Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of ECs4545 gene of NC_002695_P2

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcE24377A_4882
( - )

NC_009801
(Escherichia coli E24377A)

e-204

99.5

2) SeD_B0059
( - )

NC_011204
(Salmonella enterica CT_02021853)

1e-71

88.5

• Sequence Alignments

1) EcE24377A_4882 in NC_009801


>NC_002695_P2|11|G10|15833799|NP_312572.1|Escherichia_coli_O157:H7_str._Sakai|+|5291..5692|-|ECs4545|hypothetical 
          Length = 402

 Score = 709 bits (1829), Expect = e-204
 Identities = 362/364 (99%)
 Strand = Plus / Plus

Query: 1   atgcagaaaaatgtgactcccggcaggtgaaaaggctgccctaattatcctcccgaattt 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22  atgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcctcccgaattt 81

Query: 61  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  aaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaacttgctctt 141

Query: 121 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gaaaatggcattaacgccaatctgttgttcaaatggcgacaacaatggcgcgagggaaag 201

Query: 181 ctgctattaccttcttcagagagcccccagctacttcctgtgactcccgatgcagctgcc 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 ctgctattaccttcttcagagagcccccagctacttcctgtgactctcgatgcagctgcc 261

Query: 241 gaacagccagaatcgctcgcagaggacccggaaaccctcagtatcagctgtgaggtaacg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaacagccagaatcgctcgcagaggacccggaaaccctcagtatcagctgtgaggtaacg 321

Query: 301 ttccggcacgggacgctccgcttcaatggcaatgtcagcgaaaagctcctgactctgctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttccggcacgggacgctccgcttcaatggcaatgtcagcgaaaagctcctgactctgctg 381

Query: 361 atac 364
           ||||
Sbjct: 382 atac 385

2) SeD_B0059 in NC_011204


>NC_002695_P2|11|G10|15833799|NP_312572.1|Escherichia_coli_O157:H7_str._Sakai|+|5291..5692|-|ECs4545|hypothetical 
          Length = 402

 Score = 267 bits (690), Expect = 1e-71
 Identities = 149/174 (86%)
 Strand = Plus / Plus

Query: 192 cagctactccctgtgactctcaatgccacctccgtacagccagaactaaccgctgaaggc 251
           |||||||| |||||||||||| ||||  |  ||| ||||||||||     ||| || | |
Sbjct: 229 cagctacttcctgtgactctcgatgcagctgccgaacagccagaatcgctcgcagaggac 288

Query: 252 ccggaggttctcagtatcagctgtgaggcaacgttctggcacgggacgcttcgcctcaac 311
           |||||    ||||||||||||||||||| ||||||| ||||||||||||| ||| |||| 
Sbjct: 289 ccggaaaccctcagtatcagctgtgaggtaacgttccggcacgggacgctccgcttcaat 348

Query: 312 ggcactgtcagcgaaaagctcctgactctgctgatacaggaactgaagcgatga 365
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggcaatgtcagcgaaaagctcctgactctgctgatacaggaactgaagcgatga 402


 Score = 260 bits (672), Expect = 1e-69
 Identities = 144/160 (90%)
 Strand = Plus / Plus

Query: 1   gtgtcagatatgcagaaaaatgtgactcccggcaggcgtaagggctgccctaattattct 60
           || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||
Sbjct: 13  gtatcagatatgcagaaaaatgtgactcccggcaggcgaaaaggctgccctaattatcct 72

Query: 61  cctgagtttaagcagcagcttgttgcggcctcctgcgaacccggcttatccatctcaaaa 120
           || || ||||| |||||||| ||||| |||||||| ||||||||  ||||||||||||||
Sbjct: 73  cccgaatttaaacagcagctcgttgctgcctcctgtgaacccgggatatccatctcaaaa 132

Query: 121 ctggcgcttgaaaacggcattaacgccaatctgttgttta 160
           || || |||||||| ||||||||||||||||||||||| |
Sbjct: 133 cttgctcttgaaaatggcattaacgccaatctgttgttca 172


 Score = 56 bits (145), Expect = 4e-08
 Identities = 29/30 (97%)
 Strand = Plus / Plus

Query: 161 aatggcgcaagggaaagctgctattacctt 190
           |||||||| |||||||||||||||||||||
Sbjct: 185 aatggcgcgagggaaagctgctattacctt 214