Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of VC0185 gene of NC_002505_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) VCD_001428 in NC_012668


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  667 bits (2521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 404/404 (100%), Positives = 404/404 (100%), Gaps = 0/404 (0%)

Query  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60
            METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK
Sbjct  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60

Query  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120
            AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS
Sbjct  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120

Query  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180
            MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP
Sbjct  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180

Query  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240
            ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
Sbjct  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240

Query  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300
            HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
Sbjct  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300

Query  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360
            NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL
Sbjct  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360

Query  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404
            ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404

2) VC0185 in NC_002505


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  667 bits (2521),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 404/404 (100%), Positives = 404/404 (100%), Gaps = 0/404 (0%)

Query  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60
            METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK
Sbjct  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60

Query  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120
            AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS
Sbjct  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120

Query  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180
            MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP
Sbjct  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180

Query  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240
            ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
Sbjct  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240

Query  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300
            HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
Sbjct  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300

Query  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360
            NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL
Sbjct  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360

Query  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404
            ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404

3) Vch1786_I2468 in NC_016445


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  660 bits (2496),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 400/400 (100%), Positives = 400/400 (100%), Gaps = 0/400 (0%)

Query  1    MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI  60
            MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI
Sbjct  5    MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI  64

Query  61   TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL  120
            TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL
Sbjct  65   TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL  124

Query  121  HVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKPARNE  180
            HVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKPARNE
Sbjct  125  HVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKPARNE  184

Query  181  QQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNPHIHR  240
            QQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNPHIHR
Sbjct  185  QQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNPHIHR  244

Query  241  YEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLLNNLG  300
            YEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLLNNLG
Sbjct  245  YEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLLNNLG  304

Query  301  NPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDALALIM  360
            NPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDALALIM
Sbjct  305  NPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDALALIM  364

Query  361  GWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  400
            GWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  365  GWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404

4) N175_01725 in NC_022223


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  659 bits (2492),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/404 (99%), Positives = 402/404 (99%), Gaps = 0/404 (0%)

Query  1    MEAGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWLNYLVNIRK  60
            ME+GMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLW+NYLVNIRK
Sbjct  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60

Query  61   AADITASVRALKRYWQFLESNNYSWDNFPANDYLKPTYRFRNDDLLKAARCGEIAFSTAS  120
            A DITASVRALKRYWQFLE+NNYSWDNFPANDYLKPTYRFRNDDLLKAAR GEIAFSTAS
Sbjct  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120

Query  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFAVRSTDLRIRKP  180
            MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRF+VRSTDLRIRKP
Sbjct  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180

Query  181  ARNEQQKLNPLSQQELLFFADCLRECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240
            ARNEQQKLNPLSQQELLFFADCL+ECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
Sbjct  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240

Query  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300
            HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
Sbjct  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300

Query  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVSDAL  360
            NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPV+DAL
Sbjct  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360

Query  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404
            ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404

5) VAA_02407 in NC_015633


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  659 bits (2492),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/404 (99%), Positives = 402/404 (99%), Gaps = 0/404 (0%)

Query  1    MEAGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWLNYLVNIRK  60
            ME+GMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLW+NYLVNIRK
Sbjct  1    METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRK  60

Query  61   AADITASVRALKRYWQFLESNNYSWDNFPANDYLKPTYRFRNDDLLKAARCGEIAFSTAS  120
            A DITASVRALKRYWQFLE+NNYSWDNFPANDYLKPTYRFRNDDLLKAAR GEIAFSTAS
Sbjct  61   AVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTAS  120

Query  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFAVRSTDLRIRKP  180
            MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRF+VRSTDLRIRKP
Sbjct  121  MYILHVIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180

Query  181  ARNEQQKLNPLSQQELLFFADCLRECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240
            ARNEQQKLNPLSQQELLFFADCL+ECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
Sbjct  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240

Query  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300
            HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
Sbjct  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300

Query  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVSDAL  360
            NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPV+DAL
Sbjct  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360

Query  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404
            ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404

6) O3Y_00850 in NC_016944


> NC_002505_P1|11|G11|15640215|NP_229842.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|-|12824..14038|-|VC0185|transposase
Length=404

 Score =  636 bits (2403),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 400/404 (99%), Positives = 400/404 (99%), Gaps = 4/404 (0%)

Query  1    MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI  60
            MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI
Sbjct  5    MVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNLWFNYLVNIRKAVDI  64

Query  61   TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL  120
            TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL
Sbjct  65   TASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRFRNDDLLKAARSGEIAFSTASMYIL  124

Query  121  HVISTTIKFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180
            HVI    KFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP
Sbjct  125  HVI----KFYEWAAHERFITFTEENKPFNYQIVHIANSGMMSHNNPRFTVRSTDLRIRKP  180

Query  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240
            ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP
Sbjct  181  ARNEQQKLNPLSQQELLFFADCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNP  240

Query  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300
            HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
Sbjct  241  HIHRYEVEIGIHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL  300

Query  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360
            NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL
Sbjct  301  NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSLLDHLPVGDAL  360

Query  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404
            ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML
Sbjct  361  ALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILEEAML  404