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PAthogenisity Island DataBase (PAI DB)

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Homologs of CDHC03_0162 gene of NC_016787_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CDHC03_0162
( YP_005137211.1 )

transposase-like protein

NC_016787
(Corynebacterium diphtheriae HC03)

7e-33

100

2) MSMEI_1688
( YP_006566455.1 )

transposase for IS3520

NC_018289
(Mycobacterium smegmatis MC2 155)

0.006

3) MSMEI_2748
( YP_006567511.1 )

transposase for IS3520

NC_018289
(Mycobacterium smegmatis MC2 155)

0.006

4) MSMEI_4970
( YP_006569709.1 )

transposase for IS3520

NC_018289
(Mycobacterium smegmatis MC2 155)

0.006

5) MSMEG_1728
( YP_886101.1 )

ISMsm1, transposase orfA

NC_008596
(Mycobacterium smegmatis MC2 155)

0.006

6) MSMEG_2819
( YP_887147.1 )

ISMsm1, transposase orfA

NC_008596
(Mycobacterium smegmatis MC2 155)

0.006

7) MSMEG_5096
( YP_889345.1 )

ISMsm1, transposase orfA

NC_008596
(Mycobacterium smegmatis MC2 155)

0.006

• Sequence Alignments

1) CDHC03_0162 in NC_016787


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score =  133 bits (489),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MPRKIWprcqrsrgpprgrphpggEHVHAGSLQDRGTQSWVFRGTQRGNGRKPARREGRV  60
            MPRKIWPRCQRSRGPPRGRPHPGGEHVHAGSLQDRGTQSWVFRGTQRGNGRKPARREGRV
Sbjct  1    MPRKIWPRCQRSRGPPRGRPHPGGEHVHAGSLQDRGTQSWVFRGTQRGNGRKPARREGRV  60

Query  61   VESMPEDLAAENARLRLENHQLRGTNELLKAASAFFASEPGPKR  104
            VESMPEDLAAENARLRLENHQLRGTNELLKAASAFFASEPGPKR
Sbjct  61   VESMPEDLAAENARLRLENHQLRGTNELLKAASAFFASEPGPKR  104

2) MSMEI_1688 in NC_018289


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104

3) MSMEI_2748 in NC_018289


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104

4) MSMEI_4970 in NC_018289


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104

5) MSMEG_1728 in NC_008596


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104

6) MSMEG_2819 in NC_008596


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104

7) MSMEG_5096 in NC_008596


> NC_016787_P1|11|G10|376250330|YP_005137211.1|Corynebacterium_diphtheriae_HC03|+|14471..14785|-|CDHC03_0162|transposase-like 
protein
Length=104

 Score = 34.3 bits (110),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 33/80 (42%), Positives = 49/80 (62%), Gaps = 9/80 (11%)

Query  36   HVGELLGINEATLRNWV--ENRHGSGRPAA---GAVMSS-AGDKDAELAALRKENAELRR  89
            H G L   ++   ++WV    ++G+GR +A   G V+ S + D  AE A LR EN +LR 
Sbjct  28   HAGSL---QDRGTQSWVFRGTQRGNGRKPARREGRVVESMPEDLAAENARLRLENHQLRG  84

Query  90   ANEILKTASAFFAAAEVDRR  109
            +NE+LK+ASAFFA+    +R
Sbjct  85   TNELLKAASAFFASEPGPKR  104