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Homologs of hrcQ gene of NC_003902_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcQ
( YP_005636496.1 )

type III secretion protein HrcQ

NC_017271
(Xanthomonas campestris 756C)

2e-103

2) xccb100_3078
( YP_001904483.1 )

HrcQ protein

NC_010688
(Xanthomonas campestris B100)

3e-103

3) XC_3015
( YP_244083.1 )

HrcQ protein

NC_007086
(Xanthomonas campestris 8004)

3e-103

100

4) hrcQ
( NP_636601.1 )

HrcQ protein

NC_003902
(Xanthomonas campestris ATCC 33913)

3e-103

100

5) hrcQ
( YP_362154.1 )

HrcQ protein

NC_007508
(Xanthomonas campestris 85-10)

2e-79

6) hrcQ
( YP_004850000.1 )

HrcQ protein

NC_016010
(Xanthomonas axonopodis F1)

9e-79

7) hrcQ
( YP_007648828.1 )

HrcQ protein

NC_020815
(Xanthomonas citri Aw12879)

2e-78

8) hrcQ
( NP_640758.1 )

HrcQ protein

NC_003919
(Xanthomonas axonopodis 306)

2e-78

9) XAC29_02065
( YP_007634906.1 )

HrcQ protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

2e-78

10) hrcQ
( YP_005630679.1 )

type III secretion protein HrcQ

NC_017267
(Xanthomonas oryzae BLS256)

4e-78

11) hrcQ
( YP_198721.1 )

hypothetical protein

NC_006834
(Xanthomonas oryzae KACC10331)

9e-76

12) XOO_0094
( YP_449123.1 )

HrcQ protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

1e-75

13) hrpD1
( YP_001911275.1 )

type III secretion apparatus protein, YscQ/HrcQ family

NC_010717
(Xanthomonas oryzae PXO99A)

1e-66

• Sequence Alignments

1) hrcQ in NC_017271


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  368 bits (1384),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  31   VLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARdglalllneaddalRV  90
            +LCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  91   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAEtasplllaa  150
            AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  151  lqtasaalaqpsplpawlsalRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  210
            LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  211  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPasdssssatdvaaLELPVQLEVDQ  270
            ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  271  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  330
            LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  331  HADA  334
            HADA
Sbjct  301  HADA  304

2) xccb100_3078 in NC_010688


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  368 bits (1382),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 303/304 (99%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  32   VLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARdglalllneaddalRV  91
            +LCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  92   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAEtasplllaa  151
            AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  152  lqtasaalaqpsplpawlsalRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  211
            LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  212  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPasdssssatdvaaLELPVQLEVDQ  271
            ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  272  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  331
            LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  332  HADA  335
            HADA
Sbjct  301  HADA  304

3) XC_3015 in NC_007086


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  367 bits (1381),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARdglalllneaddalRV  60
            MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAEtasplllaa  120
            AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  lqtasaalaqpsplpawlsalRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180
            LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPasdssssatdvaaLELPVQLEVDQ  240
            ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300
            LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

4) hrcQ in NC_003902


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  367 bits (1381),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 304/304 (100%), Positives = 304/304 (100%), Gaps = 0/304 (0%)

Query  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARdglalllneaddalRV  60
            MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAEtasplllaa  120
            AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  lqtasaalaqpsplpawlsalRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180
            LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPasdssssatdvaaLELPVQLEVDQ  240
            ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300
            LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

5) hrcQ in NC_007508


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  289 bits (1081),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 222/304 (74%), Positives = 270/304 (89%), Gaps = 0/304 (0%)

Query  1    MFGDPRAARQCGFATHCRRISPNDAARLRLQLDAGQMELRIAARDGLALLLNEDDDSLRV  60
            M+ DPRAA++CG++++ R I + DAARL+LQ+D+G +ELRIAARDGLALLLNE DD+LRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   SIAGMLLADRlgafaplglgaaEVIAFERDAEPDDCHGIGMTLGDLDaialtasapllat  120
            +IAG+LL+D L A+ PLGLGAAEV+AFER A++ D  +IG+TLG++DAIA TAS+ LLA+
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  lqaavgglappaqqpawlaalRVNTRLRIGGRTASAALLQSLRPGDVLLHCTASAAVTSG  180
            LQ+A ++LA P+  PAWL+ALRV TRLRIG RTA+AALLQSLRPGDVLLH  A+A+V SG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  DVLWGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ  240
            ++LWGI+GG VLRAPVRL LQQMILE++PTMQHD   ++ ++S+++VA LELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSEST  300
            LALSLS LSGLQPGQILELSVPVDQADIRLVVYGQTIG GRLLAVGEHLGVQILSMSE++
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

6) hrcQ in NC_016010


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  287 bits (1073),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 218/301 (73%), Positives = 269/301 (90%), Gaps = 0/301 (0%)

Query  34   DPRAARQCGFATHCRRIWPNDAARLRLQLDAGQMDLRITARdglalllnedddalRVSIA  93
            DPRAA++CG++++ R I++ DAARL+LQ+D+G ++LRI+ARDGLALLLNE DDALRV+IA
Sbjct  4    DPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRVAIA  63

Query  94   GMLLADRlgafaplglgaaEVIAFERDAEPDDCHGIGMTLGdldavaltasasllatlqa  153
            G+LL+D L A+ PLGLGAAEV+AFER A++ D  +IG+TLG++DA+A TAS+ LLA+LQ+
Sbjct  64   GVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAALQT  123

Query  154  avGGLTPPTQLPAWLAALRVNTRLRIGGRTASAALLQSLRPGDVLLHCTDSAAVTSGDVL  213
            A ++L+ P+ LPAWL+ALRV TRLRIG RTA+AALLQSLRPGDVLLH   +A+V SG++L
Sbjct  124  ASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSGELL  183

Query  214  WGIAGGVVLRAPVRLNLQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQLAL  273
            WGI+GG VLRAPVRL LQQMILE++PTMQHD   ++ ++S+++VA LELPVQLEVDQLAL
Sbjct  184  WGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQLAL  243

Query  274  SLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHAD  333
            SLS LSGLQPGQILELSVPVDQADIRLVVYGQTIG GRLLAVGEHLGVQILSMSE++HAD
Sbjct  244  SLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETAHAD  303

Query  334  A  334
            A
Sbjct  304  A  304

7) hrcQ in NC_020815


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 226/301 (76%), Positives = 271/301 (91%), Gaps = 0/301 (0%)

Query  34   DPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRVSIA  93
            DPRAA++CG++++RR I + DAARL+LQ+D+G +++RIAARDGLALLLNE D+ALRV+IA
Sbjct  4    DPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRVAIA  63

Query  94   GIlladrlgalaplglgaaEVIAFERDAEPDDCHGIGITLGDLDaialtasapllatlrt  153
            G+LL+D L AL PLGLGAAEV+AFER A++ D  +IGITLG++DAIA TAS+ LLA+L+T
Sbjct  64   GVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAALQT  123

Query  154  avaalaapaplpvwlaalrVNTRLRIGERTASAALLQSLRPGDVLLHCTASAAATSGEVL  213
            A AALA P+PLP WL+ALRV TRLRIG+RTA+AALLQSLRPGDVLLH  A+A+  SGE+L
Sbjct  124  ASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSGELL  183

Query  214  WGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQLAL  273
            WGI+GGAVLRAPVRL LQQMILE++PTMQHD   ++ + SA++VA LELPVQLEVDQLAL
Sbjct  184  WGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQLAL  243

Query  274  SLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSESTHAD  333
            SLS LSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRL++VGEHLGVQILSMSE++HAD
Sbjct  244  SLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETAHAD  303

Query  334  A  334
            A
Sbjct  304  A  304

8) hrcQ in NC_003919


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  285 bits (1067),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 227/304 (75%), Positives = 273/304 (90%), Gaps = 0/304 (0%)

Query  1    MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRV  60
            M+ DPRAA++CG++++RR I + DAARL+LQ+D+G +++RIAARDGLALLLNE D+ALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   SIAGIlladrlgalaplglgaaEVIAFERDAEPDDCHGIGITLGDLDaialtasapllat  120
            +IAG+LL+D L AL PLGLGAAEV+AFER A++ D  +IGITLG++DAIA TAS+ LLA+
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  lrtavaalaapaplpvwlaalrVNTRLRIGERTASAALLQSLRPGDVLLHCTASAAATSG  180
            L+TA AALA P+PLP WL+ALRV TRLRIG+RTA+AALLQSLRPGDVLLH  A+A+  SG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  EVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ  240
            E+LWGI+GGAVLRAPVRL LQQMILE++PTMQHD   ++ + SA++VA LELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSEST  300
            LALSLS LSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRL++VGEHLGVQILSMSE++
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

9) XAC29_02065 in NC_020800


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  285 bits (1067),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 227/304 (75%), Positives = 273/304 (90%), Gaps = 0/304 (0%)

Query  1    MFGDPRAARQCGFATHRRRISPNDAARLRLQLDTGQMDVRIAARDGLALLLNEDDHALRV  60
            M+ DPRAA++CG++++RR I + DAARL+LQ+D+G +++RIAARDGLALLLNE D+ALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   SIAGIlladrlgalaplglgaaEVIAFERDAEPDDCHGIGITLGDLDaialtasapllat  120
            +IAG+LL+D L AL PLGLGAAEV+AFER A++ D  +IGITLG++DAIA TAS+ LLA+
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  lrtavaalaapaplpvwlaalrVNTRLRIGERTASAALLQSLRPGDVLLHCTASAAATSG  180
            L+TA AALA P+PLP WL+ALRV TRLRIG+RTA+AALLQSLRPGDVLLH  A+A+  SG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  EVLWGIAGGAVLRAPVRLNLQQMILEATPTMQHDTFEPEVAQSASNVAELELPVQLEVDQ  240
            E+LWGI+GGAVLRAPVRL LQQMILE++PTMQHD   ++ + SA++VA LELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLVTVGEHLGVQILSMSEST  300
            LALSLS LSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRL++VGEHLGVQILSMSE++
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

10) hrcQ in NC_017267


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 218/301 (73%), Positives = 266/301 (89%), Gaps = 0/301 (0%)

Query  34   DPRAARQCGFVTHCRGILPNDAARLRLQLDTGQMDLRIAARDGlalllneddealRVSIA  93
            DPRAA++CG+ ++ RGI + DAARL+LQ+D+G ++LRIAARDGLALLLNE D+ALRV+IA
Sbjct  4    DPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRVAIA  63

Query  94   GMLLADRLSAFAPLGLGAAEVIAFERDAAPDDCHGIGMTLGDlnaialtasaslldtlqa  153
            G+LL+D L A+ PLGLGAAEV+AFER A + D  +IG+TLG+++AIA TAS+ LL +LQ+
Sbjct  64   GVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAALQT  123

Query  154  aVDGlaapaqlpawlaplRVNTRMRIGGRTASAALLQSLRPGDVLLHCTAAAAVTRGEVL  213
            A  +LA P+ LPAWL++LRV TR+RIG RTA+AALLQSLRPGDVLLH  A+A+V  GE+L
Sbjct  124  ASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSGELL  183

Query  214  WGIAGGAVLRAPVRLNMQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQLAL  273
            WGI+GGAVLRAPVRL +QQMILE++PTMQHD   ++ ++S+++VA LELPVQLEVDQLAL
Sbjct  184  WGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQLAL  243

Query  274  SLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHAD  333
            SLS LSGLQPGQILELSVPVDQADIRLVVYGQTIG GRLLAVGEHLGVQILSMSE++HAD
Sbjct  244  SLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETAHAD  303

Query  334  A  334
            A
Sbjct  304  A  304

11) hrcQ in NC_006834


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  277 bits (1035),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 218/301 (73%), Positives = 265/301 (89%), Gaps = 0/301 (0%)

Query  34   DPRAARQCGFVTHCRGISPNDAALLRLQVDTGQMDLRIAARdglalllnedddalRVSIA  93
            DPRAA++CG+ ++ RGI + DAA L+LQ D+G ++LRIAARDGLALLLNE DDALRV+IA
Sbjct  4    DPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRVAIA  63

Query  94   GMLLADHlgafaplglaaaEVIAFERDATPDDCHGIGMTLGDLDAIALKASASLLDTLQA  153
            G+LL+D+L A+ PLGL+AAEV+AFER A + D  +IG+TLG++DAIA  AS+ LL +LQ+
Sbjct  64   GVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAALQT  123

Query  154  AVDGlaapaqlpawlaalRVNTRLRIGGRTASAALLQSLRPGDVLLHCTAAAALTSGEVL  213
            A  +LA P+ LPAWL+ALRV TRLRIG RTA+AALLQSLRPGDVLLH  A+A++ SGE+L
Sbjct  124  ASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSGELL  183

Query  214  WGIAGGAVLRAAVRLNMQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQLAL  273
            WGI+GGAVLRA+VRL +QQMILE++PTMQHD   ++ ++S+++VA LELPVQLEVDQLAL
Sbjct  184  WGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQLAL  243

Query  274  SLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSESTHAD  333
            SLS LSGLQPGQILELSVPVDQADIRLVVYGQTIG GRLLAVGEHLGVQILSMSE++HAD
Sbjct  244  SLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETAHAD  303

Query  334  A  334
            A
Sbjct  304  A  304

12) XOO_0094 in NC_007705


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  276 bits (1032),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 218/304 (72%), Positives = 267/304 (88%), Gaps = 0/304 (0%)

Query  1    MFGDPRAGRQCGFVTHCRGISPNDAALLRLQVDTGQMDLRIAARdglalllnedddalRV  60
            M+ DPRA+++CG+ ++ RGI + DAA L+LQ D+G ++LRIAARDGLALLLNE DDALRV
Sbjct  1    MLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLALLLNEADDALRV  60

Query  61   SIAGMLLADHlgafaplglaaaEVIAFERDATPDDCHGIGMTLGDLDAIALKASASLLDT  120
            +IAG+LL+D+L A+ PLGL+AAEV+AFER A + D  +IG+TLG++DAIA  AS+ LL +
Sbjct  61   AIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAA  120

Query  121  LQAAVDGlaapaqlpawlaalRVNTRLRIGGRTASAALLQSLRPGDVLLHCTAAAALTSG  180
            LQ+A  +LA P+ LPAWL+ALRV TRLRIG RTA+AALLQSLRPGDVLLH  A+A++ SG
Sbjct  121  LQTASAALAQPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSG  180

Query  181  EVLWGIAGGAVLRAAVRLNMQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQ  240
            E+LWGI+GGAVLRA+VRL +QQMILE++PTMQHD   ++ ++S+++VA LELPVQLEVDQ
Sbjct  181  ELLWGIPGGAVLRAPVRLTLQQMILETAPTMQHDMPASDSSSSATDVAALELPVQLEVDQ  240

Query  241  LALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLGVQILSMSEST  300
            LALSLS LSGLQPGQILELSVPVDQADIRLVVYGQTIG GRLLAVGEHLGVQILSMSE++
Sbjct  241  LALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHLGVQILSMSETA  300

Query  301  HADA  304
            HADA
Sbjct  301  HADA  304

13) hrpD1 in NC_010717


> NC_003902_P1|11|G11|21230684|NP_636601.1|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|9191..10105|hrcQ|XCC1227|HrcQ 
protein
Length=304

 Score =  246 bits (918),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 201/273 (74%), Positives = 241/273 (89%), Gaps = 0/273 (0%)

Query  1    MDTGQMDLRIAARdglalllnedddalRVSIAGMLLADHlgafaplglaaaEVIAFKRDA  60
             D+G ++LRIAARDGLALLLNE DDALRV+IAG+LL+D+L A+ PLGL+AAEV+AF R A
Sbjct  32   FDSGSLELRIAARDGLALLLNEADDALRVAIAGVLLSDDLRALEPLGLGAAEVVAFERCA  91

Query  61   TPDDCHGIGMTLGDLDAIALKASASLLDTLQAAVDGlaapaqlpawlaalRVNTRLRIGG  120
             + D  +IG+TLG++DAIA  AS+ LL +LQ+A  +LA P+ LPAWL+ALRV TRLRIG 
Sbjct  92   DAVDRLDIGITLGGIDAIAETASPLLLAALQTASAALAQPSPLPAWLSALRVTTRLRIGQ  151

Query  121  RTASAALLQSLRPGDVLLHCTAAAALTSGEVLWGIAGGAVLRAAVRLNMQQMILEASPTM  180
            RTA+AALLQSLRPGDVLLH  A+A++ SGE+LWGI+GGAVLRA+VRL +QQMILE++PTM
Sbjct  152  RTATAALLQSLRPGDVLLHALATAPVRSGELLWGIPGGAVLRAPVRLTLQQMILETAPTM  211

Query  181  QHDTFEPEVAPSTSNVAELELPVQLEVDQLALSLSTLSGLQPGQILELSVPVDQADIRLV  240
            QHD   ++ ++S+++VA LELPVQLEVDQLALSLS LSGLQPGQILELSVPVDQADIRLV
Sbjct  212  QHDMPASDSSSSATDVAALELPVQLEVDQLALSLSVLSGLQPGQILELSVPVDQADIRLV  271

Query  241  VYGQTIGTGRLLAVGEHLGVQILSMSESTHADA  273
            VYGQTIG GRLLAVGEHLGVQILSMSE++HADA
Sbjct  272  VYGQTIGIGRLLAVGEHLGVQILSMSETAHADA  304