEPA-KLSAMSEKELAVYRLIRSHYLAQFLPHHE  412

Query  419  YDSTVVEVEACSHLFKASSQSPVISGWKVLLGKDVFEGDQIDEG--------PALPHLKV  470
            +D TV      ++ + A+++  VI+GW+ +L+    E+++ + +        PALP L  
Sbjct  413  FDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYE  472

Query  471  NDEVDTLSFNPETKKTTPPPRFTEASLLDEMQTLKDFLKNVEDEQIRKILKSTEGLGTEA  530
                +    +  + KT PP  +T++ L+  M   K+  K V D ++++ LK T G+GTEA
Sbjct  473  GLACQVADVDLKALKTLPPKPYTQGELVKSM---KGVAKLVSDPRLKQKLKDTVGIGTEA  529

Query  531  TRATIIDRLFEMGYMEKKRSKIYATEKGRNLIARIPTMIADPITTAKWELALAGIEAGKL  590
            TRA II+ L+  GY+ KK   I A++ +  LI  +P+ IADP TTA WE AL  IEAG+L
Sbjct  530  TRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQL  589

Query  591  TLAEFMAYQQKVITELVGQAKKDAVGKARPPKQTDSAGTKKQAVARNEDDVCPTCKEGRL  650
            TL  F++ Q   I++L++Q                  G+   ++   ++  CP C  +  
Sbjct  590  TLDVFIGKQAAWISQLIAQ-----------------YGSASLSIKVPQGPACPQC-GAPT  631

Query  651  RQRGFKENPDKRYWGCSRFPECK  673
            RQR+ K  P   +W+CSR+P+CK
Sbjct  632  RQRSGKSGP---FWSCSRYPDCK  651

156) topB in NC_017390


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  401 bits (1510),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 249/618 (41%), Positives = 411/618 (67%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADVLPKPHRRGDGYIACGSDQVVTWCVGHLLEQAQPDSYNSRFAR  60
            MRLF+ EKPS ++ I+ +L   +R G+G +  GS+  VTWC+GHL+E A P++Y+ ++ R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLDDLPIVPEKWRLQPRPSVAKQLNVIKGLLAQASVVVHAGDPDREGQLLVDEVLDYLT  120
            WS+++LPI+P+ WR++ +P  A Q++V+K+LLA+A+ +V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRAQVQRCLINDLNPQAVERAIGRLRENREFIPLCVSALARARADWLYGINMTRAY  180
                 R+ ++R  ++ LN  ++  A+G+LR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVRAHIVTPADERFVALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSASCEPYQDEEGRLLHRPLAEHVVARI-GGHPAHVTSYNDKRENETAPLPFSLSALQI  299
             P+ +C    D+ GR L++P+A++ + +I ++ +AHV S +  R  E +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAGKRFGLSAQTVLDTCQRLYETHKLITYPRSDSRYLPDEHFAGRHAVLNAINVHQPNLS  359
              +K++GL  Q  L+  Q LYETHK  TYPRSDS YLP+  FA   +VL+++   +P+L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-GDFNSDQKNRCWDDKKVDAHHAIIPTARSSQVS-LSDNEQQIYRLIATQYLMQFCPD  417
            +  G+++  Q++R W+D KV AHH+IIPT  ++++S +S++E  +YRLI ++YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVYRKCVIELDIAGGKFVAKARFLAEAGWRALLGSKERDE-ENDGTP------LPVVTKG  470
              + + V  +  +G ++ A ++ +  +GWR +L+  + ++ + +G        LP + K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVQEK--QTQPPRPFTDATLLSAMTGIARFVQDKDLKKVLRATDGLGTEAT  527
             + L C+ ++V+ K  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHSSPAGRALIHSLPEMAARPDMTAHWESTLTKISEKQCR  587
            RA II  L+ R +L KKGR I++S A+ +LI+++P   A P+ TA WE +L  I   Q  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMSPLVDTLHSLIQQ  605
             + F++     +  LI Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

157) topB in NC_012214


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  401 bits (1510),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 249/618 (41%), Positives = 411/618 (67%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADVLPKPHRRGDGYIACGSDQVVTWCVGHLLEQAQPDSYNSRFAR  60
            MRLF+ EKPS ++ I+ +L   +R G+G +  GS+  VTWC+GHL+E A P++Y+ ++ R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLDDLPIVPEKWRLQPRPSVAKQLNVIKGLLAQASVVVHAGDPDREGQLLVDEVLDYLT  120
            WS+++LPI+P+ WR++ +P  A Q++V+K+LLA+A+ +V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRAQVQRCLINDLNPQAVERAIGRLRENREFIPLCVSALARARADWLYGINMTRAY  180
                 R+ ++R  ++ LN  ++  A+G+LR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVRAHIVTPADERFVALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSASCEPYQDEEGRLLHRPLAEHVVARI-GGHPAHVTSYNDKRENETAPLPFSLSALQI  299
             P+ +C    D+ GR L++P+A++ + +I ++ +AHV S +  R  E +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAGKRFGLSAQTVLDTCQRLYETHKLITYPRSDSRYLPDEHFAGRHAVLNAINVHQPNLS  359
              +K++GL  Q  L+  Q LYETHK  TYPRSDS YLP+  FA   +VL+++   +P+L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-GDFNSDQKNRCWDDKKVDAHHAIIPTARSSQVS-LSDNEQQIYRLIATQYLMQFCPD  417
            +  G+++  Q++R W+D KV AHH+IIPT  ++++S +S++E  +YRLI ++YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVYRKCVIELDIAGGKFVAKARFLAEAGWRALLGSKERDE-ENDGTP------LPVVTKG  470
              + + V  +  +G ++ A ++ +  +GWR +L+  + ++ + +G        LP + K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVQEK--QTQPPRPFTDATLLSAMTGIARFVQDKDLKKVLRATDGLGTEAT  527
             + L C+ ++V+ K  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHSSPAGRALIHSLPEMAARPDMTAHWESTLTKISEKQCR  587
            RA II  L+ R +L KKGR I++S A+ +LI+++P   A P+ TA WE +L  I   Q  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMSPLVDTLHSLIQQ  605
             + F++     +  LI Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

158) B565_3744 in NC_015424


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  397 bits (1495),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 250/615 (41%), Positives = 419/615 (69%), Gaps = 19/615 (3%)

Query  1    MRLFIAEKPTLGRAIADALPKPHKKGDGFIETAQGDVVTWCIGHLLEQAEPDAYDAAFKQ  60
            MRLF+ EKP+ G+ I+  L   ++ G+G ++ + G  VTWCIGHL+E A P+AYD  +K+
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLNGS-GVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WRMEHLPIIPAQWQLVAKPKTKTQLTVIKRLIKQADCVVNAGDPDREGQLLVDEVIDFLG  120
            W +E+LPIIP +W++  KPKT TQ+ V+K L+ +A  +V A D+DREG+L+  E++++ G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  YPKTKPVQRCLISDLNPPAVRRALDKLRDNKEFVPLAVSALARSRADWLYGINMTRAYTL  180
            Y    P++R  +S LN +++R AL+KLR + E +++  SALARSRADWL G+N++R +T+
Sbjct  119  YRG--PIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLFTV  176

Query  181  LGRKAGCSELLSVGRVQTPLLGLVVRRDLEIEAFVPKPFYEVLAHLLTEGNERFTAKWLP  240
            LGR+AG   +LSVGRVQTP L LVV RD EI  FV+ P+  +   L++ G+  F+A+W+P
Sbjct  177  LGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGST-FAAQWVP  235

Query  241  SEACLPWQDEEGRVLNRALADKVVSRI-NGQPAQVESVEEQARKQAAPLPYNLSSLQIDA  299
            ++AC    D+ GR L +++A++ + +I  + +A+V SVE +  ++++PLP++L++LQ   
Sbjct  236  PDAC---TDDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVC  292

Query  300  AKRFGMDAKRVLDICQSLYERHKLITYPRSDSRYLPTDHFKRAEQVRGaiaatapalaka  359
            +K++G+D +  L+I Q+LYE HK  TYPRSDS YLP   F     V +++  T P+L   
Sbjct  293  SKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRSI  352

Query  360  VSEADGKIRSKAWNDSKVDAHHAIIPTEKQGNPATLGADEAKLYGLIARQYLLQFYPPFE  419
            +++ D   RS+AWND+KV AHH+IIPT   ++ ++++  E  +Y LI  +YL QF P  E
Sbjct  353  MGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPHHE  412

Query  420  YNDSKVLLRIAGGLFQAKARRILKAGWKALLGVEEDDDEEKAG-------TLPAL-KEGE  471
            ++ +   +  +G  + A +++++ +GW+ +L+  + +D +  G        LPAL K  E
Sbjct  413  FDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYE  472

Query  472  QLLCERGELQEK--MTQPPKSFTDATLLAAMTGIARYVQDPEIRKTLRDTDGLGTEATRA  529
             L C+ ++++ K   T PPK++T++ L+ +M G+A+ V DP +++ L+DT G+GTEATRA
Sbjct  473  GLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRA  532

Query  530  GIIDLLFKRRFLVRQGKSIKATPTGRALVQALPATATTPDMTALWEQSLGQIAERHGSYQ  589
             II+ L+ R +LV++G++I+A+ ++ +L++A+PA+ + P+ TA+WEQ+L+ I   + + +
Sbjct  533  NIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLD  592

Query  590  QFMGPLTEQLNGLIE  604
             F+G  +  ++ LI 
Sbjct  593  VFIGKQAAWISQLIA  607

159) Pat9b_2192 in NC_014837


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  390 bits (1468),  Expect = 9e-110, Method: Compositional matrix adjust.
 Identities = 251/618 (41%), Positives = 408/618 (67%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGEGYIACGNDQVVTWCVGHLLEQAQPDSYDSRYAR  60
            MRLF+ EKPS G+ I+ +L   +R GEG +  G++  VTWC+GHL+E A P++YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLADLPIIPEKWQLQPRPSVAKQLKVIEGLLAQATEVVHAGDPDREGQLLVDEVIDYLQ  120
            W++ +LPIIP+ W+++ +P  A Q+KV+ +LLA+AT++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRQKVQRCLINDLNPQAVERAVSRLRENREFIPLCVSALARARADWLYGINMTRAW  180
                 R  ++R  ++ LN  ++  A+++LR + E +++  SALAR+RADWL G+N++R  
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFIPKDYFEVKAHIVTPKDERFVASW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  Y  +   + +  +  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAG-GSTFAAQW  233

Query  241  VPSDACEPWQDEEGRLLHRPLADHVLERI-NGQPARVTAYNDKRESEIAPLPFSLSSLQI  299
            VP+DAC    D+ GR L++P+A++ +++I  + +A+V + +  R  E +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQNVLDCCQRLYETHKLITYPRSDSRYLPEEHFAGRHAVLNAIQAHQPDMT  359
              +K++GL  Q+ L+  Q LYETHK  TYPRSDS YLPE  FA   +VL+++   +P + 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-ADFNPEQRNRCWDDKKVDAHHAIIPTARASKVN-LSENEANIYGLIARQYLMQFCPD  417
            +  ++++  QR+R W+D KV AHH+IIPT  ++K++ +SE+E  +Y LI  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVFRKCVIDLDIAGGKFVAKARFLAEAGWRALLGSKERDEEND-------GTPLPVVSKG  470
              F + V  +  +G ++ A ++ +  +GWR +L+  + ++ ++       +  LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVLAK--QTQPPRPFTDATLLSAMTGIARFVQDKDLKKVLRATDGLGTEAT  527
             + L C+ ++V  K  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFRRTFLVKQGRYIHSTQAGRALIHALPEMAARPDMTAHWESTLTRISEKACR  587
            RA II  L+ R +LVK+GR I++++A+ +LI+A+P   A P+ TA WE +L  I      
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YDEFMQPLVSTLIGLIGQ  605
             D F+    + +  LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

160) RORB6_08625 in NC_021066


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 249/621 (41%), Positives = 404/621 (66%), Gaps = 29/621 (4%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRKGDGYIECGNGQVVTWCIGHLLEQAQPDVYDGRYAR  60
            MRLF+ EKPS G+ I+ +L   +R G+G ++ G+G  VTWCIGHL+E A P+ YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLLDLPIVPEKWQLQPKPSVTKQLNVIKRLLGDAQEVIHAGDPDREGQLLVDEVLD---  117
            W++ +LPI+P+ W+++ KP  + Q++V+K LL+ A +++ A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  118  YLQLAPEKRQQVQRCLINDLNPQAVERAIARLRANSEFIPLCVSALARARADWLYGINMT  177
            Y       R  ++R  ++ LN  ++  A+++LR+++E +++  SALAR+RADWL G+N++
Sbjct  119  Y-------RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLS  171

Query  178  RAYTLLGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPKDERFV  237
            R +T+LGR+AGY+GVLSVGRVQTP L LVV RD EI  FV+  +  +   + +  +  F 
Sbjct  172  RLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAG-GSTFA  230

Query  238  ATWVPSDACEPYQDEEGRLLHRPLAEHVVARI-EGQPARVTAYNDKRDSEPAPLPFSLST  296
            A WVP+DAC    D+ GR L++P+A++ + +I  + +A+V + +  R  E +PLPF L+T
Sbjct  231  AQWVPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGT  287

Query  297  LQIEAAKRFGFSAQNVLDICQKLYETHKLITYPRSDSRYLPEEHFAGRHAVLNAIAVHAA  356
            LQ   +K++G+  Q+ L+I Q LYETHK  TYPRSDS YLPE  FA   +VL+++    +
Sbjct  288  LQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDP  347

Query  357  DLLP-QPAVDPEIRNRCWDDKKVDAHHAIIPTARSSQVK-LSDNEEKVYGLIARQYLMQF  414
             L +    +D   R+R W+D KV AHH+IIPT  ++++  +S++E  VY LI  +YL QF
Sbjct  348  SLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQF  407

Query  415  CPDAVFRKCQIDLDIANGKFVAKARFLAEAGWRALLGNKERDE-ENDGTP------LPVV  467
             P+  F +    +  +  ++ A ++ +  +GWR +L++ + ++ + +G        LP +
Sbjct  408  LPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPAL  467

Query  468  AKD-DELLCEKGEVVER--QTQPPRYFTDATLLSAMTGIARFVQDKELKKILRATDGLGT  524
            +K  + L C+ ++V  +  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GT
Sbjct  468  PKLYEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGT  527

Query  525  EATRAGIIELLFKRGFLVKKGRYIHSTDAGRALIHSLPEMAARPDMTAHWESVLTQISEK  584
            EATRA II  L+ RG+LVKKGR I+++DA+ +LI+++P   A P+ TA WE  L  I   
Sbjct  528  EATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAG  587

Query  585  QCRYQDFMQPLVATLYQLIEQ  605
            Q   + F+    A + QLI Q
Sbjct  588  QLTLDVFIGKQAAWISQLIAQ  608

161) A1122_15330 in NC_017168


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

162) topB in NC_010159


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

163) topB in NC_017265


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

164) topB in NC_017154


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

165) topB in NC_017160


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

166) topB in NC_004088


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

167) topB in NC_014029


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

168) YPTS_2155 in NC_010634


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

169) YPK_2088 in NC_010465


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1442),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

170) topB in NC_009708


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  384 bits (1443),  Expect = 9e-108, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  120
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  417
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVMTLQDLISQ  605
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

171) YPA_1522 in NC_008150


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  383 bits (1441),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

172) topB in NC_003143


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  383 bits (1441),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

173) YPN_1631 in NC_008149


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  383 bits (1441),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

174) YPDSF_0969 in NC_009381


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  383 bits (1441),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

175) topB in NC_014562


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  382 bits (1437),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 250/621 (41%), Positives = 404/621 (66%), Gaps = 29/621 (4%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGDGFIACGNDQIVTWCVGHLLEQAQPDSYDSRYAR  60
            MRLF+ EKPS G+ I+ +L   +R G+G +  G++  VTWC+GHL+E A P++YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLNDLPIIPEKWQLKPRPSVAKQLKVVEGLLAQASEVVHAGDPDREGQLLVDEVLD---  117
            WS+++LPIIP+ W++  +P  A Q+KVV +LLA+A+++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  118  YLNLPPEKRSKVQRCLINDLNPQAVDRAVNRLRENREFIPLCVSALARARADWLYGINMT  177
            Y       R+ ++R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++
Sbjct  119  Y-------RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLS  171

Query  178  RAWTLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPKDYFEVKAHILTPDGARFV  237
            R  T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  Y  +   +++ +G+ F 
Sbjct  172  RLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFA  230

Query  238  ASWIPSEACEPWQDEEGRLLKRALADHVVARI-TGQPAIVTAYSDKRENDVAPLPFSLSS  296
            A W+P++AC    D+ GR L++++A++ + +I ++ +A V +    R  + +PLPF L++
Sbjct  231  AQWVPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGT  287

Query  297  LQIEAAKRYGLSAQTVLDTCQRLYETHKLITYPRSDSRYLPEEHFAGRRTVLKAIQAHQP  356
            LQ   +K+ GL  Q  L+  Q LYETHK  TYPRSDS YLPE  FA   TVL ++   +P
Sbjct  288  LQEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDP  347

Query  357  QLTPP-ADFNADRRNRCWDDKKVDAHHAIIPTARSSAVK-LSENEQHIYELVARQYLMQF  414
             L +  ++++  +R+R W+D KV AHH+IIPT  ++ +  +SE+E  +Y L+  +YL QF
Sbjct  348  SLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQF  407

Query  415  CPDAVFRKCVIDLDIAGGKFMAKARFLAEAGWRALLGSKERDEEND-------GMPLPVV  467
             P+  F + V  +  +G ++ A ++ +  +GWR +L+  + ++ ++       +  LP +
Sbjct  408  LPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPAL  467

Query  468  AKG-DELLCERGEVLAK--QTQPPRPFTDATILSAMTGIARFVQDKELKKVLRATDGLGT  524
            +K  + L C+ ++V  K  +T PP+P+T++ ++ +M G+A++V D  LK+ L+ T G+GT
Sbjct  468  PKLYEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGT  527

Query  525  EATRAGIIELLFRRGFLVKKGRYINSTDAGRALIHSLPDLAARPDMTAQWESTLTRISEK  584
            EATRA II  L+ RG+LVKKGR I ++DA+ +LI+++P   A P+ TA WE +L  I   
Sbjct  528  EATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAG  587

Query  585  ACRYDEFMQPLVQTLTGLIQQ  605
                D F+      ++ LI Q
Sbjct  588  QLTLDVFIGKQAAWISQLIAQ  608

176) topB in NC_006155


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  382 bits (1438),  Expect = 2e-107, Method: Compositional matrix adjust.
 Identities = 250/620 (41%), Positives = 401/620 (65%), Gaps = 27/620 (4%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGGGFIAC--GNDQMVTWCVGHLLEQAQPDAYDSRY  59
            MRLF+ EKPS ++ I+ IL   +R  G    C  G++  VTWC+GHL+E A P+AYD + 
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQRGEG----CLNGSGVTVTWCIGHLVEAAPPEAYDEQL  56

Query  60   ARWSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDY  119
             RWS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++ 
Sbjct  57   KRWSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL  116

Query  120  LGLAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTR  179
             G     R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R
Sbjct  117  CGY----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSR  172

Query  180  AYTILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIA  239
             +T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A
Sbjct  173  LFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAA  231

Query  240  LWQPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTL  298
             W P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TL
Sbjct  232  QWVPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTL  288

Query  299  QIEAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSD  358
            Q   +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ 
Sbjct  289  QEVCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPS  348

Query  359  LLP-LEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDEGKVYRLVAQQYLMQFC  416
            L + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF 
Sbjct  349  LRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFL  408

Query  417  PDAQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVA  469
            P+ +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++
Sbjct  409  PHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALP  468

Query  470  KG-AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTE  526
            K    L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTE
Sbjct  469  KLYEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTE  528

Query  527  ATRAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKN  586
            ATRA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +
Sbjct  529  ATRANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQ  588

Query  587  CRYQDFMQPLVMTLQDLISQ  606
               + F+      + +LI+Q
Sbjct  589  LTLDVFIGKQAAWISQLIAQ  608

177) topB in NC_005810


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  382 bits (1435),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGNDQMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  G++  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVVHAGDPDREGQLLVDEVLDYLG  121
            WS+ +LPIIP+ W+++ +P  + Q++V+K LL +A ++V A D+DREG+L+  E+++  G
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  LAAEKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  F++  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-TGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I ++ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISLHQSDLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LEVMDSDRRNRCWDDKKVDAHHAIIPTACASKVN-LTTDEGKVYRLVAQQYLMQFCPD  418
            + +  +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVAKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVMTLQDLISQ  606
             + F+      + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

178) topB in NC_016041


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  381 bits (1432),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 250/618 (41%), Positives = 401/618 (65%), Gaps = 19/618 (3%)

Query  1    MIVYIAEKPSLGRAIATGFSGKQQKREGYIELDNGDCVTWCVGHLLEQAEPDKYDAAFAK  60
            M +++ EKPS G+ I+  + G  Q+ EG ++ ++G  VTWC+GHL+E A P+ YD  + +
Sbjct  1    MRLFLCEKPSQGKDIGRIL-GATQRGEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLQHLPIVPDKWQLVPKKNTQKQLTVVKRLLKKATHIVNAGDPDREGQLLVDEVITYCG  120
            WS+++LPI+P+ W++  K +T  Q+ VVK LL KATH+V A D+DREG+L+  E++  CG
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  VKASIIENAGRLLINDLNTSAVKKALQNMRTNREFLGLSISALARSRADWLYGLNLTRAY  180
             +++I     RL ++ LN ++++ AL ++R + E L++  SALARSRADWL G+NL+R +
Sbjct  119  YRGPI----ERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGQRGGYSGVLSVGRVQTPVLGLVVRRDQEIAHFVSKPFYEVIASLESQNKKTFNAKW  240
            T+LG+++GY GVLSVGRVQTP L LVV RD+EIA+FVS P+  +  SL      TF A+W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSL-FAGGSTFAAQW  233

Query  241  QPSKACEPYQDEEGRVLSRKLAQTVVNKTRGQ-QAKVTDYKVQNRQsppplpfslsvlQI  299
             P+ AC    D+ GR L + +AQ  +++ R+   A V     +  +  PPLPF L+ LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EASKRFNLSPKMVLDVCQSLYEKHQLITYPRSDSRYLPKDQFGQASNVLGAIKSNVPNFA  359
              SK++ L  +  L++ Q+LYE H+  TYPRSDS YLP   F++ + VL+++    P++ 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  SAVDNANPKLKSKAWNDSKVDAHHAIIPTNRSKAIGSFTQYEGKIYQLIANQYLMQFYGP  419
            S +++ +   +S+AWND+KV AHH+IIPT  +  +++ ++ E  +Y+LI ++YL QF   
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  420  HKYQEQVAKIDIAGGEFVAKGKSSQDLGW-LALTKNQNNASDDNKNDT----LLPQLNKG  474
            H ++  VAK+  +G ++ A GK     GW   L+  Q + +D++ + +    +LP L K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  475  -ELLKC--TDSQLMEKQTSPPKHFTEATLLAAMTGISRYVQDRNIKLILKETDGLGTEAT  531
             E L C  +D +L   +T PPK +T++ L+ +M G+++ V D  +K  LK+T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  532  RATIIDLLFKRQFMQKVGKEVHATETGKALINALPSETTYPDMTATWEADLDKIAQRQLR  591
            RA II+ L+ R ++ K G+ ++A++++ +LI+A+P+  + P+ TA WE  LD I   QL 
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  592  YDGFMQPLTESIARLIDN  609
             D F+   +  I++LI +
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

179) topB in NC_017531


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  381 bits (1433),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 248/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGEGFIACGNDQIVTWCVGHLLEQAQPDVYDSRYAR  60
            MRLF+ EKPS G+ I+ +L   +R GEG +  G++  VTWC+GHL+E A P+ YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLVDLPIIPEKWRLQPRPSVAKQLKVVEGLLAQADEVVHAGDPDREGQLLVDEVLDYLQ  120
            WS+ +LPIIP+ WR++ +P  A Q+KVV +LLA+A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRSKVQRCLINDLNPQAVERAINRLRENREFIPLCVSALARARADWLYGINMTRAW  180
                 R+ ++R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R  
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIANFVPKDYFEVKAHIVTPDESRFTANW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EIA FV+  Y  +   + + + S F+A+W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  IPSEACEPWQDEEGRLLKRSLAEHVVARI-SGQPAIVTAYSDKRENDIAPLPFSLSSLQI  299
            +P++AC    D+ GR L++++A++ + +I ++ +A V +    R  + +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQAVLDICQRLYETHKLITYPRSDSRYLPDEHFAGRHAVLNAIQSHQPDLT  359
              +K++GL  Q  L+I Q LYETHK  TYPRSDS YLP+  FA   +VL+++   +P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-ADFDADRKNRCWDDKKVDAHHAIIPTARASAVK-LNENEQQIYGLVARQYLMQFCPD  417
            +  +++D  +++R W+D KV AHH+IIPT  ++ +  ++E+E  +Y L+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVFRKCTIDLDIAGGKFVAKARFLAEAGWRALLGGKERDEEND-------GMPLPVVAKD  470
              F +    +  +G ++ A ++ +  +GWR +L+  + ++ ++       +  LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVLAK--QTQPPRHFTDATLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
             + L C+ ++V  K  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFRRSFLHKKGRYIHSTDAGKALIHSLPDLAARPDMTAQWESTLTRISEKACR  587
            RA II  L+ R++L KKGR I+++DA+ +LI+++P   A P+ TA WE +L  I      
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YDEFMQPLVQTLSGLIQQ  605
             D F+      +S LI Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

180) PAGR_g1992 in NC_017554


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  381 bits (1433),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 248/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGEGFIACGNDQIVTWCVGHLLEQAQPDVYDSRYAR  60
            MRLF+ EKPS G+ I+ +L   +R GEG +  G++  VTWC+GHL+E A P+ YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLVDLPIIPEKWRLQPRPSVAKQLKVVEGLLAQADEVVHAGDPDREGQLLVDEVLDYLQ  120
            WS+ +LPIIP+ WR++ +P  A Q+KVV +LLA+A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRSKVQRCLINDLNPQAVERAINRLRENREFIPLCVSALARARADWLYGINMTRAW  180
                 R+ ++R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R  
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIANFVPKDYFEVKAHIVTPDESRFTANW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EIA FV+  Y  +   + + + S F+A+W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  IPSEACEPWQDEEGRLLKRSLAEHVVARI-SGQPAIVTAYSDKRENDIAPLPFSLSSLQI  299
            +P++AC    D+ GR L++++A++ + +I ++ +A V +    R  + +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQAVLDICQRLYETHKLITYPRSDSRYLPDEHFAGRHAVLNAIQSHQPDLT  359
              +K++GL  Q  L+I Q LYETHK  TYPRSDS YLP+  FA   +VL+++   +P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-ADFDADRKNRCWDDKKVDAHHAIIPTARASAVK-LNENEQQIYGLVARQYLMQFCPD  417
            +  +++D  +++R W+D KV AHH+IIPT  ++ +  ++E+E  +Y L+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVFRKCTIDLDIAGGKFVAKARFLAEAGWRALLGGKERDEEND-------GMPLPVVAKD  470
              F +    +  +G ++ A ++ +  +GWR +L+  + ++ ++       +  LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVLAK--QTQPPRHFTDATLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
             + L C+ ++V  K  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFRRSFLHKKGRYIHSTDAGKALIHSLPDLAARPDMTAQWESTLTRISEKACR  587
            RA II  L+ R++L KKGR I+++DA+ +LI+++P   A P+ TA WE +L  I      
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YDEFMQPLVQTLSGLIQQ  605
             D F+      +S LI Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

181) topB1 in NC_016816


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  381 bits (1433),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 248/618 (41%), Positives = 403/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGEGFIACGNDQIVTWCVGHLLEQAQPDVYDSRYAR  60
            MRLF+ EKPS G+ I+ +L   +R GEG +  G++  VTWC+GHL+E A P+ YD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLVDLPIIPEKWRLQPRPSVAKQLKVVEGLLAQADEVVHAGDPDREGQLLVDEVLDYLQ  120
            WS+ +LPIIP+ WR++ +P  A Q+KVV +LLA+A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRSKVQRCLINDLNPQAVERAINRLRENREFIPLCVSALARARADWLYGINMTRAW  180
                 R+ ++R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R  
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIANFVPKDYFEVKAHIVTPDESRFTANW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EIA FV+  Y  +   + + + S F+A+W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  IPSEACEPWQDEEGRLLKRSLAEHVVARI-SGQPAIVTAYSDKRENDIAPLPFSLSSLQI  299
            +P++AC    D+ GR L++++A++ + +I ++ +A V +    R  + +PLPF L++LQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQAVLDICQRLYETHKLITYPRSDSRYLPDEHFAGRHAVLNAIQSHQPDLT  359
              +K++GL  Q  L+I Q LYETHK  TYPRSDS YLP+  FA   +VL+++   +P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  PP-ADFDADRKNRCWDDKKVDAHHAIIPTARASAVK-LNENEQQIYGLVARQYLMQFCPD  417
            +  +++D  +++R W+D KV AHH+IIPT  ++ +  ++E+E  +Y L+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AVFRKCTIDLDIAGGKFVAKARFLAEAGWRALLGGKERDEEND-------GMPLPVVAKD  470
              F +    +  +G ++ A ++ +  +GWR +L+  + ++ ++       +  LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELLCERGEVLAK--QTQPPRHFTDATLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
             + L C+ ++V  K  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFRRSFLHKKGRYIHSTDAGKALIHSLPDLAARPDMTAQWESTLTRISEKACR  587
            RA II  L+ R++L KKGR I+++DA+ +LI+++P   A P+ TA WE +L  I      
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YDEFMQPLVQTLSGLIQQ  605
             D F+      +S LI Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

182) topB in NC_008800


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  378 bits (1420),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 253/618 (41%), Positives = 404/618 (66%), Gaps = 23/618 (3%)

Query  2    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGSDNMVTWCVGHLLEQAQPDAYDSRYAR  61
            MRLF+ EKPS ++ I+ IL   +R G+G +  GS+  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  62   WSLADLPIIPEKWRLQPRPSVSKQLNVIKQLLQQADEVIHAGDPDREGQllvdevldyld  121
            WS+ +LPIIP+ WR++ +P  + Q++V+K LL +A +++ A D+DREG+L+  E+++  +
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  122  laaeKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  181
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  182  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIEDFVAKDFFEVKAHIVTPADERFIALW  241
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  242  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-AGQPALVTSYNDKRESETAPLPFSLSTLQI  300
             P+D+C    D+ GR L++P+A++ +++I A+ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  301  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISMHQADLL  360
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  361  P-LDVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDESKVYRLVAQQYLMQFCPD  418
            + ++ +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  419  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVEKG  471
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP + K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  472  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  528
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  529  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  588
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  589  YQDFMQPLVATLQDLISQ  606
             + F+    A + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

183) YE105_C2295 in NC_015224


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  377 bits (1416),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 253/618 (41%), Positives = 404/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGSDNMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  GS+  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWRLQPRPSVSKQLNVIKQLLQQADEVIHAGDPDREGQllvdevldyld  120
            WS+ +LPIIP+ WR++ +P  + Q++V+K LL +A +++ A D+DREG+L+  E+++  +
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  laaeKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIEDFVAKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-AGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I A+ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISIHQADLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LDVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDESKVYRLVAQQYLMQFCPD  417
            + ++ +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVEKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP + K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVATLQDLISQ  605
             + F+    A + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

184) Y11_11191 in NC_017564


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  377 bits (1416),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 253/618 (41%), Positives = 404/618 (66%), Gaps = 23/618 (3%)

Query  1    MRLFIAEKPSLARAIADILPKPHRRGDGFIACGSDNMVTWCVGHLLEQAQPDAYDSRYAR  60
            MRLF+ EKPS ++ I+ IL   +R G+G +  GS+  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WSLADLPIIPEKWRLQPRPSVSKQLNVIKQLLQQADEVIHAGDPDREGQllvdevldyld  120
            WS+ +LPIIP+ WR++ +P  + Q++V+K LL +A +++ A D+DREG+L+  E+++  +
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVELCG  118

Query  121  laaeKRQNVRRCLINDLNPQAVERAVERLRYNREFIPLCVSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A+ +LR + E +++  SALAR+RADWL G+N++R +
Sbjct  119  Y----RGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TILGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIEDFVAKDFFEVKAHIVTPADERFIALW  240
            T+LGR+AGYDGVLSVGRVQTP L LVV RD EI  FV+  +  +   + + ++  F A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFA-GGSTFAAQW  233

Query  241  QPSDSCESYQDEEGRLLHRPLAEHVVNRI-AGQPALVTSYNDKRESETAPLPFSLSTLQI  299
             P+D+C    D+ GR L++P+A++ +++I A+ +A V S +  R  E +PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLNAISIHQADLL  359
              +K++GL  Q+ L+I Q LYETHK  TYPRSD  YLPE  FA   +VL+++   ++ L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-LDVMDSDRRNRCWDDKKVDAHHAIIPTARASKVN-LTTDESKVYRLVAQQYLMQFCPD  417
            + ++ +D  +R+R W+D KV AHH+IIPT  ++K++ ++  E  VYRL+  +YL QF P+
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGSKERDE-ENEGAP------LPVVEKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + EG        LP + K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -AELLCERGEVVER--QTQPPRPFTDASLLSAMTGIARFVQDKELKKVLRATDGLGTEAT  527
               L C+ ++V  +  +T PP+P+T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRTFLFKKGRYIHASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCR  587
            RA II  L+ R +L KKGR I+AS A+ +LI+A+P   A P+ TA WE +L  I   +  
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQLT  590

Query  588  YQDFMQPLVATLQDLISQ  605
             + F+    A + +LI+Q
Sbjct  591  LDVFIGKQAAWISQLIAQ  608

185) ESA_02161 in NC_009778


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  369 bits (1386),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 240/598 (41%), Positives = 386/598 (65%), Gaps = 23/598 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGDGFIECGNGQVVTWCVGHLLEQAQPDAYDSRYGR  60
            MRLF+ EKPS G+ I+ +L   +R G+G ++ G+G  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLADLPIVPEKWQLQPKPSVAKQLNVIKKLLREAQEIVHAGDPDREGQLLVDEVLDYLQ  120
            W++ +LPI+P+ W+++ KP  A Q++V+K LL  A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRQQVRRCLINDLNPQAVERAIDKLRENREFVPLSTSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A++KLR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGQNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPAQERFTALW  240
            T+LG++AGY+GVLSVGRVQTP L LVV RD EI  FV+  +  +   + + +   F+A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGST-FAAQW  233

Query  241  QPSEACEPYQDEEGRLLNRALAEHVVKRI-EGQPAVVTSYNDKRESEAAPLPFSLSTLQI  299
             P++AC    D+ GR L +++A++ +++I  + +A V S +  R  E++PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAARRFNLSAQTVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVLKAIGVHAPDLL  359
              ++++ L  Q  L+I Q LYETHK  TYPRSD  YLPE  FA   +VL ++    P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-QPAVDPERRNRCWDDKKVDAHHAIIPTARSAP-ASLSDGEAKIYGLIARQYLMQFCQD  417
            +    +D  +R+R W+D KV AHH+IIPT  +A  +++S+ E  +Y LI  +YL QF  +
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELEIAGGKFIAKARFLAETGWRALLGAKERDE-ENDGTP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +   GWR +L+  + ++ + +G        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELHCEHGEVVER--QTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEAT  527
             + L C+ ++V  +  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRGFLEKQGRYIHSTPAGKALIHALPELAARPDMTAQWESTLTQISEKQ  585
            RA II  L+ RG+L K+GR I+++ A+ +LI+A+P   A P+ TA WE +L  I   Q
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQ  588

186) CSSP291_10255 in NC_020260


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  369 bits (1386),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 240/598 (41%), Positives = 386/598 (65%), Gaps = 23/598 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGDGFIECGNGQVVTWCVGHLLEQAQPDAYDSRYGR  60
            MRLF+ EKPS G+ I+ +L   +R G+G ++ G+G  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLADLPIVPEKWQLQPKPSVAKQLNVIKKLLREAQEIVHAGDPDREGQLLVDEVLDYLQ  120
            W++ +LPI+P+ W+++ KP  A Q++V+K LL  A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRQQVRRCLINDLNPQAVERAIDKLRENREFVPLSTSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A++KLR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGQNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPAQERFTALW  240
            T+LG++AGY+GVLSVGRVQTP L LVV RD EI  FV+  +  +   + + +   F+A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGST-FAAQW  233

Query  241  QPSEACEPYQDEEGRLLNRALAEHVVKRI-EGQPAVVTSYNDKRESEAAPLPFSLSTLQI  299
             P++AC    D+ GR L +++A++ +++I  + +A V S +  R  E++PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAARRFNLSAQTVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVLKAIGVHAPDLL  359
              ++++ L  Q  L+I Q LYETHK  TYPRSD  YLPE  FA   +VL ++    P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-QPAVDPERRNRCWDDKKVDAHHAIIPTARSAP-ASLSDGEAKIYGLIARQYLMQFCQD  417
            +    +D  +R+R W+D KV AHH+IIPT  +A  +++S+ E  +Y LI  +YL QF  +
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELEIAGGKFIAKARFLAETGWRALLGAKERDE-ENDGTP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +   GWR +L+  + ++ + +G        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELHCEHGEVVER--QTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEAT  527
             + L C+ ++V  +  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRGFLEKQGRYIHSTPAGKALIHALPELAARPDMTAQWESTLTQISEKQ  585
            RA II  L+ RG+L K+GR I+++ A+ +LI+A+P   A P+ TA WE +L  I   Q
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQ  588

187) topB in NC_013282


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  369 bits (1386),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 241/598 (41%), Positives = 389/598 (66%), Gaps = 23/598 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGDGFIECGNGQVVTWCVGHLLEQAQPDAYDSRYGR  60
            MRLF+ EKPS G+ I+ +L   +R G+G ++ G+G  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLADLPIVPEKWQLQPKPSVAKQLNVIKKLLREAQEIVHAGDPDREGQLLVDEVLDYLQ  120
            W++ +LPI+P+ W+++ KP  A Q++V+K LL  A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRQQVRRCLINDLNPQAVERAIDKLRENREFVPLSTSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A++KLR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGQNAGYQGVLSVGRVQTPVLGLVVRRDEEIEHFVAKDFFEVKAHIVTPAQERFTALW  240
            T+LG++AGY+GVLSVGRVQTP L LVV RD EI +FV+  +  +   + + +   F+A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGST-FAAQW  233

Query  241  QPSEACEPYQDEEGRLLNRALAEHVVKRI-EGQPARVTSYNDKREGEAAPLPFSLSTLQI  299
             P++AC    D+ GR L +++A++ +++I  + +A+V S +  R  E++PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EASKRFNLSAQAVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVLKAIGVHASDLL  359
              SK++ L  Q  L+I Q LYETHK  TYPRSD  YLPE  FA   +VL ++    + L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-QPAVDPERRNRCWDDKKVDAHHAIIPTARSAP-ASLSDGEAKIYGLIARQYLMQFCQD  417
            +    +D  +R+R W+D KV AHH+IIPT  +A  +++S+ E  +Y LI  +YL QF  +
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELDIAGGKFIAKARFLAEAGWRTLLGAKERDE-ENDGTP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +  +GWR +L+  + ++ + +G        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELHCERGEVVER--QTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEAT  527
             + L C+ ++V  +  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRGFLEKQGRYIHSTPAGKALIHALPELAARPDMTAQWESTLTQISEKQ  585
            RA II  L+ RG+L K+GR I+++ A+ +LI+A+P   A P+ TA WE +L  I   Q
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQ  588

188) topB in NC_017933


> AF440523|110|G101|24461623|AAN62194.1|Pseudomonas_aeruginosa_C|-|120574..122604|topB|-|putative 
DNA topoisomerase III
Length=676

 Score =  369 bits (1385),  Expect = 4e-103, Method: Compositional matrix adjust.
 Identities = 240/598 (41%), Positives = 386/598 (65%), Gaps = 23/598 (3%)

Query  1    MRLFIAEKPSLGRAIADVLPKPHRRGDGFIECGNGQVVTWCVGHLLEQAQPDAYDSRYGR  60
            MRLF+ EKPS G+ I+ +L   +R G+G ++ G+G  VTWC+GHL+E A P+AYD +  R
Sbjct  1    MRLFLCEKPSQGKDIGRILGATQR-GEGCLN-GSGVTVTWCIGHLVEAAPPEAYDEQLKR  58

Query  61   WNLADLPIVPEKWQLQPKPSVAKQLNVIKKLLREAQEIVHAGDPDREGQLLVDEVLDYLQ  120
            W++ +LPI+P+ W+++ KP  A Q++V+K LL  A ++V A D+DREG+L+  E+++   
Sbjct  59   WSVEQLPIIPQHWRVEVKPKTATQFKVVKALLAKATHLVIATDADREGELIAREIVEL--  116

Query  121  LPAEKRQQVRRCLINDLNPQAVERAIDKLRENREFVPLSTSALARARADWLYGINMTRAY  180
                 R  + R  ++ LN  ++  A++KLR + E +++  SALAR+RADWL G+N++R +
Sbjct  117  --CGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARSRADWLVGMNLSRLF  174

Query  181  TLLGQNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPAQERFTALW  240
            T+LG++AGY+GVLSVGRVQTP L LVV RD EI  FV+  +  +   + + +   F+A W
Sbjct  175  TVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGST-FAAQW  233

Query  241  QPSEACEPYQDEEGRLLNRALAEHVVKRI-EGQPAVVTSYNDKRESEAAPLPFSLSTLQI  299
             P++AC    D+ GR L +++A++ +++I  + +A V S +  R  E++PLPF L+TLQ 
Sbjct  234  VPPDACT---DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQE  290

Query  300  EAARRFNLSAQTVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVLKAIGVHAPDLL  359
              ++++ L  Q  L+I Q LYETHK  TYPRSD  YLPE  FA   +VL ++    P L 
Sbjct  291  VCSKQLGLDVQETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLR  350

Query  360  P-QPAVDPERRNRCWDDKKVDAHHAIIPTARSAP-ASLSDGEAKIYGLIARQYLMQFCQD  417
            +    +D  +R+R W+D KV AHH+IIPT  +A  +++S+ E  +Y LI  +YL QF  +
Sbjct  351  SIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIRSHYLAQFLPH  410

Query  418  AQFRKCVIELEIAGGKFIAKARFLAETGWRALLGAKERDE-ENDGTP------LPVVAKG  470
             +F + V  +  +G ++ A ++ +   GWR +L+  + ++ + +G        LP ++K 
Sbjct  411  HEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKL  470

Query  471  -DELHCERGEVVER--QTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEAT  527
             + L C+ ++V  +  +T PP+ +T++ L+ +M G+A++V D  LK+ L+ T G+GTEAT
Sbjct  471  YEGLACQVADVDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEAT  530

Query  528  RAGIIELLFKRGFLEKQGRYIHSTPAGKALIHALPELAARPDMTAQWESTLTQISEKQ  585
            RA II  L+ RG+L K+GR I+++ A+ +LI+A+P   A P+ TA WE +L  I   Q
Sbjct  531  RANIIGGLIARGYLVKKGRAIRASDAAFTLIDAVPAAIADPGTTAVWEQALDMIEAGQ  588