Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative transposase |
NC_017328 (Shigella flexneri 2002017) |
4e-134 |
100 |
|
hypothetical protein |
NC_004337 (Shigella flexneri 301) |
4e-134 |
100 |
|
transposase (fragment) |
NC_011748 (Escherichia coli 55989) |
1e-122 |
91 |
|
hypothetical protein |
NC_010658 (Shigella boydii CDC 3083-94) |
1e-120 |
92 |
|
protein in IS element |
NC_007613 (Shigella boydii Sb227) |
1e-110 |
88 |
|
transposase |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
3e-109 |
78 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
9e-100 |
72 |
|
protein encoded within IS |
NC_018654 (Escherichia coli 2009EL-2050) |
3e-99 |
72 |
|
ISSfl4 ORF3 |
NC_017319 (Shigella flexneri 2002017) |
1e-95 |
66 |
|
ISSfl3 orfD |
NC_004741 (Shigella flexneri 2457T) |
7e-96 |
66 |
|
ISSfl3 orfD |
NC_004741 (Shigella flexneri 2457T) |
8e-95 |
66 |
|
putative transposase |
NC_017643 (Escherichia coli UMNK88) |
3e-87 |
85 |
|
ISSfl3 orfC,D |
NC_017328 (Shigella flexneri 2002017) |
2e-84 |
67 |
|
ISSfl4 ORF3 |
NC_004337 (Shigella flexneri 301) |
2e-84 |
67 |
|
ISSfl4 ORF3 |
NC_004337 (Shigella flexneri 301) |
2e-84 |
67 |
|
ISSfl4 ORF3 |
NC_008258 (Shigella flexneri 8401) |
2e-84 |
67 |
|
ISSfl4 ORF3 |
NC_008258 (Shigella flexneri 8401) |
2e-84 |
67 |
|
truncated transposase |
NC_017639 (Escherichia coli UMNK88) |
6e-81 |
55 |
|
hypothetical protein |
NC_013353 (Escherichia coli 12009) |
2e-80 |
57 |
|
truncated transposase |
NC_011416 (Escherichia coli SE11) |
1e-79 |
55 |
|
hypothetical protein |
NC_017639 (Escherichia coli UMNK88) |
9e-80 |
55 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
2e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
protein encoded within IS |
NC_007613 (Shigella boydii Sb227) |
3e-77 |
56 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
3e-68 |
57 |
|
transposase |
NC_013854 (Azospirillum sp. B510) |
3e-62 |
46 |
|
transposase IS66 |
NC_008688 (Paracoccus denitrificans PD1222) |
3e-61 |
46 |
|
transposase |
NC_013857 (Azospirillum sp. B510) |
3e-56 |
46 |
|
hypothetical protein |
NC_004431 (Escherichia coli CFT073) |
1e-53 |
53 |
|
hypothetical protein |
NC_017652 (Escherichia coli clone D i14) |
1e-53 |
53 |
|
hypothetical protein |
NC_017651 (Escherichia coli clone D i2) |
1e-53 |
53 |
|
putative transposase |
NC_017631 (Escherichia coli ABU 83972) |
3e-49 |
54 |
|
transposase |
NC_013854 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013856 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013856 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013857 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013857 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013856 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase |
NC_013860 (Azospirillum sp. B510) |
1e-42 |
45 |
|
transposase IS66 |
NC_016147 (Pseudoxanthomonas spadix BD-a59) |
2e-41 |
42 |
|
transposase |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
2e-37 |
41 |
|
transposase, fragment |
NC_006513 (Aromatoleum aromaticum EbN1) |
7e-37 |
41 |
|
putative transposase |
NC_015186 (Acidiphilium multivorum AIU301) |
3e-35 |
42 |
|
Transposase |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
1e-30 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004337_P1' AND ph.id_pai_orf='11' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc