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PAthogenisity Island DataBase (PAI DB)

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Homologs of HPP12_0447 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPP12_0447
( YP_002301083.1 )

DNA methylase

NC_011498
(Helicobacter pylori P12)

0.0

100

2) HPG27_980
( YP_002266599.1 )

adenine specific DNA methyltransferase

NC_011333
(Helicobacter pylori G27)

0.0

3) HPLT_07815
( YP_005773653.1 )

adenine specific DNA methyltransferase

NC_017362
(Helicobacter pylori Lithuania75)

0.0

4) HPIN_03820
( YP_005782077.1 )

adenine specific DNA methyltransferase

NC_017372
(Helicobacter pylori India7)

0.0

5) K751_08590
( YP_008357855.1 )

helicase

NC_021218
(Helicobacter pylori UM066)

0.0

6) HMPREF0462_1507
( YP_005786073.1 )

DNA methylase

NC_017375
(Helicobacter pylori 83)

0.0

7) HPSNT_00360
( YP_005786238.1 )

DNA methylase

NC_017376
(Helicobacter pylori Santal49)

0.0

8) HPSH_04510
( YP_001910367.1 )

hypothetical protein

NC_010698
(Helicobacter pylori Shi470)

0.0

9) HPSA_07665
( YP_005772087.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

0.0

10) HPELS_04195
( YP_005424955.1 )

adenine specific DNA methyltransferase

NC_017063
(Helicobacter pylori ELS37)

0.0

11) HPSA_04625
( YP_005771514.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

0.0

12) HPSH417_07570
( YP_006225124.1 )

hypothetical protein

NC_017739
(Helicobacter pylori Shi417)

0.0

13) HPSA20_1113
( YP_008472059.1 )

eco57I restriction-modification methylase family protein

NC_022130
(Helicobacter pylori SouthAfrica20)

0.0

14) HPSJM_06910
( YP_003929259.1 )

adenine specific DNA methyltransferase

NC_014560
(Helicobacter pylori SJM180)

0.0

15) HPF57_0303
( YP_005777017.1 )

hypothetical protein

NC_017367
(Helicobacter pylori F57)

0.0

16) HPPC18_04955
( YP_006229222.1 )

adenine specific DNA methyltransferase

NC_017742
(Helicobacter pylori PeCan18)

0.0

17) HPSH112_06985
( YP_006228075.1 )

hypothetical protein

NC_017741
(Helicobacter pylori Shi112)

0.0

18) HPAKL117_02240
( YP_007017000.1 )

hypothetical protein

NC_019560
(Helicobacter pylori Aklavik117)

0.0

19) HPSH112_01305
( YP_006226981.1 )

hypothetical protein

NC_017741
(Helicobacter pylori Shi112)

0.0

20) HPOK113_0528
( YP_007536642.1 )

hypothetical protein

NC_020508
(Helicobacter pylori OK113)

0.0

• Sequence Alignments

1) HPP12_0447 in NC_011498


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 4268 bits (16235),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2808/2808 (100%), Positives = 2808/2808 (100%), Gaps = 0/2808 (0%)

Query  1     MVLLIKTYSKGLHMQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKT  60
             MVLLIKTYSKGLHMQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKT
Sbjct  1     MVLLIKTYSKGLHMQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKT  60

Query  61    QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI  120
             QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI
Sbjct  61    QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI  120

Query  121   TKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVK  180
             TKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVK
Sbjct  121   TKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVK  180

Query  181   EYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESInnentklntndneeV  240
             EYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEV
Sbjct  181   EYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEV  240

Query  241   KKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADN  300
             KKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADN
Sbjct  241   KKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADN  300

Query  301   ANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVN  360
             ANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVN
Sbjct  301   ANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVN  360

Query  361   GDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSAnnnnpi  420
             GDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPI
Sbjct  361   GDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPI  420

Query  421   nntietntsnniiknndnnHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQE  480
             NNTIETNTSNNIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQE
Sbjct  421   NNTIETNTSNNIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQE  480

Query  481   IHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERD  540
             IHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERD
Sbjct  481   IHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERD  540

Query  541   RIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIprppqspsh  600
             RIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSH
Sbjct  541   RIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSH  600

Query  601   qqnssRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANEN  660
             QQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANEN
Sbjct  601   QQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANEN  660

Query  661   GDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQ  720
             GDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQ
Sbjct  661   GDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQ  720

Query  721   KRGllsnldhlesllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKI  780
             KRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKI
Sbjct  721   KRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKI  780

Query  781   FYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQE  840
             FYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQE
Sbjct  781   FYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQE  840

Query  841   SKITDNSVELnnaqeqtaqeqdtqKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANI  900
             SKITDNSVELNNAQEQTAQEQDTQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANI
Sbjct  841   SKITDNSVELNNAQEQTAQEQDTQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANI  900

Query  901   KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLT  960
             KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLT
Sbjct  901   KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLT  960

Query  961   KDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020
             KDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD
Sbjct  961   KDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020

Query  1021  KNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYD  1080
             KNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYD
Sbjct  1021  KNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYD  1080

Query  1081  KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN  1140
             KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN
Sbjct  1081  KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN  1140

Query  1141  SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFI  1200
             SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFI
Sbjct  1141  SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFI  1200

Query  1201  PSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNE  1260
             PSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNE
Sbjct  1201  PSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNE  1260

Query  1261  QTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKL  1320
             QTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKL
Sbjct  1261  QTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKL  1320

Query  1321  PKGVYQYHkttlktdtliidtNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIF  1380
             PKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIF
Sbjct  1321  PKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIF  1380

Query  1381  LRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKF  1440
             LRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKF
Sbjct  1381  LRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKF  1440

Query  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTL  1500
             GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTL
Sbjct  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTL  1500

Query  1501  NPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNG  1560
             NPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNG
Sbjct  1501  NPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNG  1560

Query  1561  GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWI  1620
             GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWI
Sbjct  1561  GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWI  1620

Query  1621  PTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYG  1680
             PTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYG
Sbjct  1621  PTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYG  1680

Query  1681  IRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEE  1740
             IRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEE
Sbjct  1681  IRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEE  1740

Query  1741  LKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIF  1800
             LKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIF
Sbjct  1741  LKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIF  1800

Query  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN  1860
             RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN
Sbjct  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN  1860

Query  1861  ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnae  1920
             ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAE
Sbjct  1861  ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAE  1920

Query  1921  knFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD  1980
             KNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD
Sbjct  1921  KNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD  1980

Query  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSE  2040
             EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSE
Sbjct  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSE  2040

Query  2041  MYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100
             MYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS
Sbjct  2041  MYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100

Query  2101  TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160
             TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI
Sbjct  2101  TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160

Query  2161  IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY  2220
             IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY
Sbjct  2161  IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY  2220

Query  2221  LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG  2280
             LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG
Sbjct  2221  LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG  2280

Query  2281  NLIAPSkkelenelkekeakSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDA  2340
             NLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDA
Sbjct  2281  NLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDA  2340

Query  2341  KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRG  2400
             KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRG
Sbjct  2341  KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRG  2400

Query  2401  IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF  2460
             IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF
Sbjct  2401  IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF  2460

Query  2461  NMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDY  2520
             NMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDY
Sbjct  2461  NMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDY  2520

Query  2521  LKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHK  2580
             LKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHK
Sbjct  2521  LKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHK  2580

Query  2581  KLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEF  2640
             KLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEF
Sbjct  2581  KLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEF  2640

Query  2641  SLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELE  2700
             SLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELE
Sbjct  2641  SLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELE  2700

Query  2701  NSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS  2760
             NSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS
Sbjct  2701  NSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS  2760

Query  2761  KEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808
             KEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM
Sbjct  2761  KEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

2) HPG27_980 in NC_011333


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 4054 bits (15421),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2639/2808 (94%), Positives = 2735/2808 (98%), Gaps = 13/2808 (0%)

Query  1     MQKKKAKNPQPNLFSILDNGDIATNNPTEESDKINEIQDPLPYVVKTQINKASMISRDPI  60
             MQKKKAKNPQPNLFSILDNGDIATNNP EESD++NEIQ+PLPYVVKTQIN A MISR+PI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWAKYLSFEKRVYKDNSKEDVNFFANGEIKESSRVYEANKEGFERRITKRYDLIDTIRNR  120
             EWA+YLSFE+RV KDNSKEDVNFFANGEIKESSRVYEAN EGFERRITKRYDLIDTIRNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFFPREIEILTYTNSLEELKEQGLEIQLTHYNETHKKTLENGNEIAKEYDYLKDIYQEVE  180
             EFF+REIEILTYTNSLEELKEQGLEIQLTH NETHKKTLENGNEI KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RTKDGELVREIIPSISSAECFKLYNKLPFESInnentklntnaneeVKKLEFELAKEVHT  240
             RT+DG LVREIIP++SS E FKLYNKLPFESINNENTKLNTN NEEVKKLEFELAKEVH+
Sbjct  194   RTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA  253

Query  241   LILEQQLLSATNYYPWIDKDDYANFAWKMHRLINENKLKENHLSADNANKIEQFFFNNGS  300
             LILEQQLLSAT+YYPWIDKDD ANFAWKMHRLINENKLKENHLSADNANKI QFFFNNG 
Sbjct  254   LILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  313

Query  301   ILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYYESVYVNGDGNQREIRPFKE  360
             ILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQKYYESVYVNGDGN+REI+PFKE
Sbjct  314   ILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKE  373

Query  361   ILRDINNFEKAYQQRYDKLVSLNAAIIQAKEGGNERQnsnaknnnninntietntsnnii  420
             ILRD+NNFEKAYQQRY+ LVSLN AIIQAKE++NERQ+S+A+NNN INNTIETNTSNNII
Sbjct  374   ILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNII  433

Query  421   qnndnnhpnLSVADLELEQQNLGEPNGKERTNRTDEPNGTRAGIPQEIHRRSEPRGQQEG  480
             +NNDNNHPNLSVADLELEQQNLGE NGKE+TNR+DEPNGTRAGIPQEIHRRSE   +QEG
Sbjct  434   KNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEG  493

Query  481   MERSRDEELLHQDPSLFIEPREQGGTRGVHRSSDQQAVSEKPHRERDRIHEHVSRGDGVS  540
             MERS DEEL HQD+SLFIEPREQG TRGV RSSDQQAVS K+HRERDRIHEHVSRGDG+S
Sbjct  494   MERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGIS  553

Query  541   ARAEARANSNGASSPASRMENGTRSEEKGDNPSNERGIpqppqspshqqnssRDLGLSLS  600
             ARAEARANSNGASSPASRMENG+RSEEKGDNP++ERGIP+PPQSPSHQQNSSRDLGLSLS
Sbjct  554   ARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLS  613

Query  601   REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDKSSDRANENGDKSPRQNGSANQ  660
             REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELD+SSDRANENGD+SPRQNGSANQ
Sbjct  614   REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQ  673

Query  661   EGARSERYGIAPRSSNQSVLPLAQSRLHLAGLGAPNGFRDLEQNRDQKRGllsnldhles  720
             EGAR+ER+GIAPRSSNQSVLPLAQSRLH AGL++PNG+  LE+NRDQKRGLLSNLDHLES
Sbjct  674   EGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLES  733

Query  721   llnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKK  780
             LLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKK
Sbjct  734   LLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKK  793

Query  781   VLEILENRLKKSIETANETLNAFNALDSQTIDLNAISNSVGLNPTQEIKITDNSVELNNA  840
             VLEILENRLKKSIET+NE+LNAFNALDSQ+IDLNAISNS+GLNPTQE KITDNSVELNNA
Sbjct  794   VLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNA  853

Query  841   qeqtvqeqdtqeNApttikqetkeqetptapaIPLNPKIDFKPSKEVLIKGAKTRYKANI  900
             QEQT QEQDTQ NAPTT               IPLNPKIDFKPS EVLIKGAKTRYKANI
Sbjct  854   QEQTAQEQDTQKNAPTTPA-------------IPLNPKIDFKPSEEVLIKGAKTRYKANI  900

Query  901   KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQHPEEFKELNALLT  960
             KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQ PEEFKELNALLT
Sbjct  901   KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLT  960

Query  961   KDEFRRAYLSARDAYYTPKLVIDSIYRALDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020
             KDEFRRAYLSARDAYYTPKLVIDSIY+AL+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSD
Sbjct  961   KDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020

Query  1021  KNYRFMGTELDPTSASISQFLYPNQVIQNTALENHPFHQDYDAFVGNPPYGNHKIYSSND  1080
             KNYRFMGTELDP SASISQFLYPNQVIQNTALENH F QDYDAFVGNPPYGNHKIYS  D
Sbjct  1021  KNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYD  1080

Query  1081  AELSNESVHNYFLGKAIKELKDNGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN  1140
              ELSNESVHNYFLGKAIKELKD+GIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN
Sbjct  1081  KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN  1140

Query  1141  SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKILNSLDDDTLFALQNNRFDSFI  1200
             SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKI+N+LDDDTLFALQNNRFDSFI
Sbjct  1141  SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFI  1200

Query  1201  PSDQLKIVNAIASHFGFKQEKLQRWYEEIDTANFGYKEQDYEIIKDFMDKVGENNINLNE  1260
             PSDQLKIVNAIASHFGF+QEKLQRWYE IDTANFGYKEQDYEIIKDFMDKVGENNI+LNE
Sbjct  1201  PSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNE  1260

Query  1261  QTLNEYFIHHPENILGRLSLEKTRYSFETNGEQIYKYELQALEDKSLDLSQALNQAIEKL  1320
             QTLNEYFIHHPENILG+LSLEKTRYS E NGEQIYKYELQALEDKSLDLSQALNQAIEKL
Sbjct  1261  QTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKL  1320

Query  1321  PKDVYQYHKTTLKTDALIIDANNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNEMGIF  1380
             PK+VYQYHKTTLKTD+LIID+NNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNE GIF
Sbjct  1321  PKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIF  1380

Query  1381  LKPTKINSKVQDSRLKAYFKIKDALNDLTSAELNPLSSDLELESKRAKLNLVYDGFVKKF  1440
             L+PTKINSK QDSRLKAYFKIKDALNDLTSAELNPLSSDLELE+KRAKLNLVYD FVKKF
Sbjct  1381  LRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKF  1440

Query  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTL  1500
             GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTL
Sbjct  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTL  1500

Query  1501  NPKKELIITNAKEALIASINQKGGLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDDG  1560
             NPKKELIITNAKEALIASINQKG LDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKD+G
Sbjct  1501  NPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNG  1560

Query  1561  GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANLKDLELIIPKDLKATEIMANINSPWI  1620
             GYILANDYLSGNVKRKLKEVKEAINQGVEGLEAN+KDLELIIPKDLKATEIMANINSPWI
Sbjct  1561  GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWI  1620

Query  1621  PTQYLEEFLIELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGTYEVSIRSNELNELYG  1680
             PTQYLEEFL+ELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNG+YEVSIRSNELNELYG
Sbjct  1621  PTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYG  1680

Query  1681  IRHKDKPHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEE  1740
             IRHKD++HSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEE
Sbjct  1681  IRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEE  1740

Query  1741  LKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIF  1800
             LKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIF
Sbjct  1741  LKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIF  1800

Query  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN  1860
             RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN
Sbjct  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN  1860

Query  1861  ANVLVVDSKDITEKERELLYNQIANNNYDAVIIAHTHLELLSNPREIIEGLKEEKLVNAE  1920
             ANVLVVDSKDITEKERELL+NQIANNNYDAVIIAHTHLELLSNPR IIE LKEE LVNAE
Sbjct  1861  ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAE  1920

Query  1921  KNFERQELAYKNNPRETKKPNERAFKNKLDKIRAQYDAILEKQGSHIDISQMGIDNLIVD  1980
             KNFERQELAY+NNPRETKKPNERAFKNKLDKIRA+YDAILEKQGSHIDISQMGIDNLIVD
Sbjct  1921  KNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD  1980

Query  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSE  2040
             EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSE
Sbjct  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSE  2040

Query  2041  MYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100
             MYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS
Sbjct  2041  MYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100

Query  2101  TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160
             TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI
Sbjct  2101  TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160

Query  2161  IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENY  2220
             IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENY
Sbjct  2161  IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY  2220

Query  2221  LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG  2280
             LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG
Sbjct  2221  LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENG  2280

Query  2281  NLIAPSkkelenelkekeARSVNLDEEIAKGCSFDVYSDVLRYLVQMGIPQNEIAFIHDA  2340
             NLIAPSKKELENELKEKEA+SVNLDEEIAKGC FDVYSDVLR LVQMGIPQNEIAFIHDA
Sbjct  2281  NLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDA  2340

Query  2341  KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRSDELLQMEGRG  2400
             KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWR+DELLQMEGRG
Sbjct  2341  KTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRG  2400

Query  2401  IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF  2460
             IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF
Sbjct  2401  IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF  2460

Query  2461  NMGSSNASEMKAEATGNSLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKNNSSQWDY  2520
             NMGSSNASEMKAEATGN+LIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLKNN+SQWDY
Sbjct  2461  NMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDY  2520

Query  2521  LKQELKDLETLQSSVIIPTHTEIKLYDLKNEESKDYELIKVKEIEPLKENASMSEELTRK  2580
             LKQELKDLETLQSS+IIPTHTEIKLYDLKNEESKDYELIKVKE+EPLKENASMSEEL++K
Sbjct  2521  LKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHK  2580

Query  2581  KLKEQNKQITEQNKEKLDAIKKQFANNLNDLFFNEERDCKLLEYKGFMVNAYKTKYQVEF  2640
             KLKEQNKQI+EQNKEKLD+IKKQFA+NLNDLFFNEERDCKLLEYKGF+VNAYKTKYQVEF
Sbjct  2581  KLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEF  2640

Query  2641  SLSPKDNPNVAYSPSNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELE  2700
             SLSPKDNPNV+YSPSNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELE
Sbjct  2641  SLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELE  2700

Query  2701  NSIETTKENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS  2760
             NSIETT+ENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS
Sbjct  2701  NSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS  2760

Query  2761  KEVLEKMNAEKRASLVDESVTEEVKEQANQEAHRPMKKAANDDYDMGV  2808
             KEVL ++NAEKRASL +ESVTEE+KEQANQEAHRPMKKAANDDYDMG+
Sbjct  2761  KEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

3) HPLT_07815 in NC_017362


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 4009 bits (15251),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2600/2810 (93%), Positives = 2701/2810 (97%), Gaps = 37/2810 (1%)

Query  6     NKKKLKELREQPNLFSILYDGDVINTTHYKQENTNTALEPTIELENGLKSQELALENQQE  65
             +KKK K+   QPNLFSIL +GD+                    +E++ + +E+     QE
Sbjct  15    QKKKAKN--PQPNLFSILDNGDIATNNP---------------IEESDRVNEI-----QE  52

Query  66    PLPYVVKTQINKASMISRNPIEWARYLSFEKRAYKDNSKEDVNFFANGEIKESSRVYEAN  125
             PLPYVVKTQIN A MISRNPIEWARYLSFE+R  KDNSKEDVNFFANGEIKESSRVYEAN
Sbjct  53    PLPYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEAN  112

Query  126   EEGFERRITKRYDLID--RNREFFPREIEILTHTNSLEELKKQGLEIQLTHHSETHKKTL  183
             EEGFERRITKRYDLID  RNREFF+REIEILT TNSLEELK QGLEIQLTHH+ETHKKTL
Sbjct  113   EEGFERRITKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTL  172

Query  184   ENGNEIAKEYDYLKDIYQEVERTQDGKLVREIIPRVSSAECFKLYNKLPFESINNENTKL  243
             ENGNEI KEYDYLKDIYQEVERTQDGKLVREIIP +SS E FKLYNKLPFESINNENTKL
Sbjct  173   ENGNEIVKEYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKL  232

Query  244   NTSDNEEVKKLEFELAKEVHALILEQKLLSATNYYSWIDKDDNANFAWKMHRLINENKLK  303
             NT+DNEEVKKLEFELAKEVHALILEQ+LLSAT+YY+WIDKDDNANFAWKMHRLINENKLK
Sbjct  233   NTNDNEEVKKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLK  292

Query  304   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAMQENGDYSLRSALLSLKEIAQAKIELQK  363
             ENHLSADNANKIKQFFFNNGFILGWTKEEQSA+QEN DYSL+S LLSL EIAQAKIELQK
Sbjct  293   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQK  352

Query  364   YYESVYVNGDGNKRDIKPFKEILRDTNNFEKAYQQRYNKLVSLNEAIIQAKESSNERQks  423
             YYESVYVNGDGNKR+IKPFKEILRD NNFEKAYQQRYN LVSLNEAIIQAKESSNERQKS
Sbjct  353   YYESVYVNGDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKS  412

Query  424   sannnntiknttktntsnniiqnndnnnpnLSVADLELEQQNLGEPNGKERTNRADEPSR  483
             SANNNN I+NT  TNTSNNII+NNDNN+PNLSVADLELEQQNLGE NGKE+TNRADEP+ 
Sbjct  413   SANNNNPINNTIETNTSNNIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNG  472

Query  484   ARAGIPQEIHRRSEHGGLQEGVERSSDEDLSHQDPSLFIEPREQGGTRGVYRSSDQQAVS  543
             +RAGIPQEIHRRSEHG  QEG+ERSSDE+LSHQD+SLFIEPREQG TRGVYRSSDQQAVS
Sbjct  473   TRAGIPQEIHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVS  532

Query  544   EKSHRERDRIHEHVSRGDGVSARADARANSNGASSPASRMENGTRSEEKGDNPQNERGIp  603
              KSHRERDRIHEHVSRGDG+SARA+ARANSNGASSPASRMENG+RSEEKGDNP +ERGIP
Sbjct  533   KKSHRERDRIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIP  592

Query  604   qppqspshqqnssRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNSELDK  663
             +PPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNN ELD+
Sbjct  593   RPPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDN  652

Query  664   SSDRANENGDRSPRQNGSANQESARSERYGIAPGSSNQSVLPLAQSRLHHAGLSTPNGLG  723
             SSDRANENGDRSPRQNGSANQE+AR+ER+GIAP SSNQSVLPLAQSRLHHAGLSTPNGLG
Sbjct  653   SSDRANENGDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLG  712

Query  724   NLEENRDQKRGllsnldhlesllnAIRNNTIASEPDFRFRLLEAIQNNEPLKDSIVGPQL  783
             +LEENRDQKRGLLSNLDHLESLLNAIRNNTIASEPDFR RLLEAIQNNEPLKDS+VG+QL
Sbjct  713   SLEENRDQKRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQL  772

Query  784   LKDPTTKIFYDKFQLKISPKKVLEILENRIQKSIETTNEALNAFNVLDSQAIDLNAISNS  843
             LKDPTTKIFYDKFQLKISPKKVLEILENR++KSIETTNEALNAFN LDSQAIDLNAISNS
Sbjct  773   LKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNS  832

Query  844   VGLNPTQESKITDNSVELNNAQEQTVQEQDMQENAPTTLKQETKEQEIPTAPAIPLNPKI  903
             +GLNPTQESKITDNSVELNNAQEQT QEQD Q NAPTT             PAIPLNPKI
Sbjct  833   IGLNPTQESKITDNSVELNNAQEQTAQEQDTQKNAPTT-------------PAIPLNPKI  879

Query  904   DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGGYYATLKEQEILAQFSGWGGL  963
             DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKG+YYATLKEQEILAQFSGWGGL
Sbjct  880   DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGL  939

Query  964   ESYFKKDQHPEEFKELNALLTKDEFRRAYSSTRDAYYTPKLVIDSIYQALDQLGFNNDNH  1023
             ESYFKK Q PEEFKELNALLTKDEFRRAY S+RDAYYTPKLVIDSIYQAL+QLGFNNDNH
Sbjct  940   ESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNH  999

Query  1024  QKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALEKHSFHQ  1083
             QKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALE+H F Q
Sbjct  1000  QKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQ  1059

Query  1084  DYDAFVGNPPYGNHKIYSSNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN  1143
             DYDAFVGNPPYGNHKIYS  DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN
Sbjct  1060  DYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN  1119

Query  1144  PKMREHIAKNATFLGAIRLPNSVFKGTGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKI  1203
             PKMREHIAKNATFLGAIRLPNSVFK+TGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKI
Sbjct  1120  PKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKI  1179

Query  1204  INGLDDDTLFALQNNRFDSFTPSDQLKIVNAIASHFGLKQEKLQRWYEKIDTANFGYKEQ  1263
             INGLDDDTLFALQNNRFDSF PSDQLKIVNAIASHFG++QEKLQRWYEKIDTANFGYKEQ
Sbjct  1180  INGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQ  1239

Query  1264  DYEIIKDFMDKVGKNNINLNEQTLNEYFIHHPENILGHLSLEETRYSFEVNGEQIYKYEL  1323
             DYEIIKDFMDKVG NNI+LNEQTLNEYFIHHPENILGHLSLE TRYS EVNGEQIYKYEL
Sbjct  1240  DYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYEL  1299

Query  1324  QALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDALIIDANNERYQEVQKLIKNVERG  1383
             QALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTD+LIID+NNERYQEVQKLIKN+ERG
Sbjct  1300  QALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERG  1359

Query  1384  ELVKWDNLYYQLEQNNERGIFLKPTKINSKVQDSRLKAYFKIKDALNDLTSAELNPLSSD  1443
             ELVKWD+LY+QLEQNNERGIFL+PTKINSK QDSRLKAYFKIKDALNDLTSAELNPLSSD
Sbjct  1360  ELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSD  1419

Query  1444  LELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKM  1503
             LELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+
Sbjct  1420  LELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKI  1479

Query  1504  QNIEPRQAQAKKAHIFFERTLNPKKELIITNAKEALIASINQKGGLDLHFIRDHFTTQSL  1563
             QNIEPRQAQAKKA+IFFERTLNPKKELIITNAKEALIASINQKG LDLHFI+DHFTTQSL
Sbjct  1480  QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSL  1539

Query  1564  ETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANLKDLE  1623
             ETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEAN+KDLE
Sbjct  1540  ETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLE  1599

Query  1624  LIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKV  1683
             LIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKV
Sbjct  1600  LIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKV  1659

Query  1684  EHLSGAYEVSVRNNELNELYGIRHKDKAHSYKVPFESLLNKVLNNKDLSVKYAQVDPNDP  1743
             EHL+GAYEVS+R+NELNELYGIRHKD+AHSYK PFESLLNKVLNNKDLSVKYAQVDPNDP
Sbjct  1660  EHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDP  1719

Query  1744  KKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQ  1803
             KKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQ
Sbjct  1720  KKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQ  1779

Query  1804  LELEGFNQHISLRPHQKNAVFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL  1863
             LELEGFN++I LRPHQKNA+FRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL
Sbjct  1780  LELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL  1839

Query  1864  IAVPNHLTKQWGDEFYKAYPNANVLVVDNKDITKKERELLFNQIANNNYDAVIIAHTHLE  1923
             IAVPNHLTKQWGDEFYKAYPNANVLVVD+KDIT KERELLFNQIANNNYDAVIIAHTHLE
Sbjct  1840  IAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLE  1899

Query  1924  LLSNPreiieelreeelVNAEKNFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAI  1983
             LLSNPR IIEEL+EEELVNAEKNFERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAI
Sbjct  1900  LLSNPRGIIEELKEEELVNAEKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAI  1959

Query  1984  LEKQGSHIDISQMGIGNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL  2043
             LEKQGSHIDISQMGI+NLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL
Sbjct  1960  LEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL  2019

Query  2044  HQNDKKIMFLTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDT  2103
             HQNDKKIM+LTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDT
Sbjct  2020  HQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDT  2079

Query  2104  SAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRS  2163
             SAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRS
Sbjct  2080  SAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRS  2139

Query  2164  EEVAQFIGVALENGKYNEGSIIDRMQKCEGKKNKKGQDNILSCTTDARKVALDYRLIDPN  2223
             EEVAQFIGVA ENGKYNEGSIIDRMQKCEGKK+KKGQDNILSCTTDARKVALDYRLIDPN
Sbjct  2140  EEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPN  2199

Query  2224  AKVEKEFSKSYAMAKNIYENYLETHATKGTQLGFIGLSTPKTHSQKVSLEALDNAHGIEN  2283
             AKVEKEFSKSYAMA NIYENYLET+ATKGTQLGFIGLSTPKTHSQKVSLEALDNAH  EN
Sbjct  2200  AKVEKEFSKSYAMAENIYENYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETEN  2259

Query  2284  KNPLDEAQELLESLSSYDENGNLIAPSkkelenelkekeakSVNLDEEIAKGCSFDVYSD  2343
             KNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEEIAKGC FDVYSD
Sbjct  2260  KNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSD  2319

Query  2344  VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGKVRVLLGSPAKMGVGTNVQERLV  2403
             VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRG VRVLLGSPAKMGVGTNVQERLV
Sbjct  2320  VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLV  2379

Query  2404  AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK  2463
             AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK
Sbjct  2380  AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK  2439

Query  2464  SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKA  2523
             SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKA
Sbjct  2440  SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKA  2499

Query  2524  FNKENYFNEENLKNNSSKLDYLKQELKDLETLQSSIMIPTHTEIKLYDLKNEESKDYELI  2583
             F+KENYFNEENLKNN+S+ DYLKQELKDLETLQSSI+IPTHTEIKLYDLKNEESKDYELI
Sbjct  2500  FHKENYFNEENLKNNASQWDYLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELI  2559

Query  2584  KVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDC  2643
             KVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDC
Sbjct  2560  KVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDC  2619

Query  2644  KLLEYKGFVVNAYKTKYQVEFSLSPKDNPNIAYSPSNMIYKNDTSQLFSSYNFCAEIKFD  2703
             KLLEYKGFVVNAYKTKYQVEFSLSPKDNPN++YSPSNM+YKNDT+++FSSYNFCAEIKFD
Sbjct  2620  KLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFD  2679

Query  2704  GFLKRLDNAITKLPEKIKELENSIETTKENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL  2763
             GFLKRLDNAITKLPEKIKELENSIETT+ENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL
Sbjct  2680  GFLKRLDNAITKLPEKIKELENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL  2739

Query  2764  IDDLAKMSKNRDYKPVFNPKSKEVLKKMNAEKRASLEDESKEQGVKGNTK  2813
             IDDLAKMSK+RDYKPVFNPKSKEVLK++NAEKRASLE+ES  + +K +++
Sbjct  2740  IDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLENESVTEEIKEQAN  2789

4) HPIN_03820 in NC_017372


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3998 bits (15208),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2577/2810 (92%), Positives = 2699/2810 (97%), Gaps = 37/2810 (1%)

Query  6     NKKKLKELRGQPNLFSILDDGDVINTTHYKQENTNTALEPTIELENGLKSQELALENQQE  65
             +KKK K+   QPNLFSILD+GD+                    +E++ + +E+     QE
Sbjct  15    QKKKAKN--PQPNLFSILDNGDIATNNP---------------IEESDRVNEI-----QE  52

Query  66    PLPYVVKTQINTASMISRNPIEWARYLSFERRVYKDNSKEDVNFFANGEIKESSRVYEAN  125
             PLPYVVKTQINTA MISRNPIEWARYLSFERRV KDNSKEDVNFFANGEIKESSRVYEAN
Sbjct  53    PLPYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEAN  112

Query  126   KEGFERRITKRYDLID--RNREFFSKEIDTITYTNSLEELKEQGLEIQLTHHNETHKKTL  183
              EGFERRITKRYDLID  RNREFFS+EI+ +TYTNSLEELKEQGLEIQLTHHNETHKKTL
Sbjct  113   EEGFERRITKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTL  172

Query  184   ENGNEIAKEYDYLKDIYQEVERTKDNELVREIIPSISSAECFKLYNKMPFESINDENTKL  243
             ENGNEI KEYDYLKDIYQEVERT+D  LVREIIP++SS E FKLYNK+PFESIN+ENTKL
Sbjct  173   ENGNEIVKEYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKL  232

Query  244   NTNDNEEVKKLEFELAKEVHTLILEQQLLSATDYYSWIDKDDNANFAWKMHRLINENKLK  303
             NTNDNEEVKKLEFELAKEVH+LILEQQLLSATDYY+WIDKDDNANFAWKMHRLINENKLK
Sbjct  233   NTNDNEEVKKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLK  292

Query  304   ENHLSADNANKIKHFFFNNGFILGWTKEEQSAIQENRDYSLRSPLLNLEEIAQAKIELQK  363
             ENHLSADNANKIK+FFFNNGFILGWTKEEQSAIQENRDYSL+S LL+LEEIAQAKIELQK
Sbjct  293   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQK  352

Query  364   YYGSVYVNGDGNKRDIKPFKEILRDINNFEKAYKQRYNELVSLNEAIIQAKEGSNERQKS  423
             YY SVYVNGDGNKR+IKPFKEILRD+NNFEKAY+QRYNELVSLNEAIIQAKE+SNERQKS
Sbjct  353   YYESVYVNGDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKS  412

Query  424   SAnnnntinntietntsnniiknndnnnpnLSIADLKLEQQNLGEPNDKERTNRADEPNG  483
             SANNNN INNTIETNTSNNIIKNNDNN+PNLS+ADL LEQQNLGE N+KE+TNRADEPNG
Sbjct  413   SANNNNPINNTIETNTSNNIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNG  472

Query  484   TRAGIPQEIHRRSEHGGQQEGVERSSDEEFSHQDPSLFTEPREQGGTRGVYRSSDQQAVS  543
             TRAGIPQEIHRRSEHG +QEG+ERSSDEE+SHQD+SLF EPREQG TRGVYRSSDQQAVS
Sbjct  473   TRAGIPQEIHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVS  532

Query  544   EKPHRERDRLHEHVFGGNGVSARADSNGESTQASSPASRMENGTRSEEKGDNPSDERGIP  603
              K+HRERDR+HEHV  G+G+SARA++ ++S  ASSPASRMENG+RSEEKGDNP+DERGIP
Sbjct  533   KKSHRERDRIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIP  592

Query  604   QPPQTRSYQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNDRELDR  663
             +PPQ+ S QQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQN+RELD 
Sbjct  593   RPPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDN  652

Query  664   SSDRANENGDRSPRQNGSANQESARSERYGIAQGSSNQSVLPLAQSRLHHAGLITPNGLG  723
             SSDRANENGDRSPRQNGSANQE+AR+ER+GIA  SSNQSVLPLAQSRLHHAGL TPNGLG
Sbjct  653   SSDRANENGDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLG  712

Query  724   NLEQNRDQEGRllsnldnlesllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQL  783
             +LE+NRDQ   LLSNLD+LESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQL
Sbjct  713   SLEENRDQKRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQL  772

Query  784   LKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETANETLNAFNTLDSQAIDLNAISNS  843
             LKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIET+NE+LNAFN+LDSQAIDLNAISNS
Sbjct  773   LKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNS  832

Query  844   VGLNPTQENKITDNSVELNNAqeqttqeqdtqetapttlkqetkeqetpttlAIPLNPKI  903
             +GLNPTQE+KITDNSVELNNAQEQT+QEQDTQ  APTT              AIPLNPKI
Sbjct  833   IGLNPTQESKITDNSVELNNAQEQTAQEQDTQKNAPTTP-------------AIPLNPKI  879

Query  904   DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGGYYATLKEQEILAQFSGWGGL  963
             DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKG+YYATLKEQEILAQFSGWGGL
Sbjct  880   DFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGL  939

Query  964   ESYFKKDQHPEEFKELNALLTKDEFRRAYLSARDAYYTPKLIIDSIYQALDHLGFNNDNY  1023
             ESYFKK Q PEEFKELNALLTKDEFRRAYLSARDAYYTPKL+IDSIYQAL++LGFNNDN 
Sbjct  940   ESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNH  999

Query  1024  QKEIFEPSLGTGKFIAHAPSDKNYRFSGTELDPISASISQFLYPNQVIQNTALENHQFYQ  1083
             QKEIFEPSLGTGKFIAHAPSDKNYRF GTELDPISASISQFLYPNQVIQNTALENHQFYQ
Sbjct  1000  QKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQ  1059

Query  1084  DYDAFVGNPPYGNHKIYSYNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN  1143
             DYDAFVGNPPYGNHKIYS+ DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN
Sbjct  1060  DYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKN  1119

Query  1144  PKMREHIAQNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVEKATNQSFTKAMPYYDKI  1203
             PKMREHIA+NATFLGAIRLPNSVFKATGAEVTSDIVFFKKGV+KATNQSFTKAMPYYDKI
Sbjct  1120  PKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKI  1179

Query  1204  VDSLDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTTNFGYSEQ  1263
             +++LDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGF+QEKLQRWYEKIDT+NFGY EQ
Sbjct  1180  INGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQ  1239

Query  1264  DYKIIKDFMDKVGKNNIHLNEQTLNEYFINHPENILGRLSLEKTRYSFEINGEQIYKYEL  1323
             DY IIKDFMDKVG NNIHLNEQTLNEYFI+HPENILG+LSLEKTRYS E+NGEQIYKYEL
Sbjct  1240  DYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYEL  1299

Query  1324  QALEDESLDLSQALNQAIEKLPKDVYQYHKTTLKTDALIIDANNERYEEVQKLIKNLERG  1383
             QALED SLDLSQALNQAIEKLPK+VYQYHKTTLKTD+LIID+NNERY+EVQKLIKNLERG
Sbjct  1300  QALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERG  1359

Query  1384  ELVKWDDLYCQLEQNNEMGIFLKPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSD  1443
             ELVKWDDLY QLEQNNE GIFL+PTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSD
Sbjct  1360  ELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSD  1419

Query  1444  LELESKRAKLNLVYDGFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKM  1503
             LELE+KRAKLNLVYD FVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+
Sbjct  1420  LELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKI  1479

Query  1504  QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASVNQKGCLDLHFIRDHFTTQSL  1563
             QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIAS+NQKGCLDLHFI+DHFTTQSL
Sbjct  1480  QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSL  1539

Query  1564  ETTIKELLEQKLIYKDHKDNGGYILANDYLSANVKRKLKEVKEAINQGVEGLEANLKDLE  1623
             ETTIKELLEQKLIYKDHKDNGGYILANDYLS+NVKRKLKEVKEAINQGVEGLEAN+KDLE
Sbjct  1540  ETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLE  1599

Query  1624  LIIPKDLKATEIMANINSPWIPTQYLEEFLIELSANHYEKQYGDKMTDYQLGNLKEDIKV  1683
             LIIPKDLKATEIMANINSPWIPTQYLEEFL+ELSANHYEKQYGDKMTDYQLGNLKEDIKV
Sbjct  1600  LIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKV  1659

Query  1684  EHLNGAYEVSIRNNELNELYGIRHKDKPYSYKAPFESLLNKVLNNKDLSVKYAQVDPNDP  1743
             EHLNGAYEVSIR+NELNELYGIRHKD++ SYKAPFESLLNKVLNNKDLSVKYAQVDPNDP
Sbjct  1660  EHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDP  1719

Query  1744  KKEIFIADEEQSNLARQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQ  1803
             KKEIFI+DEEQSNLA+QKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQ
Sbjct  1720  KKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQ  1779

Query  1804  LELEGFNHHISLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL  1863
             LELEGFNH+I LRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL
Sbjct  1780  LELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTL  1839

Query  1864  IAVPNHLTKQWGDEFYKAYPNANVLVVDSKDTTEKERELLFNQIANNNYDAVIIAHTHLE  1923
             IAVPNHLTKQWGDEFYKAYPNANVLVVDSKD TEKERELLFNQIANNNYDAVIIAHTHLE
Sbjct  1840  IAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLE  1899

Query  1924  LLSNPREIIEGLQEEELVNAEKNFERQELSYKNNPREAKKPNERAFKNKLDKIRAKYDAI  1983
             LLSNPR IIE L+EEELVNAEKNFERQEL+Y+NNPRE+KKPNERAFKNKLDKIRAKYDAI
Sbjct  1900  LLSNPRGIIEELKEEELVNAEKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAI  1959

Query  1984  LEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL  2043
             LEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL
Sbjct  1960  LEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYL  2019

Query  2044  HQNDKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDT  2103
             HQNDKKIM+LTGTPIANSLSEMYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDT
Sbjct  2020  HQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDT  2079

Query  2104  SAQSYKMINRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRS  2163
             SAQSYKM+NRFSKFSDVQGLSTMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRS
Sbjct  2080  SAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRS  2139

Query  2164  EEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPN  2223
             EEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPN
Sbjct  2140  EEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPN  2199

Query  2224  AKVEKEFSKSYAMAKNIYENYLETHATKGTQLGFIGLSTPKTHSQKVSLEVLDNAHGIEN  2283
             AKVEKEFSKSYAMA NIYENYLET+ATKGTQLGFIGLSTPKTHSQKVSLE LDNAH  EN
Sbjct  2200  AKVEKEFSKSYAMAENIYENYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETEN  2259

Query  2284  KNPLDEAQELLESLSSYDEKGNLIAPSkkelenelkekeakSVNLDEELAKGCSFDVYSD  2343
             KNPLDEAQELLESLSSYDE+GNLIAPSKKELENELKEKEAKSVNLDEE+AKGC FDVYSD
Sbjct  2260  KNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSD  2319

Query  2344  VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEIRVLLGSPAKMGVGTNVQERLV  2403
             VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGE+RVLLGSPAKMGVGTNVQERLV
Sbjct  2320  VLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLV  2379

Query  2404  AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK  2463
             AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK
Sbjct  2380  AMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETK  2439

Query  2464  SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEESKYKS  2523
             SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EE+KYK+
Sbjct  2440  SKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKA  2499

Query  2524  FNKEHYFNEENLKNNASQWDYLKQELKDLETLQSSVIIPTHTEIKLYDLKNEESKDYELI  2583
             F+KE+YFNEENLKNNASQWDYLKQELKDLETLQSS+IIPTHTEIKLYDLKNEESKDYELI
Sbjct  2500  FHKENYFNEENLKNNASQWDYLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELI  2559

Query  2584  KVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDC  2643
             KVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDC
Sbjct  2560  KVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDC  2619

Query  2644  KLLEYKGFVVNAYKTKYQVEFNLSPKDNPNIAYSPSNMVYKNDTANMFSSYNFCGEIKFD  2703
             KLLEYKGFVVNAYKTKYQVEF+LSPKDNPN++YSPSNMVYKNDTANMFSSYNFC+EIKFD
Sbjct  2620  KLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFD  2679

Query  2704  GFLKRLDNAITKLPEKIKELENSIETTKENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL  2763
             GFLKRLDNAITKLPEKIKELENSIETT+ENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL
Sbjct  2680  GFLKRLDNAITKLPEKIKELENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTL  2739

Query  2764  IDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLVDESKEQGVKGNTK  2813
             IDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASL +ES  + +K +++
Sbjct  2740  IDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLENESVTEEIKEQAN  2789

5) K751_08590 in NC_021218


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3983 bits (15151),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2576/2826 (92%), Positives = 2704/2826 (96%), Gaps = 37/2826 (1%)

Query  6     NKKKLKELREQPNLFSILDDGDVINTTHYKQENTNTTLEPTIELENGLKSQELALENQQE  65
             +KKK K+   QPNLFSILD+GD+                    +E++ + +E+     QE
Sbjct  15    QKKKAKN--PQPNLFSILDNGDIATNNP---------------IEESDRVNEI-----QE  52

Query  66    PLPYVVKTQINTARMISRNPIEWARYLSFEKRIYKDNSKEDVNFFANGEIKESSRVYEAN  125
             PLPYVVKTQINTARMISRNPIEWARYLSFE+R+ KDNSKEDVNFFANGEIKESSRVYEAN
Sbjct  53    PLPYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEAN  112

Query  126   EEGFERRITKRYDLIDTIRNREFFSKEIDTLTYTNSLEELKEQGLEIQLTHHNETHKKTL  185
             EEGFERRITKRYDLIDTIRNREFFS+EI+ LTYTNSLEELKEQGLEIQLTHHNETHKKTL
Sbjct  113   EEGFERRITKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTL  172

Query  186   ENGNEIAKEYDYLKDIYQEVERTKDNELVREIIPSISSAEYFKLYNKPPFEStnnentkl  245
             ENGNEI KEYDYLKDIYQEVERT+D  LVREIIP++SS EYFKLYNK PFES NNENTKL
Sbjct  173   ENGNEIVKEYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKL  232

Query  246   ntndneeVKKLEFELAKEVHALILEQNLLSATDYYSWIDKDDYASFAWKMHRLINEDKLK  305
             NTNDNEEVKKLEFELAKEVHALILEQ+LLSATDYY+WIDKDD A+FAWKMHRLINE+KLK
Sbjct  233   NTNDNEEVKKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLK  292

Query  306   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAMQENRDYSLKSALLSLEEIAQAKIELQK  365
             ENHLSADNANKIKQFFFNNGFILGWTKEEQSA+QENRDYSLKS LLSLEEIAQAKIELQK
Sbjct  293   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQK  352

Query  366   YYESVYVNGDGSKREIKPFKEILRDINNFEKAYKERYNELVSLNEAITQAKegsngqqns  425
             YYESVYVNGDG+KREIKPFKEILRD+NNFEKAY++RYNELVSLNEAI QAKE+SN +Q+S
Sbjct  353   YYESVYVNGDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKS  412

Query  426   nannnntikntietntSignniiqnndnnnpnlsiADLELEQQNLGEQNGKERTNRADEP  485
             +ANNNN I+NTIETNTS      ++N++ N ++  ADLELEQQNLGE+NGKE+TNRADEP
Sbjct  413   SANNNNPINNTIETNTSNNIIKNNDNNHPNLSV--ADLELEQQNLGEKNGKEKTNRADEP  470

Query  486   NRTRAGIPQEIHRRSEHGGLQEGVERSSDEELSHQDSSLFIEPREQGGTRGVYRSSDQQA  545
             N TRAGIPQEIHRRSEHG  QEG+ERSSDEELSHQDSSLFIEPREQG TRGVYRSSDQQA
Sbjct  471   NGTRAGIPQEIHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQA  530

Query  546   VSEKSHRERDRLHEHVSRGDGVSARAD----SNGASNQASRMENGARSEEKGDNPSDERG  601
             VS KSHRERDR+HEHVSRGDG+SARA+    SNGAS+ ASRMENGARSEEKGDNP+DERG
Sbjct  531   VSKKSHRERDRIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERG  590

Query  602   VSQTPQSPSHQQnssrnlglslsrEQPGQTGRLRLFDHGQMGSLFPTDHENQRERNDNEL  661
             +++ PQSPSHQQNSSR+LGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQR +N+ EL
Sbjct  591   IPRPPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNREL  650

Query  662   DRSSDRANENGDKSPRQNGSANQESARSERYGIAQGSSNQSVLPLAQSRLHHAGLGAPNG  721
             D SSDRANENGD+SPRQNGSANQE+AR+ER+GIA  SSNQSVLPLAQSRLHHAGL++PNG
Sbjct  651   DNSSDRANENGDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNG  710

Query  722   LGSLEENRDQERGllsnldhlesllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGT  781
             LGSLEENRDQ RGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVG+
Sbjct  711   LGSLEENRDQKRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGA  770

Query  782   QLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIEIANETLNAFNTLDSQAIDGNAIS  841
             QLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIE +NE+LNAFN+LDSQAID NAIS
Sbjct  771   QLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAIS  830

Query  842   NSVGLNPIQESEIADNSVELNSIKEQTAQEQDTQENAQTTIKQETPTAPTIPLNPKIDFK  901
             NS+GLNP QES I+DNSVELN+ +EQTAQEQDTQ NA        PT+P+IPLNPKIDFK
Sbjct  831   NSIGLNPTQESKITDNSVELNNAQEQTAQEQDTQKNA--------PTTPAIPLNPKIDFK  882

Query  902   LSEEVLINGAKTRYKANIKAIELLKELQAKQEILKGDYYATQEEQEILAQFSGWGGLESY  961
              SEEVLI+GAKTRYKANIKAIELLKELQAKQEILKGDYYAT  EQEILAQFSGWGGLESY
Sbjct  883   PSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESY  942

Query  962   FKKDQRPEEFKELNALLTKDEFRRAYSSTRDAYYTPKLVIDSIYQGLDQLGFNNDNHQKE  1021
             FKK Q PEEFKELNALLTKDEFRRAY S+RDAYYTPKLVIDSIYQ+L+QLGFNNDNHQKE
Sbjct  943   FKKAQCPEEFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKE  1002

Query  1022  IFEPSLGTGKFIAHAPSDKNYRFMGIELDPISANISKFLYPNQVIQNTALENHQFYQEYD  1081
             IFEPSLGTGKFIAHAPSDKNYRFMG ELDPISA+IS+FLYPNQVIQNTALENHQFYQ+YD
Sbjct  1003  IFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYD  1062

Query  1082  AFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNPKM  1141
             AFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPKM
Sbjct  1063  AFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKM  1122

Query  1142  REHIVQNATFLGAIRLPNSVFKATGVEVSSDIVFFKKGVDEATNQSFTKAMPYYDKIIDS  1201
             REHI +NATFLGAIRLPNSVFKATG EV+SDIVFFKKGVD ATNQSFTKAMPYYDKII++
Sbjct  1123  REHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIING  1182

Query  1202  LDDDALFALQNNRFDSFTPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYKEQDYK  1261
             LDDD+LFALQNNRFDSF PSDQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGYKEQDY 
Sbjct  1183  LDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYE  1242

Query  1262  IIKDFIDKVGKNNINLNEQTLNEYFIHHPENILGHLSLEKTRHSFEINGEQIYKYELQAL  1321
             IIKDF+DKVG NNI+LNEQTLNEYFIHHPENILGHLSLEKTR S E+NGEQIYKYELQAL
Sbjct  1243  IIKDFMDKVGENNIHLNEQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQAL  1302

Query  1322  EDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDALIIDANNECYQEIQKLIKNLERGELV  1381
             EDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTD+LIID+NNE YQE+QKLIKNLERGELV
Sbjct  1303  EDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELV  1362

Query  1382  KWDNLYFQLEQNNEIGIFLKPTKINSKVQDSRLKAYFKIKDALNDLTSAELNPLSSDLEL  1441
             KWD+LYFQLEQNNE GIFL+PTKINSK QDSRLKAYFKIKDALNDLTSAELNPLSSDLEL
Sbjct  1363  KWDDLYFQLEQNNERGIFLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLEL  1422

Query  1442  ESKRARLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNI  1501
             E+KRA+LNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNI
Sbjct  1423  ENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNI  1482

Query  1502  EPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIRDHFTTQSLETT  1561
             EPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFI+DHFTTQSLETT
Sbjct  1483  EPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETT  1542

Query  1562  IKELLEQKLIYKDHKDNGDYVLANDYLSANVKRKLKEVKEAINQGVEGLETNVKDLDLVI  1621
             IKELLEQKLIYKDHKDNG+Y+LANDYLS+NVKRKLKEVKEAINQGVEGLE+NVKDL+L+I
Sbjct  1543  IKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELII  1602

Query  1622  PKDLKATEIMANINSPWIPTQYLKEFLVELAANHYEKQYGDKMTDYQLGNLKEDIKVEHL  1681
             PKDLKATEIMANINSPWIPTQYL EFL+EL+ANHYEKQYGDKMTDYQLGNLKEDIKVEHL
Sbjct  1603  PKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHL  1662

Query  1682  SGAYEVFARNNELNELYGIRHKDKAHSYKVPFESLLNKVLNNKDLSVKYAQVDPNDPKKE  1741
             +GAYEV  R+NELNELYGIRHKD+AHSYK PFESLLNKVLNNKDLSVKYAQVDPNDPKKE
Sbjct  1663  NGAYEVSIRSNELNELYGIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKE  1722

Query  1742  IFITDEEQSNLARQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLEL  1801
             IFITDEEQSNLA+QKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQLEL
Sbjct  1723  IFITDEEQSNLAKQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLEL  1782

Query  1802  EGFNHHISLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAV  1861
             EGFNH+I LRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAV
Sbjct  1783  EGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAV  1842

Query  1862  PNHLTKQWGDEFYKAYPNANVLVVDSKDTTEKERELLFNQIANNNYDAVIIAHTHLELLS  1921
             PNHLTKQWGDEFYKAYPNANVLVVDSKD TEKERELLFNQIANNNYDAVIIAHTHLELLS
Sbjct  1843  PNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLS  1902

Query  1922  NPRGIIEGLKEEELVNAEKNFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEK  1981
             NPRGIIE LKEEELVNAEKNFERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAILEK
Sbjct  1903  NPRGIIEELKEEELVNAEKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEK  1962

Query  1982  QGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQN  2041
             QGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQN
Sbjct  1963  QGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQN  2022

Query  2042  DKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQ  2101
             DKKIM+LTGTPIANSLSEMYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQ
Sbjct  2023  DKKIMLLTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQ  2082

Query  2102  SYKMVNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEV  2161
             SYKMVNRFSKFSDVQGLSTMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEV
Sbjct  2083  SYKMVNRFSKFSDVQGLSTMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEV  2142

Query  2162  AQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKV  2221
             AQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKV
Sbjct  2143  AQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKV  2202

Query  2222  EKEFSKSYAMAKNIYENYLETHATKGTQLGFIGLSTPKTHSQKVSLEALDNAHEIENKNP  2281
             EKEFSKSYAMA NIYENYLET+ATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE ENKNP
Sbjct  2203  EKEFSKSYAMAENIYENYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNP  2262

Query  2282  LDEAQELLESLSSYDENGNLIAPSkkelenelkekeakSVNLDEELAKSCKFDVYSDVLR  2341
             LDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEE+AK+C FDVYSDVLR
Sbjct  2263  LDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLR  2322

Query  2342  HLVQMGIPQNEIAFIHDAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQARLVAMH  2401
             HLVQMGIPQNEIAFIHDAKTEEQKQDLFKK+NRGEVRVLLGSPAKMGVGTNVQ RLVAMH
Sbjct  2323  HLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMH  2382

Query  2402  ELDCPWRPDELLQMEGREIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKG  2461
             ELDCPWRPDELLQMEGR IRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKG
Sbjct  2383  ELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKG  2442

Query  2462  IEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKAFNK  2521
             IEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKAF+K
Sbjct  2443  IEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHK  2502

Query  2522  ENYFNEENLKNNSSQWDYLKQELKDLETLQSSVVIPTHTEIKLYDLKNEESKDYELIKVK  2581
             ENYFNEENLKNN+SQWDYLKQELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVK
Sbjct  2503  ENYFNEENLKNNASQWDYLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVK  2562

Query  2582  EVEPLKENASMSEELTHKKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLL  2641
             EVEPLKENASMSEEL+HKKLKEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCKLL
Sbjct  2563  EVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLL  2622

Query  2642  EYKGFVVNAYKTKYQVEFSLSPKDNPNIAYSPSNMVYKNDTGNMFSSYNFCGEIKFDGFL  2701
             EYKGFVVNAYKTKYQVEFSLSPKDNPN++YSPSNMVYKNDT+NMFSSYNFC+EIKFDGFL
Sbjct  2623  EYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFL  2682

Query  2702  KRLDNAITKLPEKIKESENSIKITQENIAKYTRLVEQKPPYPRLEYLQALKWDHKTLIDD  2761
             KRLDNAITKLPEKIKE ENSI  TQENIAKYTRLVEQKP+YPRLEYLQALKWDHKTLIDD
Sbjct  2683  KRLDNAITKLPEKIKELENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDD  2742

Query  2762  LAKMSKDRDYKPVFNPKSQEVLEKMNAEKRASLENESVTEEI-EQANQEAHRPMKKAAND  2820
             LAKMSKDRDYKPVFNPKS+EVL ++NAEKRASLENESVTEEI EQANQEAHRPMKKAAND
Sbjct  2743  LAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAAND  2802

Query  2821  DYDMGM  2826
             DYDMGM
Sbjct  2803  DYDMGM  2808

6) HMPREF0462_1507 in NC_017375


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3981 bits (15144),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2592/2805 (93%), Positives = 2721/2805 (98%), Gaps = 10/2805 (0%)

Query  1     MQKKKAKNPQPNLFSILDNGDIATNNPSEESDKVNETQEPLPYVVKTQINTARMISRNPI  60
             MQKKKAKNPQPNLFSILDNGDIATNNP EESD+VNE QEPLPYVVKTQINTARMISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFERRVHKDSSKEDVNFFANGEIKESSRVYEANKEGFERRITKRYDLIDTIRNK  120
             EWARYLSFERRVHKD+SKEDVNFFANGEIKESSRVYEAN EGFERRITKRYDLIDTIRN+
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFFSKEIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIAKEYDYLKDIYQEVE  180
             EFFS+EIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEI KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RTKDNELVREIIPSISSAEYFKLYDKLPFESInnentklntndneeVKKLEFELAKEVHT  240
             RT+D  LVREIIP++SS EYFKLY+KLPFESINNENTKLNTNDNEEVKKLEFELAKEVH+
Sbjct  194   RTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA  253

Query  241   LILEQQLLSATNYYSWIDKDDYASFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  300
             LILEQQLLSAT+YY+WIDKDD A+FAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF
Sbjct  254   LILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  313

Query  301   ILGWTKEEQSAIQENRDYSLRSALLSLEEIAQAKIELQKYYESVYVNGDGSKREIKPFKE  360
             ILGWTKEEQSAIQENRDYSL+S LLSLEEIAQAKIELQKYYESVYVNGDG+KREIKPFKE
Sbjct  314   ILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKE  373

Query  361   ILRDINNFEKAYKECYSELVSLNEAIIQAKERsngqqnsnannnntikntietntsignn  420
             ILRD+NNFEKAY++ Y+ELVSLNEAIIQAKE  ++++  +++ NN        +T+ +NN
Sbjct  374   ILRDMNNFEKAYQQRYNELVSLNEAIIQAKE--SSNERQKSSANNNNPINNTIETNTSNN  431

Query  421   iiqnndnnnpnlsiADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGLQ  480
             II+NNDNN+PNLS+ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG  Q
Sbjct  432   IIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQ  491

Query  481   EGVERSSDEELLHQDPSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDRLHEHVSRGDG  540
             EG+ERSSDEEL HQD+SLFIEPREQG TRGVYRSSDQQAVS KSHRERDR+HEHVSRGDG
Sbjct  492   EGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDG  551

Query  541   ISARAEARADSNGTSSQASRMENGARSEEKGDNPSDERGVSQTPQSPSHQQnssrnlgls  600
             ISARAEARA+SNG+SS ASRMENGARSEEKGDNP+DERG+++ PQSPSHQQNSSR+LGLS
Sbjct  552   ISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLS  611

Query  601   lsrEQPGQTGRLRLFDHGQMGSLFPTDHENQRERNDNELDRSSDRANENGDKSPRQNGST  660
             LSREQPGQTGRLRLFDHGQMGSLFPTDHENQR +N+ ELD SSDRANENGD+SPRQNGS+
Sbjct  612   LSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSA  671

Query  661   NQESTRSERYGIAQGSSNQSVLPLAQSRLHHAGLGTPNGLGNLEENRDQKRGllsnldhl  720
             NQE++R+ER+GIA  SSNQSVLPLAQSRLHHAGL+TPNGLG+LEENRDQKRGLLSNLDHL
Sbjct  672   NQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHL  731

Query  721   esllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGTQLLKDPTTKIFYDKFQLKISP  780
             ESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVG+QLLKDPTTKIFYDKFQLKISP
Sbjct  732   ESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISP  791

Query  781   KKVLEILENRIKKSIETTNETLNAFNALDSQAIDGNAISNSVGLNPTQENEIAENSVELN  840
             KKVLEILENR+KKSIETTNE+LNAFNALDSQAID NAISNS+GLNPTQE+ I++NSVELN
Sbjct  792   KKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELN  851

Query  841   SVqeqtaqeqdtqenaqttIKQETPTAPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI  900
             + QEQTAQEQD         ++++PT+PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI
Sbjct  852   NAQEQTAQEQD--------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI  903

Query  901   ELLKELQAKQEILKGDYYATQEEQEILSQFSGWGGLESYFKKDQRPEEFKELNALLTKDE  960
             ELLKELQAKQEILKGDYYAT  EQEIL+QFSGWGGLESYFKK Q PEEFKELNALLTKDE
Sbjct  904   ELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDE  963

Query  961   FRRAYSSTRDAYYTPKLVIDSIYHGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY  1020
             FRRAY S+RDAYYTPKLVIDSIY++L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY
Sbjct  964   FRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY  1023

Query  1021  RFMGTELDPISANISKFLYPNQVIQNTALENHQFYQEYDAFVGNPPYGNHKIYSSNDKEL  1080
             RFMGTELDPISA+IS+FLYPNQVIQNTALENHQFYQ+YDAFVGNPPYGNHKIYS  DKEL
Sbjct  1024  RFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKEL  1083

Query  1081  SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDSKNPKMREHIAQNATFLGAIRLPNSVF  1140
             SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPKMREHIA+NATFLGAIRLPNSVF
Sbjct  1084  SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVF  1143

Query  1141  KATGAEVSSDIVFFKKGVDEATNQSFTKAMPYYDKIIDSLDDDTLFALQNNRFDSFIPSD  1200
             KATGAEV+SDIVFFKKGVD ATNQSFTKAMPYYDKII++LDDDTLFALQNNRFDSFIPSD
Sbjct  1144  KATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSD  1203

Query  1201  QLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYKEQDYKIIKDFIDKVGENNINLNEQTL  1260
             QLKIVNAIASHFGF+QEKLQRWYEKIDTANFGYKEQDY IIKDF+DKVGENNI+LNEQTL
Sbjct  1204  QLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTL  1263

Query  1261  NEYFIHHPENILGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALNQAIEKLPKG  1320
             NEYFIHHPENILGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQALNQAIEKLPKG
Sbjct  1264  NEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKG  1323

Query  1321  VYQYHKTTLKTDALIIDANNERHEEVQKLIKNLERGELVKWDNLYFQLEQNNEIGIFLKP  1380
             VYQYHKTTLKTD+LIID+NNER +EVQKLIKNLERGELVKWD+LYFQLEQNNE GIFL+P
Sbjct  1324  VYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRP  1383

Query  1381  TKTNSKVQDSRLKAYFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYL  1440
             TK NSK QDSRLKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYL
Sbjct  1384  TKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYL  1443

Query  1441  NENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPK  1500
             NENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPK
Sbjct  1444  NENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPK  1503

Query  1501  KELIITNAKEALIASINQKGGLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDNGGYV  1560
             KELIITNAKEALIASINQKG LDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKDNGGY+
Sbjct  1504  KELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYI  1563

Query  1561  LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANTNSPWIPTQ  1620
             LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMAN NSPWIPTQ
Sbjct  1564  LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQ  1623

Query  1621  YLEEFLIELAANHYEKQYGDKMTDYQLGNLKEDIKVEHLSGAYEVFARNNELNELYGIRH  1680
             YLEEFL+EL+ANHYEKQYGDKMTDYQLGNLKEDIKVEHL+GAYEV  R+NELNELYGIRH
Sbjct  1624  YLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRH  1683

Query  1681  KDKAHSYKVPFESLLNKILNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKE  1740
             KD+AHSYK PFESLLNK+LNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKE
Sbjct  1684  KDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKE  1743

Query  1741  AFKDWIYKDYSRRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTI  1800
             AFKDWIYKDY+RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTI
Sbjct  1744  AFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTI  1803

Query  1801  QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV  1860
             QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV
Sbjct  1804  QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV  1863

Query  1861  LVDDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknl  1920
             LV DSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKN+
Sbjct  1864  LVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNF  1923

Query  1921  eRQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH  1980
             ERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH
Sbjct  1924  ERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH  1983

Query  1981  LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMYH  2040
             LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSEMYH
Sbjct  1984  LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYH  2043

Query  2041  LQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSAMY  2100
             LQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS+MY
Sbjct  2044  LQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMY  2103

Query  2101  RAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVALENGKYNEGSIIDR  2160
             RAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVA ENGKYNEGSIIDR
Sbjct  2104  RAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDR  2163

Query  2161  MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLET  2220
             MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLET
Sbjct  2164  MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLET  2223

Query  2221  NATKGTQLGFIGLSTPKTHSQKVSLEAPDNAHEIENKNPLDEAQELLESLSSYDENGNLI  2280
             NATKGTQLGFIGLSTPKTHSQKVSLEA DNAHE ENKNPLDEAQELLESLSSYDENGNLI
Sbjct  2224  NATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLI  2283

Query  2281  APSkkelenelkekeakSVNLDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTE  2340
             APSKKELENELKEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTE
Sbjct  2284  APSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTE  2343

Query  2341  EQKQDLFKKLNRGEVRVLLGSLAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ  2400
             EQKQDLFKKLNRGEVRVLLGS AKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ
Sbjct  2344  EQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ  2403

Query  2401  GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG  2460
             GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG
Sbjct  2404  GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG  2463

Query  2461  SSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKSNSSRLDYLKQ  2520
             SSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLK+N+S+ DYLKQ
Sbjct  2464  SSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQ  2523

Query  2521  ELKDLETLSSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLK  2580
             ELKDLETL SSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLK
Sbjct  2524  ELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLK  2583

Query  2581  EQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKFLEYKGFVVNAYKTKYQVEFSLS  2640
             EQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCK+LEYKGFVVNAYKTKYQVEFSLS
Sbjct  2584  EQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLS  2643

Query  2641  PKDNPNVAYSPSNMVYKNDTANMFSPYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSL  2700
             PKDNPNV+YSPSNMVYKNDTANMFS+YNFC+EIKFDGFLKRLDNAITKLPEKIKELENS+
Sbjct  2644  PKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSI  2703

Query  2701  KTTQENIAKYTRLVEQKPPYSRLEYLQALKWDHKTLIDDLAKMSKNRDYKPVFNPKSQEV  2760
              TTQENIAKYTRLVEQKP+Y+RLEYLQALKWDHKTLIDDLAKMSK+RDYKPVFNPKS+EV
Sbjct  2704  ETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEV  2763

Query  2761  LEKMNAEKRASLENESVTEEIKEQANQEAHRPMKKASGGDYDMGM  2805
             L ++NAEKRASLENESVTEEIKEQANQEAHRPMKKA+ +DYDMGM
Sbjct  2764  LKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

7) HPSNT_00360 in NC_017376


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3968 bits (15095),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2615/2809 (94%), Positives = 2730/2809 (98%), Gaps = 15/2809 (0%)

Query  1     MQKKKVKNPQPNLFSILDNGDIATNNPAEKSDKVNEIQEPLHYVVKTQINTARMISRNPI  60
             MQKKK KNPQPNLFSILDNGDIATNNP E SD+VNEIQEPL YVVKTQINTARMISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFEKRIYKDNSKEDVNFFANGEIKESSRVYEANKEGFERRITKRYDLIDTTRNR  120
             EWARYLSFE+R+ KDNSKEDVNFFANGEIKESSRVYEAN EGFERRITKRYDLIDT RNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFFSKEIDILTYTNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIYQEVE  180
             EFFS+EI+ILTYTNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RTKDGELIREIIPSISSAEYFKLYDKLPFESInnentklntndneeVKKLEFELAKEVHA  240
             RT+DG L+REIIP++SS EYFKLY+KLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA
Sbjct  194   RTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA  253

Query  241   LILEQQLLSATNYYSWIDKDDYASFAWKMHRLINENKLKENHLSTDNANKIKQFFFNNGF  300
             LILEQQLLSAT+YY+WIDKDD A+FAWKMHRLINENKLKENHLS+DNANKIKQFFFNNGF
Sbjct  254   LILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  313

Query  301   ILGWTKEEQSAMQENRDYSLKSALLSLEEIAQAKIELQKYYESVYINGDGRKREIKPFKE  360
             ILGWTKEEQSA+QENRDYSLKS LLSLEEIAQAKIELQKYYESVY+NGDG KREIKPFKE
Sbjct  314   ILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKE  373

Query  361   ILRDINNFEKAYKERYSKLVSLNAAIIQAKESsnerqksnannnnaikntietntsnnii  420
             ILRD+NNFEKAY++RY+ LVSLN AIIQAKESSNERQKS+ANNNN+I+NTIETNTSNNII
Sbjct  374   ILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNII  433

Query  421   qnndnnhpnLSVADLELEQQNLGEQNDKERTNRADEPNRTGAGIPQEIHRRSEHGGQQEG  480
             +NNDNNHPNLSVADLELEQQNLGE+N+KE+TNRADEPN T AGIPQEIHRRSEHG +QEG
Sbjct  434   KNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEG  493

Query  481   VERSSDEELSHQDPSLFIEPREQGGTRGIYRSSDQQAVSEKSHRERDRIHEHVFRGDGVS  540
             +ERSSDEELSHQD+SLFIEPREQG TRG+YRSSDQQAVS KSHRERDRIHEHV RGDG+S
Sbjct  494   MERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGIS  553

Query  541   ARADARADSNGASSPASRMENGTRSEEKGDNPNDERGIpqppqspshqqnssRDLGLSLS  600
             ARA+ARA+SNGASSPASRMENG+RSEEKGDNP DERGIP+PPQSPSHQQNSSRDLGLSLS
Sbjct  554   ARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLS  613

Query  601   REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDRSSDRANENGDKSPRQNGSANQ  660
             REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELD SSDRANENGD+SPRQNGSANQ
Sbjct  614   REQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQ  673

Query  661   ESARSERYGIAQGSSNQSVLPLAQSRLHHAGLSAPNGLGNLEENRDQKRGllsnldhles  720
             E+AR+ER+GIA  SSNQSVLPLAQSRLHHAGLS+PNGLG+LEENRDQKRGLLSNLDHLES
Sbjct  674   EGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLES  733

Query  721   llnAIRNNTIASEPDFRFRLLEAIQNNEPLKDSIVGAQLLKDPTTKIFYDKFQLKISPKK  780
             LLNAIRNNTIASEPDFR RLLEAIQNNEPLKDS+VGAQLLKDPTTKIFYDKFQLKISPKK
Sbjct  734   LLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKK  793

Query  781   VLEILENRLKKSIETANETLNAFNAPDSQAIDLNAISNSVGLNPTQESKITDNSVELnna  840
             VLEILENRLKKSIET+NE+LNAFNA DSQAIDLNAISNS+GLNPTQESKITDNSVELNNA
Sbjct  794   VLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNA  853

Query  841   qeqtaqeqdtqenaqttlkqetkeqetptapaIPLNPKIDFKPSEEVLIKGSKTRYKANI  900
             QEQTAQEQDTQ NA TT               IPLNPKIDFKPSEEVLIKG+KTRYKANI
Sbjct  854   QEQTAQEQDTQKNAPTTPA-------------IPLNPKIDFKPSEEVLIKGAKTRYKANI  900

Query  901   KAIELLKELQAKQEILKGGYYATLKEQEILAQFSGWGGLESYFKKDQHPEEFKELNALLT  960
             KAIELLKELQAKQEILKG+YYATLKEQEILAQFSGWGGLESYFKK Q PEEFKELNALLT
Sbjct  901   KAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLT  960

Query  961   KDEFRRAYSSTRDAYYTPKLIIDSIYQALDHLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020
             KDEFRRAY S+RDAYYTPKL+IDSIYQAL++LGFNNDNHQKEIFEPSLGTGKFIAHAPSD
Sbjct  961   KDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSD  1020

Query  1021  KNHRFSGTELDPISANLSKFLYPNQVIQNTALENHSFYQEYDAFVGNPPYGNHKIYSSND  1080
             KN RF GTELDPISA++S+FLYPNQVIQNTALENH FYQ+YDAFVGNPPYGNHKIYS  D
Sbjct  1021  KNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYD  1080

Query  1081  KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAQNATFLGAIRLPN  1140
             KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIA+NATFLGAIRLPN
Sbjct  1081  KELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPN  1140

Query  1141  SVFKATGAEVTSDIVFFKKGVDEAINQSFTKAMPYYDKIINSLDDDTLFALQNNRFDSFI  1200
             SVFKATGAEVTSDIVFFKKGVD A NQSFTKAMPYYDKIIN+LDDDTLFALQNNRFDSFI
Sbjct  1141  SVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFI  1200

Query  1201  PSDQLKIVNAVASHFGFKQEKLQRWYEEIDTANFGYREQDYEIIKDFIDKVGENNINLNE  1260
             PSDQLKIVNA+ASHFGF+QEKLQRWYE IDTANFGY+EQDYEIIKDF+DKVGENNI+LNE
Sbjct  1201  PSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNE  1260

Query  1261  QTLNEYFIHHPENILGHLSLEKTRYSFETNGERIYKYELQALEDKSLNLSQALNQAIEKL  1320
             QTLNEYFIHHPENILGHLSLEKTRYS E NGE+IYKYELQALEDKSL+LSQALNQAIEKL
Sbjct  1261  QTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKL  1320

Query  1321  PKGVYQYHKTTLKTDALIIDANNERYEEVQKLIKNLERGELVKWDNLYFQLKQNNEMGVF  1380
             PKGVYQYHKTTLKTD+LIID+NNERY+EVQKLIKNLERGELVKWD+LYFQL QNNE G+F
Sbjct  1321  PKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIF  1380

Query  1381  LKPTKTNSKAQDSRLNAYFKIKDALNDLTSAELNPLSSDLELESKRAKLNLVYDEFVNKF  1440
             L+PTK NSKAQDSRL+AYFKIKDALNDLTSAELNPLSSDLELE+KRAKLNLVYDEFV+KF
Sbjct  1381  LRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKF  1440

Query  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTL  1500
             GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTL
Sbjct  1441  GYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTL  1500

Query  1501  NPKKELIITNAKEALIASVNQKGCLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDNG  1560
             NPKKELIITNAKEALIAS+NQKGCLDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKDNG
Sbjct  1501  NPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNG  1560

Query  1561  GYILANDYLSGNVKRKLKEVKKAINQGVEGLETNVKDLELIIPKDLKATEIMANINSPWI  1620
             GYILANDYLSGNVKRKLKEVK AINQGVEGLE+NVKDLELIIPKDLKATEIMANINSPWI
Sbjct  1561  GYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWI  1620

Query  1621  PTQYLEEFLTELAANHYEKQYGGKMTDYQLGNLKEDIKIEHLSGAYEVFARNNELNELYG  1680
             PTQYLEEFL EL+ANHYEKQYG+KMTDYQLGNLKEDIK+EHL+GAYEV  R+NELNELYG
Sbjct  1621  PTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYG  1680

Query  1681  IRHKDRAHSYKVPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFIVDEEQSNLARQKAEE  1740
             IRHKDRAHSYK PFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFI DEEQSNLA+QKAEE
Sbjct  1681  IRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEE  1740

Query  1741  LKEAFKDWIYKDYTRRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIF  1800
             LKEAFKDWIYKDY+RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIF
Sbjct  1741  LKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIF  1800

Query  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTNQWGDEFYKAYPN  1860
             RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLT+QWGDEFYKAYPN
Sbjct  1801  RTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPN  1860

Query  1861  ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnae  1920
             ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAE
Sbjct  1861  ANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAE  1920

Query  1921  knFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD  1980
             KNFERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD
Sbjct  1921  KNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVD  1980

Query  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSE  2040
             EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSE
Sbjct  1981  EAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSE  2040

Query  2041  MYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100
             MYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS
Sbjct  2041  MYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLS  2100

Query  2101  TMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160
             TMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI
Sbjct  2101  TMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSI  2160

Query  2161  IDRMQKCEGKKSQKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY  2220
             IDRMQKCEGKKS+KGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY
Sbjct  2161  IDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENY  2220

Query  2221  LETHATKGTQLGFIGLSTPKTHSQKVSLEALDNAHERGENKNPLDEAQELLESLSSYDEN  2280
             LET+ATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE  ENKNPLDEAQELLESLSSYDEN
Sbjct  2221  LETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE-TENKNPLDEAQELLESLSSYDEN  2279

Query  2281  GNLIAPSkkelenelkekeakSVNLDEELAKGCSFDVYSDVLRHLVQMGIPQNEIAFIHD  2340
             GNLIAPSKKELENELKEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHD
Sbjct  2280  GNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHD  2339

Query  2341  AKTEEQKQDLFKKLNRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2400
             AKTEEQKQDLFKKLNRG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR
Sbjct  2340  AKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2399

Query  2401  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED  2460
             GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED
Sbjct  2400  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED  2459

Query  2461  FNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKHKAFNKENYFNEENLKNNSSKLD  2520
             FNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EEAK KAF+KENYFNEENLKNN+S+ D
Sbjct  2460  FNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWD  2519

Query  2521  YLKQELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENVSMSEELAH  2580
             YLKQELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKEN SMSEELAH
Sbjct  2520  YLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAH  2579

Query  2581  KKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDYKLLEYKGFVVNAYKTKYQVE  2640
             KKLKEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERD KLLEYKGFVVNAYKTKYQVE
Sbjct  2580  KKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVE  2639

Query  2641  FSLSPKDNPNIAYSPSNMVYKNDTSQLFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKEL  2700
             FSLSPKDNPN++YSPSNMVYKNDT+++FSSYNFC+EIKFDGFLKRLDNAITKLPEKIKEL
Sbjct  2640  FSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKEL  2699

Query  2701  ENSLETTQENIAKYTRLVEQKPSYPRLEYLQTLKWDHKTLIDDLAKMGKDRDYKPVFNPK  2760
             ENS+ETTQENIAKYTRLVEQKPSYPRLEYLQ+LKWDHKTLIDDLAKM+KDRDYKPVFNPK
Sbjct  2700  ENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPK  2759

Query  2761  SKEVLEKMNAEKRASLENENVTEEI-EQANQEAHRPMKKAANGDYGMGM  2808
             SKEVL ++NAEKRASLENE+VTEEI EQANQEAHRPMKKAAN+DY+MGM
Sbjct  2760  SKEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

8) HPSH_04510 in NC_010698


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3962 bits (15070),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2566/2805 (92%), Positives = 2722/2805 (98%), Gaps = 12/2805 (0%)

Query  1     MQKKKAKNPQPNLFSILDNSDIATNNLAEESDKVNETQEPLPYVVKTQINTARMISRNPI  60
             MQKKKAKNPQPNLFSILDN+DIATNN  EESD+VNE QEPLPYVVKTQINTARMISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFERRVHKDNSREDVNFFANGEIKESSRVYEANEKGFERRITKKYDLID--RNK  118
             EWARYLSFERRVHKDNS+EDVNFFANGEIKESSRVYEANE GFERRITK+YDLID  RN+
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  119   EFFSKEIDILTYKNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIYHEVE  178
             EFFS+EI+ILTY NSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIY+EVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  179   RTKDGELVREVIPSISSAEYFKLYNKLPFESInnentqlntnnneeVKKLEFELAKEVHV  238
             RT+DG LVRE+IP++SS EYFKLYNKLPFESINNENT+LNTN+NEEVKKLEFELAKEVH 
Sbjct  194   RTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA  253

Query  239   LILEQKLLSATDYYSWIDKDDYASFDWKMHRLINEDKLKENHLITDNANKIKRFFFNNDF  298
             LILEQ+LLSATDYY+WIDKDD A+F WKMHRLINE+KLKENHL +DNANKIK+FFFNN+F
Sbjct  254   LILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  313

Query  299   ILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQEYYESVYVNGDGSKREIKPFKE  358
             ILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQ YYESVYVNGDG+KREIKPFKE
Sbjct  314   ILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKE  373

Query  359   ILRDINNFEKAYKERYNELVSLNEAIIQAKEGsneqqnsnannnntikntietntSignn  418
             ILRD+NNFEKAY++RYNELVSLNEAIIQAKE+SNE+Q+S+ANNNN I+NTIETNTS    
Sbjct  374   ILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNII  433

Query  419   iiqnndnnnpnlsiADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGQQ  478
               ++N++ N ++  ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG +Q
Sbjct  434   KNNDNNHPNLSV--ADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQ  491

Query  479   EGVERSSDEELLHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDKLHEHVSRGDG  538
             EG+ERSSDEEL HQDSSLFIEPREQG TRGVYRSSDQQAVS KSHRERD++HEHVSRGDG
Sbjct  492   EGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDG  551

Query  539   VSARADTRADSNGASSQASRMENGARSEEKGDNPSDERGVSPTPQSPSHQQNSSRDLGLS  598
             +SARA++RA+SNGASS ASRMENGARSEEKGDNP+DERG++  PQSPSHQQNSSRDLGLS
Sbjct  552   ISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLS  611

Query  599   LSREQPGQTGRLRLFNHGQMGSLFPTDHENQRSKNDNELDRSSNRTNENGDKSPRQNGSA  658
             LSREQPGQTGRLRLF+HGQMGSLFPTDHENQRS+N+ ELD SS+R+NENGD+SPRQNGSA
Sbjct  612   LSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSA  671

Query  659   NQESARSERYGIAQGSSSQSVLPLAQSRLHHAGLSAPNGLGNLEEDRDQERGllsnldhl  718
             NQE+AR+ER+GIA  SS+QSVLPLAQSRLHHAGLS+PNGLG+LEE+RDQ RGLLSNLDHL
Sbjct  672   NQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHL  731

Query  719   esllnAIRNNTIASEPDFRTRLLEAIQNNEPLKDSIVGMQLLKDPTTKIFYDKFQLKISP  778
             ESLLNAIRNNTIASEPDFR+RLLEAIQNNEPLKDS+VG QLLKDPTTKIFYDKFQLKISP
Sbjct  732   ESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISP  791

Query  779   KKVLEILENRIKKSIETANETLNAFNALDSQAIDGNAISNSVGLNPTQESGITDNSVELn  838
             KKVLEILENR+KKSIET+NE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVELN
Sbjct  792   KKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELN  851

Query  839   naqeqtaqeqdtqenaqttIKQETPTAPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI  898
             NAQEQTAQEQD         ++++PT+PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI
Sbjct  852   NAQEQTAQEQD--------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAI  903

Query  899   ELLKELQAKQEILKGDYYATQEEQKILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDE  958
             ELLKELQAKQEILKGDYYAT  EQ ILAQFSGWGGLESYFKK Q PEEFKELNALLTKDE
Sbjct  904   ELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDE  963

Query  959   FRRAYSSTRDAYYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY  1018
             FRRAY S+RDAYYTPKLVIDSIYQ+L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY
Sbjct  964   FRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNY  1023

Query  1019  RFMGTELDPISANISKFLYPNQVINNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKEL  1078
             RFMGTELDPISA+IS+FLYPNQVI+NTALENHQFYQ+YDAFVGNPPYG+HKIYS  DKEL
Sbjct  1024  RFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKEL  1083

Query  1079  SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDSKNPKMREHIAQNTTFLGAIRLPNSVF  1138
             SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPKMREHIA+N+TFLGAIRLPNSVF
Sbjct  1084  SNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVF  1143

Query  1139  KATGAEVSSDIVFFKKCVDEATNQSFTKAMPYYDKIIDSLDNDTLFALQNNRFDSFTPSD  1198
             KATGAEV+SDIVFFKK VD ATNQSFTKAMPYYDKII++LD+DTLFALQNNRFDSF PSD
Sbjct  1144  KATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSD  1203

Query  1199  QLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINLNEQTL  1258
             QLKIVNAIASHFGF+QEKLQRWYEKIDTANFGY+EQDY IIK+F+DKVGENNI+LNEQTL
Sbjct  1204  QLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTL  1263

Query  1259  NEYFIHHPENILGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALNQAIEKLPKD  1318
             NEYFIHHPENILGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQALNQAIEKLPK+
Sbjct  1264  NEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKG  1323

Query  1319  VYHYHKTTLKTDALIIDANNERYQEVQKLIKNLERGELVKWDNLYFQLEQNNERGIFLKP  1378
             VY+YHKTTLKTD+LIID+NNERYQEVQKLIKNLERGELVKWD+LYFQLEQNNERGIFL+P
Sbjct  1324  VYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRP  1383

Query  1379  TKINSKVQDSRLKAYFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYL  1438
             TKINSK QDSRLKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYL
Sbjct  1384  TKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYL  1443

Query  1439  NENKNRKDIKQNLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPK  1498
             NENKNRKDIKQ+LYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPK
Sbjct  1444  NENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPK  1503

Query  1499  KELIITNAKEALIASINQKGGLNLHFIRDHFATQSLETTIKELLEQKLIYKDHKDNGDYV  1558
             KELIITNAKEALIASINQKG L+LHFI+DHF+TQSLETTIKELLEQKLIYKDHKDNG+Y+
Sbjct  1504  KELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYI  1563

Query  1559  LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQ  1618
             LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQ
Sbjct  1564  LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQ  1623

Query  1619  YLEEFLIELAANHYEKQYGDKMTDYQLGNLKEGIKVEHLSGAYEVLVRNNELNELYGIRH  1678
             YLEEFL+EL+ANHYEKQYGDKMTDYQLGNLKE+IKVEHL+GAYEV +R+NELNELYGIRH
Sbjct  1624  YLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRH  1683

Query  1679  KDKPHSYKAPFESLLIKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKE  1738
             KD++HSYKAPFESLL KVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKE
Sbjct  1684  KDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKE  1743

Query  1739  AFKDWIYKDYTRRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTI  1798
             AFKDWIYKDY+RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTI
Sbjct  1744  AFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTI  1803

Query  1799  QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV  1858
             QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV
Sbjct  1804  QDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANV  1863

Query  1859  LVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknF  1918
             LVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNF
Sbjct  1864  LVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNF  1923

Query  1919  ERQELAYKNNPRETKKPNERAFKSKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH  1978
             ERQELAY+NNPRETKKPNERAFK+KLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH
Sbjct  1924  ERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAH  1983

Query  1979  LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNNKKIMFLTGTPIANSLSEMYH  2038
             LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQN+KKIM+LTGTPIANSLSEMYH
Sbjct  1984  LFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYH  2043

Query  2039  LQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMY  2098
             LQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMY
Sbjct  2044  LQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMY  2103

Query  2099  RAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVAGENGKYNEGSIIDR  2158
             RAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVA+ENGKYNEGSIIDR
Sbjct  2104  RAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDR  2163

Query  2159  MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLET  2218
             MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLET
Sbjct  2164  MQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLET  2223

Query  2219  NATKGTQLGFIGLSTPKTHSQKVSLEALDNTHEIENKNPLDEAQELLESLSSYDENGNLI  2278
             NATKGTQLGFIGLSTPKTHSQKVSLEALDN+HE ENKNPLDEAQELLESLSSYDENGNLI
Sbjct  2224  NATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLI  2283

Query  2279  APSkkelenelkekeakSVNLDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTE  2338
             APSKKELENELKEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTE
Sbjct  2284  APSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTE  2343

Query  2339  EQKQDLFKKINRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ  2398
             EQKQDLFKK+NRG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ
Sbjct  2344  EQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQ  2403

Query  2399  GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG  2458
             GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG
Sbjct  2404  GNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMG  2463

Query  2459  SSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKNNSSKLGYLKQ  2518
             SSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLKNN+S+ +YLKQ
Sbjct  2464  SSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQ  2523

Query  2519  ELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLK  2578
             ELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLK
Sbjct  2524  ELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLK  2583

Query  2579  EQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLN  2638
             EQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL+
Sbjct  2584  EQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLS  2643

Query  2639  PKDNPNIAYSPSNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSI  2698
             PKDNPN++YSPSNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSI
Sbjct  2644  PKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSI  2703

Query  2699  KITQENIAKYTRLVEQKPPYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEV  2758
               TQENIAKYTRLVEQKP+YPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS+EV
Sbjct  2704  ETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEV  2763

Query  2759  LEKMNAEKRASLENEGVTEEIKEQAKEEVHRPMKKVSSGDYDMGM  2803
             L ++NAEKRASLENE+VTEEIKEQA++E HRPMKK +++DYDMGM
Sbjct  2764  LKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

9) HPSA_07665 in NC_017361


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3936 bits (14973),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2552/2806 (91%), Positives = 2690/2806 (96%), Gaps = 15/2806 (0%)

Query  1     MQKKKAKNPQPNLFSILDNGGIAISNPAEESDKVNAIQDPLHYVVKTQINTASMISRNPI  60
             MQKKKAKNPQPNLFSILDNG+IA +NP EESD+VN IQ+PL YVVKTQINTA MISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFEKRVYKDNSKEDVKFFANGGIKESSHVYEANKEGFERCITKRYDLIDTIRNR  120
             EWARYLSFE+RV KDNSKEDV+FFANG IKESS+VYEAN EGFER ITKRYDLIDTIRNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFHSRETEILTHTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIIKEYDYLKDIYQEVE  180
             EF SRE EILT TNSLEELKEQGLEIQLTHHNETHKKTLENGNEI+KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RETRNYGVVREIVPSMSSDEHFKLYNKLPFESInnentklntnaneeVKKLEFELAKEVH  240
             R T++  +VREI+P++SSDE FKLYNKLPFESINNENTKLNTN NEEVKKLEFELAKEVH
Sbjct  194   R-TQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVH  252

Query  241   ALILEQQLLSATNYYSWIDKDDYASFAWKIHRLINENRLKENHLSADNANKIKQFFFNNG  300
             ALILEQQLLSAT+YY+WIDKDD A+FAWK+HRLINEN+LKENHLSADNANKIKQFFFNNG
Sbjct  253   ALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNG  312

Query  301   FILGWTKEEQSAIQENRDYSLRSALLSLEEIAQAKIELQKYYESVYLNGDGNKREIKPFK  360
             FILGWTKEEQSAIQENRDYSL+S LLSLEEIAQAKIELQKYYESVY+NGDGNKREIKPFK
Sbjct  313   FILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFK  372

Query  361   EILRDINNFEKAYKERYNELVSLNEAIIQAKEssnerqnsnannnntinntikhntsiGn  420
             EILRD+NNFEKAY++RYNELVSLNEAIIQAKESSNERQ+S+ANNNN INNTI  NT  +N
Sbjct  373   EILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNT--SN  430

Query  421   nivqnndnnhlnLSMVDLELEQQNLGEPNGKERTNRADEPSRARAGIPQEIHRRSEHGGQ  480
             NI++NNDNNH NLS+ DLELEQQNLGE NGKE+TNRADEP+ +RAGIPQEIHRRSEHG +
Sbjct  431   NIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGER  490

Query  481   QERVERSSDEEFSHQDPSLFIEPREQRETRGIYRSSDQQAVSEKPHRERDRLHEHVSRGD  540
             QE +ERSSDEE+SHQD+SLFIEPREQ  TRG+YRSSDQQAVS K+HRERDR+HEHVSRGD
Sbjct  491   QEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGD  550

Query  541   GVSARTD----SNGASSQASRMENGARSEEKGDNPHNERGVSQTPQSPSHQQNSSRDLGL  596
             G+SAR++    SNGASS ASRMENGARSEEKGDNP +ERG+++ PQSPSHQQNSSRDLGL
Sbjct  551   GISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGL  610

Query  597   SLSREQPGQTGRLRLFDYGQMGSLFPTDHENQGSQNNRELDKSSDRANENGDRSPRQNGS  656
             SLSREQPGQTGRLRLFD GQMGSLFPTDHENQ SQNNRELD+SSDRANENGDRSPRQNGS
Sbjct  611   SLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGS  670

Query  657   ANQEGARGERYGIAQGSSNQSILPPTQSQLYPAGLSASNGLGNLEKNRDQERGllsnldn  716
             ANQEGARGER+GIA  SSNQS+LP +QS+L  AGLS++NGLG+LE NRDQ RGLLSNLD+
Sbjct  671   ANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDH  730

Query  717   lkdllnAIQNNTIASELDYRSRLLEAIQNNEPLKDSIVGTQLLKDPTTKVFYDKFQLKIS  776
             L  LLNAI+NNTIASE D+RSRLLEAIQNNEPLKDS+VG+QLLKDPTTK+FYDKFQLKIS
Sbjct  731   LESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKIS  790

Query  777   STKILEILENRIQKSIETTNETLNAFNALDSQAIDKNAISNSVGLNPTQESEITDNSVEF  836
             + K+LEILENR++KSIETTNE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVE+
Sbjct  791   PKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVEL  850

Query  837   NNAQEQDTQENAqttlkqetqeqetpttPSIALNPKIDFKPSEEVLIKGAKNRYKANIKA  896
             NNAQEQ +QE+        T        P+I+LNPKIDFKPSEEVLIKGAK RYKANIKA
Sbjct  851   NNAQEQTAQEQDTQKNAPTT--------PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKA  902

Query  897   IELLKELQAKQEILKGDYHATQEEQEILAQFSGWGGLESYFKKDQHPEEFKELNALLTKD  956
             IELLKELQAKQEILKGDY AT  EQEILAQFSGWGGLESYFKK Q PEEFKELNALLTKD
Sbjct  903   IELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKD  962

Query  957   EFRRAYSSTRDAYYTPKLVIDSIYQALDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1016
             EFRRAY S+RDAYYTPKLVIDSIYQAL+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN
Sbjct  963   EFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1022

Query  1017  YRFIGTELDPISANISQFLYPNQVIQNTALENHHFYQEYDAFVGNPPYGNHKIYSSNDKE  1076
             YRF+GTELDPISA+ISQFLYPNQVIQNTALENH+FYQ+YDAFVGNPPYGNHKIYS  DKE
Sbjct  1023  YRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKE  1082

Query  1077  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNPKTREYIVQNATFLGAIRLPNSV  1136
             LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPK RE I +NATFLGAIRLPNSV
Sbjct  1083  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSV  1142

Query  1137  FKATGTEVSSDIVFFKKGVDEAIHQSFTKAMPYYGKIIDSLDDDTLFALQNNRFDSFIPS  1196
             FKATG+EV+SDIVFFKKGVD A +QSFTKAMPYY+KII++LDDDTLFALQNNRFDSFIPS
Sbjct  1143  FKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPS  1202

Query  1197  DQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYSEQDYKIIKDFMDRVGENNINLNEQT  1256
             DQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGY EQDY IIKDFMD+VGENNI+LNEQT
Sbjct  1203  DQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQT  1262

Query  1257  LNEYFINHPENILGHLSLEKTRYSFEINGEQIYKYELQALENKSLDLSQALSQAIEKLPK  1316
             LNEYFI+HPENILGHLSLEKTRYS E+NGEQIYKYELQALE+KSLDLSQAL+QAIEKLPK
Sbjct  1263  LNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPK  1322

Query  1317  DVYQYHKTTLKTDALIIDANNERYQEVQKLIKNLARGELVKWDNLYYQLEQNNEMGIFLR  1376
             +VYQYHKTTLKTD+LIID+NNERYQEVQKLIKNL RGELVKWD+LY+QLEQNNE GIFLR
Sbjct  1323  GVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLR  1382

Query  1377  PTKINSKVQDSRLKAYFKIKDALNDLTSAELNPLSSDLELESKRVRLNLVYDGFVKKFGY  1436
             PTKINSK QDSRLKAYFKIKDALNDLTSAELNPLSSDLELE+KR +LNLVYD FVKKFGY
Sbjct  1383  PTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGY  1442

Query  1437  LNENKNRKDIKQDLYGAKVLGLEKDFEKEITARSAKMQNIEPRQAQAKKAQIFFERTLNP  1496
             LNENKNRKDIKQDLYGAKVLGLEKDFEKEIT+RSAK+QNIEPRQAQAKKAQIFFERTLNP
Sbjct  1443  LNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNP  1502

Query  1497  KKELIITNAKEALIASINQKGCLDLHFIRDHFKTQSLETTIKELLEQKLIYKDHKDNGDY  1556
             KKELIITNAKEALIASINQKGCLDLHFI+DHF TQSLETTIKELLEQKLIYKDHKDNG+Y
Sbjct  1503  KKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGY  1562

Query  1557  ILANDYLSGNVKRKLKEVKDAINQGVERLEANVKDLELIIPKDLKATEIMANINSPWIPT  1616
             ILANDYLSGNVKRKLKEVK+AINQGVE LEANVKDLELIIPKDLKATEIMANINSPWIPT
Sbjct  1563  ILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPT  1622

Query  1617  QYLEEFLIELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVFARSNELNELYGIR  1676
             QYLEEFL+ELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEV  RSNELNELYGIR
Sbjct  1623  QYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIR  1682

Query  1677  HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELK  1736
             HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELK
Sbjct  1683  HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELK  1742

Query  1737  EAFKDWIYKDYTRRTYLEQIYNDTFNNSVLKTYDGSQLELEGFNQYISLRPHQKNAIFRT  1796
             EAFKDWIYKDY+RRT LEQIYNDTFNN VLKTYDGSQLELEGFN+ I LRPHQKNAIFRT
Sbjct  1743  EAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRT  1802

Query  1797  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1856
             IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN
Sbjct  1803  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1862

Query  1857  VLVVDSKDITEKERELLYNQIANNNYDAVIIAHTHLELLSNPReiieelkeeelvnaekn  1916
             VLVVDSKDITEKERELL+NQIANNNYDAVIIAHTHLELLSNPR IIEELKEEELVNAEKN
Sbjct  1863  VLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKN  1922

Query  1917  FERQELAYKNNPRETKKPNERAFKNKLDKIRNKYDAILEKQGSYIDIGQMGIDNLIVDEA  1976
             FERQELAY+NNPRETKKPNERAFKNKLDKIR KYDAILEKQGS IDI+QMGIDNLIVDEA
Sbjct  1923  FERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEA  1982

Query  1977  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMY  2036
             HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSEMY
Sbjct  1983  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMY  2042

Query  2037  HLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2096
             HLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM
Sbjct  2043  HLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2102

Query  2097  YRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2156
             YRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID
Sbjct  2103  YRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2162

Query  2157  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLE  2216
             RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLE
Sbjct  2163  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLE  2222

Query  2217  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNL  2276
             TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNL
Sbjct  2223  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNL  2282

Query  2277  IAPSkkelenelkekeakninlDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2336
             IAPSKKELENELKEKEAK++NLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKT
Sbjct  2283  IAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2342

Query  2337  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQMEGRGIR  2396
             EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQ RLVAMHELDCPWRPDELLQMEGRGIR
Sbjct  2343  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIR  2402

Query  2397  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFTM  2456
             QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF M
Sbjct  2403  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNM  2462

Query  2457  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFNKEHYFNEENLKNNASKLDFLH  2516
             GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAF+KE+YFNEENLKNNAS+ D+L 
Sbjct  2463  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLK  2522

Query  2517  KELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKL  2576
             +ELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKL
Sbjct  2523  QELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKL  2582

Query  2577  KEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2636
             KEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL
Sbjct  2583  KEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2642

Query  2637  SPKDNPNIAYSPSNMVYKNDTGNMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENS  2696
             SPKDNPN++YSPSNMVYKNDT+NMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENS
Sbjct  2643  SPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENS  2702

Query  2697  IETTQENIVKYTRLVEQKPPYPRLEYLQSLKLDHKTLIDDLAKMGRDRDYKPVFNPKSKE  2756
             IETTQENI KYTRLVEQKP+YPRLEYLQ+LK DHKTLIDDLAKM++DRDYKPVFNPKSKE
Sbjct  2703  IETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKE  2762

Query  2757  VLEKMNAEKRASLENEGITEEIKEQANQEAHRPMKKAANDDYDMGM  2802
             VL ++NAEKRASLENE++TEEIKEQANQEAHRPMKKAANDDYDMGM
Sbjct  2763  VLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

10) HPELS_04195 in NC_017063


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3930 bits (14947),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2553/2790 (92%), Positives = 2680/2790 (97%), Gaps = 15/2790 (0%)

Query  6     NKKKLKELREQPNLFSILDNGDIAINNPAEESDKANEIQDPLPYVVKTQINKASMISRNP  65
             +KKK K+   QPNLFSILDNGDIA NNP EESD+ NEIQ+PLPYVVKTQIN A MISRNP
Sbjct  15    QKKKAKN--PQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNP  72

Query  66    IEWAKYLSFEKRIYKDNSKEDVRFFANGEIKESSRVYEANKEGFERRITKRYDLIDTINN  125
             IEWA+YLSFE+R+ KDNSKEDV FFANGEIKESSRVYEAN EGFERRITKRYDLIDTI N
Sbjct  73    IEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRN  132

Query  126   KEFFSKEIEILTHTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEV  185
             +EFFS+EIEILT TNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEV
Sbjct  133   REFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEV  192

Query  186   ERTKDGELIREIIPSISSAECFKLYNKLPFESInnentklntndneeVKKLEFELAKEAH  245
             ERT+DG L+REIIP++SS E FKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKE H
Sbjct  193   ERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVH  252

Query  246   ALILEQRLLSATNYYSWIDKDDYANFAWKISRLINENKLKENHLSADNANKIKQFFFNNG  305
             ALILEQ+LLSAT+YY+WIDKDD ANFAWK+ RLINENKLKENHLSADNANKIKQFFFNNG
Sbjct  253   ALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNG  312

Query  306   FILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYYESVYVNGDGNQREIKPFK  365
             FILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQKYYESVYVNGDGN+REIKPFK
Sbjct  313   FILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFK  372

Query  366   EILRDINNFEKAYQQRYNKLVSLSAAIIQAKEGGNERQKSSAnnnntikntietntsnni  425
             EILRD+NNFEKAYQQRYN LVSL+ AIIQAKE++NERQKSSANNNN I+NTIETNTSNNI
Sbjct  373   EILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNI  432

Query  426   iqnndnnhpnLSVADLELEQQNLGEPNGEEKTNRADEPSRARAGIPQEIHRRSEPRGQQE  485
             I+NNDNNHPNLSVADLELEQQNLGE NG EKTNRADEP+ +RAGIPQEIHRRSE   +QE
Sbjct  433   IKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQE  492

Query  486   GVERSSDEDLSHQDSSLFTEPREQGGTRGVYRSSDQQAVSEESHRERDRIHEHVSRGDGV  545
             G+ERSSDE+LSHQDSSLF EPREQG TRGVYRSSDQQAVS  SHRERDRIHEHVSRGDG+
Sbjct  493   GMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGI  552

Query  546   SARADARANSNGASSQASRMENGARSEEKGDNPSDERGVSQTPQSPSHQQNSSRDLGLSL  605
             SARA+ARANSNGASS ASRMENGARSEEKGDNP+DERG+++ PQSPSHQQNSSRDLGLSL
Sbjct  553   SARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSL  612

Query  606   SREQPGQTGRLRLFDHGQMGSLFPTDHENQRSKNDNELDKSSDRANENGDKSPRQNGSAN  665
             SREQPGQTGRLRLFDHGQMGSLFPTDHENQRS+N+ ELD+SSDRANENGD+SPRQNGSAN
Sbjct  613   SREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSAN  672

Query  666   QEGARSERYGIAQGSSDQSVLPLAQSRLHHAGLSTPNGLRDLEENRDQerrllsnlnhle  725
             QEGAR+ER+GIA  SS+QSVLPLAQSRLHHAGLSTPNGL  LEENRDQ R LLSNL+HLE
Sbjct  673   QEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLE  732

Query  726   sllNAIRNNTIASEPDFRSRLLEAIYHNEPLKDSVVGVQLLKDPTTKIFYDKFQLKISPK  785
             SLLNAIRNNTIASEPDFRSRLLEAI +NEPLKDS+VG QLLKDPTTKIFYDKFQLKISPK
Sbjct  733   SLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPK  792

Query  786   KVLEILENRLKKSIETANETLNAFNALDSQAMDKNAISNSVGLNPTQENHITDNSVELNN  845
             KVLEILENRLKKSIET+NE+LNAFNALDSQA+D NAISNS+GLNPTQE+ ITDNSVELNN
Sbjct  793   KVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNN  852

Query  846   tqeqtaqeqdtqesaqttLKqetqeretpttpAIPLNPKIDFKPSEEVLIKGAKTRYKAN  905
             +QEQTA             +++  ++++PTTPAIPLNPKIDFKPSEEVLIKGAKTRYKAN
Sbjct  853   AQEQTA-------------QEQDTQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKAN  899

Query  906   IKAIELLKELQDKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQHPKEFKELKALL  965
             IKAIELLKELQ KQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQ P EFKEL+ALL
Sbjct  900   IKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALL  959

Query  966   TKDEFRRAYLSVRDAYYTPKLVIDSIYQALDQLGFNNDNHPKEIFEPSLGTGKFIAHAPS  1025
             TKDEFRRAYLS RDAYYTPKLVIDSIYQAL+QLGFNNDNH KEIFEPSLGTGKFIAHAPS
Sbjct  960   TKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPS  1019

Query  1026  DKNYRFMGTELDPISANISKFLYPNQVIQNTALENHTFHQDYDAFVGNPPYGNHKIYSSN  1085
             DKNYRFMGTELDPISA+IS+FLYPNQVIQNTALENH F QDYDAFVGNPPYGNHKIYS  
Sbjct  1020  DKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFY  1079

Query  1086  DAELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLP  1145
             D ELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLP
Sbjct  1080  DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLP  1139

Query  1146  NSVFKATGAEVTSDIVFFKKGVDEAINQSFTKAMPYYDKIINSLDDDTLFALQNNRFDSF  1205
             NSVFKATGAEVTSDIVFFKKGVD A NQSFTKAMPYYDKIIN+LDDDTLFALQNNRFDSF
Sbjct  1140  NSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSF  1199

Query  1206  IPSDQLKIVNAVASHFGFKQEKLQHWYEKIDTANFGYSEQDYKIIKDFMDKVGENNIHLN  1265
             IPSDQLKIVNA+ASHFGF+QEKLQ+WYEKIDTANFGY EQDY IIKDFMDKVGENNIHLN
Sbjct  1200  IPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLN  1259

Query  1266  EQTLNEYFIHHPENILGRLSLEKTRYSSEINGEQIYKYELQALEDESLDLSQALQQAIEK  1325
             EQTLNEYFIHHPENILG+LSLEKTRYSSE+NGEQIYKYELQALED SLDLSQAL+QAIEK
Sbjct  1260  EQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEK  1319

Query  1326  LPKDVYQYHKTTLKTDALIIDPSNERYQEVQKLIKNLERGELVKWDNLYYKLEQDNEMGI  1385
             LPK+VYQYHKTTLKTD+LIID +NERYQEVQKLIKNLERGELVKWD+LY++LEQ+NE GI
Sbjct  1320  LPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGI  1379

Query  1386  FLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDFELENKRAKLNLVYDGFVKK  1445
             FLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSD+ELENKRAKLNLVYD FVKK
Sbjct  1380  FLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKK  1439

Query  1446  FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERT  1505
             FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERT
Sbjct  1440  FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERT  1499

Query  1506  LNPKKELIITNAKEALIASINQKGGLDLHFIRDHFKTQSLETTIKELLEQKLIYKDHKDN  1565
             LNPKKELIITNAKEALIASINQKG LDLHFI+DHF TQSLETTIKELLEQKLIYKDHKDN
Sbjct  1500  LNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDN  1559

Query  1566  GDYILANDYLSGNVKRKLKEVKEAINQGVEGLEINLKDLELIIPKDLKATEIMANINSPW  1625
             G+YILANDYLSGNVKRKLKEVKEAINQGVEGLE N+KDLELIIPKDLKATEIMANINSPW
Sbjct  1560  GGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPW  1619

Query  1626  IPTQYLEEFLMELSANHYEKQYGDKMTDYQLDNLKENIKVEHLNGAYEVSIRSDELNELY  1685
             IPTQYLEEFLMELSANHYEKQYGDKMTDYQL+NLKE+IKVEHLNGAYEVSIRS+ELNELY
Sbjct  1620  IPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELY  1679

Query  1686  GIRHKDKPHSYKAPFESLLNRVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAE  1745
             GIRHKD++HSYKAPFESLLN+VLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAE
Sbjct  1680  GIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAE  1739

Query  1746  ELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAI  1805
             ELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAI
Sbjct  1740  ELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAI  1799

Query  1806  FRTIQDRSVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYP  1865
             FRTIQDR+VCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYP
Sbjct  1800  FRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYP  1859

Query  1866  NANVLVVDSKDTTEKERELLYNQIANNNYDAVIIAHTHLELLSNPREIIEGLKEEELVNA  1925
             NANVLVVDSKD TEKERELL+NQIANNNYDAVIIAHTHLELLSNPR IIE LKEEELVNA
Sbjct  1860  NANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNA  1919

Query  1926  ETIFERQELAYknnprenkkpnerAFKNKLDKIRAQYDAILEKQGSHIDISQMGIDNLIV  1985
             E  FERQELAY+NNPRE KKPNERAFKNKLDKIRA+YDAILEKQGSHIDISQMGIDNLIV
Sbjct  1920  EKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIV  1979

Query  1986  DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLYLKTRYLHQNNKKIMFLTGMPIANSLS  2045
             DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDL++KTRYLHQN+KKIM+LTG PIANSLS
Sbjct  1980  DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLS  2039

Query  2046  EMYHLQRYLTPDALKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL  2105
             EMYHLQRYLTP+ LKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL
Sbjct  2040  EMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL  2099

Query  2106  STMYRAFADIVSNDGILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS  2165
             STMYRAFADIV ND+ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS
Sbjct  2100  STMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS  2159

Query  2166  IIDRMQKCEGKKNKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYEN  2225
             IIDRMQKCEGKK+KKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYEN
Sbjct  2160  IIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYEN  2219

Query  2226  YLETHATKGTQLGFIGLSTPKTHSQKVSLEVLDNAHELESTNPLDEAQKLLESLSSYDEN  2285
             YLET+ATKGTQLGFIGLSTPKTHSQKVSLE LDNAHE E+ NPLDEAQ LLESLSSYDEN
Sbjct  2220  YLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDEN  2279

Query  2286  GNLIAPSkkelenelkekeakSVNLDEELAKGCSFDVYSDVLRHLVQMGIPQNEIAFIHD  2345
             GNLIAPSKKELENELKEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHD
Sbjct  2280  GNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHD  2339

Query  2346  AKTEEQKQDLFKKLNRGKVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2405
             AKTEEQKQDLFKKLNRG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR
Sbjct  2340  AKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2399

Query  2406  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED  2465
             GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED
Sbjct  2400  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELED  2459

Query  2466  FNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEESKYKAFNKENYFNEESLKNNASQWD  2525
             FNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEE+KYKAF+KENYFNEE+LKNNASQWD
Sbjct  2460  FNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWD  2519

Query  2526  YLKQELKDLETLQNSVIIPTHTEIKLYDLKNEESKDYELIKVKEIEPLKENASMSEELTH  2585
             YLKQELKDLETLQ+S+IIPTHTEIKLYDLKNEESKDYELIKVKE+EPLKENASMSEEL+H
Sbjct  2520  YLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAH  2579

Query  2586  KKLKEQNKQIAEQNKEKLDAIKKQFASNLNTLFLNEEEDYKLLEYKGFVVNAYKTKYQVE  2645
             KKLKEQNKQIAEQNKEKLD+IKKQFASNLN LF+NEE D KLLEYKGFVVNAYKTKYQVE
Sbjct  2580  KKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVE  2639

Query  2646  FSLSAKDNPNIAYSPSNMVYKNDTSQLFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKEL  2705
             FSLS+KDNPN++YSPSNMVYKNDT+++FSSYNFCAEIKFDGFLKRLDNAITKLPEKIKEL
Sbjct  2640  FSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKEL  2699

Query  2706  ENSIEITKENIAKYTRLVEQKLPYPRLEYLQALKWDHKTLIDDLAKMGKDRDYKPVFNPK  2765
             ENSIE T+ENIAKYTRLVEQK +YPRLEYLQALKWDHKTLIDDLAKM+KDRDYKPVFNPK
Sbjct  2700  ENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPK  2759

Query  2766  SKEVLKNLNAEKRASLVDEREEQGVKGNTK  2795
             SKEVLKNLNAEKRASL +E   + +K +++
Sbjct  2760  SKEVLKNLNAEKRASLENESVTEEIKEQAN  2789

11) HPSA_04625 in NC_017361


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3924 bits (14925),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2544/2806 (91%), Positives = 2688/2806 (96%), Gaps = 15/2806 (0%)

Query  1     MQKKKAKNPQPNLFSILDNGGIAISNPAEESDKVNAIQDPLHYVVKTQINTASMISRNPI  60
             MQKKKAKNPQPNLFSILDNG+IA +NP EESD+VN IQ+PL YVVKTQINTA MISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFEKRVYKDNSKEDVKFFANGGIKESSHVYEANKEGFERCITKRYDLIDTIRNR  120
             EWARYLSFE+RV KDNSKEDV+FFANG IKESS+VYEAN EGFER ITKRYDLIDTIRNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFHSRETEILTHTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIIKEYDYLKDIYQEVE  180
             EF SRE EILT TNSLEELKEQGLEIQLTHHNETHKKTLENGNEI+KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RETRNYGVVREIVPSMSSDEHFKLYNKLPFESInnentklntnaneeVKKLEFELAKEVH  240
             R T++  +VREI+P++SSDE FKLYNKLPFESINNENTKLNTN NEEVKKLEFELAKEVH
Sbjct  194   R-TQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVH  252

Query  241   ALILEQQLLSATNYYSWIDKDDYASFAWKIHRLINENRLKENHLSADNANKIKQFFFNNG  300
             ALILEQQLLSAT+YY+WIDKDD A+FAWK+HRLINEN+LKENHLSADNANKIKQFFFNNG
Sbjct  253   ALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNG  312

Query  301   FILGWTKEEQSAIQENRDYSLRSALLSLEEIAQAKIELQKYYESVYLNGDGNKREIKPFK  360
             FILGWTKEEQSAIQENRDYSL+S LLSLEEIAQAKIELQKYYESVY+NGDGNKREIKPFK
Sbjct  313   FILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFK  372

Query  361   EILRDINNFEKAYKERYNELVSLNEAIIQAKEssnerqnsnannnntinntikhntsiGn  420
             EILRD+NNFEKAY++RYNELVSLNEAIIQAKESSNERQ+S+ANNNN INNTI  NT  +N
Sbjct  373   EILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNT--SN  430

Query  421   nivqnndnnhlnLSMVDLELEQQNLGEPNGKERTNRADEPSRARAGIPQEIHRRSEHGGQ  480
             NI++NNDNNH NLS+ DLELEQQNLGE NGKE+TNRADEP+ +RAGIPQEIHRRSEHG +
Sbjct  431   NIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGER  490

Query  481   QERVERSSDEEFSHQDPSLFIEPREQRETRGIYRSSDQQAVSEKPHRERDRLHEHVSRGD  540
             QE +ERSSDEE+SHQD+SLFIEPREQ  TRG+YRSSDQQAVS K+HRERDR+HEHVSRGD
Sbjct  491   QEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGD  550

Query  541   GVSARTD----SNGASSQASRMENGARSEEKGDNPHNERGVSQTPQSPSHQQNSSRDLGL  596
             G+SAR++    SNGASS ASRMENGARSEEKGDNP +ERG+++ PQSPSHQQNSSRDLGL
Sbjct  551   GISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGL  610

Query  597   SLSREQPGQTGRLRLFDYGQMGSLFPTDHENQGSQNNRELDKSSDRANENGDRSPRQNGS  656
             SLSREQPGQTGRLRLFD GQMGSLFPTDHENQ SQNNRELD+SSDRANENGDRSPRQNGS
Sbjct  611   SLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGS  670

Query  657   ANQEGARGERYGIAQGSSNQSILPPTQSQLYPAGLSASNGLGNLEKNRDQERGllsnldn  716
             ANQEGARGER+GIA  SSNQS+LP +QS+L  AGLS++NGLG+LE NRDQ RGLLSNLD+
Sbjct  671   ANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDH  730

Query  717   lkdllnAIQNNTIASELDYRSRLLEAIQNNEPLKDSIVGTQLLKDPTTKVFYDKFQLKIS  776
             L  LLNAI+NNTIASE D+RSRLLEAIQNNEPLKDS+VG+QLLKDPTTK+FYDKFQLKIS
Sbjct  731   LESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKIS  790

Query  777   STKILEILENRIQKSIETTNETLNAFNALDSQAIDKNAISNSVGLNPTQESEITDNSVEF  836
             + K+LEILENR++KSIETTNE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVE+
Sbjct  791   PKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVEL  850

Query  837   NNAQEQDTQENAqttlkqetqeqetpttPSIALNPKIDFKPSEEVLIKGAKNRYKANIKA  896
             NNAQEQ +QE+        T        P+I+LNPKIDFKPSEEVLIKGAK RYKANIKA
Sbjct  851   NNAQEQTAQEQDTQKNAPTT--------PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKA  902

Query  897   IELLKELQAKQEILKGDYHATQEEQEILAQFSGWGGLESYFKKDQHPEEFKELNALLTKD  956
             IELLKELQAKQEILKGDY AT  EQEILAQFSGWGGLESYFKK Q PEEFKELNALLTKD
Sbjct  903   IELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKD  962

Query  957   EFRRAYSSTRDAYYTPKLVIDSIYQALDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1016
             EFRRAY S+RDAYYTPKLVIDSIYQAL+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN
Sbjct  963   EFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1022

Query  1017  YRFIGTELDPISANISQFLYPNQVIQNTALENHHFYQEYDAFVGIPPYGNHKIYSSNDKE  1076
             YRF+GTELDPISA+ISQFLYPNQVIQNTALENH+FYQ+YDAFVG PPYGNHKIYS  DKE
Sbjct  1023  YRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKE  1082

Query  1077  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNPKTREYIVQNATFLGAIRLPNSV  1136
             LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPK RE I +NATFLGAIRLPNSV
Sbjct  1083  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSV  1142

Query  1137  FKATGTEVSSDIVFFKKGVDEAIHQSFTKAMPYYGKIIDSLDDDTLFALQNNRFDSFIPS  1196
             FKATG+EV+SDIVFFKKGVD A +QSFTKAMPYY+KII++LDDDTLFALQNNRFDSFIPS
Sbjct  1143  FKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPS  1202

Query  1197  DQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYSEQDYKIIKDFMDRVGENNINLNEQT  1256
             DQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGY EQDY IIKDFMD+VGENNI+LNEQT
Sbjct  1203  DQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQT  1262

Query  1257  LNEYFINHPENILGHLSLEKTRYSFEINGEQIYKYELQALENKSLDLSQALSQAIEKLPK  1316
             LNEYFI+HPENILGHLSLEKTRYS E+NGEQIYKYELQALE+KSLDLSQAL+QAIEKLPK
Sbjct  1263  LNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPK  1322

Query  1317  DVYQYHKTTLKTDALIIDANNERYQEVQKLIKNLARGELVKWDNLYYQLEQNNEMGIFLR  1376
             +VYQYHKTTLKTD+LIID+NNERYQEVQKLIKNL RGELVKWD+LY+QLEQNNE GIFLR
Sbjct  1323  GVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLR  1382

Query  1377  PTKINSKAQDLRIKAYFKIKDALNDLTSAELNPLSSDLELESKRAKLNLVYDEFVKKFGY  1436
             PTKINSKAQD R+KAYFKIKDALNDLTSAELNPLSSDLELE+KRAKLNLVYDEFVKKFGY
Sbjct  1383  PTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGY  1442

Query  1437  LNENRNRKDIKQDLYGAKILGLEKDFEKEITARSAKMQNIEPRQAQAKKAQIFFERTLNP  1496
             LNEN+NRKDIKQDLYGAK+LGLEKDFEKEIT+RSAK+QNIEPRQAQAKKAQIFFERTLNP
Sbjct  1443  LNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNP  1502

Query  1497  KKEFIITNAKEALITSINQKGGLDLHFIRDHFKTQSLETTIKELLEQKLIYKDHKDNGDY  1556
             KKE+IITNAKEALI+SINQKG LDLHFI+DHF TQSLETTIKELLEQKLIYKDHKDNG+Y
Sbjct  1503  KKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGY  1562

Query  1557  ILANDYLSGNVKRKLKEVKDAINQGVERLEVNLQDLELIIPKDLKATAIMANINSPWIPT  1616
             ILANDYLSGNVKRKLKEVK+AINQGVE LE N++DLELIIPKDLKAT IMANINSPWIPT
Sbjct  1563  ILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPT  1622

Query  1617  QYLEEFLIELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVFARSNELNELYGIR  1676
             QYLEEFL+ELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEV  RSNELNELYGIR
Sbjct  1623  QYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIR  1682

Query  1677  HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELK  1736
             HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELK
Sbjct  1683  HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELK  1742

Query  1737  EAFKDWIYKDYTRRTYLEQIYNDTFNNSVLKTYDGSQLELEGFNQYISLRPHQKNAIFRT  1796
             EAFKDWIYKDY+RRT LEQIYNDTFNN VLKTYDGSQLELEGFN+ I LRPHQKNAIFRT
Sbjct  1743  EAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRT  1802

Query  1797  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1856
             IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN
Sbjct  1803  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1862

Query  1857  VLVVDSKDITEKERELLYNQIANNNYDAVIIAHTHLELLSNPReiieelkeeelvnaekn  1916
             VLVVDSKDITEKERELL+NQIANNNYDAVIIAHTHLELLSNPR IIEELKEEELVNAEKN
Sbjct  1863  VLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKN  1922

Query  1917  FERQELAYKNNPRETKKPNERAFKNKLDKIRNKYDAILEKQGSYIDIGQMGIDNLIVDEA  1976
             FERQELAY+NNPRETKKPNERAFKNKLDKIR KYDAILEKQGS IDI+QMGIDNLIVDEA
Sbjct  1923  FERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEA  1982

Query  1977  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMY  2036
             HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSEMY
Sbjct  1983  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMY  2042

Query  2037  HLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2096
             HLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM
Sbjct  2043  HLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2102

Query  2097  YRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2156
             YRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID
Sbjct  2103  YRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2162

Query  2157  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLE  2216
             RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLE
Sbjct  2163  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLE  2222

Query  2217  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNL  2276
             TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNL
Sbjct  2223  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNL  2282

Query  2277  IAPSkkelenelkekeakninlDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2336
             IAPSKKELENELKEKEAK++NLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKT
Sbjct  2283  IAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2342

Query  2337  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQMEGRGIR  2396
             EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQ RLVAMHELDCPWRPDELLQMEGRGIR
Sbjct  2343  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIR  2402

Query  2397  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFTM  2456
             QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF M
Sbjct  2403  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNM  2462

Query  2457  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFNKEHYFNEENLKNNASKLDFLH  2516
             GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAF+KE+YFNEENLKNNAS+ D+L 
Sbjct  2463  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLK  2522

Query  2517  KELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKL  2576
             +ELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKL
Sbjct  2523  QELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKL  2582

Query  2577  KEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2636
             KEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL
Sbjct  2583  KEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2642

Query  2637  SPKDNPNIAYSPSNMVYKNDTGNMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENS  2696
             SPKDNPN++YSPSNMVYKNDT+NMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENS
Sbjct  2643  SPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENS  2702

Query  2697  IETTQENIVKYTRLVEQKPPYPRLEYLQSLKLDHKTLIDDLAKMGRDRDYKPVFNPKSKE  2756
             IETTQENI KYTRLVEQKP+YPRLEYLQ+LK DHKTLIDDLAKM++DRDYKPVFNPKSKE
Sbjct  2703  IETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKE  2762

Query  2757  VLEKMNAEKRASLENEGITEEIKEQANQEAHRPMKKAANDDYDMGM  2802
             VL ++NAEKRASLENE++TEEIKEQANQEAHRPMKKAANDDYDMGM
Sbjct  2763  VLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

12) HPSH417_07570 in NC_017739


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3921 bits (14914),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2546/2789 (92%), Positives = 2697/2789 (97%), Gaps = 12/2789 (0%)

Query  16    EPNLFSILDNGDIATNNLAEESDKVNETQEPLPYVVKTQINTARMISRNPIEWARYLSFE  75
             +PNLFSILDNGDIATNN  EESD+VNE QEPLPYVVKTQINTARMISRNPIEWARYLSFE
Sbjct  23    QPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPIEWARYLSFE  82

Query  76    RRVHKDNSREDVNFFANGEIKESSRVYEANEEGFERRITKRYDLID--RNKEFSLKEIDI  133
             RRVHKDNS+EDVNFFANGEIKESSRVYEANEEGFERRITKRYDLID  RN+EF  +EI+I
Sbjct  83    RRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNREFFSREIEI  142

Query  134   LTYTNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIYHEVERTKAGELVR  193
             LTYTNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIY+EVERT+ G LVR
Sbjct  143   LTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVERTQDGKLVR  202

Query  194   GIIPSISSAEYFKLYNKLPFESInnentqlntnnneeVKKLEFELAKEVHVLILEQKLLS  253
              IIP++SS EYFKLYNKLPFESINNENT+LNTN+NEEVKKLEFELAKEVH LILEQ+LLS
Sbjct  203   EIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHALILEQQLLS  262

Query  254   ATDYYSWIDKDDYASFDWKMHRLINEDKLKENHLITDNANKIKRFFFNNDFILGWTKEEQ  313
             ATDYY+WIDKDD A+F WKMHRLINE+KLKENHL +DNANKIK+FFFNN+FILGWTKEEQ
Sbjct  263   ATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGFILGWTKEEQ  322

Query  314   SAMQENRDYSLRSALLSLEEIAQAKIELQEYYESVYVNGDGSKREIKPFKEILRDINNFE  373
             SA+QENRDYSL+S LLSLEEIAQAKIELQ YYESVYVNGDG+KREIKPFKEILRD+NNFE
Sbjct  323   SAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKEILRDMNNFE  382

Query  374   KAYKERYNELVSLNEAIIQAKegsneqqnsnannnntikntietntsnniiqnndnnnpn  433
             KAY++RYNELVSLNEAIIQAKE+SNE+Q+S+ANNNN I+NTIETNTSNNII+NNDNN+PN
Sbjct  383   KAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNIIKNNDNNHPN  442

Query  434   LSIADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGQQEGVERSSDEEL  493
             LS+ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG +QEG+ERSSDEEL
Sbjct  443   LSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEGMERSSDEEL  502

Query  494   SHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDRLHEHVSRGDGVSARADTRADS  553
             SHQDSSLFIEPREQG TRGVYRSSDQQAVS KSHRERDR+HEHVSRGDG+SARA++RA+S
Sbjct  503   SHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGISARAEARANS  562

Query  554   NGASSQASRMENGARSEEKGDNPSDERGVSPTPQSPSHQQNSFRDLGLSLSREQPGQTGR  613
             NGASS ASRMENGARSEEKGDNP+DERG++  PQSPSHQQNS RDLGLSLSREQPGQTGR
Sbjct  563   NGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLSREQPGQTGR  622

Query  614   LRLFDHGQMGSLFPTDHENQRSKNDNELDKSSNRTNENGDKSPRQNGSADQESARSERYG  673
             LRLFDHGQMGSLFPTDHENQRS+N+ ELD+SS+R+NENGD+SPRQNGSA+QE+AR+ER+G
Sbjct  623   LRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQEGARGERFG  682

Query  674   IAQGSSSQSVLPLAQSRLHHAGLSAPNGLGNLEKDRDQERGLSSNLDRLESLLNAIRNNT  733
             IA  SS+QSVLPLAQSRLHHAGLS+PNGLG+LE +RDQ RGL SNLD+LESLLNAIRNNT
Sbjct  683   IAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLESLLNAIRNNT  742

Query  734   IASEPDFRSRLLEAIQNNEPLKDSIVGIQLLKDPTTKIFYDKFQLKISPKKVLEILENRI  793
             IASEPDFRSRLLEAIQNNEPLKDS+VG QLLKDPTTKIFYDKFQLKISPKKVLEILENR+
Sbjct  743   IASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKKVLEILENRL  802

Query  794   KKSIETANETLNAFNALDSQAIDGNAISNSVGLNPTQESGITDNSVELnnaqeqtaqeqd  853
             KKSIET+NE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVELNNAQEQTAQEQD
Sbjct  803   KKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNAQEQTAQEQD  862

Query  854   tqenaqttIKQETPTAPAIPLNPKTDFKPSEEVLIKGAKTCYKANIKAIELLKELQAKQE  913
                      ++++PT+PAIPLNPK DFKPSEEVLIKGAKT YKANIKAIELLKELQAKQE
Sbjct  863   --------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE  914

Query  914   ILKGDYYATQEEQEILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDEFRRAYSSTRDA  973
             ILKGDYYAT  EQEILAQFSGWGGLESYFKK Q PEEFKELNALLTKDEFRRAY S+RDA
Sbjct  915   ILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDA  974

Query  974   YYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFVGTELDPIS  1033
             YYTPKLVIDSIYQ+L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRF+GTELDPIS
Sbjct  975   YYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS  1034

Query  1034  ANISKFLYPNQVIQNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKELSNESVHNYFLG  1093
             A+IS+FLYPNQVIQNTALENHQFYQ+YDAFVGNPPYG+HKIYS  DKELSNESVHNYFLG
Sbjct  1035  ASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLG  1094

Query  1094  KAIKELKDDGIGAFVVSSWFMDGKNPKMREHIAQNATFLGAIRLPNSVFKATGAEVSSDI  1153
             KAIKELKDDGIGAFVVSSWFMD+KNPKMREHIA+NATFLGAIRLPNSVFKATGAEV+SDI
Sbjct  1095  KAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDI  1154

Query  1154  VFFKKGVDGATNQSFTKAMPYYDKIIDSLDNDTLFALQNNRFDSFTPSDQLKIVNAIASH  1213
             VFFKKGVD ATNQSFTKAMPYYDKII++LD+DTLFALQNNRFDSF PSDQLKIVNAIASH
Sbjct  1155  VFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASH  1214

Query  1214  FGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINLNEQTLNEYFIHHPENI  1273
             FGF+QEKLQRWYEKIDTANFGY+EQDY IIK+F+DKVGENNI+LNEQTLNEYFIHHPENI
Sbjct  1215  FGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENI  1274

Query  1274  LGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALHQAIEKLPKDVYQYHKTTFKT  1333
             LGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQAL+QAIEKLPK+VYQYHKTT+KT
Sbjct  1275  LGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKT  1334

Query  1334  DALIIDANNERYQEVQKLIKNLERGELVKWDNLYFQLEQNNEMGIFLKPTKINSKVQDSR  1393
             D+LIID+NNERYQEVQKLIKNLERGELVKWD+LYFQLEQNNE GIFL+PTKINSK QDSR
Sbjct  1335  DTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSR  1394

Query  1394  LKAYFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYLNENKNRKDIKQ  1453
             LKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYLNENKNRKDIKQ
Sbjct  1395  LKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQ  1454

Query  1454  DLYGAKVLGLEKDFEKEITSRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1513
             DLYGAKVLGLEKDFEKEIT+RSAK+QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA
Sbjct  1455  DLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1514

Query  1514  LIASINQKGGLNLHFIRDYFATQSLETTIKELLEQKLIYKDHKDNGDYVLANDYLSGNVK  1573
             LIASINQKG L+LHFI+D F+TQSLETTIKELLEQKLIYKDHKDNG+Y+LANDYLSGNVK
Sbjct  1515  LIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVK  1574

Query  1574  RKFKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLIELAA  1633
             RK+KEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFL+EL+A
Sbjct  1575  RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSA  1634

Query  1634  NHYEKQYGDKMTDYQLGNLKEGIKAEHLSGAYEVLVRNNELNELYGIRHKDKPHSYKVPF  1693
             NHYEKQYGDKMTDYQLGNLKE+IK EHL+GAYEV +R+NELNELYGIRHKD++HSYK PF
Sbjct  1635  NHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPF  1694

Query  1694  ESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYT  1753
             ESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDY+
Sbjct  1695  ESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYA  1754

Query  1754  RRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTIQDKAVCLDHQV  1813
             RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTIQD+AVCLDHQV
Sbjct  1755  RRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQV  1814

Query  1814  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1873
             GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK
Sbjct  1815  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1874

Query  1874  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknFERQELAYKNNP  1933
             ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAY+NNP
Sbjct  1875  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYQNNP  1934

Query  1934  RETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1993
             RETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM
Sbjct  1935  RETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1994

Query  1994  EKIAGLGNQQGSNRARDLLIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLE  2053
             EKIAGLGNQQGSNRARDL+IKTRYLHQN+KKIM+LTGTPIANSLSEMYHLQRYLTP+VL 
Sbjct  1995  EKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLK  2054

Query  2054  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDD  2113
             ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDD
Sbjct  2055  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDD  2114

Query  2114  ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  2173
             ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK
Sbjct  2115  ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  2174

Query  2174  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFI  2233
             GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLETNATKGTQLGFI
Sbjct  2175  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLETNATKGTQLGFI  2234

Query  2234  GLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSkkelenel  2293
             GLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL
Sbjct  2235  GLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL  2294

Query  2294  kekeakSVNLDEEIAKGCKFDVYSDVLRHLVQMGIPQNETAFIHDAKTEEQKQDLFKKVN  2353
             KEKEAKSVNLDEEIAKGC FDVYSDVLRHLVQMGIPQNE AFIHDAKTEEQKQDLFKK+N
Sbjct  2295  KEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLN  2354

Query  2354  RGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2413
             RG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN
Sbjct  2355  RGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2414

Query  2414  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2473
             FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA
Sbjct  2415  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2474

Query  2474  TGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEESLKNNSSKLDYLKQELKDLETLQSS  2533
             TGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEE+LKNN+S+ DYLKQELKDLETLQSS
Sbjct  2475  TGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQELKDLETLQSS  2534

Query  2534  VMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNK  2593
             ++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNK
Sbjct  2535  IIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNK  2594

Query  2594  EKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFAVNAYKTKYQVEFNLNPKDNPNIAYSP  2653
             EKLD+IKKQFASNLNDLFFNEERDCKLLEYKGF VNAYKTKYQVEF+L+PKDNPN++YSP
Sbjct  2595  EKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSP  2654

Query  2654  SNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIKITQENIAKYT  2713
             SNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSI  TQENIAKYT
Sbjct  2655  SNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYT  2714

Query  2714  RLVEQKPPYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEVLEKMNAEKRAS  2773
             RLVEQKP+YPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS+EVL ++NAEKRAS
Sbjct  2715  RLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRAS  2774

Query  2774  LENESKEMTEIKNSNKEQEIKRDIKSDDE  2802
             LENES  +TE  + + +QE  R +K   +
Sbjct  2775  LENES--VTEEIKEQANQEAHRPMKKAAN  2801

13) HPSA20_1113 in NC_022130


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3910 bits (14873),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2525/2806 (90%), Positives = 2687/2806 (96%), Gaps = 15/2806 (0%)

Query  1     MQKKKAKNPQPNLFSVLDNGGIAISNPAEESDKVNAIQDPLHYVVKTQINTASMISRNPI  60
             MQKKKAKNPQPNLFS+LDNG+IA +NP EESD+VN IQ+PL YVVKTQINTA MISRNPI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61    EWARYLSFEKRVYKDNSKEDVKFFANGGIKESSRVYEANKEGFEKCVTKRYDLIDTIRNR  120
             EWARYLSFE+RV KDNSKEDV+FFANG IKESSRVYEAN EGFE+ +TKRYDLIDTIRNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  121   EFHSRETEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIIKEYDYLKDIYQEVE  180
             EF SRE EILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEI+KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  181   RETRNYGVVREIVPSMSSDEHFKLYNKLPFESInnentklntnaneeVKKLEFELAKEVH  240
             R T++  +VREI+P++SSDE FKLYNKLPFESINNENTKLNTN NEEVKKLEFELAKEVH
Sbjct  194   R-TQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVH  252

Query  241   ALILEQQLLSATDYYSWIDKDDYASFAWKIHRLINENRLKENHLSADNANKIKQFFFNNG  300
             ALILEQQLLSATDYY+WIDKDD A+FAWK+HRLINEN+LKENHLSADNANKIKQFFFNNG
Sbjct  253   ALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNG  312

Query  301   FILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYYESVYLNGDGNKREIKPFK  360
             FILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQKYYESVY+NGDGNKREIKPFK
Sbjct  313   FILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFK  372

Query  361   EILRDINNFEKAYKERYNELVSLNEAIIQAKEssnerqnsnannnntinntikhntsiGn  420
             EILRD+NNFEKAY++RYNELVSLNEAIIQAKESSNERQ+S+ANNNN INNTI  NT  +N
Sbjct  373   EILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNT--SN  430

Query  421   nivqnndnnhlnLSMVDLELEQQNLGEPNGKERTNRADEPSRARAGIPQEIHRRSEHGGQ  480
             NI++NNDNNH NLS+ DLELEQQNLGE NGKE+TNRADEP+ +RAGIPQEIHRRSEHG +
Sbjct  431   NIIKNNDNNHPNLSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGER  490

Query  481   QERVERSSDEEFSHQDPSLFIEPREQRETRGIYRSSDQQAVSEKPHRERDRLHEHVSRGD  540
             QE +ERSSDEE+SHQD+SLFIEPREQ  TRG+YRSSDQQAVS K+HRERDR+HEHVSRGD
Sbjct  491   QEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGD  550

Query  541   GVSARTD----SNGASSQASRMENGARSEEKRDNPSDERGVSQPPQSQAHQQNSSRDLGL  596
             G+SAR++    SNGASS ASRMENGARSEEK DNP+DERG+++PPQS +HQQNSSRDLGL
Sbjct  551   GISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGL  610

Query  597   SLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSKNDNKLDKSSDRANENGDRSPRQNGS  656
             SLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRS+N+  LD+SSDRANENGDRSPRQNGS
Sbjct  611   SLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGS  670

Query  657   ANQEGARGERYGIAQGSSNQSILPPTQSQLYPAGLSASNGLGNLEKNRDQERGllsnldn  716
             ANQEGARGER+GIA  SSNQS+LP +QS+L  AGLS++NGLG+LE NRDQ RGLLSNLD+
Sbjct  671   ANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDH  730

Query  717   lkgllnAIQNNTIANEPNFRSRLLEAIQNNEPLKDSIVGTQLLKDPTTKVFYDKFQLKIS  776
             L +LLNAI+NNTIA+EP+FRSRLLEAIQNNEPLKDS+VG+QLLKDPTTK+FYDKFQLKIS
Sbjct  731   LESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKIS  790

Query  777   STKILEILENRIQKSIETTNETLNAFNALDSQAIDKNAIYNSVGLKPTQESEITDNSVEF  836
             + K+LEILENR++KSIETTNE+LNAFNALDSQAID NAI NS+GL+PTQES ITDNSVE+
Sbjct  791   PKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVEL  850

Query  837   NNAQEQDTQENAqttlkqetqeqetpttPSIALNPKIDFKPSEEVLIKGAKNRYKANIKA  896
             NNAQEQ +QE+        T        P+I+LNPKIDFKPSEEVLIKGAK RYKANIKA
Sbjct  851   NNAQEQTAQEQDTQKNAPTT--------PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKA  902

Query  897   IELLKELQAKQEILKGDYHATQEEQEILAQFSGWGGLESYFKKDQHPEEFKELNALLTKD  956
             IELLKELQAKQEILKGDY AT  EQEILAQFSGWGGLESYFKK Q PEEFKELNALLTKD
Sbjct  903   IELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKD  962

Query  957   EFRRAYSSTRDAYYTPKLVIDSIYQALDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1016
             EFRRAY S+RDAYYTPKLVIDSIYQAL+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN
Sbjct  963   EFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKN  1022

Query  1017  YRFIGTELDPISANISQFLYPNQTINHAALQNHTFYQDYDAFVGNPPYGNHKIYSSNDKE  1076
             YRF+GTELDPISA+ISQFLYPNQ I+++AL+NH FYQDYDAFVGNPPYGNHKIYS  DKE
Sbjct  1023  YRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKE  1082

Query  1077  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNPKTREYIVQNATFLGAIRLPNSV  1136
             LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KNPK RE I +NATFLGAIRLPNSV
Sbjct  1083  LSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSV  1142

Query  1137  FKATGAEVSSDIVFFKKGVDEAIHQSFTKAMPYYGKIIDSLDDDTLFALQNNRFDSFIPS  1196
             FKATGAEV+SDIVFFKKGVD A +QSFTKAMPYY+KII++LDDDTLFALQNNRFDSFIPS
Sbjct  1143  FKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPS  1202

Query  1197  DQLKIVNAIASHFGFKQEKLQHWYEKIDTTNFSYSEQDYKIIKDFIDKVGENNINLNEQT  1256
             DQLKIVNAIASHFGF+QEKLQ+WYEKIDT+NF+Y EQDY IIKDF+DKVGENNI+LNEQT
Sbjct  1203  DQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQT  1262

Query  1257  LNEYFINHPENILGHLSLEKTRYSFEINGEQIYKYELQALENKSLDLSQALSQAIEKLPK  1316
             LNEYFI+HPENILGHLSLEKTRYS E+NGEQIYKYELQALE+KSLDLSQAL+QAIEKLPK
Sbjct  1263  LNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPK  1322

Query  1317  DVYQYHKTTLKTDALIIDANNERYQEVQKLIKNLARGELVKWDNLYYQLEQNNEMGIFLR  1376
             +VYQYHKTTLKTD+LIID+NNERYQEVQKLIKNL RGELVKWD+LY+QLEQNNE GIFLR
Sbjct  1323  GVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLR  1382

Query  1377  PTKINSKAQDLRIKAYFKIKDALNDLTSAELNPLSSDLELESKRAKLNLVYDEFVKKFGY  1436
             PTKINSKAQD R+KAYFKIKDALNDLTSAELNPLSSDLELE+KRAKLNLVYDEFVKKFGY
Sbjct  1383  PTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGY  1442

Query  1437  LNENRNRKDIKQDLYGAKVLGLEKDFEKEITARSAKMQNIEPRQAQAKKAQIFFERTLNP  1496
             LNEN+NRKDIKQDLYGAKVLGLEKDFEKEIT+RSAK+QNIEPRQAQAKKAQIFFERTLNP
Sbjct  1443  LNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNP  1502

Query  1497  KKEFIITNAKEALITSINQKGGLDLHFIRDHFKTQSLETTIKELLEQKLIYKDHNNNGDY  1556
             KKE+IITNAKEALI+SINQKG LDLHFI+DHF TQSLETTIKELLEQKLIYKDH++NG+Y
Sbjct  1503  KKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGY  1562

Query  1557  ILANDYLSGNVKRKLKEVKDAINQGVEGLEVNLQDLELIIPKDLKATEIMANINSPWIPT  1616
             ILANDYLSGNVKRKLKEVK+AINQGVEGLE N++DLELIIPKDLKATEIMANINSPWIPT
Sbjct  1563  ILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPT  1622

Query  1617  QYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEYIKVEHISGACEVFARNNELNELYGIR  1676
             QYLEEFL+EL+ANHYEKQYGDKMTDYQLGNLKE IKVEH++GA EV  R+NELNELYGIR
Sbjct  1623  QYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIR  1682

Query  1677  HKDKPHSYKVPFESFLNKVLNNKDLSVKYTQVDPNDPKKEIFITDEEQSNLARQKAEELK  1736
             HKD++HSYK PFES+LNKVLNNKDLSVKY+QVDPNDPKKEIFITDEEQSNLA+QKAEELK
Sbjct  1683  HKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELK  1742

Query  1737  EAFKDWIYKDYTRRTYLEQIYNDTFNNSVLKTYDGSQLELEGFNQYISLRPHQKNAIFRT  1796
             EAFKDWIYKDY+RRT LEQIYNDTFNN VLKTYDGSQLELEGFN+ I LRPHQKNAIFRT
Sbjct  1743  EAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRT  1802

Query  1797  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1856
             IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN
Sbjct  1803  IQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNAN  1862

Query  1857  VLVVDSKDITEKERELLYNQIANNNYDAVIIAHTHLELLSNPReiieelkeeelvnaekn  1916
             VLVVDSKDITEKERELL+NQIANNNYDAVIIAHTHLELLSNPR IIEELKEEELVNAEKN
Sbjct  1863  VLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKN  1922

Query  1917  FERQELAYKNNPRETKKPNERAFKNKLDKIRNKYDAILEKQGSYIDIGQMGIDNLIVDEA  1976
             FERQELAY+NNPRETKKPNERAFKNKLDKIR KYDAILEKQGS IDI+QMGIDNLIVDEA
Sbjct  1923  FERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEA  1982

Query  1977  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMFLTGTPIANSLSEMY  2036
             HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIM+LTGTPIANSLSEMY
Sbjct  1983  HLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMY  2042

Query  2037  HLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2096
             HLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM
Sbjct  2043  HLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTM  2102

Query  2097  YRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2156
             YRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID
Sbjct  2103  YRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIID  2162

Query  2157  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLE  2216
             RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLE
Sbjct  2163  RMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLE  2222

Query  2217  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNL  2276
             TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNL
Sbjct  2223  TNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNL  2282

Query  2277  IAPSkkelenelkekeakSINLDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2336
             IAPSKKELENELKEKEAKS+NLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKT
Sbjct  2283  IAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKT  2342

Query  2337  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQMEGRGIR  2396
             EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQ RLVAMHELDCPWRPDELLQMEGRGIR
Sbjct  2343  EEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIR  2402

Query  2397  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFTM  2456
             QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDF M
Sbjct  2403  QGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNM  2462

Query  2457  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFNKEHYFNEENLKNNASKLDFLH  2516
             GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAF+KE+YFNEENLKNNAS+ D+L 
Sbjct  2463  GSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLK  2522

Query  2517  KELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKL  2576
             +ELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKL
Sbjct  2523  QELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKL  2582

Query  2577  KEQNKQITEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2636
             KEQNKQI+EQNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL
Sbjct  2583  KEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL  2642

Query  2637  SPKDNPKVSYSPSNMVYKNDTGNMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENS  2696
             SPKDNP+V+YSPSNMVYKNDT+NMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENS
Sbjct  2643  SPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENS  2702

Query  2697  IETTQENIAKYTRLVEQKPPYPRLEYLQTLKLDHKTLIDDLAKMGKDRDYKPVFNPKSKE  2756
             IETTQENIAKYTRLVEQKP+YPRLEYLQ+LK DHKTLIDDLAKM+KDRDYKPVFNPKSKE
Sbjct  2703  IETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKE  2762

Query  2757  VLEKMNAKKRASLENESVTEEIKEQANQEVHRPMKKAANDDYDMGM  2802
             VL ++NA KRASLENESVTEEIKEQANQE HRPMKKAANDDYDMGM
Sbjct  2763  VLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

14) HPSJM_06910 in NC_014560


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3874 bits (14737),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2540/2791 (92%), Positives = 2671/2791 (96%), Gaps = 25/2791 (0%)

Query  1     MQKKKLKNPQPNLFSILDNGDIATNNPIE-------IQDTLPYVVKTQINKSSMISRDPI  53
             MQKKK KNPQPNLFSILDNGDIATNNPIE       IQ+ LPYVVKTQIN + MISR+PI
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  54    EWAKYLSSEKRVYKDNSKEDVNFFANGEIKESSRVYGANKEGFERRITKRYDLIDTIRNR  113
             EWA+YLS E+RV KDNSKEDVNFFANGEIKESSRVY AN EGFERRITKRYDLIDTIRNR
Sbjct  74    EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  114   EFFTKEIEILTHTNSLEELKEQGLEIQLTHHSETHKKTLENGNEIAKEYDYLKDIYQEVE  173
             EFF++EIEILT TNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIYQEVE
Sbjct  134   EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  174   RTKDGELIREIIPSISSDECFKLYNKLPFD---NENTKLNTNDNEEIKKLEFKLAKEVHA  230
             RT+DG L+REIIP++SSDE FKLYNKLPF+   NENTKLNTNDNEE+KKLEF LAKEVHA
Sbjct  194   RTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAKEVHA  253

Query  231   LILEQQLLSATNYYSWIDKDDYANFAWKISRLINENKLKENHLSADNANKIKQFFFNNGF  290
             LILEQQLLSAT+YY+WIDKDD ANFAWK+ RLINENKLKENHLSADNANKIKQFFFNNGF
Sbjct  254   LILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFFNNGF  313

Query  291   ILGWTKEEQSAMQENrdyslrsdllslEEIAQAKIELQKYYESIYLNGDGSKRDIKPFKE  350
             ILGWTKEEQSA+QENRDYSL+SDLLSLEEIAQAKIELQKYYES+Y+NGDG+KR+IKPFKE
Sbjct  314   ILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIKPFKE  373

Query  351   ILRDINNFEKAYKQRYNELVSLNEAIIQAKEGSNERQnsnannnntinntieantsignn  410
             ILRD+NNFEKAY+QRYNELVSLNEAIIQAKE+SNERQ+S+ANNNN INNTIE+NTS    
Sbjct  374   ILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTSNNII  433

Query  411   iiknndnnhpnlslggleleqqnlgePNGEERTNRADEPSRARAGIPQEIHRRSEHGGQQ  470
               ++N++ + +++   LE ++      NG E+TNRADEP+ +RAGIPQEIHRRSEHG +Q
Sbjct  434   KNNDNNHPNLSVADLELEQQNLGEK--NGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQ  491

Query  471   EGVERSSDEELSHQDSSLFIEPREQGGTRGVYRSSDQQAVSEESHRERDRIHEHVFRGDG  530
             EG+ERSSDEELSHQDSSLFIEPREQG TRGVYRSSDQQAVS  SHRERDRIHEHV RGDG
Sbjct  492   EGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDG  551

Query  531   VsaradarangngasSPASRMENGARSEEKGDNPSNERGIprppqspshqqnssRDLGLS  590
             +SARA+ARAN+NGASSPASRMENGARSEEKGDNP++ERGIPRPPQSPSHQQNSSRDLGLS
Sbjct  552   ISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLS  611

Query  591   LSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNDNELDKSSDRANENGDRSPRQNGSA  650
             LSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQN+ ELD+SSDRANENGDRSPRQNGSA
Sbjct  612   LSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSA  671

Query  651   NQKGARGERFGIAPGSSNQSVLLPAQSRSHHAGLITPNGLRDLEKNRDQEGRllsnldhl  710
             NQ GARGERFGIAP SSNQSVL  AQSR HHAGL TPNGL  LE NRDQ   LLSNLDHL
Sbjct  672   NQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHL  731

Query  711   esllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSVVGAQLLKDPTTKIFYDKFQLKISP  770
             ESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDS+VGAQLLKDPTTKIFYDKFQLKISP
Sbjct  732   ESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISP  791

Query  771   KKVLEILENRLQKSIETTNEALNAFNALDSQAIGLNAISNSVGLNPTQENEITYNSVELN  830
             KKVLEILENRL+KSIETTNEALNAFNALDSQAI+LNAISNS+GLNPTQE+ IT NSVELN
Sbjct  792   KKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELN  851

Query  831   NaqeqtaqeqdtqetaqtaLKqetqeqetpttpRIALNPKIDFKPSEEVLIKGAKTRYKA  890
             NAQEQTA             +++  ++++PTTP I+LNPKIDFKPSEEVLIKGAKTRYKA
Sbjct  852   NAQEQTA-------------QEQDTQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKA  898

Query  891   NIKAIKLLKELQAKQEISKGGYYATLKEQEILAQFSGWGALESYFKKDQHPKEFEELKAL  950
             NIKAI LLKELQAKQEI KG+YYATLKEQEILAQFSGWG+LESYFKK Q P EF EL+AL
Sbjct  899   NIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNAL  958

Query  951   LTKDEFRRAYSSTRDAYYTPKLVIDSIYQALDRLGFNNDNHPKEIFEPSLGTGKFIAHAP  1010
             LTKDEFRRAY S+RDAYYTPKLVIDSIYQAL++LGFNNDNH KEIFEPSLGTGKFIAHAP
Sbjct  959   LTKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAP  1018

Query  1011  SDKNYRFRGTELDPISTNISQFLYPNQVIQNTALENHQFYQEYDAFVGNPPYGNHKIYSF  1070
             SDKNYRF GTELDPIS++ISQFLYPNQVIQNTALENHQFYQ+YDAFVGNPPYGNHKIYSF
Sbjct  1019  SDKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSF  1078

Query  1071  YDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRL  1130
             YDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRL
Sbjct  1079  YDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRL  1138

Query  1131  PNSVFKATGAEVTSDIVFFKKGVEKATNQSFTKAMPYYDKIINSLDDETLFALQNNRFDS  1190
             PNSVFKATGAEVTSDIVFFKKGV+KATNQSFTKAMPYYDKIIN+LDD+TLFALQNNRFDS
Sbjct  1139  PNSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDS  1198

Query  1191  FIPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINL  1250
             FIPSDQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGY+EQDY IIK+F+DKVGENNI+L
Sbjct  1199  FIPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHL  1258

Query  1251  NEQTLNEYFTHHPENILGHLSLEKTRYSSEINGEQIYKYELQALEDESLDLSQALNQAIE  1310
             NEQTLNEYF HHPENILGHLSLEKTRYSSE+NGEQIYKYELQALED SLDLSQALNQAIE
Sbjct  1259  NEQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIE  1318

Query  1311  KLPKDVYQYNKTTLKTDALIIDTNNERYQEVQKLIKNLERGELVKWDNLYFQLEQNNEMG  1370
             KLPK+VYQY+KTTLKTD+LIIDTNNERYQEVQKLIKNLERGELVKWD+LYFQLEQNNE G
Sbjct  1319  KLPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERG  1378

Query  1371  IFLKPTKINSKAQDSRLKAYLKIKDALNDLTSAELNPLSSDLELESKRVRLNLVYDGFVK  1430
             IFL+PTKINSKAQDSRLKAY+KIKDALNDLTSAELNPLSSDLELE+KR +LNLVYD FVK
Sbjct  1379  IFLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVK  1438

Query  1431  KFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFER  1490
             KFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFER
Sbjct  1439  KFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFER  1498

Query  1491  TLNPKKELIITNAKEALIASINQKGCLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKD  1550
             TLNPKKELIITNAKEALIASINQKGCLDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKD
Sbjct  1499  TLNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKD  1558

Query  1551  NGDYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSP  1610
             NG+YILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSP
Sbjct  1559  NGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSP  1618

Query  1611  WIPTQYLEEFLMDLSTNHYEKQYGDKMTDYQLENLKEKIKVEHLNGAYEVSIRSDELNEL  1670
             WIPTQYLEEFLM+LS+NHYEKQYGDKMTDYQL NLKE IKVEHLNGAYEVSIRS+ELNEL
Sbjct  1619  WIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNEL  1678

Query  1671  YGIRHKDKPHSYKAPFESLLNRVLNNKDLSVKYAQADPNDPKKEIFITDEEQSNLARQKA  1730
             YGIRHKD++HSYKAPFESLLN+VLNNKDLSVKYAQ DPNDPKKEIFITDEEQSNLA+QKA
Sbjct  1679  YGIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKA  1738

Query  1731  EELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHNIKLRPHQKNA  1790
             EELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQLELEGFNHNIKLRPHQKNA
Sbjct  1739  EELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNA  1798

Query  1791  IFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAY  1850
             IFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAY
Sbjct  1799  IFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAY  1858

Query  1851  PNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPREIIEGLKEEELVN  1910
             PNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPR IIE LKEEELVN
Sbjct  1859  PNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVN  1918

Query  1911  AETIFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLI  1970
             AE  FERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLI
Sbjct  1919  AEKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLI  1978

Query  1971  VDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLYLKTRYLHQNDKKIMFLTGTPIANSL  2030
             VDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDL++KTRYLHQNDKKIM+LTGTPIANSL
Sbjct  1979  VDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSL  2038

Query  2031  SEMYHLQRYLTPDALKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQG  2090
             SEMYHLQRYLTP+ LKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQG
Sbjct  2039  SEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQG  2098

Query  2091  LSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEG  2150
             LSTMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEG
Sbjct  2099  LSTMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEG  2158

Query  2151  SIIDRMQKCESKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYE  2210
             SIIDRMQKCE+KKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYE
Sbjct  2159  SIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYE  2218

Query  2211  NYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHGIENKNPLDEAQELLESLSSYDE  2270
             NYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAH  ENKNPLDEAQELLESLSSYDE
Sbjct  2219  NYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDE  2278

Query  2271  NGNLIAPSkkelenelkekeakSVNLDEELAKGCSFDVYSDVLRHLVQMGIPQNEIAFIH  2330
             NGNLIAPSKKELENELKEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIH
Sbjct  2279  NGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIH  2338

Query  2331  DAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEG  2390
             DAKTEEQKQDLFKK+NRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEG
Sbjct  2339  DAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEG  2398

Query  2391  RGVRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELE  2450
             RG+RQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELE
Sbjct  2399  RGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELE  2458

Query  2451  DFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEESLKNNASKL  2510
             DFNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEE+LKNNAS+ 
Sbjct  2459  DFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQW  2518

Query  2511  DYLKQELKDLETLQSSVMIPTHTEIKLYDLRNEESNDYELIKVKEVEPLKENASMSEELT  2570
             DYLKQELKDLETLQSS++IPTHTEIKLYDL+NEES+DYELIKVKEVEPLKENASMSEEL+
Sbjct  2519  DYLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELA  2578

Query  2571  RKKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQV  2630
             +KKLKEQNKQIAEQNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQV
Sbjct  2579  HKKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQV  2638

Query  2631  EFSLNPKDNPNIAYSPSNMVYKNDTGNMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKE  2690
             EFSL+PKDNPN++YSPSNMVYKNDT+NMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKE
Sbjct  2639  EFSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKE  2698

Query  2691  LENSIKITQENIAKYTRLVEQKPPYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNP  2750
             LENSI  TQENIAKYTRLVEQKP+YPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNP
Sbjct  2699  LENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNP  2758

Query  2751  KSKEVLKNLNAEKRASLVDEREEQGVKGNTK  2781
             KSKEVLKNLNAEKRASL +E   + +K +++
Sbjct  2759  KSKEVLKNLNAEKRASLENESVTEEIKEQAN  2789

15) HPF57_0303 in NC_017367


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3855 bits (14665),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2547/2818 (91%), Positives = 2695/2818 (96%), Gaps = 23/2818 (0%)

Query  1     MQKKKAKNPQPNLFSILDDGDVINTSSYKQEPEPQIKEPQSSATQNPNKEQETPNYVVKT  60
             MQKKKAKNPQPNLFSILD+GD+   ++  +             ++  N  QE   YVVKT
Sbjct  14    MQKKKAKNPQPNLFSILDNGDIATNNPIEE-------------SDRVNEIQEPLPYVVKT  60

Query  61    QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI  120
             QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI
Sbjct  61    QINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRI  120

Query  121   TKRYDLIDTIRNREFFSKEIDFLTYTNSLEELKEQGLEIQlthhhethkktleNGNEIAK  180
             TKRYDLIDTIRNREFFS+EI++LTYTNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI K
Sbjct  121   TKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVK  180

Query  181   EYDYLKDIYQEVEKTKDAELVREIIPSISSAEYFKLYNKPPFEStnnentklntndneeV  240
             EYDYLKDIYQEVE+T+D+ LVREIIP++SS EYFKLYNK PFES NNENTKLNTNDNEEV
Sbjct  181   EYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEV  240

Query  241   KKLEFELAKEVHVLILEQQLLSATDYYSWIDKDDYASFAWKMHRLINEDKLKENHLSADN  300
             KKLEFELAKEVH LILEQQLLSATDYY+WIDKDD A+FAWKMHRLINE+KLKENHLSADN
Sbjct  241   KKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADN  300

Query  301   ANKIKQFFFNNGFILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYYESVYVN  360
             ANKIKQFFFNNGFILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQKYYESVYVN
Sbjct  301   ANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVN  360

Query  361   GDGSKREIKPFKEILRDINNFEKAYKERYNELVRLNEAIIQAKERsneqqnsnandnnPI  420
             GDG+KREIKPFKEILRD+NNFEKAY++RYNELV LNEAIIQAKE SNE+Q+S+AN+NNPI
Sbjct  361   GDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPI  420

Query  421   KNTIETNTSignniiqnndnnnpnlsiADLELEQQNLGEQNGKERTNRADEPNRTRAGIP  480
             +NTIETNTS      ++N++ N ++  ADLELEQQNLGE+NGKE+TNRADEPN TRAGIP
Sbjct  421   NNTIETNTSNNIIKNNDNNHPNLSV--ADLELEQQNLGEKNGKEKTNRADEPNGTRAGIP  478

Query  481   QEIHRRSEHGGLQEGVERSSDEDLSHQDSSLFIEPRDTRGTRGVYRSSDQQAVSEKSHRE  540
             QEIHRRSEHG  QEG+ERSSDE+LSHQDSSLFIEPR+   TRGVYRSSDQQAVS KSHRE
Sbjct  479   QEIHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRE  538

Query  541   GDRLHEHVSRGDRVSARAEARADSNGASSQASRMENGARSEEKGDNPSDERRVsqtpqss  600
              DR+HEHVSRGD +SARAEARA+SNGASS ASRMENGARSEEKGDNP+DER +++ PQS+
Sbjct  539   RDRIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSP  598

Query  601   shqqnssrnlglslsrEQPGQTGRLRLFDHGQMGSLFPTDHENQRERNDNELDRSSNRAN  660
             SHQQNSSR+LGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQR +N+ ELD SS+RAN
Sbjct  599   SHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRAN  658

Query  661   ENGDKSPRQNGSANQEGARSERYGIAQGSSNQSVLPLAQSRlhhaglgapnglgnlEENR  720
             ENGD+SPRQNGSANQEGAR+ER+GIA  SSNQSVLPLAQSRLHHAGL++PNGLG+LEENR
Sbjct  659   ENGDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENR  718

Query  721   DQERGllsnldhlesllnAIRNNTIASEPDFRFRLLEAIQNNEPLKDSLVGAQLLKDPTT  780
             DQ RGLLSNLDHLESLLNAIRNNTIASEPDFR RLLEAIQNNEPLKDSLVGAQLLKDPTT
Sbjct  719   DQKRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTT  778

Query  781   KIFYDKFQLKISPKKVLEILENRIKKSIETTNETLNAFNTLDSQAIDLNAISDSVGLNPI  840
             KIFYDKFQLKISPKKVLEILENR+KKSIETTNE+LNAFN+LDSQAIDLNAIS+S+GLNP 
Sbjct  779   KIFYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPT  838

Query  841   QENEIADNSVELDNIqeqtaqeqdtqenaqttIKQETPTKPVIPLNPKIDFKPSEEVLIK  900
             QE+ I+DNSVEL+N         + Q   +   ++++PT P IPLNPKIDFKPSEEVLIK
Sbjct  839   QESKITDNSVELNN--------AQEQTAQEQDTQKNAPTTPAIPLNPKIDFKPSEEVLIK  890

Query  901   GAKTRYKANMKAIELLKELQAKQEILKGDYHATQEEQEILAQFSGWGGLESYFKKDQRPK  960
             GAKTRYKAN+KAIELLKELQAKQEILKGDY AT  EQEILAQFSGWGGLESYFKK Q P 
Sbjct  891   GAKTRYKANIKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPE  950

Query  961   EFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQALDQLGFNNDSHQKEIFEPSLGT  1020
             EFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQAL+QLGFNND+HQKEIFEPSLGT
Sbjct  951   EFKELNALLTKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGT  1010

Query  1021  GKFIAHAPSDKNYRFMGTELDPISANISKFLYPNQVIQNTALENHQFYQEYDAFVGNPPY  1080
             GKFIAHAPSDKNYRFMGTELDPISA+IS+FLYPNQVIQNTALENHQFYQ+YDAFVGNPPY
Sbjct  1011  GKFIAHAPSDKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPY  1070

Query  1081  GSHKIYSSNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNSKMREHIAQNA  1140
             G+HKIYS  DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KN+KMREHIA+NA
Sbjct  1071  GNHKIYSFYDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNA  1130

Query  1141  TFLGAIRLPNSVFKNTGAEVTSDIVFFKKGVDEATNQSFTKAMPYYDKIIDSLDDNTLFA  1200
             TFLGAIRLPNSVFK TGAEVTSDIVFFKKGVD ATNQSFTKAMPYYDKII++LDD+TLFA
Sbjct  1131  TFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFA  1190

Query  1201  LQNNRFDSFIPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYKEQDYKIIKDFIDK  1260
             LQNNRFDSFIPSDQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGYKEQDY IIKDF+DK
Sbjct  1191  LQNNRFDSFIPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDK  1250

Query  1261  VGENNINLNEQTLNEYFIRHPENILGNLSLEKTRYSFEINGEQIYKYELQALEDKSLNLS  1320
             VGENNI+LNEQTLNEYFI+HPENILG+LSLEKTRYS E+NGEQIYKYELQALEDKSL+LS
Sbjct  1251  VGENNIHLNEQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLS  1310

Query  1321  QALNQAIEKLPKNVYQYHKTTLKTDALIIDANNERYEEVQKLIKNLERGELVKWDNLYFQ  1380
             QALNQAIEKLPK VYQYHKTTLKTD+LIID+NNERY+EVQKLIKNLERGELVKWD+LYFQ
Sbjct  1311  QALNQAIEKLPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQ  1370

Query  1381  LEQNNEIGIFLKPTKINSKIQDSRLKAYFKIKDALNDLTSAelsplssdlelesKRVRLN  1440
             LEQNNE GIFL+PTKINSK QDSRLKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LN
Sbjct  1371  LEQNNERGIFLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLN  1430

Query  1441  LVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAK  1500
             LVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAK
Sbjct  1431  LVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAK  1490

Query  1501  KAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIRDHFTTQSLETTIKELLEQK  1560
             KAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFI+DHFTTQSLETTIKELLEQK
Sbjct  1491  KAQIFFERTLNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQK  1550

Query  1561  LIYKDHKDNGDYVLANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATE  1620
             LIYKDHKDNG+Y+LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATE
Sbjct  1551  LIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATE  1610

Query  1621  IMANINSPWIPTQYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEDIKVEHLSGAYEVFA  1680
             IMANINSPWIPTQYLEEFL+EL+ANHYEKQYGDKMTDYQLGNLKEDIKVEHL+GAYEV  
Sbjct  1611  IMANINSPWIPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSI  1670

Query  1681  RNNELNELYGIRHKDKAHSYKVPFESLLNKVLNNKDLSVKYAQSDPNDPKKEIFITDEEQ  1740
             R+NELNELYGIRHKD+AHSYK PFESLLNKVLNNKDLSVKYAQ DPNDPKKEIFITDEEQ
Sbjct  1671  RSNELNELYGIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQ  1730

Query  1741  SNLARQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHIS  1800
             SNLA+QKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I 
Sbjct  1731  SNLAKQKAEELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIK  1790

Query  1801  LRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQW  1860
             LRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQW
Sbjct  1791  LRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQW  1850

Query  1861  GDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIee  1920
             GDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEE
Sbjct  1851  GDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEE  1910

Query  1921  lkeeelvnaeknFERQELAYKNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDIS  1980
             LKEEELVNAEKNFERQELAY+NNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDIS
Sbjct  1911  LKEEELVNAEKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDIS  1970

Query  1981  QMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLYIKTRYLHQNNKKIMFLT  2040
             QMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDL+IKTRYLHQN+KKIM+LT
Sbjct  1971  QMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLT  2030

Query  2041  GTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRF  2100
             GTPIANSLSEMYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRF
Sbjct  2031  GTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRF  2090

Query  2101  SKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVAD  2160
             SKFSDVQGLSTMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVAD
Sbjct  2091  SKFSDVQGLSTMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVAD  2150

Query  2161  ENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSY  2220
             ENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSY
Sbjct  2151  ENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSY  2210

Query  2221  AMAKNIYENYLETNAVKGTQLGFIGLSTPKTHSQKVSLEAPDNAHEIENKNPLDEAQELL  2280
             AMA NIYENYLETNA KGTQLGFIGLSTPKTHSQKVSLEA DNAHE ENKNPLDEAQELL
Sbjct  2211  AMAENIYENYLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELL  2270

Query  2281  ESLSSYDENGNLIAPSkkelenelkekkakSVDLDDELAKSTKFDVYSDVLRHLVQMGIP  2340
             ESLSSYDENGNLIAPSKKELENELKEK AKSV+LD+E+AK+  FDVYSDVLRHLVQMGIP
Sbjct  2271  ESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIP  2330

Query  2341  QNEIAFIHDAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRP  2400
             QNEIAFIHDAKTEEQKQDLFKK+NRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRP
Sbjct  2331  QNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRP  2390

Query  2401  DELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAH  2460
             DELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAH
Sbjct  2391  DELLQMEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAH  2450

Query  2461  KLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEES  2520
             KLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEE+
Sbjct  2451  KLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEEN  2510

Query  2521  LKNNSSKLDYLKQELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKEN  2580
             LKNN+S+ DYLKQELKDLETLQSS++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKEN
Sbjct  2511  LKNNASQWDYLKQELKDLETLQSSIIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKEN  2570

Query  2581  ASMSEELTHKKLKEQNKQIAQQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVN  2640
             ASMSEEL+HKKLKEQNKQIA+QNKEKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVN
Sbjct  2571  ASMSEELAHKKLKEQNKQIAEQNKEKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVN  2630

Query  2641  AYKTKYQVEFSLSPKDNPNIAYSPSNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAIT  2700
             AYKTKYQVEFSLSPKDNPN++YSPSNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAIT
Sbjct  2631  AYKTKYQVEFSLSPKDNPNVGYSPSNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAIT  2690

Query  2701  KLPEKVKECENSITNTKDNITKFTRLVEQKEEYPRLEYLQALKLDHRTLIDDLAKMSKDK  2760
             KLPEK+KE ENSI  T++NI+K+TRLVEQK  YPRLEYLQALK DH+TLIDDLAKMSKD+
Sbjct  2691  KLPEKIKELENSIETTQENIAKYTRLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDR  2750

Query  2761  DYKPVFNPKSQEVLEKMNAEKRASLENESLTEEIKEQANQEAHRPMKKASGGDYDMGM  2818
             DYKPVFNPKS+EVL ++NAEKRASLENES+TEEIKEQANQEAHRPMKKA+ +DYDMGM
Sbjct  2751  DYKPVFNPKSKEVLKNLNAEKRASLENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808

16) HPPC18_04955 in NC_017742


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3805 bits (14474),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2502/2825 (89%), Positives = 2655/2825 (94%), Gaps = 54/2825 (1%)

Query  6     NKKKLKELREQPNLFSILDDGDVINTTHYKQENTNTALEPTIELENGLKSQELALENQQD  65
             +KKK K+   QPNLFSILD+GD+                    +E++ + +E+     Q+
Sbjct  15    QKKKAKN--PQPNLFSILDNGDIATNNP---------------IEESDRVNEI-----QE  52

Query  66    PLPYVVKTQVNKTSMISRNPIEWARYLSFEKRIYKDNSKEDVKFFANGEIKESSRVYEAN  125
             PLPYVVKTQ+N + MISRNPIEWARYLSFE+R+ KDNSKEDV+FFANGEIKESSRVYEAN
Sbjct  53    PLPYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEAN  112

Query  126   KEGFERHITKRYDLIDTINNKEFFSKEIEVLTHTNSLEELKEQGLEIQLTHHNETHKKTL  185
              EGFER+ITKRYDLIDTI N+EFFS+EIE+LT TNSLEELKEQGLEIQLTHHNETHKKTL
Sbjct  113   EEGFERRITKRYDLIDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTL  172

Query  186   ENGNEIAKEYDYLKDIYREAERTKDGKLVREIIPSISSDEYFKLYNKLPFESInnentkl  245
             ENGNEI KEYDYLKDIY+E ERT+DGKLVREIIP++SSDEYFKLYNKLPFESINNENTKL
Sbjct  173   ENGNEIVKEYDYLKDIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKL  232

Query  246   ntndneeIKKLEFELAKEVHALILEQQLLSATNYYSWIDKDDYANFAWKIHRLINENKLK  305
             NTNDNEE+KKLEFELAKEVHALILEQQLLSAT+YY+WIDKDD ANFAWK+HRLINENKLK
Sbjct  233   NTNDNEEVKKLEFELAKEVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLK  292

Query  306   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAMQENRDYSLKSDLLSLEEIAQAKIELQK  365
             ENHLSADNANKIKQFFFNNGFILGWTKEEQSA+QENRDYSLKSDLLSLEEIAQAKIELQK
Sbjct  293   ENHLSADNANKIKQFFFNNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQK  352

Query  366   YYESVYVNGDGNQRDIKPFKEILRDINNFEKAYKQRYNELVSLNEAIIQAKEGSNERQNY  425
             YYESVYVNGDGN+R+IKPFKEILRD+NNFEKAY+QRYNELVSLNEAIIQAKE+SNERQ+ 
Sbjct  353   YYESVYVNGDGNKREIKPFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKS  412

Query  426   SAnnnntinntietntSivdniiqnndnnhlnlsladlELEQQNLGEPNGKERTNRADEP  485
             SANNNN INNTIETNTS      ++N++ +L+++    ELEQQNLGE NGKE+TNRADEP
Sbjct  413   SANNNNPINNTIETNTSNNIIKNNDNNHPNLSVADL--ELEQQNLGEKNGKEKTNRADEP  470

Query  486   IRARAGIPQEIHRRSEHGGQQEGVERSSDEELLHQDPNLFIEPREQGGTRGVHRSSDQQA  545
               +RAGIPQEIHRRSEHG +QEG+ERSSDEEL HQD++LFIEPREQG TRGV RSSDQQA
Sbjct  471   NGTRAGIPQEIHRRSEHGERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQA  530

Query  546   VSEKPHRERDRLHEHVFGGD----RVSARADGNGASSQASRMENGTRSEEKGDNPPNERG  601
             VS K+HRERDR+HEHV  GD    R  ARA++NGASS ASRMENG+RSEEKGDNP +ERG
Sbjct  531   VSKKSHRERDRIHEHVSRGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERG  590

Query  602   IpqppqspshqqnssRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNNEL  661
             IP+PPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNN EL
Sbjct  591   IPRPPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNREL  650

Query  662   DKSSDRANENGDRSPRQNGSANQESARGERYGIAPGSSNQSVLLPAQSRLHLAGLSAPNG  721
             D+SSDRANENGDRSPRQNGSANQE+ARGER+GIAP SSNQSVL  AQSRLH AGLS+PNG
Sbjct  651   DNSSDRANENGDRSPRQNGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNG  710

Query  722   LRDLEENRDQEGRllsnlnhlesllnAIRNNTIASEPDFRSRLLEAIYHNEPLKDSIVGT  781
             L  LEENRDQ   LLSNL+HLESLLNAIRNNTIASEPDFRSRLLEAI +NEPLKDS+VG+
Sbjct  711   LGSLEENRDQKRGLLSNLDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGA  770

Query  782   QLLKDPTTKIFYDKFQLRISPKKVLEILENRIQKSIETTNEALNAFNAPDSQAIDGNAIS  841
             QLLKDPTTKIFYDKFQL+ISPKKVLEILENR++KSIETTNEALNAFNA DSQAID NAIS
Sbjct  771   QLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAIS  830

Query  842   NNDVELNPTQESEITDKSAGLNNAqeqttqeqttqeqttqeqttqeqttqeqttqeqttq  901
             N+ + LNPTQES ITD+S  LNNAQEQT+QEQ TQ ++                      
Sbjct  831   NS-IGLNPTQESKITDNSVELNNAQEQTAQEQDTQKNAPT--------------------  869

Query  902   eqttqSLPIPLNPKMDFKPSEEVLIKGAKTRYKANIEAIKLLKELQAKQEISKGDYYATL  961
                  + +IPLNPK+DFKPSEEVLIKGAKTRYKANI AI LLKELQAKQEI KGDYYATL
Sbjct  870   -----TPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATL  924

Query  962   KEQEILAQFSGWGGLESYFKKDQRPKEFEELKALLTKDEFRRAYSSTRDAYYTPKLVIDS  1021
             KEQEILAQFSGWGGLESYFKK Q P EF EL+ALLTKDEFRRAY S+RDAYYTPKLVIDS
Sbjct  925   KEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDAYYTPKLVIDS  984

Query  1022  IYQALDRLGFNQNNHPKEIFEPSLGTGKFIAHAPSDKNYRFVGTELDPISANISQFLYPN  1081
             IYQAL++LGFN++NH KEIFEPSLGTGKFIAHAPSDKNYRF+GTELDPISA+ISQFLYPN
Sbjct  985   IYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASISQFLYPN  1044

Query  1082  QVIQNTALENHPFHQDYDAFVGNPPYGNHKIYSSNDAELSNESVHNYFLGKAIKELKDDG  1141
             QVIQNTALENH F QDYDAFVGNPPYGNHKIYS  D ELSNESVHNYFLGKAIKELKDDG
Sbjct  1045  QVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAIKELKDDG  1104

Query  1142  IGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDEA  1201
             IGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVD A
Sbjct  1105  IGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFFKKGVDKA  1164

Query  1202  TNQSFTKAMPYYDKILNSLDDETLFALQNNRFDSFIPSDQLKIVIAIANHFGFKQEKLQR  1261
             TNQSFTKAMPYYDKI+N+LDD+TLFALQNNRFDSFIPSDQLKIV AIA+HFGF+QEKLQR
Sbjct  1165  TNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGFQQEKLQR  1224

Query  1262  WYEKIDTTNFGYSAQDYKIIKDFMDKVGENNINLNEQTLNEYFIHHPENILGRLSLEKTR  1321
             WYEKIDT+NFGY  QDY IIKDFMDKVGENNI+LNEQTLNEYFIHHPENILG+LSLEKTR
Sbjct  1225  WYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENILGHLSLEKTR  1284

Query  1322  YSSEINGEQIYKYELQALEDESLDLSQALSQAIEKLPKDVYQYHKTTLKTDALIIDPSNE  1381
             YSSE+NGEQIYKYELQALED SLDLSQAL+QAIEKLPK+VYQYHKTTLKTD+LIID +NE
Sbjct  1285  YSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDTLIIDTNNE  1344

Query  1382  RYQEVQKLIKNLERGELVKWDNLYYKLEQDNEIGIFLRPTKINSKAQDSRLKAYLKIKDA  1441
             RYQEVQKLIKNLERGELVKWD+LY++LEQ+NE GIFLRPTKINSKAQDSRLKAY+KIKDA
Sbjct  1345  RYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSRLKAYFKIKDA  1404

Query  1442  LNGLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGL  1501
             LN+LTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGL
Sbjct  1405  LNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLYGAKVLGL  1464

Query  1502  EKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGG  1561
             EKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKG 
Sbjct  1465  EKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGC  1524

Query  1562  LDLHFIRDHFKTQSLETTIKELLEQKLIYKDHKDNGDYILANDYLSGNVKRKLKEAKEAI  1621
             LDLHFI+DHF TQSLETTIKELLEQKLIYKDHKDNG+YILANDYLSGNVKRKLKE KEAI
Sbjct  1525  LDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKLKEVKEAI  1584

Query  1622  NQGVEGLEANLKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDK  1681
             NQGVEGLEAN+KDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDK
Sbjct  1585  NQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHYEKQYGDK  1644

Query  1682  MTDYQLENLKEKIKVEHLNGAYEVSIRSDELNELYGIRHKDKPHSYKVPFESLLNRVLNN  1741
             MTDYQL NLKE IKVEHLNGAYEVSIRS+ELNELYGIRHKD++HSYK PFESLLN+VLNN
Sbjct  1645  MTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPFESLLNKVLNN  1704

Query  1742  RDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYARRTHLEQIYN  1801
             +DLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDYARRTHLEQIYN
Sbjct  1705  KDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYARRTHLEQIYN  1764

Query  1802  DTFNNLVLKTYDGSQLELEGFNQYIKLRPHQKNAIFRTIQDRSVCLDHQVGAGKTLCAIA  1861
             DTFNNLVLKTYDGSQLELEGFN+ IKLRPHQKNAIFRTIQDR+VCLDHQVGAGKTLCAIA
Sbjct  1765  DTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIA  1824

Query  1862  SCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVGSKDTTEKERELLFNQIA  1921
             SCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVV+SKD TEKERELLFNQIA
Sbjct  1825  SCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIA  1884

Query  1922  NNNYDAVIIVHTHLELLSNPRGIIeelkeeelvnaeknFERQELAYKNNPRETKKPNERA  1981
             NNNYDAVII HTHLELLSNPRGIIEELKEEELVNAEKNFERQELAY+NNPRETKKPNERA
Sbjct  1885  NNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYQNNPRETKKPNERA  1944

Query  1982  FKNKLDKIRAQYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQ  2041
             FKNKLDKIRA+YDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQ
Sbjct  1945  FKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQ  2004

Query  2042  GSNRARDLFIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDW  2101
             GSNRARDLFIKTRYLHQN+KKIM+LTGTPIANSLSEMYHLQRYLTP+VLKERGLEFFDDW
Sbjct  2005  GSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLKERGLEFFDDW  2064

Query  2102  AKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVP  2161
             AKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDDILKHNPHFVP
Sbjct  2065  AKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDDILKHNPHFVP  2124

Query  2162  KVYGDKPINVVVKRSEEVAQFIGVALENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTT  2221
             KVYGDKPINVVVKRSEEVAQFIGVA ENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTT
Sbjct  2125  KVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQDNILSCTT  2184

Query  2222  DARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFIGLSTPKTHSQ  2281
             DARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLETNATKGTQLGFIGLSTPKTHSQ
Sbjct  2185  DARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLETNATKGTQLGFIGLSTPKTHSQ  2244

Query  2282  KVSLEVVDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSkkelenelkekeakSVNL  2341
             KVSLE +DNAHE ENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNL
Sbjct  2245  KVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNL  2304

Query  2342  DEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKRVNRGEVRVLLGS  2401
             DEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFK++NRGEVRVLLGS
Sbjct  2305  DEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGEVRVLLGS  2364

Query  2402  PAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYAT  2461
             PAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYAT
Sbjct  2365  PAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRMKIYRYAT  2424

Query  2462  EKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEV  2521
             EKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEV
Sbjct  2425  EKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEV  2484

Query  2522  KLRAEIKSEESKYKAFNKEHYFNEESLKNNASKLDYLKQELKDLETLQRSVIIPTHTEIK  2581
             KLRAEIKSEE+KYKAF+KE+YFNEE+LKNNAS+ DYLKQELKDLETLQ S+IIPTHTEIK
Sbjct  2485  KLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQELKDLETLQSSIIIPTHTEIK  2544

Query  2582  LYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNKEKLDAIKKQF  2641
             LYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNKEKLD+IKKQF
Sbjct  2545  LYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKLDTIKKQF  2604

Query  2642  ASNLNTLFLNEEEDYKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNIAYSPNNMIYKNDTG  2701
             ASNLN LF+NEE D KLLEYKGFVVNAYKTKYQVEFSLSPKDNPN++YSP+NM+YKNDT+
Sbjct  2605  ASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSPSNMVYKNDTA  2664

Query  2702  NMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIETTKENISKYTRLVEQKLPYP  2761
             NMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSIETT+ENI+KYTRLVEQK +YP
Sbjct  2665  NMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYTRLVEQKPSYP  2724

Query  2762  RLEYLKALKLDHKTLIDDLAKMGRDRDYKPAFNPKSKEVLEKMNAEKRASLENEREEQGV  2821
             RLEYL+ALK DHKTLIDDLAKM++DRDYKP FNPKSKEVL ++NAEKRASLENE   + +
Sbjct  2725  RLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLENESVTEEI  2784

Query  2822  KGNTK  2826
             K +++
Sbjct  2785  KEQAN  2789

17) HPSH112_06985 in NC_017741


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3469 bits (13193),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2204/2374 (93%), Positives = 2319/2374 (98%), Gaps = 8/2374 (0%)

Query  246   LSIADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGQQEGVERSSDEEL  305
             LS+ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG +QEG+ERSSDEEL
Sbjct  443   LSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEGMERSSDEEL  502

Query  306   LHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDKLHEHVSRGDGVSARADTRADS  365
              HQDSSLFIEPREQG TRGVYRSSDQQAVS KSHRERD++HEHVSRGDG+SARA++RA+S
Sbjct  503   SHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGISARAEARANS  562

Query  366   NGASSQASRMENGARSEEKGDNPSDERGVSPTPQSPSHQQNSSRDLGLSLSREQPGQTGR  425
             NGASS ASRMENGARSEEKGDNP+DERG++  PQSPSHQQNSSRDLGLSLSREQPGQTGR
Sbjct  563   NGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLSREQPGQTGR  622

Query  426   LRLFDHGQMGSLFPTDHENQRSKNDNELDRSSNRTNENGDKSPRQNGSANQESARSERYG  485
             LRLFDHGQMGSLFPTDHENQRS+N+ ELD SS+R+NENGD+SPRQNGSANQE+AR+ER+G
Sbjct  623   LRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQEGARGERFG  682

Query  486   IAQGSSSQSVLPLAQSRLHHAGLSTPNGLGNLEEDRDQERGllsnldhlesllnAIRNNT  545
             IA  SS+QSVLPLAQSRLHHAGLSTPNGLG+LEE+RDQ RGLLSNLDHLESLLNAIRNNT
Sbjct  683   IAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLESLLNAIRNNT  742

Query  546   IASEPDFRTRLLEAIQNNEPLKDSIVGMQLLKDPTTKIFYDKFQLKISPKKVLEILENRI  605
             IASEPDFR+RLLEAIQNNEPLKDS+VG QLLKDPTTKIFYDKFQLKISPKKVLEILENR+
Sbjct  743   IASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKKVLEILENRL  802

Query  606   KKSIETANETLNAFNALDSQAIDGNAISNSVGLNPTQESGITDNSVELnnaqeqtaqeqd  665
             KKSIET+NE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVELNNAQEQTAQEQD
Sbjct  803   KKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNAQEQTAQEQD  862

Query  666   tqenaqttIKQETPTAPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE  725
                      ++++PT+PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE
Sbjct  863   --------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE  914

Query  726   ILKGDYYATQEEQKILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDEFRRAYSSTRDA  785
             ILKGDYYAT  EQ ILAQFSGWGGLESYFKK Q PEEFKELNALLTKDEFRRAY S+RDA
Sbjct  915   ILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDA  974

Query  786   YYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS  845
             YYTPKLVIDSIYQ+L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS
Sbjct  975   YYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS  1034

Query  846   ANISKFLYPNQVINNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKELSNESVHNYFLG  905
             A+IS+FLYPNQVI+NTALENHQFYQ+YDAFVGNPPYG+HKIYS  DKELSNESVHNYFLG
Sbjct  1035  ASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLG  1094

Query  906   KAIKELKDDGIGAFVVSSWFMDGKNPKMREHIAQNTTFLGAIRLPNSVFKATGAEVSSDI  965
             KAIKELKDDGIGAFVVSSWFMD+KNPKMREHIA+N+TFLGAIRLPNSVFKATGAEV+SDI
Sbjct  1095  KAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDI  1154

Query  966   VFFKKGVDGATNQSFTKAMPYYDKIIDSLDNDTLFALQNNRFDSFTPSDQLKIVNAIASH  1025
             VFFKKGVD ATNQSFTKAMPYYDKII++LD+DTLFALQNNRFDSF PSDQLKIVNAIASH
Sbjct  1155  VFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASH  1214

Query  1026  FGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINLNEQTLNEYFIHHPENI  1085
             FGF+QEKLQRWYEKIDTANFGY+EQDY IIK+F+DKVGENNI+LNEQTLNEYFIHHPENI
Sbjct  1215  FGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENI  1274

Query  1086  LGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALHQAIEKLPKDVYQYHKTTFKT  1145
             LGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQAL+QAIEKLPK+VYQYHKTT+KT
Sbjct  1275  LGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKT  1334

Query  1146  DALIIDANNERYQEVQKLIKNLERGELVKWDNLYFQLEQNNERGIFLKPTKINSKVQDSR  1205
             D+LIID+NNERYQEVQKLIKNLERGELVKWD+LYFQLEQNNERGIFL+PTKINSK QDSR
Sbjct  1335  DTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSR  1394

Query  1206  LKAYFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYLNENKNRKDIKQ  1265
             LKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYLNENKNRKDIKQ
Sbjct  1395  LKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQ  1454

Query  1266  DLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1325
             DLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA
Sbjct  1455  DLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1514

Query  1326  LIASINQKGGLNLHFIRDHFATQSLETTIKELLEQKLIYKDHKDNGDYVLANDYLSGNVK  1385
             LIASINQKG L+LHFI+DHF+TQSLETTIKELLEQKLIYKDHKDNG+Y+LANDYLSGNVK
Sbjct  1515  LIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVK  1574

Query  1386  RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLIELAA  1445
             RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFL+EL+A
Sbjct  1575  RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSA  1634

Query  1446  NHYEKQYGDKMTDYQLGNLKEGIKVEHLSGAYEVLVRNNELNELYGIRHKDKPHSYKAPF  1505
             NHYEKQYGDKMTDYQLGNLKE+IKVEHL+GAYEV +R+NELNELYGIRHKD++HSYKAPF
Sbjct  1635  NHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPF  1694

Query  1506  ESLLIKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYT  1565
             ESLL KVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDY+
Sbjct  1695  ESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYA  1754

Query  1566  RRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTIQDRAVCLDHQV  1625
             RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTIQDRAVCLDHQV
Sbjct  1755  RRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQV  1814

Query  1626  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1685
             GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK
Sbjct  1815  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1874

Query  1686  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknFERQELAYKNNP  1745
             ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAY+NNP
Sbjct  1875  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYQNNP  1934

Query  1746  RETKKPNERAFKSKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1805
             RETKKPNERAFK+KLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM
Sbjct  1935  RETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1994

Query  1806  EKIAGLGNQQGSNRARDLLIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLE  1865
             EKIAGLGNQQGSNRARDL+IKTRYLHQN+KKIM+LTGTPIANSLSEMYHLQRYLTP+VL 
Sbjct  1995  EKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLK  2054

Query  1866  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDD  1925
             ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDD
Sbjct  2055  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDD  2114

Query  1926  ILKHNPHFVPKVYGDKPINVVVKRSQEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  1985
             ILKHNPHFVPKVYGDKPINVVVKRS+EVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK
Sbjct  2115  ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  2174

Query  1986  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFI  2045
             GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLETNATKGTQLGFI
Sbjct  2175  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLETNATKGTQLGFI  2234

Query  2046  GLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSkkelenel  2105
             GLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL
Sbjct  2235  GLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL  2294

Query  2106  kekeakSVNLDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKIN  2165
             KEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKK+N
Sbjct  2295  KEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLN  2354

Query  2166  RGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2225
             RG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN
Sbjct  2355  RGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2414

Query  2226  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2285
             FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA
Sbjct  2415  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2474

Query  2286  TGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKNNSSKLDYLKQELKDLETLQSS  2345
             TGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLKNN+S+ DYLKQELKDLETLQSS
Sbjct  2475  TGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQELKDLETLQSS  2534

Query  2346  VMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNK  2405
             ++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNK
Sbjct  2535  IIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNK  2594

Query  2406  EKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLNPKDNPNIAYSP  2465
             EKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL+PKDNPN++YSP
Sbjct  2595  EKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSP  2654

Query  2466  SNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIKITQENIAKYT  2525
             SNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSI  TQENIAKYT
Sbjct  2655  SNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYT  2714

Query  2526  RLVEQKPPYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEVLEKMNAEKRAS  2585
             RLVEQKP+YPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS+EVL ++NAEKRAS
Sbjct  2715  RLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRAS  2774

Query  2586  LENEGVTEEIKEQAKEEVHRPMKKASSGDYDMGM  2619
             LENE+VTEEIKEQA++E HRPMKKA+++DYDMGM
Sbjct  2775  LENESVTEEIKEQANQEAHRPMKKAANDDYDMGM  2808


 Score =  287 bits (1073),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 189/212 (90%), Positives = 200/212 (95%), Gaps = 2/212 (0%)

Query  1    MQKKKAKNPQPNLFSILDNGDIATNNLAEESDKVNETQEPLPYVVKTQINTARMISRNPI  60
            MQKKKAKNPQPNLFSILDNGDIATNN  EESD+VNE QEPLPYVVKTQINTARMISRNPI
Sbjct  14   MQKKKAKNPQPNLFSILDNGDIATNNPIEESDRVNEIQEPLPYVVKTQINTARMISRNPI  73

Query  61   EWARYLSFERRVHKDNSREDVNFFANGEIKESSRVYEANEKGFERRITKKYDLID--RNK  118
            EWARYLSFERRVHKDNS+EDVNFFANGEIKESSRVYEANE GFERRITK+YDLID  RN+
Sbjct  74   EWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDTIRNR  133

Query  119  EFFSKEIDILTYKNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIYHEVE  178
            EFFS+EI+ILTY NSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIY+EVE
Sbjct  134  EFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIYQEVE  193

Query  179  RTKTGELVRGIIPSISSAEYFKLYNKLPFESI  210
            RT+ G LVR IIP++SS EYFKLYNKLPFESI
Sbjct  194  RTQDGKLVREIIPNLSSDEYFKLYNKLPFESI  225

18) HPAKL117_02240 in NC_019560


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3437 bits (13073),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2195/2366 (93%), Positives = 2297/2366 (98%), Gaps = 14/2366 (0%)

Query  272   ADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGLQEGVERSSDEELLHQ  331
             ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG  QEG+ERSSDEEL HQ
Sbjct  446   ADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEGMERSSDEELSHQ  505

Query  332   DSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDRLHEHVSRGDGVSARAD----SNGA  387
             DSSLFIEPREQG TRGVYRSSDQQAVS KSHRERDR+HEHVSRGDG+SARA+    SNGA
Sbjct  506   DSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGISARAEARANSNGA  565

Query  388   SSQASRMENGARSEEKGDNPSDERGVSQTPQSPSHQQNSSRDLGLSLSREQPGQTGRLRL  447
             SS ASRMENGARSEEKGDNP+DERG+++ PQSPSHQQNSSRDLGLSLSREQPGQTGRLRL
Sbjct  566   SSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLSREQPGQTGRLRL  625

Query  448   FNHGQMGSLFPTDHENQRSKNDNELDRSSDRANENGDKSPRQNGSANQESARSERYGIAQ  507
             F+HGQMGSLFPTDHENQRS+N+ ELD SSDRANENGD+SPRQNGSANQE+AR+ER+GIA 
Sbjct  626   FDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQEGARGERFGIAP  685

Query  508   GSSSQSVLPLAQSRLHHAGLSAPNGLGNLEEDRDQERGllsnldhlesllnAIRNNTIAS  567
              SS+QSVLPLAQSRLHHAGLS+PNGLG+LEE+RDQ RGLLSNLDHLESLLNAIRNNTIAS
Sbjct  686   RSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLESLLNAIRNNTIAS  745

Query  568   EPDFRSRLLEAIQNNEPLKDSIVGMQLLKDPMTKVFYDKFQLKISPKKVLEILENRIKKS  627
             EPDFRSRLLEAIQNNEPLKDS+VG QLLKDP TK+FYDKFQLKISPKKVLEILENR+KKS
Sbjct  746   EPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKKVLEILENRLKKS  805

Query  628   IETANETLNAFNVLDSQAIDLNAISNSVGLNPTQESVITDNSVELnnaqeqtaqeqdtqe  687
             IET+NE+LNAFN LDSQAIDLNAISNS+GLNPTQES ITDNSVELNNAQEQTAQEQD   
Sbjct  806   IETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNAQEQTAQEQD---  862

Query  688   naqttIKQETPTAPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILK  747
                   ++++PT+PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILK
Sbjct  863   -----TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQEILK  917

Query  748   GDYYATQEEQEILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDEFRRAYLSARDAYYT  807
             GDYYAT  EQEILAQFSGWGGLESYFKK Q PEEFKELNALLTKDEFRRAYLSARDAYYT
Sbjct  918   GDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDAYYT  977

Query  808   PKLVIDSIYHGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISANI  867
             PKLVIDSIY++L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISA+I
Sbjct  978   PKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISASI  1037

Query  868   SKFLYPNQVIKNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKELSNESVHNYFLGKSI  927
             S+FLYPNQVI+NTALENHQFYQ+YDAFVGNPPYG+HKIYS  DKELSNESVHNYFLGK+I
Sbjct  1038  SQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLGKAI  1097

Query  928   KELKDDGIGAFVVSSWFMDGKNPKMREHIAQNATFLGAIRLPNSVFKATGAEVSSDIVFF  987
             KELKDDGIGAFVVSSWFMD+KNPKMREHIA+NATFLGAIRLPNSVFKATGAEV+SDIVFF
Sbjct  1098  KELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDIVFF  1157

Query  988   KKGVDEATNQSFTKAMPYYDKIIDSLNDDTLFALQNNRFDSFTPSDQLKIVNAIASHFGF  1047
             KKGVD ATNQSFTKAMPYYDKII++L+DDTLFALQNNRFDSF PSDQLKIVNAIASHFGF
Sbjct  1158  KKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASHFGF  1217

Query  1048  QQEKLQRWYEKIDTANFGYKEQDYKIIKGFIDKVGENNINLNEQTLNEYFIHHPENILGH  1107
             QQEKLQRWYEKIDTANFGYKEQDY IIK+F+DKVGENNI+LNEQTLNEYFIHHPENILGH
Sbjct  1218  QQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENILGH  1277

Query  1108  LSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDAL  1167
             LSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTD+L
Sbjct  1278  LSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKTDTL  1337

Query  1168  IIDANNERYQEIQKLIKNLERGELVKWDNLYFQLEQNNEMGIFLKPTKINSKVQDSRLKA  1227
             IID+NNERYQE+QKLIKNLERGELVKWD+LYFQLEQNNE GIFL+PTKINSK QDSRLKA
Sbjct  1338  IIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSRLKA  1397

Query  1228  YFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYLNENKNRKDIKQDLY  1287
             YFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYLNENKNRKDIKQDLY
Sbjct  1398  YFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQDLY  1457

Query  1288  GAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIA  1347
             GAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIA
Sbjct  1458  GAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIA  1517

Query  1348  SINQKGCLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDNGDYVLANDYLSGNVKRKL  1407
             SINQKGCLDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKDNG+Y+LANDYLSGNVKRKL
Sbjct  1518  SINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVKRKL  1577

Query  1408  KEVKEAINQGVEGLEINLKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLIELSANHY  1467
             KEVKEAINQGVEGLE N+KDLELIIPKDLKATEIMANINSPWIPTQYLEEFL+ELSANHY
Sbjct  1578  KEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSANHY  1637

Query  1468  EKQYGDKMTDYQLGNLKEDIKVEHLSGAYEVFARNNELNELYGIRHKDKPHSYKVPFESL  1527
             EKQYGDKMTDYQLGNLKEDIKVEHL+GAYEV  R+NELNELYGIRHKD++HSYK PFESL
Sbjct  1638  EKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPFESL  1697

Query  1528  LNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYARRT  1587
             LNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDYARRT
Sbjct  1698  LNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYARRT  1757

Query  1588  HLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTIQDRAVCLDHQVGAG  1647
             HLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTIQDRAVCLDHQVGAG
Sbjct  1758  HLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQVGAG  1817

Query  1648  KTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERE  1707
             KTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERE
Sbjct  1818  KTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEKERE  1877

Query  1708  LLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknFERQELAYKNNPRET  1767
             LLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAY+NNPRET
Sbjct  1878  LLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYQNNPRET  1937

Query  1768  KKPNERAFKNKLDKIRAQYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKI  1827
             KKPNERAFKNKLDKIRA+YDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKI
Sbjct  1938  KKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKI  1997

Query  1828  AGLGNQQGSNRARDLFIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERG  1887
             AGLGNQQGSNRARDLFIKTRYLHQN+KKIM+LTGTPIANSLSEMYHLQRYLTP+VLKERG
Sbjct  1998  AGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLKERG  2057

Query  1888  LEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDDILK  1947
             LEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDDILK
Sbjct  2058  LEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDDILK  2117

Query  1948  HNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGPIIDRMQKCESKKSKKGQD  2007
             HNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEG+IIDRMQKCE+KKSKKGQD
Sbjct  2118  HNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKKGQD  2177

Query  2008  NILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFIGLS  2067
             NILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLETNATKGTQLGFIGLS
Sbjct  2178  NILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLETNATKGTQLGFIGLS  2237

Query  2068  TPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSkkelenelkek  2127
             TPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEK
Sbjct  2238  TPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEK  2297

Query  2128  eakSVNLDEEIAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKNINRGE  2187
             EAKSVNLDEEIAKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFK++NRGE
Sbjct  2298  EAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLNRGE  2357

Query  2188  VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRM  2247
             VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRM
Sbjct  2358  VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPENFRM  2417

Query  2248  KIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGN  2307
             KIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGN
Sbjct  2418  KIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGN  2477

Query  2308  PLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKNNSSKLDYLKQELKDLETLQSAVMI  2367
             PLIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLKNN+S+ DYLKQELKDLETLQS+++I
Sbjct  2478  PLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQELKDLETLQSSIII  2537

Query  2368  PTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNKEKL  2427
             PTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNKEKL
Sbjct  2538  PTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNKEKL  2597

Query  2428  DAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLNPKDNPNIAYSPSNM  2487
             D+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL+PKDNPN++YSPSNM
Sbjct  2598  DTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSPSNM  2657

Query  2488  VYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIKITQENIAKYTRLV  2547
             VYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSI  TQENIAKYTRLV
Sbjct  2658  VYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYTRLV  2717

Query  2548  EQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEVLEKMNAEKRASLEN  2607
             EQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS+EVL ++NAEKRASLEN
Sbjct  2718  EQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRASLEN  2777

Query  2608  ESKEMTEIKNSNKEQEIKRDIKSNDE  2633
             ES  +TE  + + +QE  R +K   +
Sbjct  2778  ES--VTEEIKEQANQEAHRPMKKAAN  2801


 Score =  256 bits (957),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 173/216 (81%), Positives = 187/216 (87%), Gaps = 13/216 (6%)

Query  16   EPNLFSILDDGDVINTSSYKQEPEPQIKEPQSSATQNPNKEQETPNYVVKTQINTARMIS  75
            +PNLFSILD+GD+   ++  +             ++  N  QE   YVVKTQINTARMIS
Sbjct  23   QPNLFSILDNGDIATNNPIEE-------------SDRVNEIQEPLPYVVKTQINTARMIS  69

Query  76   RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDT  135
            RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDT
Sbjct  70   RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDT  129

Query  136  TRNKEFFSKEIEILTYTNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIY  195
             RN+EFFS+EIEILTYTNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIY
Sbjct  130  IRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIY  189

Query  196  QEVERTRDGELVREIIPSISSTEYFKLYNKLPFESI  231
            QEVERT+DG LVREIIP++SS EYFKLYNKLPFESI
Sbjct  190  QEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESI  225

19) HPSH112_01305 in NC_017741


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3432 bits (13051),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2187/2369 (93%), Positives = 2303/2369 (98%), Gaps = 10/2369 (0%)

Query  193   LSIADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGQQEGVERSSDEEL  252
             LS+ADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEHG +QEG+ERSSDEEL
Sbjct  443   LSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEHGERQEGMERSSDEEL  502

Query  253   LHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDKLHEHVSRGDGVSARADTRADS  312
              HQDSSLFIEPREQG TRGVYRSSDQQAVS KSHRERD++HEHVSRGDG+SARA++RA+S
Sbjct  503   SHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVSRGDGISARAEARANS  562

Query  313   NGASSQASRMENGARSEEKGDNPSDERGVSPTPQSPSHQQNSSRDLGLSLSREQPGQTGR  372
             NGASS ASRMENGARSEEKGDNP+DERG++  PQSPSHQQNSSRDLGLSLSREQPGQTGR
Sbjct  563   NGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRDLGLSLSREQPGQTGR  622

Query  373   LRLFDHGQMGSLFPTDHENQRSKNDNELDRSSNRTNENGDKSPRQNGSANQESARSERYG  432
             LRLFDHGQMGSLFPTDHENQRS+N+ ELD SS+R+NENGD+SPRQNGSANQE+AR+ER+G
Sbjct  623   LRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQNGSANQEGARGERFG  682

Query  433   IAQGSSSQSVLPLAQSRLHHAGLSTPNGLGNLEEDRDQERGllsnldhlesllnAIRNNT  492
             IA  SS+QSVLPLAQSRLHHAGLSTPNGLG+LEE+RDQ RGLLSNLDHLESLLNAIRNNT
Sbjct  683   IAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSNLDHLESLLNAIRNNT  742

Query  493   IASEPDFRTRLLEAIQNNEPLKDSIVGMQLLKDPTTKIFYDKFQLKISPKKVLEILENRI  552
             IASEPDFR+RLLEAIQNNEPLKDS+VG QLLKDPTTKIFYDKFQLKISPKKVLEILENR+
Sbjct  743   IASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQLKISPKKVLEILENRL  802

Query  553   KKSIETANETLNAFNALDSQAIDGNAISNSVGLNPTQESGITDNSVELnnaqeqtaqeqd  612
             KKSIET+NE+LNAFNALDSQAID NAISNS+GLNPTQES ITDNSVELNNAQEQTAQEQD
Sbjct  803   KKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNSVELNNAQEQTAQEQD  862

Query  613   tqenaqttIKQETPTAPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE  672
                      ++++PT+PAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE
Sbjct  863   --------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKANIKAIELLKELQAKQE  914

Query  673   ILKGDYYATQEEQKILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDEFRRAYSSTRDA  732
             ILKGDYYAT  EQ ILAQFSGWGGLESYFKK Q PEEFKELNALLTKDEFRRAY S+RDA
Sbjct  915   ILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALLTKDEFRRAYLSARDA  974

Query  733   YYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS  792
             YYTPKLVIDSIYQ+L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS
Sbjct  975   YYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPIS  1034

Query  793   ANISKFLYPNQVINNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKELSNESVHNYFLG  852
             A+IS+FLYPNQVI+NTALENHQFYQ+YDAFVGNPPYG+HKIYS  DKELSNESVHNYFLG
Sbjct  1035  ASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFYDKELSNESVHNYFLG  1094

Query  853   KAIKELKDDGIGAFVVSSWFMDGKNPKMREHIAQNTTFLGAIRLPNSVFKATGAEVSSDI  912
             KAIKELKDDGIGAFVVSSWFMD+KNPKMREHIA+N+TFLGAIRLPNSVFKATGAEV+SDI
Sbjct  1095  KAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLPNSVFKATGAEVTSDI  1154

Query  913   VFFKKGVDGATNQSFTKAMPYYDKIIDSLDNDTLFALQNNRFDSFTPSDQLKIVNAIASH  972
             VFFKKGVD ATNQSFTKAMPYYDKII++LD+DTLFALQNNRFDSF PSDQLKIVNAIASH
Sbjct  1155  VFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSFIPSDQLKIVNAIASH  1214

Query  973   FGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINLNEQTLNEYFIHHPENI  1032
             FGF+QEKLQRWYEKIDTANFGY+EQDY IIK+F+DKVGENNI+LNEQTLNEYFIHHPENI
Sbjct  1215  FGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLNEQTLNEYFIHHPENI  1274

Query  1033  LGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALHQAIEKLPKDVYQYHKTTFKT  1092
             LGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQAL+QAIEKLPK+VYQYHKTT+KT
Sbjct  1275  LGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEKLPKGVYQYHKTTLKT  1334

Query  1093  DALIIDANNERYQEVQKLIKNLERGELVKWDNLYFQLEQNNERGIFLKPTKINSKVQDSR  1152
             D+LIID+NNERYQEVQKLIKNLERGELVKWD+LYFQLEQNNERGIFL+PTKINSK QDSR
Sbjct  1335  DTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGIFLRPTKINSKAQDSR  1394

Query  1153  LKAYFKIKDALNDLTSAelsplssdlelesKRVRLNLVYDEFVKKFGYLNENKNRKDIKQ  1212
             LKAYFKIKDALNDLTSAEL+PLSSDLELE+KR +LNLVYDEFVKKFGYLNENKNRKDIKQ
Sbjct  1395  LKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKKFGYLNENKNRKDIKQ  1454

Query  1213  DLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1272
             DLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA
Sbjct  1455  DLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEA  1514

Query  1273  LIASINQKGGLNLHFIRDHFATQSLETTIKELLEQKLIYKDHKDNGDYVLANDYLSGNVK  1332
             LIASINQKG L+LHFI+DHF+TQSLETTIKELLEQKLIYKDHKDNG+Y+LANDYLSGNVK
Sbjct  1515  LIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDNGGYILANDYLSGNVK  1574

Query  1333  RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLIELAA  1392
             RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFL+EL+A
Sbjct  1575  RKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPWIPTQYLEEFLMELSA  1634

Query  1393  NHYEKQYGDKMTDYQLGNLKEGIKVEHLSGAYEVLVRNNELNELYGIRHKDKPHSYKAPF  1452
             NHYEKQYGDKMTDYQLGNLKE+IKVEHL+GAYEV +R+NELNELYGIRHKD++HSYKAPF
Sbjct  1635  NHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELYGIRHKDRAHSYKAPF  1694

Query  1453  ESLLIKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYT  1512
             ESLL KVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAEELKEAFKDWIYKDY+
Sbjct  1695  ESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAEELKEAFKDWIYKDYA  1754

Query  1513  RRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTIQDRAVCLDHQV  1572
             RRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LRPHQKNAIFRTIQDRAVCLDHQV
Sbjct  1755  RRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAIFRTIQDRAVCLDHQV  1814

Query  1573  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1632
             GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK
Sbjct  1815  GAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYPNANVLVVDSKDITEK  1874

Query  1633  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvnaeknFERQELAYKNNP  1692
             ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAY+NNP
Sbjct  1875  ERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFERQELAYQNNP  1934

Query  1693  RETKKPNERAFKSKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1752
             RETKKPNERAFK+KLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM
Sbjct  1935  RETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSM  1994

Query  1753  EKIAGLGNQQGSNRARDLLIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLE  1812
             EKIAGLGNQQGSNRARDL+IKTRYLHQN+KKIM+LTGTPIANSLSEMYHLQRYLTP+VL 
Sbjct  1995  EKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLSEMYHLQRYLTPEVLK  2054

Query  1813  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVSNDD  1872
             ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIV NDD
Sbjct  2055  ERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGLSTMYRAFADIVCNDD  2114

Query  1873  ILKHNPHFVPKVYGDKPINVVVKRSQEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  1932
             ILKHNPHFVPKVYGDKPINVVVKRS+EVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK
Sbjct  2115  ILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGSIIDRMQKCEGKKSKK  2174

Query  1933  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFI  1992
             GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMA NIYENYLETNATKGTQLGFI
Sbjct  2175  GQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYENYLETNATKGTQLGFI  2234

Query  1993  GLSTPKTHSQKVSLEALDNAHEIENKNPLDEAQELLESLSSYDENGNLIAPSkkelenel  2052
             GLSTPKTHSQKVSLEALDNAHE ENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL
Sbjct  2235  GLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDENGNLIAPSKKELENEL  2294

Query  2053  kekeakSVNLDEELAKGCKFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKIN  2112
             KEKEAKSVNLDEE+AKGC FDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKK+N
Sbjct  2295  KEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHDAKTEEQKQDLFKKLN  2354

Query  2113  RGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2172
             RG VRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN
Sbjct  2355  RGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGNILHQNDPEN  2414

Query  2173  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2232
             FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA
Sbjct  2415  FRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEA  2474

Query  2233  TGNPLIIEEVKLRAEIKNEEAKYKAFNKENYFNEENLKNNSSKLDYLKQELKDLETLQSS  2292
             TGNPLIIEEVKLRAEIK+EEAKYKAF+KENYFNEENLKNN+S+ DYLKQELKDLETLQSS
Sbjct  2475  TGNPLIIEEVKLRAEIKSEEAKYKAFHKENYFNEENLKNNASQWDYLKQELKDLETLQSS  2534

Query  2293  VMIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELTHKKLKEQNKQIAEQNK  2352
             ++IPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEEL+HKKLKEQNKQIAEQNK
Sbjct  2535  IIIPTHTEIKLYDLKNEESKDYELIKVKEVEPLKENASMSEELAHKKLKEQNKQIAEQNK  2594

Query  2353  EKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLNPKDNPNIAYSP  2412
             EKLD+IKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSL+PKDNPN++YSP
Sbjct  2595  EKLDTIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLSPKDNPNVGYSP  2654

Query  2413  SNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIKITQENIAKYT  2472
             SNMVYKNDTANMFSSYNFC+EIKFDGFLKRLDNAITKLPEKIKELENSI  TQENIAKYT
Sbjct  2655  SNMVYKNDTANMFSSYNFCAEIKFDGFLKRLDNAITKLPEKIKELENSIETTQENIAKYT  2714

Query  2473  RLVEQKPPYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEVLEKMNAEKRAS  2532
             RLVEQKP+YPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKS+EVL ++NAEKRAS
Sbjct  2715  RLVEQKPSYPRLEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSKEVLKNLNAEKRAS  2774

Query  2533  LENEGKEMTEIKNSNKEQEIKRDIKSDDE  2561
             LENE+  +TE  + + +QE  R +K   +
Sbjct  2775  LENES--VTEEIKEQANQEAHRPMKKAAN  2801


 Score =  216 bits (803),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 140/159 (89%), Positives = 150/159 (95%), Gaps = 2/159 (1%)

Query  1    MISRNPIEWARYLSFERRVHKDNSREDVNFFANGEIKESSRVYEANEKGFERRITKKYDL  60
            MISRNPIEWARYLSFERRVHKDNS+EDVNFFANGEIKESSRVYEANE GFERRITK+YDL
Sbjct  67   MISRNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDL  126

Query  61   ID--RNKEFFSKEIDILTYKNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLK  118
            ID  RN+EFFS+EI+ILTY NSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLK
Sbjct  127  IDTIRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLK  186

Query  119  DIYHEVERTKTGELVRGIIPSISSAEYFKLYNKLPFESI  157
            DIY+EVERT+ G LVR IIP++SS EYFKLYNKLPFESI
Sbjct  187  DIYQEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESI  225

20) HPOK113_0528 in NC_020508


> NC_011498_P1|11|G11|210134644|YP_002301083.1|Helicobacter_pylori_P12|+|9674..18100|-|HPP12_0447|DNA 
methylase
Length=2808

 Score = 3359 bits (12774),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 2197/2434 (91%), Positives = 2319/2434 (96%), Gaps = 27/2434 (1%)

Query  16    EPNLFSILDDGDVINTSSYKQEPEPQVKEPQSSATQNPNKEQETPNYVVKTQINTARMIS  75
             +PNLFSILD+GD+   ++  +             ++  N  QE   YVVKTQINTARMIS
Sbjct  23    QPNLFSILDNGDIATNNPIEE-------------SDRVNEIQEPLPYVVKTQINTARMIS  69

Query  76    RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERCITKRYDLIDT  135
             RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFER ITKRYDLIDT
Sbjct  70    RNPIEWARYLSFERRVHKDNSKEDVNFFANGEIKESSRVYEANEEGFERRITKRYDLIDT  129

Query  136   IRNKKFFSKEIDTLTYTNSLEELKEQGLEIQlthhhethkktleNGNEIAKEYDYLKDIY  195
             IRN+ FFS+EI+ LTYTNSLEELKEQGLEIQLTHH+ETHKKTLENGNEI KEYDYLKDIY
Sbjct  130   IRNREFFSREIEILTYTNSLEELKEQGLEIQLTHHNETHKKTLENGNEIVKEYDYLKDIY  189

Query  196   QEAERTKDGELVREIIPSISSAEYFKLYNKPPFESInnentklntndneeVKKLEFELAK  255
             QE ERT+DG LVREIIP++SS EYFKLYNK PFESINNENTKLNTNDNEEVKKLEFELAK
Sbjct  190   QEVERTQDGKLVREIIPNLSSDEYFKLYNKLPFESINNENTKLNTNDNEEVKKLEFELAK  249

Query  256   EVHILILEQNLLSATDYYSWIDKDDYASFAWKMHRLINEDKLKENHLSTDNANKIKQFFF  315
             EVH LILEQ+LLSATDYY+WIDKDD A+FAWKMHRLINE+KLKENHLS+DNANKIKQFFF
Sbjct  250   EVHALILEQQLLSATDYYPWIDKDDNANFAWKMHRLINENKLKENHLSADNANKIKQFFF  309

Query  316   DNGFILGWTKEEQSAMQENRDYSLRSALLSLEEIAQAKIELQKYYESVYVNGDGNKREIK  375
             +NGFILGWTKEEQSA+QENRDYSL+S LLSLEEIAQAKIELQKYYESVYVNGDGNKREIK
Sbjct  310   NNGFILGWTKEEQSAIQENRDYSLKSDLLSLEEIAQAKIELQKYYESVYVNGDGNKREIK  369

Query  376   PFKEILRDINNFEKAYKERYDKLVSLSAAIIQAKEGsneqqnsnannnntikntietntS  435
             PFKEILRD+NNFEKAY++RY+ LVSL+ AIIQAKE+SNE+Q+S+ANNNN I+NTIETNTS
Sbjct  370   PFKEILRDMNNFEKAYQQRYNELVSLNEAIIQAKESSNERQKSSANNNNPINNTIETNTS  429

Query  436   ignniiknndnnnpnLSVADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEH  495
                   ++N++ N  LSVADLELEQQNLGE+NGKE+TNRADEPN TRAGIPQEIHRRSEH
Sbjct  430   NNIIKNNDNNHPN--LSVADLELEQQNLGEKNGKEKTNRADEPNGTRAGIPQEIHRRSEH  487

Query  496   KGLQERVERSSDEELSHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDRLHEHVS  555
                QE +ERSSDEELSHQDSSLFIEPREQG TRGVYRSSDQQAVS KSHRERDR+HEHVS
Sbjct  488   GERQEGMERSSDEELSHQDSSLFIEPREQGRTRGVYRSSDQQAVSKKSHRERDRIHEHVS  547

Query  556   RGDGVSARAD----SNGASSQASRMENGARSEEKGDNPSDERRVSQTPQSSSHQQNSSRD  611
             RGDG+SARA+    SNGASS ASRMENGARSEEKGDNP+DER +++ PQS+SHQQNSSRD
Sbjct  548   RGDGISARAEARANSNGASSPASRMENGARSEEKGDNPGDERGIPRPPQSPSHQQNSSRD  607

Query  612   LGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRERNDNEPDKSSDRANENGDKSPRQ  671
             LGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQR +N+ E D+SSDRANENGD+SPRQ
Sbjct  608   LGLSLSREQPGQTGRLRLFDHGQMGSLFPTDHENQRSQNNRELDNSSDRANENGDRSPRQ  667

Query  672   NGSTNQEGARSERYGIAQGSPNQSVLPLAQSRLHHAGLSAPNGLGNLEENRDQKRRllsn  731
             NGS+NQEGAR+ER+GIA  S+NQSVLPLAQSRLHHAGLS+PNGLG+LEENRDQKR LLSN
Sbjct  668   NGSANQEGARGERFGIAPRSSNQSVLPLAQSRLHHAGLSTPNGLGSLEENRDQKRGLLSN  727

Query  732   ldhlesllnAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGIQLLKDPTTKIFYDKFQL  791
             LDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVG QLLKDPTTKIFYDKFQL
Sbjct  728   LDHLESLLNAIRNNTIASEPDFRSRLLEAIQNNEPLKDSLVGAQLLKDPTTKIFYDKFQL  787

Query  792   KISPKKVLEILENRIKKSIETTNETLNAFNALDSQDIDGNAISSSVGLNPIQENEIADNS  851
             KISPKKVLEILENR+KKSIETTNE+LNAFNALDSQ ID NAIS+S+GLNP QE+ I+DNS
Sbjct  788   KISPKKVLEILENRLKKSIETTNEALNAFNALDSQAIDLNAISNSIGLNPTQESKITDNS  847

Query  852   VELnntqeqtaqeqntqenaqttIKQETPTAPVIPLNPKIDFKPSEEVLIKGAKTRYKAN  911
             VELNN+QEQTAQEQ+         ++++PT+P IPLNPKIDFKPSEEVLIKGAKTRYKAN
Sbjct  848   VELNNAQEQTAQEQD--------TQKNAPTTPAIPLNPKIDFKPSEEVLIKGAKTRYKAN  899

Query  912   IKAIELLKELQAKQEILKGDYYATQEEQEILVQFSGWGGLESCFKKDQRPEEFKELNALL  971
             IKAIELLKELQAKQEILKGDYYAT  EQEIL QFSGWGGLES FKK Q PEEFKELNALL
Sbjct  900   IKAIELLKELQAKQEILKGDYYATLKEQEILAQFSGWGGLESYFKKAQCPEEFKELNALL  959

Query  972   TKDEFRRAYSSTRDAYYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPS  1031
             TKDEFRRAY S+RDAYYTPKLVIDSIYQ+L+QLGFNNDNHQKEIFEPSLGTGKFIAHAPS
Sbjct  960   TKDEFRRAYLSARDAYYTPKLVIDSIYQALNQLGFNNDNHQKEIFEPSLGTGKFIAHAPS  1019

Query  1032  DKNYRFMGTELDPISANISKFLYPNQVIQNTALENHQFYQEYDAFVGNPPYGSHKIYSSN  1091
             DKNYRFMGTELDPISA+IS+FLYPNQVIQNTALENHQFYQ+YDAFVGNPPYG+HKIYS  
Sbjct  1020  DKNYRFMGTELDPISASISQFLYPNQVIQNTALENHQFYQDYDAFVGNPPYGNHKIYSFY  1079

Query  1092  DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDGKNSKMREHIAQNATFLGAIRLP  1151
             DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMD+KN+KMREHIA+NATFLGAIRLP
Sbjct  1080  DKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDAKNPKMREHIAKNATFLGAIRLP  1139

Query  1152  NSVFKATGAEVSSDIVFFKKGVDEATNQSFTKAMPYYDKIIDSLDDDTLFALQNNRFDSF  1211
             NSVFKATGAEV+SDIVFFKKGVD ATNQSFTKAMPYYDKII++LDDDTLFALQNNRFDSF
Sbjct  1140  NSVFKATGAEVTSDIVFFKKGVDKATNQSFTKAMPYYDKIINGLDDDTLFALQNNRFDSF  1199

Query  1212  TPSDQLKIVNAIASHFGFKQEKLQRWYEKIDTANFGYKEQDYKIIKDFIDKVGENNINLN  1271
              PSDQLKIVNAIASHFGF+QEKLQRWYEKIDTANFGYKEQDY IIKDF+DKVGENNI+LN
Sbjct  1200  IPSDQLKIVNAIASHFGFQQEKLQRWYEKIDTANFGYKEQDYEIIKDFMDKVGENNIHLN  1259

Query  1272  EQTLNEYFIRHPENILGHLSLEKTRYSFEINGEQIYKYELQALEDKSLDLSQALNQAIEK  1331
             EQTLNEYFI+HPENILGHLSLEKTRYS E+NGEQIYKYELQALEDKSLDLSQALNQAIEK
Sbjct  1260  EQTLNEYFIHHPENILGHLSLEKTRYSSEVNGEQIYKYELQALEDKSLDLSQALNQAIEK  1319

Query  1332  LPKNVYQYHKTTLKTNALIIDANNERYEEVQKLIKNLERGELVKWDNLYFQLEQNNEMGV  1391
             LPK VYQYHKTTLKT++LIID+NNERY+EVQKLIKNLERGELVKWD+LYFQLEQNNE G+
Sbjct  1320  LPKGVYQYHKTTLKTDTLIIDTNNERYQEVQKLIKNLERGELVKWDDLYFQLEQNNERGI  1379

Query  1392  FLKPTKTNSKVQDSRLKAYFKIKDALNDLTSAELSPLSSDLELKSKRVRLNLVYDEFVKK  1451
             FL+PTK NSK QDSRLKAYFKIKDALNDLTSAEL+PLSSDLEL +KR +LNLVYDEFVKK
Sbjct  1380  FLRPTKINSKAQDSRLKAYFKIKDALNDLTSAELNPLSSDLELENKRAKLNLVYDEFVKK  1439

Query  1452  FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERT  1511
             FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAK+QNIEPRQAQAKKAQIFFERT
Sbjct  1440  FGYLNENKNRKDIKQDLYGAKVLGLEKDFEKEITPRSAKIQNIEPRQAQAKKAQIFFERT  1499

Query  1512  LNPKKELIITNAKEALIVSINQKGCLDLHFIRDHFTTQSLETTIKELLEQKLIYKDHKDN  1571
             LNPKKELIITNAKEALI SINQKGCLDLHFI+DHFTTQSLETTIKELLEQKLIYKDHKDN
Sbjct  1500  LNPKKELIITNAKEALIASINQKGCLDLHFIKDHFTTQSLETTIKELLEQKLIYKDHKDN  1559

Query  1572  GDYVLANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELVIPKDLKATEIMANTNSPW  1631
             G+Y+LANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLEL+IPKDLKATEIMAN NSPW
Sbjct  1560  GGYILANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKDLKATEIMANINSPW  1619

Query  1632  IPTQYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEDIKVEHLSGAYEVFARNNELNELY  1691
             IPTQYLEEFL+EL+ANHYEKQYGDKMTDYQLGNLKEDIKVEHL+GAYEV  R+NELNELY
Sbjct  1620  IPTQYLEEFLMELSANHYEKQYGDKMTDYQLGNLKEDIKVEHLNGAYEVSIRSNELNELY  1679

Query  1692  GIRHKDKPHSYKVPFESLLNKVLNNRDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAE  1751
             GIRHKD++HSYK PFESLLNKVLNN+DLSVKYAQVDPNDPKKEIFITDEEQSNLA+QKAE
Sbjct  1680  GIRHKDRAHSYKAPFESLLNKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLAKQKAE  1739

Query  1752  ELKEAFKDWIYKDYARRTHLEQIYNDTFNNSVLKTYDGSQLELEGFNHHISLRSHQKNAI  1811
             ELKEAFKDWIYKDYARRTHLEQIYNDTFNN VLKTYDGSQLELEGFNH+I LR+HQKNAI
Sbjct  1740  ELKEAFKDWIYKDYARRTHLEQIYNDTFNNLVLKTYDGSQLELEGFNHNIKLRPHQKNAI  1799

Query  1812  FRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTFIAVPNHLTKQWGDEFYKAYP  1871
             FRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKT+IAVPNHLTKQWGDEFYKAYP
Sbjct  1800  FRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNHLTKQWGDEFYKAYP  1859

Query  1872  NANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIeelkeeelvna  1931
             NANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNA
Sbjct  1860  NANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNA  1919

Query  1932  eknFERQELAYKNNPRETKKPNERVFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIV  1991
             EKNFERQELAY+NNPRETKKPNER FKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIV
Sbjct  1920  EKNFERQELAYQNNPRETKKPNERAFKNKLDKIRAKYDAILEKQGSHIDISQMGIDNLIV  1979

Query  1992  DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNNKKIMFLTGTPIANSLS  2051
             DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQN+KKIM+LTGTPIANSLS
Sbjct  1980  DEAHLFKNLAFETSMEKIAGLGNQQGSNRARDLFIKTRYLHQNDKKIMLLTGTPIANSLS  2039

Query  2052  EMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL  2111
             EMYHLQRYLTP+VLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL
Sbjct  2040  EMYHLQRYLTPEVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYKMVNRFSKFSDVQGL  2099

Query  2112  STMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS  2171
             STMYRAFADIV NDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS
Sbjct  2100  STMYRAFADIVCNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVADENGKYNEGS  2159

Query  2172  IIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPSTKVEKEFSKSYAMAENIYEN  2231
             IIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDP++KVEKEFSKSYAMAENIYEN
Sbjct  2160  IIDRMQKCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAENIYEN  2219

Query  2232  YLETNATKGTQLGFIGLSTPKTHSQKVSLEAPDNAHEIENKNPLDEAQELLESLSSYDEN  2291
             YLETNATKGTQLGFIGLSTPKTHSQKVSLEA DNAHE ENKNPLDEAQELLESLSSYDEN
Sbjct  2220  YLETNATKGTQLGFIGLSTPKTHSQKVSLEALDNAHETENKNPLDEAQELLESLSSYDEN  2279

Query  2292  GNLIAPskkelenelkekevksvnLDEEIAKGCSFDVYSDVLRHLVQMGIPQNEIAFIHD  2351
             GNLIAPSKKELENELKEKE KSVNLDEEIAKGC FDVYSDVLRHLVQMGIPQNEIAFIHD
Sbjct  2280  GNLIAPSKKELENELKEKEAKSVNLDEEIAKGCLFDVYSDVLRHLVQMGIPQNEIAFIHD  2339

Query  2352  AKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2411
             AKTEEQKQDLFKK+NRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR
Sbjct  2340  AKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGR  2399

Query  2412  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMW  2445
             GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMW
Sbjct  2400  GIRQGNILHQNDPENFRMKIYRYATEKTYDSRMW  2433