Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative type IV secretory pathway VirB9 component |
NC_011751 (Escherichia coli UMN026) |
6e-139 |
99 |
|
type IV secretory pathway VirB9 component |
NC_005814 (Yersinia pestis 91001) |
8e-139 |
99 |
|
type IV secretory pathway VirB9 component |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
5e-134 |
98 |
|
type IV secretory pathway VirB9 component |
NC_016845 (Klebsiella pneumoniae HS11286) |
7e-133 |
97 |
|
hypothetical protein |
NC_009792 (Citrobacter koseri ATCC BAA-895) |
2e-130 |
100 |
|
putative type IV secretory pathway VirB9 component |
NC_011745 (Escherichia coli ED1a) |
2e-130 |
100 |
|
VirB9 |
NC_018522 (Klebsiella pneumoniae 1084) |
2e-130 |
100 |
|
Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) |
NC_020181 (Enterobacter aerogenes EA1509E) |
2e-129 |
100 |
|
hypothetical protein |
NC_009779 (Cronobacter sakazakii ATCC BAA-894) |
7e-120 |
85 |
|
hypothetical protein |
NC_013284 (Cronobacter turicensis z3032) |
3e-118 |
84 |
|
P-type conjugative transfer protein VirB9 |
NC_013592 (Dickeya dadantii Ech586) |
1e-106 |
83 |
|
TriH protein |
NC_006154 (Yersinia pseudotuberculosis IP 32953) |
1e-68 |
48 |
|
Type IV secretion system protein virB9 |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-66 |
48 |
|
conjugal transfer protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
6e-62 |
47 |
|
TriH conjugal transfer protein |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
6e-60 |
45 |
|
P-type conjugative transfer protein VirB9 |
NC_012912 (Dickeya zeae Ech1591) |
2e-58 |
47 |
|
P-type conjugative transfer protein VirB9 |
NC_011092 (Salmonella enterica CVM19633) |
3e-58 |
48 |
|
P-type conjugative transfer protein VirB9 |
NC_011283 (Klebsiella pneumoniae 342) |
2e-56 |
47 |
|
VirB9 |
NC_014500 (Dickeya dadantii 3937) |
7e-56 |
46 |
|
P-type conjugative transfer protein VirB9 |
NC_013592 (Dickeya dadantii Ech586) |
1e-55 |
46 |
|
P-type conjugative transfer protein VirB9 |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
2e-53 |
47 |
|
P-type conjugative transfer protein VirB9 |
NC_017047 (Rahnella aquatilis HX2) |
3e-53 |
47 |
|
P-type conjugative transfer protein VirB9 |
NC_016818 (Rahnella aquatilis CIP 78.65) |
6e-53 |
46 |
|
putative conjugal transfer protein |
NC_022078 (Klebsiella pneumoniae JM45) |
7e-53 |
43 |
|
conjugal transfer protein |
NC_010555 (Proteus mirabilis HI4320) |
3e-52 |
42 |
|
Putative pilx9 protein, putative conjugal transfer protein, putative exported protein |
NC_011739 (Escherichia coli UMN026) |
7e-46 |
42 |
|
VirB9/CagX/TrbG, a component of the type IV secretion system |
NC_017624 (Salmonella enterica B182) |
2e-45 |
41 |
|
conjugal transfer protein |
NC_021842 (Salmonella enterica CFSAN002069) |
2e-45 |
41 |
|
pilx9 protein |
NC_011204 (Salmonella enterica CT_02021853) |
5e-45 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY233333' AND ph.id_pai_orf='11' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc