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Homologs of int gene of AY144117

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) gene0012
( YP_003039785.1 )

putative integrase/recombinase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

0.0

2) gene0017
( YP_003039791.1 )

putative integrase/recombinase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

0.0

3) PAU_02999
( YP_003041829.1 )

putative integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

0.0

4) gene0007
( YP_003039777.1 )

putative phage integrase/recombinase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-101

5) gene0025
( YP_003039799.1 )

Phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-101

6) gene0035
( YP_003041835.1 )

phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-101

7) xerC
( YP_002650159.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-89

8) xerD
( YP_005804184.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

9e-89

9) xerC
( YP_005816805.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

2e-88

10) xerC
( YP_005818190.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

3e-88

11) xerC
( YP_002650143.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-87

12) xerC
( YP_002650168.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-87

13) xerD
( YP_005804169.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-86

14) xerD
( YP_005801926.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-86

15) xerD
( YP_005804153.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-86

16) xerD
( YP_005804162.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-86

17) xerC
( YP_002648134.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-86

18) xerC
( YP_002650129.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-86

19) xerC
( YP_002650136.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-86

20) xerD
( YP_005804193.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

5e-85

21) xerC
( YP_002650152.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

7e-85

22) xerD
( YP_005804177.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-84

23) xerC
( YP_005818195.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

2e-82

24) xerC
( YP_005820148.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

8e-81

25) xerC
( YP_005816812.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

8e-73

26) xerC
( YP_002649888.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

7e-57

27) xerC
( YP_005818401.1 )

site-specific tyrosine recombinase XerC

NC_017445
(Erwinia sp. Ejp617)

3e-56

28) xerD
( YP_005803898.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

4e-56

29) xerC
( YP_002649878.1 )

site-specific tyrosine recombinase XerC

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-56

30) xerD
( YP_005803891.1 )

tyrosine recombinase XerD

NC_017390
(Erwinia pyrifoliae DSM 12163)

8e-55

31) xerC
( NP_930904.1 )

site-specific tyrosine recombinase XerC

NC_005126
(Photorhabdus luminescens TTO1)

9e-55

32) xerC
( NP_930912.1 )

site-specific tyrosine recombinase XerC

NC_005126
(Photorhabdus luminescens TTO1)

9e-55

33) xerC
( NP_928437.1 )

site-specific tyrosine recombinase XerC

NC_005126
(Photorhabdus luminescens TTO1)

1e-54

34) xerC
( NP_930896.1 )

site-specific tyrosine recombinase XerC

NC_005126
(Photorhabdus luminescens TTO1)

1e-54

• Sequence Alignments

1) gene0012 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  693 bits (2622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/467 (91%), Positives = 453/467 (98%), Gaps = 2/467 (0%)

Query  1    MSSPVKHQSTPRPLTLRQHLDAYLDTLLLQGASQKSQSARHERLSPFVNWCEEQGILSAS  60
            MSSPVK+QS  +PLTLRQHLDAYLD LLLQGASQKSQSARHERLSPFV+WCEEQG++SA+
Sbjct  1    MSSPVKRQS--HPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAA  58

Query  61   QVTGPLLENWQQYLARYRKTNGQPYTPDSQRRRLRALRLWFDWLQQQHAIPTSPAATLAA  120
            QVT PLL NWQ+YLARYRK+NGQPYTPDSQRRRLR+LRLWFDWLQQQHAIP+SPA+TLA+
Sbjct  59   QVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLAS  118

Query  121  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVRGQGLSERTQESYEERLLPFISW  180
            PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAV+GQGLSERTQESYEERLLPF++W
Sbjct  119  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTW  178

Query  181  CEARGVMTAPQVSLPLLESYQRWLRSSRKANGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  240
            CEARGVMTAPQVSLPLLESYQRWLRS RK+NGQPYSPGSQRDRLSVLRQWFRWLLQRHHI
Sbjct  179  CEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  238

Query  241  LYNPTDNMVLPREEKRLPAQVMNEDETHTVLAATDINTPTGLRNRAILEVLWSTGIRRME  300
            LYNP D++VLP+EEKRLPAQVMNEDETHTVLAA++I+T TGLRNR ILEVLWSTGIRRME
Sbjct  239  LYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRME  298

Query  301  VANLLLSEVDFGRGVVLVRQGKGGKDRVVPIGEQALHWLSRWLSVRPELTRRGDSGHLFI  360
            VANLLLSEVDFGRGVVLVRQGKG KDRVVPIGEQALHWLSRWLSVRP+LTRRGDSGHLFI
Sbjct  299  VANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWLSVRPQLTRRGDSGHLFI  358

Query  361  TKKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  420
            T+KGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE
Sbjct  359  TRKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  418

Query  421  KLETTQIYTRVAIGHLKEVHEQTHPAERQSKQATPPDDKQANSDQPD  467
            KLETTQIYTRVAIGHLK VHEQTHPAER++ Q TP+D+ QA+SD+PD
Sbjct  419  KLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465

2) gene0017 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  693 bits (2622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/467 (91%), Positives = 453/467 (98%), Gaps = 2/467 (0%)

Query  1    MSSPVKHQSTPRPLTLRQHLDAYLDTLLLQGASQKSQSARHERLSPFVNWCEEQGILSAS  60
            MSSPVK+QS  +PLTLRQHLDAYLD LLLQGASQKSQSARHERLSPFV+WCEEQG++SA+
Sbjct  1    MSSPVKRQS--HPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAA  58

Query  61   QVTGPLLENWQQYLARYRKTNGQPYTPDSQRRRLRALRLWFDWLQQQHAIPTSPAATLAA  120
            QVT PLL NWQ+YLARYRK+NGQPYTPDSQRRRLR+LRLWFDWLQQQHAIP+SPA+TLA+
Sbjct  59   QVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLAS  118

Query  121  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVRGQGLSERTQESYEERLLPFISW  180
            PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAV+GQGLSERTQESYEERLLPF++W
Sbjct  119  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTW  178

Query  181  CEARGVMTAPQVSLPLLESYQRWLRSSRKANGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  240
            CEARGVMTAPQVSLPLLESYQRWLRS RK+NGQPYSPGSQRDRLSVLRQWFRWLLQRHHI
Sbjct  179  CEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  238

Query  241  LYNPTDNMVLPREEKRLPAQVMNEDETHTVLAATDINTPTGLRNRAILEVLWSTGIRRME  300
            LYNP D++VLP+EEKRLPAQVMNEDETHTVLAA++I+T TGLRNR ILEVLWSTGIRRME
Sbjct  239  LYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRME  298

Query  301  VANLLLSEVDFGRGVVLVRQGKGGKDRVVPIGEQALHWLSRWLSVRPELTRRGDSGHLFI  360
            VANLLLSEVDFGRGVVLVRQGKG KDRVVPIGEQALHWLSRWLSVRP+LTRRGDSGHLFI
Sbjct  299  VANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWLSVRPQLTRRGDSGHLFI  358

Query  361  TKKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  420
            T+KGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE
Sbjct  359  TRKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  418

Query  421  KLETTQIYTRVAIGHLKEVHEQTHPAERQSKQATPPDDKQANSDQPD  467
            KLETTQIYTRVAIGHLK VHEQTHPAER++ Q TP+D+ QA+SD+PD
Sbjct  419  KLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465

3) PAU_02999 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  693 bits (2622),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 423/467 (91%), Positives = 453/467 (98%), Gaps = 2/467 (0%)

Query  1    MSSPVKHQSTPRPLTLRQHLDAYLDTLLLQGASQKSQSARHERLSPFVNWCEEQGILSAS  60
            MSSPVK+QS  +PLTLRQHLDAYLD LLLQGASQKSQSARHERLSPFV+WCEEQG++SA+
Sbjct  1    MSSPVKRQS--HPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAA  58

Query  61   QVTGPLLENWQQYLARYRKTNGQPYTPDSQRRRLRALRLWFDWLQQQHAIPTSPAATLAA  120
            QVT PLL NWQ+YLARYRK+NGQPYTPDSQRRRLR+LRLWFDWLQQQHAIP+SPA+TLA+
Sbjct  59   QVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLAS  118

Query  121  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVRGQGLSERTQESYEERLLPFISW  180
            PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAV+GQGLSERTQESYEERLLPF++W
Sbjct  119  PDRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTW  178

Query  181  CEARGVMTAPQVSLPLLESYQRWLRSSRKANGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  240
            CEARGVMTAPQVSLPLLESYQRWLRS RK+NGQPYSPGSQRDRLSVLRQWFRWLLQRHHI
Sbjct  179  CEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHI  238

Query  241  LYNPTDNMVLPREEKRLPAQVMNEDETHTVLAATDINTPTGLRNRAILEVLWSTGIRRME  300
            LYNP D++VLP+EEKRLPAQVMNEDETHTVLAA++I+T TGLRNR ILEVLWSTGIRRME
Sbjct  239  LYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRME  298

Query  301  VANLLLSEVDFGRGVVLVRQGKGGKDRVVPIGEQALHWLSRWLSVRPELTRRGDSGHLFI  360
            VANLLLSEVDFGRGVVLVRQGKG KDRVVPIGEQALHWLSRWLSVRP+LTRRGDSGHLFI
Sbjct  299  VANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWLSVRPQLTRRGDSGHLFI  358

Query  361  TKKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  420
            T+KGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE
Sbjct  359  TRKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  418

Query  421  KLETTQIYTRVAIGHLKEVHEQTHPAERQSKQATPPDDKQANSDQPD  467
            KLETTQIYTRVAIGHLK VHEQTHPAER++ Q TP+D+ QA+SD+PD
Sbjct  419  KLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465

4) gene0007 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 222/327 (68%), Positives = 264/327 (81%), Gaps = 2/327 (0%)

Query  9    LATLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQR  68
            +ATLRQ+L A LE   + G S RT E+Y E+L PFV WCE R+V  APQVSLPLLES QR
Sbjct  141  FATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEARGVMTAPQVSLPLLESYQR  200

Query  69   YLRRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQRLPAQVL  128
             LR YRK++GQ Y+  SQ +RL  LR WFRWLLQRHHILYNP D L+LPKEE+RLPAQV+
Sbjct  201  WLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYNPVDSLVLPKEEKRLPAQVM  260

Query  129  SDVETEQVLNSLDTQTPLGLRNRAVLEALWSTGIRRTELINLRLGDIDRHRGVVVVRQGK  188
            ++ ET+ VL + + +T  GLRNR +LE LWSTGIRR E+ NL L+++D  RGVV+VRQGK
Sbjct  261  NEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVANLLLSEVDFGRGVVLVRQGK  320

Query  189  NGHDRVVPIGERALAWLERYLADVRPQLAYRYDSGYVFITVRGNPLSRNTLTQMAGHTIR  248
               DRVVPIGE+AL WL R L+ VRPQL+ R DSG +FIT +G  L+R TLTQ+A+++IR
Sbjct  321  GNKDRVVPIGEQALHWLSRWLS-VRPQLTRRGDSGHLFITRKGRGLARGTLTQIAADSIR  379

Query  249  EEAKLDKAGSCHVFRHSMATQMLENGADTRHIQAILGHKKLETTQIYTRVAIGHLKEVHE  308
             +A+L K+G+CH+FRHSMATQMLENGADTRHIQAILGH KLETTQIYTRVAIGHLK VHE
Sbjct  380  KQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEKLETTQIYTRVAIGHLKKVHE  439

Query  309  QTHPAERKPKKQKTPPDNRQTESAKPD  335
            QTHPAERKP  QKTP+DN Q+ES KPD
Sbjct  440  QTHPAERKP-EQKTPSDNPQAESDKPD  465


 Score = 93.1 bits (334),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 77/112 (69%), Gaps = 0/112 (0%)

Query  11   TLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQRYL  70
            TLRQ+L+AYL+     G S ++  + +E+L+PFV WCE ++V  A+QV+ PLL +WQ+YL
Sbjct  13   TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  71   RRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQR  122
             RYRKA+GQ Y  +SQ +RLR LR WF WL Q+H I  +PA  L  P   +R
Sbjct  73   ARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

5) gene0025 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 222/327 (68%), Positives = 264/327 (81%), Gaps = 2/327 (0%)

Query  9    LATLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQR  68
            +ATLRQ+L A LE   + G S RT E+Y E+L PFV WCE R+V  APQVSLPLLES QR
Sbjct  141  FATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEARGVMTAPQVSLPLLESYQR  200

Query  69   YLRRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQRLPAQVL  128
             LR YRK++GQ Y+  SQ +RL  LR WFRWLLQRHHILYNP D L+LPKEE+RLPAQV+
Sbjct  201  WLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYNPVDSLVLPKEEKRLPAQVM  260

Query  129  SDVETEQVLNSLDTQTPLGLRNRAVLEALWSTGIRRTELINLRLGDIDRHRGVVVVRQGK  188
            ++ ET+ VL + + +T  GLRNR +LE LWSTGIRR E+ NL L+++D  RGVV+VRQGK
Sbjct  261  NEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVANLLLSEVDFGRGVVLVRQGK  320

Query  189  NGHDRVVPIGERALAWLERYLADVRPQLAYRYDSGYVFITVRGNPLSRNTLTQMAGHTIR  248
               DRVVPIGE+AL WL R L+ VRPQL+ R DSG +FIT +G  L+R TLTQ+A+++IR
Sbjct  321  GNKDRVVPIGEQALHWLSRWLS-VRPQLTRRGDSGHLFITRKGRGLARGTLTQIAADSIR  379

Query  249  EEAKLDKAGSCHVFRHSMATQMLENGADTRHIQAILGHKKLETTQIYTRVAIGHLKEVHE  308
             +A+L K+G+CH+FRHSMATQMLENGADTRHIQAILGH KLETTQIYTRVAIGHLK VHE
Sbjct  380  KQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEKLETTQIYTRVAIGHLKKVHE  439

Query  309  QTHPAERKPKKQKTPPDNRQTESAKPD  335
            QTHPAERKP  QKTP+DN Q+ES KPD
Sbjct  440  QTHPAERKP-EQKTPSDNPQAESDKPD  465


 Score = 93.1 bits (334),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 77/112 (69%), Gaps = 0/112 (0%)

Query  11   TLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQRYL  70
            TLRQ+L+AYL+     G S ++  + +E+L+PFV WCE ++V  A+QV+ PLL +WQ+YL
Sbjct  13   TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  71   RRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQR  122
             RYRKA+GQ Y  +SQ +RLR LR WF WL Q+H I  +PA  L  P   +R
Sbjct  73   ARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

6) gene0035 in NC_012962


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 222/327 (68%), Positives = 264/327 (81%), Gaps = 2/327 (0%)

Query  9    LATLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQR  68
            +ATLRQ+L A LE   + G S RT E+Y E+L PFV WCE R+V  APQVSLPLLES QR
Sbjct  141  FATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEARGVMTAPQVSLPLLESYQR  200

Query  69   YLRRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQRLPAQVL  128
             LR YRK++GQ Y+  SQ +RL  LR WFRWLLQRHHILYNP D L+LPKEE+RLPAQV+
Sbjct  201  WLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYNPVDSLVLPKEEKRLPAQVM  260

Query  129  SDVETEQVLNSLDTQTPLGLRNRAVLEALWSTGIRRTELINLRLGDIDRHRGVVVVRQGK  188
            ++ ET+ VL + + +T  GLRNR +LE LWSTGIRR E+ NL L+++D  RGVV+VRQGK
Sbjct  261  NEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVANLLLSEVDFGRGVVLVRQGK  320

Query  189  NGHDRVVPIGERALAWLERYLADVRPQLAYRYDSGYVFITVRGNPLSRNTLTQMAGHTIR  248
               DRVVPIGE+AL WL R L+ VRPQL+ R DSG +FIT +G  L+R TLTQ+A+++IR
Sbjct  321  GNKDRVVPIGEQALHWLSRWLS-VRPQLTRRGDSGHLFITRKGRGLARGTLTQIAADSIR  379

Query  249  EEAKLDKAGSCHVFRHSMATQMLENGADTRHIQAILGHKKLETTQIYTRVAIGHLKEVHE  308
             +A+L K+G+CH+FRHSMATQMLENGADTRHIQAILGH KLETTQIYTRVAIGHLK VHE
Sbjct  380  KQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEKLETTQIYTRVAIGHLKKVHE  439

Query  309  QTHPAERKPKKQKTPPDNRQTESAKPD  335
            QTHPAERKP  QKTP+DN Q+ES KPD
Sbjct  440  QTHPAERKP-EQKTPSDNPQAESDKPD  465


 Score = 93.1 bits (334),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 77/112 (69%), Gaps = 0/112 (0%)

Query  11   TLRQQLEAYLEIQTASGHSTRTPETYREWLTPFVDWCEMRAVYHAPQVSLPLLESWQRYL  70
            TLRQ+L+AYL+     G S ++  + +E+L+PFV WCE ++V  A+QV+ PLL +WQ+YL
Sbjct  13   TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  71   RRYRKADGQHYGNNSQLQRLRCLRGWFRWLLQRHHILYNPADMLILPKEEQR  122
             RYRKA+GQ Y  +SQ +RLR LR WF WL Q+H I  +PA  L  P   +R
Sbjct  73   ARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

7) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  322 bits (1206),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 208/347 (60%), Positives = 275/347 (80%), Gaps = 7/347 (2%)

Query  3    RPNPPTATESH-----ISRHGQTLRQLAESWLAHLVVAGRSARTAQGYGERVRAFLAWCE  57
            R + P+ TE+H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLHRLSAVRMLFRWLLKRHHILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ +RLS +R  FRWLL+RHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  SPAEQLELPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            +P + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHTALMWLARYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHTMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH+MATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 61.0 bits (212),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 77/122 (64%), Gaps = 2/122 (1%)

Query  12   SHISRHGQ--TLRQLAESWLAHLVVAGRSARTAQGYGERVRAFLAWCEPRGITYAPQVSL  69
            S + R+++  TLRQ  ++ L +L++ G S ++  +  ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLEAYQRWLQGYRRADGKQLVVNSQLHRLSAVRMLFRWLLKRHHILYSPAEQLELPKEE  129
            ++L   Q+ L  YR+A+G+    +SQ +RL ++R+ F WL ++H I  SPA  L  P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

8) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  319 bits (1198),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 207/347 (60%), Positives = 272/347 (79%), Gaps = 7/347 (2%)

Query  3    RPNPPTATESH-----ISRHGQTLRQLAESWLAHLVVAGRSARTAQGYGERVXAFLAWCE  57
            R + P+ TE+H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLHRLSAVRMLFRWLLKRHHILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ +RLS +R  FRWLL+RHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  SPAEQLELPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRXRAILELLWSSGIRRSELA  177
            +P + L LPKEE+RLPAQV +E ET+ VL + + +T  GLR R ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHTALMWLXRYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHXMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH MATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 61.3 bits (213),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 43/122 (36%), Positives = 77/122 (64%), Gaps = 2/122 (1%)

Query  12   SHISRHGQ--TLRQLAESWLAHLVVAGRSARTAQGYGERVXAFLAWCEPRGITYAPQVSL  69
            S + R+++  TLRQ  ++ L +L++ G S ++  +  ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLEAYQRWLQGYRRADGKQLVVNSQLHRLSAVRMLFRWLLKRHHILYSPAEQLELPKEE  129
            ++L   Q+ L  YR+A+G+    +SQ +RL ++R+ F WL ++H I  SPA  L  P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

9) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  318 bits (1194),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 210/343 (62%), Positives = 270/343 (79%), Gaps = 6/343 (1%)

Query  3    RPNPPTATESH-----ISQQGQTLRQLAESWLSHLAAAGRSPRTVQGYGERVRAFLAWCE  57
            R + P+ TE+H     I+ +  TLRQ   +WL  + + G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRWLQGYRKADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LESYQRWL++YRK++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEDETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +EDET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHAALIWLGRYLQDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKGRTEKLAEQPESAEPD  340
            LETTQIYTRVAIGHL+KVH +THPAE+   +K + +   AE+D
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD  462


 Score = 58.7 bits (203),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 69/112 (62%), Gaps = 0/112 (0%)

Query  20   TLRQLAESWLSHLAAAGRSPRTVQGYGERVRAFLAWCEPRGIRYAPQVSLAVLESYQRWL  79
            TLRQ  ++ L +L   G S ++  +  ER+ +F++WCE +G+  A+QV+ ++L + Q+ L
Sbjct  13   TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  80   QGYRKADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKEERR  131
              YRKA+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P   +R
Sbjct  73   ARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

10) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  318 bits (1191),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 209/347 (61%), Positives = 273/347 (79%), Gaps = 7/347 (2%)

Query  3    RPNPPTATESH-----ISQQGQTLRQLTESWLSHLAAAGRSPRTVQGYGERVRAFLAWCE  57
            R + P+ TE+H     I+ +  TLRQ   +WL  + + G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRWLQGYRKADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LESYQRWL++YRK++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEDETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +EDET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLMLSDVDFTrgvvnvrrgkggkervvpvgHAALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
             L+LS+VDF RGVV VR+GKG K+RVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRDGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQSVHAQTHPAEKRRTAKLAEQPDNAEPEAKPE  344
            LETTQIYTRVAIGHL+ VH QTHPAE++   K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 58.9 bits (204),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 42/112 (38%), Positives = 69/112 (62%), Gaps = 0/112 (0%)

Query  20   TLRQLTESWLSHLAAAGRSPRTVQGYGERVRAFLAWCEPRGIRYAPQVSLAVLESYQRWL  79
            TLRQ  ++ L +L   G S ++  +  ER+ +F++WCE +G+  A+QV+ ++L + Q+ L
Sbjct  13   TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  80   QGYRKADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKEERR  131
              YRKA+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P   +R
Sbjct  73   ARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

11) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  315 bits (1180),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 207/347 (60%), Positives = 272/347 (79%), Gaps = 7/347 (2%)

Query  3    RANPPTATENH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLSWCE  57
            R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHAALMWLGRYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIREGAHLKKAGACHIFRHTMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH+MATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 64.2 bits (224),  Expect = 9e-12, Method: Compositional matrix adjust.
 Identities = 43/115 (38%), Positives = 72/115 (63%), Gaps = 0/115 (0%)

Query  17   HGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLSWCEPRGITYAPQVSLAVLEAYQ  76
            H  TLRQ  ++ L +L++ G S ++  + +ER+ +F+SWCE +G+  A+QV+ ++L   Q
Sbjct  10   HPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQ  69

Query  77   RWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKEERR  131
            + L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P   +R
Sbjct  70   HYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

12) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  314 bits (1178),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 208/347 (60%), Positives = 272/347 (79%), Gaps = 7/347 (2%)

Query  3    RPNPPTATEIH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCE  57
            R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHTALMWLGRYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 64.2 bits (224),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 42/123 (35%), Positives = 75/123 (61%), Gaps = 0/123 (0%)

Query  9    ATEIHISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCEPRGITYAPQVS  68
            ++ +    H  TLRQ  ++ L +L++ G S ++  + +ER+ +F++WCE +G+  A+QV+
Sbjct  2    SSPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVT  61

Query  69   LAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKE  128
             ++L   Q+ L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P  
Sbjct  62   EPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDR  121

Query  129  ERR  131
             +R
Sbjct  122  KKR  124

13) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  312 bits (1171),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 206/347 (60%), Positives = 269/347 (78%), Gaps = 7/347 (2%)

Query  3    RXNPPTATEXH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLXWCE  57
            R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F+ WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdxvvpvgHAALMWLGRYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KD VVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIREGAHLKKAGACHIFRHXMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH MATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 63.4 bits (221),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 42/115 (37%), Positives = 71/115 (62%), Gaps = 0/115 (0%)

Query  17   HGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLXWCEPRGITYAPQVSLAVLEAYQ  76
            H  TLRQ  ++ L +L++ G S ++  + +ER+ +F+ WCE +G+  A+QV+ ++L   Q
Sbjct  10   HPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQ  69

Query  77   RWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKEERR  131
            + L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P   +R
Sbjct  70   HYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRKKR  124

14) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

15) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

16) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

17) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

18) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

19) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  311 bits (1166),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 207/346 (60%), Positives = 272/346 (79%), Gaps = 6/346 (1%)

Query  3    RPNPPTATESHISRQG-----QTLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCE  57
            R + P+ TE+H   ++      TLR+   +WL  + + G S RT ++Y ER+L+F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLAVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQR LR+YRK++G   +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  NLLLSdvdavrgvvnvrrgkggrdrvvpvgHTALIWLGRYLKDVRPRLAQRFDSGHLFIS  237
            NLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLGRSTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GL+R+TLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPDSAEPENTA  343
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +   AE+++  
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESDKPD  465


 Score = 59.5 bits (206),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 44/122 (37%), Positives = 79/122 (65%), Gaps = 2/122 (1%)

Query  12   SHISRQGQ--TLRRLAESWLAHLAAAGRSPRTVQGYRERVLAFLAWCEPRGIRYAPQVSL  69
            S + RQ++  TLR+  ++ L +L   G S ++  + +ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLESYQRYLRGYRKADGTLLAVNGQRHLLSAIRMLLRWLLQRHHILYNPAELLALPKEE  129
            ++L + Q+YL  YRKA+G   + ++QR+ L ++R+ + WL Q+H I  +PA  LA P   
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDRK  122

Query  130  RR  131
            +R
Sbjct  123  KR  124

20) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  307 bits (1150),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 204/347 (59%), Positives = 268/347 (78%), Gaps = 7/347 (2%)

Query  3    RPNPPTATEIH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCE  57
            R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITXAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILY  117
            +RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH ILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGXRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  G RNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHTALMWLGRYLKDVRPRLAQRFDSGXLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSG LFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIREGAHLKXAGACHIFRHXMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L  +GACH+FRH MATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 65.2 bits (228),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 42/123 (35%), Positives = 75/123 (61%), Gaps = 0/123 (0%)

Query  9    ATEIHISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCEPRGITXAPQVS  68
            ++ +    H  TLRQ  ++ L +L++ G S ++  + +ER+ +F++WCE +G+  A+QV+
Sbjct  2    SSPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVT  61

Query  69   LAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKE  128
             ++L   Q+ L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P  
Sbjct  62   EPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDR  121

Query  129  ERR  131
             +R
Sbjct  122  KKR  124

21) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  307 bits (1149),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 207/348 (60%), Positives = 272/348 (79%), Gaps = 7/348 (2%)

Query  2    TRPNPPTATEIH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWC  56
             R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WC
Sbjct  120  DRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWC  179

Query  57   EPRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVIL  116
            E+RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH IL
Sbjct  180  EARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHIL  239

Query  117  YNPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTEL  176
            YNP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+
Sbjct  240  YNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEV  299

Query  177  ANLLLSdvdavrgvvnvrrgkggrdrvvpvgNAALMWLARYLKDVRPRLAQRFDSGHLFI  236
            ANLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI
Sbjct  300  ANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFI  358

Query  237  SHKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHTMATQMLENGADTRHIQAILGHE  296
            ++KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH+MATQMLENGADTRHIQAILGHE
Sbjct  359  TRKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  418

Query  297  KLETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            KLETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  419  KLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 64.2 bits (224),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 42/123 (35%), Positives = 75/123 (61%), Gaps = 0/123 (0%)

Query  9    ATEIHISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCEPRGITYAPQVS  68
            ++ +    H  TLRQ  ++ L +L++ G S ++  + +ER+ +F++WCE +G+  A+QV+
Sbjct  2    SSPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVT  61

Query  69   LAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKE  128
             ++L   Q+ L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P  
Sbjct  62   EPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDR  121

Query  129  ERR  131
             +R
Sbjct  122  KKR  124

22) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  306 bits (1145),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 207/348 (60%), Positives = 271/348 (78%), Gaps = 7/348 (2%)

Query  2    TRPNPPTATEIH-----ISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWC  56
             R + P+ TE H     I+ +  TLRQ   +WL  +   G S RT ++Y ER+ +F++WC
Sbjct  120  DRKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWC  179

Query  57   EPRGITYAPQVSLAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVIL  116
            E+RG+  APQVSL++LE+YQRWL++YR+++G+     SQ + L+ +R  FRWLLQRH IL
Sbjct  180  EARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHIL  239

Query  117  YNPAELLALPKEERRLPAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTEL  176
            YNP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+
Sbjct  240  YNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEV  299

Query  177  ANLLLSdvdavrgvvnvrrgkggrdrvvpvgNAALMWLARYLKDVRPRLAQRFDSGHLFI  236
            ANLLLS+VD  RGVV VR+GKG +DRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI
Sbjct  300  ANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFI  358

Query  237  SHKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHXMATQMLENGADTRHIQAILGHE  296
            ++KG GLA+GTLT +A+ +IR  A+L K+GACH+FRH MATQMLENGADTRHIQAILGHE
Sbjct  359  TRKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHE  418

Query  297  KLETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLAEQPENAEPEVKPE  344
            KLETTQIYTRVAIGHL+KVH +THPAE++  +K + +  +AE++ KP+
Sbjct  419  KLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 64.5 bits (225),  Expect = 8e-12, Method: Compositional matrix adjust.
 Identities = 42/123 (35%), Positives = 75/123 (61%), Gaps = 0/123 (0%)

Query  9    ATEIHISRHGQTLRQLAESWLAHLVVAGRSPRTVQGYRERVRAFLAWCEPRGITYAPQVS  68
            ++ +    H  TLRQ  ++ L +L++ G S ++  + +ER+ +F++WCE +G+  A+QV+
Sbjct  2    SSPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVT  61

Query  69   LAVLEAYQRWLQGYRRADGKQLVVNSQLGVLTAIRMLFRWLLQRHVILYNPAELLALPKE  128
             ++L   Q+ L  YR+A+G+    +SQ   L ++R+ F WL Q+H I  +PA  LA P  
Sbjct  62   EPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPATTLASPDR  121

Query  129  ERR  131
             +R
Sbjct  122  KKR  124

23) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  298 bits (1118),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 211/350 (61%), Positives = 276/350 (79%), Gaps = 10/350 (2%)

Query  3    RPKPPTATESH-----ISRHGQTLRRLAESWLAHLAAAGRSARTVQGYGERVRAFLAWCE  57
            R K P+ TE+H     I+ +  TLR+   +WL  + + G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   LRGITYAPQVSLAVLEAYQRWLQSYRRADGRRLAVNGQRHLLSAIRMLLRWLLKRHHILY  117
             RG+  APQVSL++LE+YQRWL+SYR+++G+  +  +QR+ LS +R  +RWLL+RHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAellelpkeerrlpAQVFSEEETRRVLQSLDAGTPPGLRNRAILELLWSTGIRRTELA  177
            NP + L LPKEE+RLPAQV +E+ET+ VL + + +T  GLRNR ILE+LWSTGIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHAALMWLARYLKDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIREGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKRRTEKLKAQPDSAEPEAKPESPD  347
            LETTQIYTRVAIGHL+KVH +THPAE++  +K      S +P+A ++ PD
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQK----TPSDNPQAESDKPD  465


 Score = 49.5 bits (168),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 36/111 (33%), Positives = 72/111 (65%), Gaps = 2/111 (1%)

Query  12   SHISRHGQ--TLRRLAESWLAHLAAAGRSARTVQGYGERVRAFLAWCELRGITYAPQVSL  69
            S + R+++  TLR+  ++ L +L   G S ++  +  ER+ +F++WCE +G+  A+QV+ 
Sbjct  3    SPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTE  62

Query  70   AVLEAYQRWLQSYRRADGRRLAVNGQRHLLSAIRMLLRWLLKRHHILYNPA  120
            ++L   Q+ L  YR+A+G+  + ++QR+ L ++R+ + WL ++H I  +PA
Sbjct  63   PLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPA  113

24) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  293 bits (1098),  Expect = 8e-81, Method: Compositional matrix adjust.
 Identities = 209/347 (61%), Positives = 275/347 (80%), Gaps = 7/347 (2%)

Query  3    RPKPPTATEIH-----ISRHGQTLRQLAESWLSHLAAAGRSPRTVQGYRERVRALLAWCE  57
            R K P+ TE H     I+ +  TLRQ   +WL  + + G S RT ++Y ER+ ++++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGITYAPQVSLAVLESYQRWLQGYRRADGRQLAVNGQRHLLSAIRMLLRWLLQRHHILY  117
            +RG+  APQVSL++LESYQRWL++YR+++G+  +  +QR+ LS +R  +RWLLQRHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPAellelpkeerrlpAQVFSEAETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP + L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgHAALMWLGRYLQDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G+ AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRSGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQKVHAHTHPAEKGRTEQLAEQPDNAEPEAKPE  344
            LETTQIYTRVAIGHL+KVH +THPAE+   ++ + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 50.5 bits (172),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 36/112 (33%), Positives = 72/112 (65%), Gaps = 0/112 (0%)

Query  9    ATEIHISRHGQTLRQLAESWLSHLAAAGRSPRTVQGYRERVRALLAWCEPRGITYAPQVS  68
            ++ +    H  TLRQ  ++ L +L   G S ++  + +ER+ ++++WCE +G+  A+QV+
Sbjct  2    SSPVKRQSHPLTLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVT  61

Query  69   LAVLESYQRWLQGYRRADGRQLAVNGQRHLLSAIRMLLRWLLQRHHILYNPA  120
             ++L + Q+ L  YR+A+G+  + ++QR+ L ++R+ + WL Q+H I  +PA
Sbjct  62   EPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQQHAIPASPA  113

25) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  266 bits (996),  Expect = 8e-73, Method: Compositional matrix adjust.
 Identities = 213/347 (62%), Positives = 272/347 (79%), Gaps = 7/347 (2%)

Query  3    RPKPPTATESH-----ISQQGQTLRQLAESWLSHLAAAGRSPRTVQGYGERVRAFLAWCE  57
            R K P+ TE+H     I+ +  TLRQ   +WL  + + G S RT ++Y ER+ +F++WCE
Sbjct  121  RKKRPSVTETHGQPDAIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCE  180

Query  58   PRGIRYAPQVSLVVLESYQRWLQSYRRADGRHLVVNGQrhllsalrgllrwllkrhhILY  117
            +RG+  APQVSL +LESYQRWL+SYR+++G+     +QR+ LS LR  +RWLL+RHHILY
Sbjct  181  ARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILY  240

Query  118  NPADllelpkeerrlpAQVFSESETRRVLQSLDAGTPPGLRNRAILELLWSSGIRRSELA  177
            NP D L LPKEE+RLPAQV +E ET+ VL + + +T  GLRNR ILE+LWS+GIRR E+A
Sbjct  241  NPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVA  300

Query  178  GLLLSDVDFTrgvvnvrrgkggkdrvvpvgYAALMWLGRYLQDVRPRLAQRFDSGHLFIS  237
             LLLS+VDF RGVV VR+GKG KDRVVP+G  AL WL+R L  VRP+L++R DSGHLFI+
Sbjct  301  NLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQLTRRGDSGHLFIT  359

Query  238  HKGTGLAHGTLTAMAGRAIRDGAHLKKAGACHIFRHSMATQMLENGADTRHIQAILGHEK  297
            +KG GLA+GTLT +A+ +IR  A+L K+GACH+FRHSMATQMLENGADTRHIQAILGHEK
Sbjct  360  RKGRGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  298  LETTQIYTRVAIGHLQSVHAQTHPAEKRRTAKLAEQPDNAEPEAKPE  344
            LETTQIYTRVAIGHL+ VH QTHPAE++   K + +  +AE++ KP+
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDNPQAESD-KPD  465


 Score = 44.0 bits (147),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/76 (35%), Positives = 48/76 (64%), Gaps = 0/76 (0%)

Query  20  TLRQLAESWLSHLAAAGRSPRTVQGYGERVRAFLAWCEPRGIRYAPQVSLVVLESYQRWL  79
           TLRQ  ++ L +L   G S ++  +  ER+ +F++WCE +G+  A+QV+  +L + Q+ L
Sbjct  13  TLRQHLDAYLDNLLLQGASQKSQSARHERLSPFVSWCEEQGVISAAQVTEPLLANWQHYL  72

Query  80  QSYRRADGRHLVVNGQ  95
             YR+A+G+    ++Q
Sbjct  73  ARYRKANGQPYTPDSQ  88

26) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  214 bits (795),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 145/349 (42%), Positives = 221/349 (64%), Gaps = 16/349 (4%)

Query  6    PAANRLLSVDDIYRQPVGPAHDPKSLYALLLRFVKWRRE-RNWSET----TLKVQTHHGY  60
            ++A  L S D   R +V  +H+     A+  RF   R++   W E+     L  +T+++Y
Sbjct  111  SPATTLASPDRKKRPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESY  168

Query  61   -----RFICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVW  115
                  F+ W + RG+  A++V+ P+LE  QR L  YRK NG+P SP +QR  L  L+ W
Sbjct  169  EERLLPFVTWCEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQW  228

Query  116  FRWLAKQNLILANPAADLELPRLEKHLPRTILSVEQVEDIVNLCDLNTLQGMRDRALLEL  175
            FRWL +++ IL NP   L LP+ EK+LP  +++ ++ + ++   +++TL G+R+R +LE+
Sbjct  229  FRWLLQRHHILYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEV  288

Query  176  LWSTGIRRGEVARLETWSADFSRKILTIVQGKGKQDRVIPVGERALWWLRHYLHEVRPEI  235
            LWSTGIRR EVA L     DF+R ++ + QGKG++DRV+P+GE+AL WL + L  VRP++
Sbjct  289  LWSTGIRRMEVANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQL  347

Query  236  VAVAGCKALFVAMDGVAGLTANGITHAVVPYLRAAG--IEKGSCHLFRHAMATQMLENGA  293
               ++   LF++  G  GL+   +T+     +R  +     G+CHLFRH+MATQMLENGA
Sbjct  348  TRRGDSGHLFITRKG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGA  406

Query  294  DLRWIQAMLGHRSVESTQIYTQVSIKALQAVHASTHPAEREADSEHKGE  342
            D R IQA+LGH  +E+TQIYT+V+I  L+ VH  THPAER ++    ++
Sbjct  407  DTRHIQAILGHEKLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSD  455


 Score = 65.2 bits (228),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  62   FICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVWFRWLAK  121
            F+ W +E+G+  AA+VT P+L  WQ+ L RYRK+NG+P +P +QR  L++L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADLELP  136
            Q+ I A+PA+ L  P
Sbjct  105  QHAIPASPATTLASP  119

27) xerC in NC_017445


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  212 bits (787),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 144/346 (42%), Positives = 220/346 (64%), Gaps = 16/346 (4%)

Query  6    PAANRLLSVDEVYRQPVGPAHDPKSLYALLLRFVKWRRE-RNWSET----TLKVQTHHGY  60
            ++A  L S D   R +V  +H+     A+  RF   R++   W E+     L  +T+++Y
Sbjct  111  SPATTLASPDRKKRPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESY  168

Query  61   -----RFICWAQERGIHHAADVTRPVLERWQRHLWQYRKANGEPLSPRTQRTALQPLQVW  115
                  F+ W + RG+  A++V+ P+LE  QR L+ YRK+NG+P SP +QR  L  L+ W
Sbjct  169  EERLLPFVTWCEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQW  228

Query  116  FRWLAKQNLILANPAADLELPRLEKHLPRTILSVEQVEETVNLCDLTTLQGMRDRALLEL  175
            FRWL +++ IL NP   L LP+ EK+LP  +++ ++ +  +   ++ TL G+R+R +LE+
Sbjct  229  FRWLLQRHHILYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEV  288

Query  176  LWSTGIRRGEVARLETWSADFSRKILTIVQGKGKQDRVIPVGERALWWLRHYLHEVRPEI  235
            LWSTGIRR EVA L     DF+R ++ + QGKG++DRV+P+GE+AL WL + L  VRP++
Sbjct  289  LWSTGIRRMEVANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQL  347

Query  236  VAVAGCKALFVAMDGVAGLTANGITHAVVPYLRAAG--IEKGSCHLFRHAMATQMLENGA  293
               ++   LF++  G  GL+   +T+     +R  +     G+CHLFRH+MATQMLENGA
Sbjct  348  TRRGDSGHLFITRKG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGA  406

Query  294  DLRWIQAMLGHRSVESTQIYTQVSIRALQAVHASTHPAEQTEADNS  339
            D R IQA+LGH  +E+TQIYT+V+I  L+ VH  THPAE+   +++
Sbjct  407  DTRHIQAILGHEKLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKT  452


 Score = 62.4 bits (217),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  62   FICWAQERGIHHAADVTRPVLERWQRHLWQYRKANGEPLSPRTQRTALQPLQVWFRWLAK  121
            F+ W +E+G+  AA+VT P+L  WQ+ L +YRKANG+P +P +QR  L++L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADLELP  136
            Q+ I A+PA+ L  P
Sbjct  105  QHAIPASPATTLASP  119

28) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  211 bits (785),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 144/349 (42%), Positives = 220/349 (64%), Gaps = 16/349 (4%)

Query  6    PAANRLLSVDDIYRQPVGPAHDPKSLYALLLRFVKWRRE-RNWSET----TLKVQTHHGY  60
            ++A  L S D   R +V  +H+     A+  RF   R++   W E+     L  +T+++Y
Sbjct  111  SPATTLASPDRKKRPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESY  168

Query  61   -----RFICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVW  115
                  F+ W + RG+  A++V+ P+LE  QR L  YRK NG+P SP +QR  L  L+ W
Sbjct  169  EERLLPFVTWCEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQW  228

Query  116  FRWLAKQNLILANPAADLELPRLEKHLPRTILSVEQVEDIVNLCDLNTLQGMRDRALLEL  175
            FRWL +++ IL NP   L LP+ EK+LP  +++ ++ + ++   +++TL G+R+R +LE+
Sbjct  229  FRWLLQRHHILYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEV  288

Query  176  LWSTGIRRGEVARLETWSADFSRKILTIVQGKGKQDRVIPVGERALWWLRHYLHEVRPEI  235
            LWSTGIRR EVA L     DF+R ++ + QGKG++DRV+P+GE+AL WL + L  VRP++
Sbjct  289  LWSTGIRRMEVANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQL  347

Query  236  VAVAGCKALFVAMDGVAGLTANGITHAVVPYLRAAG--IEKGSCXLFRHAMATQMLENGA  293
               ++   LF++  G  GL+   +T+     +R  +     G+C LFRH+MATQMLENGA
Sbjct  348  TRRGDSGHLFITRKG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGA  406

Query  294  DLRWIQAMLGHRSVESTQIYTQVSIKALQAVHASTHPAEREADSEHKGE  342
            D R IQA+LGH  +E+TQIYT+V+I  L+ VH  THPAER ++    ++
Sbjct  407  DTRHIQAILGHEKLETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSD  455


 Score = 65.2 bits (228),  Expect = 5e-12, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  62   FICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVWFRWLAK  121
            F+ W +E+G+  AA+VT P+L  WQ+ L RYRK+NG+P +P +QR  L++L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADLELP  136
            Q+ I A+PA+ L  P
Sbjct  105  QHAIPASPATTLASP  119

29) xerC in NC_012214


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  211 bits (785),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 144/344 (42%), Positives = 219/344 (64%), Gaps = 16/344 (4%)

Query  6    PAANRLLSVDDIYRQPVGPAHDPKSLYALLLRFVKWRRE-RNWSET----TLKVQTHHGY  60
            ++A  L S D   R +V  +H+     A+  RF   R++   W E+     L  +T+++Y
Sbjct  111  SPATTLASPDRKKRPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESY  168

Query  61   -----RFICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVW  115
                  F+ W + RG+  A++V+ P+LE  QR L  YRK NG+P SP +QR  L  L+ W
Sbjct  169  EERLLPFVTWCEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQW  228

Query  116  FRWLAKQNLILANPAADLELPRLEKHLPRTILSVEQVEDIVNLCDLNTLQGMRDRALLEL  175
            FRWL +++ IL NP   L LP+ EK+LP  +++ ++ + ++   +++TL G+R+R +LE+
Sbjct  229  FRWLLQRHHILYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEV  288

Query  176  LWSTGIRRGEVARLETWSADFSRKILTIVQGKGKQDRVIPVGERALWWLRHYLHEVRPEI  235
            LWSTGIRR EVA L     DF+R ++ + QGKG++DRV+P+GE+AL WL + L  VRP++
Sbjct  289  LWSTGIRRMEVANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQL  347

Query  236  VAVAGCKALFVAMDGVAGLTANGITHAVVPYLRAAG--IEKGSCHLFRHAMATQMLENGA  293
               ++   LF++  G  GL+   +T+     +R  +     G+CHLFRH+MATQMLENGA
Sbjct  348  TRRGDSGHLFITRKG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGA  406

Query  294  DLRWIQAMLGHRSVESTQIYTQVSIRALQAVHASTHPAEQTEDE  337
            D R IQA+LGH  +E+TQIYT+V+I  L+ VH  THPAE+  ++
Sbjct  407  DTRHIQAILGHEKLETTQIYTRVAIGHLKKVHEQTHPAERKPEQ  450


 Score = 65.5 bits (229),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  62   FICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVWFRWLAK  121
            F+ W +E+G+  AA+VT P+L  WQ+ L RYRK+NG+P +P +QR  L++L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADLELP  136
            Q+ I A+PA+ L  P
Sbjct  105  QHAIPASPATTLASP  119

30) xerD in NC_017390


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  207 bits (768),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 142/344 (42%), Positives = 217/344 (64%), Gaps = 16/344 (4%)

Query  6    PAANRLLSVDDIYRQPVGPAHDPKSLYALLLRFVKWRRE-RNWSET----TLKVQTHHGY  60
            ++A  L S D   R +V  +H+     A+  RF   R++   W E+     L  +T+++Y
Sbjct  111  SPATTLASPDRKKRPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESY  168

Query  61   -----RFICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVW  115
                  F+ W + RG+  A++V+ P+LE  QR L  YRK NG+P SP +QR  L  L+ W
Sbjct  169  EERLLPFVTWCEARGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQW  228

Query  116  FRWLAKQNLILANPAADLELPRLEKHLPRTILSVEQVEDIVNLCDLNTLQGMRDRALLEL  175
            FRWL +++ IL NP   L LP+ EK+LP  +++ ++ + ++   +++TL G+R+R +LE+
Sbjct  229  FRWLLQRHHILYNPVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEV  288

Query  176  LWSTGIRRGEVARLETWSADFSRKILTIVQGKGKQDRVIPVGERALWWLRHYLHEVRPEI  235
            LWSTGIRR EVA L     DF+R ++ + QGKG++DRV+P+GE+AL WL + L  VRP++
Sbjct  289  LWSTGIRRMEVANLLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRWL-SVRPQL  347

Query  236  VAVAGCKALFVAMDGVAGLTANGITHAVVPYLRAAG--IEKGSCXLFRHAMATQMLENGA  293
               ++   LF++  G  GL+   +T+     +R  +     G+C LFRH+MATQMLENGA
Sbjct  348  TRRGDSGHLFITRKG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGA  406

Query  294  DLRWIQAMLGHRSVESTQXYTQVSIRALQAVHASTHPAEQTEDE  337
            D R IQA+LGH  +E+TQ YT+V+I  L+ VH  THPAE+  ++
Sbjct  407  DTRHIQAILGHEKLETTQIYTRVAIGHLKKVHEQTHPAERKPEQ  450


 Score = 65.5 bits (229),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 55/75 (74%), Gaps = 0/75 (0%)

Query  62   FICWAQERGIHHAADVTRPVLERWQRHLYRYRKGNGEPLSPRTQRTALQPLQVWFRWLAK  121
            F+ W +E+G+  AA+VT P+L  WQ+ L RYRK+NG+P +P +QR  L++L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADLELP  136
            Q+ I A+PA+ L  P
Sbjct  105  QHAIPASPATTLASP  119

31) xerC in NC_005126


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  207 bits (768),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 148/337 (44%), Positives = 220/337 (66%), Gaps = 15/337 (4%)

Query  19   RQPVGPAHDPKSLYALLLRFVVWRQE-RSWSES----TLKVQTHHTYH-----FILWATE  68
            R +V  +H+     A+  RF   RQ+  +W E+     L  +T+++Y+     F+ W   
Sbjct  124  RPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEA  181

Query  69   RGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTKQNLILAN  128
            RG+  A++++ P+LE YQR L  YRKTNG+P S  +QR +L  L+ WF+WL +++ IL N
Sbjct  182  RGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYN  241

Query  129  PAADIELPRLEKHLPRYILTIDETEQILAQPDLTTLQGIRDRALMELLWSTGMRRGELTR  188
            P   + LP+ EK+LP  ++  DET+ +LA +++ TL G+R+R ++E+LWSTG+RR E++ 
Sbjct  242  PVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVAN  301

Query  189  LDVYSVDGKRKTVTIRQGKGNKDRVLPLGERALSWLQRYQQQVRPQLIVNPDVKALFVAM  248
            L +  VD  R  V +RQGKGNKDRV+P+GE+AL WL R    VRPQL    D   LF++ 
Sbjct  302  LLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRW-LSVRPQLTRRGDSGHLFITR  360

Query  249  DGLDGLQANGISNLVTAYI-NAVGIEKKGACHLFRHAMATQMLENGADLRWIQAMLGHAS  307
             G  GL    ++++ +  I +   + K GACHLFRH+MATQMLENGAD R IQA+LGH  
Sbjct  361  KG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  308  VESTQVYTQVSIRALQAVHASTHPAEQMADEKVRDAD  344
            +E+TQ+YT+V+I  L+ VH  THPAE+ +++K    +
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDN  456


 Score = 40.8 bits (135),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 53/75 (71%), Gaps = 0/75 (0%)

Query  62   FILWATERGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTK  121
            F+ W  E+G+  AA++T P+L   Q+YL +YRK+NG+P +  +QR +L +L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADIELP  136
            Q+ I A+PA+ +  P
Sbjct  105  QHAIPASPATTLASP  119

32) xerC in NC_005126


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  207 bits (768),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 148/337 (44%), Positives = 220/337 (66%), Gaps = 15/337 (4%)

Query  19   RQPVGPAHDPKSLYALLLRFVVWRQE-RSWSES----TLKVQTHHTYH-----FILWATE  68
            R +V  +H+     A+  RF   RQ+  +W E+     L  +T+++Y+     F+ W   
Sbjct  124  RPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEA  181

Query  69   RGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTKQNLILAN  128
            RG+  A++++ P+LE YQR L  YRKTNG+P S  +QR +L  L+ WF+WL +++ IL N
Sbjct  182  RGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYN  241

Query  129  PAADIELPRLEKHLPRYILTIDETEQILAQPDLTTLQGIRDRALMELLWSTGMRRGELTR  188
            P   + LP+ EK+LP  ++  DET+ +LA +++ TL G+R+R ++E+LWSTG+RR E++ 
Sbjct  242  PVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVAN  301

Query  189  LDVYSVDGKRKTVTIRQGKGNKDRVLPLGERALSWLQRYQQQVRPQLIVNPDVKALFVAM  248
            L +  VD  R  V +RQGKGNKDRV+P+GE+AL WL R    VRPQL    D   LF++ 
Sbjct  302  LLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRW-LSVRPQLTRRGDSGHLFITR  360

Query  249  DGLDGLQANGISNLVTAYI-NAVGIEKKGACHLFRHAMATQMLENGADLRWIQAMLGHAS  307
             G  GL    ++++ +  I +   + K GACHLFRH+MATQMLENGAD R IQA+LGH  
Sbjct  361  KG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  308  VESTQVYTQVSIRALQAVHASTHPAEQMADEKVRDAD  344
            +E+TQ+YT+V+I  L+ VH  THPAE+ +++K    +
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDN  456


 Score = 40.8 bits (135),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 53/75 (71%), Gaps = 0/75 (0%)

Query  62   FILWATERGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTK  121
            F+ W  E+G+  AA++T P+L   Q+YL +YRK+NG+P +  +QR +L +L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADIELP  136
            Q+ I A+PA+ +  P
Sbjct  105  QHAIPASPATTLASP  119

33) xerC in NC_005126


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 148/337 (44%), Positives = 219/337 (65%), Gaps = 15/337 (4%)

Query  19   RQPVGPAHDPKSLYALLLRFVVWRQE-RNWSES----TLKVQTHHTYH-----FILWATE  68
            R +V  +H+     A+  RF   RQ+   W E+     L  +T+++Y+     F+ W   
Sbjct  124  RPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEA  181

Query  69   RGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTKQNLILAN  128
            RG+  A++++ P+LE YQR L  YRKTNG+P S  +QR +L  L+ WF+WL +++ IL N
Sbjct  182  RGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYN  241

Query  129  PAADIELPRLEKHLPRYILTIDETEQILAQPDLTTLQGIRDRALMELLWSTGMRRGELTR  188
            P   + LP+ EK+LP  ++  DET+ +LA +++ TL G+R+R ++E+LWSTG+RR E++ 
Sbjct  242  PVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVAN  301

Query  189  LDVYSVDGKRKTVTIRQGKGNKDRVLPLGERALSWLQRYQQQVRPQLIVNPDVKALFVAM  248
            L +  VD  R  V +RQGKGNKDRV+P+GE+AL WL R    VRPQL    D   LF++ 
Sbjct  302  LLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRW-LSVRPQLTRRGDSGHLFITR  360

Query  249  DGLDGLQANGISNLVTAYI-NAVGIEKKGACHLFRHAMATQMLENGADLRWIQAMLGHAS  307
             G  GL    ++++ +  I +   + K GACHLFRH+MATQMLENGAD R IQA+LGH  
Sbjct  361  KG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  308  VESTQVYTQVSIRALQAVHASTHPAEQMADEKVRDAD  344
            +E+TQ+YT+V+I  L+ VH  THPAE+ +++K    +
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDN  456


 Score = 40.8 bits (135),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 53/75 (71%), Gaps = 0/75 (0%)

Query  62   FILWATERGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTK  121
            F+ W  E+G+  AA++T P+L   Q+YL +YRK+NG+P +  +QR +L +L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADIELP  136
            Q+ I A+PA+ +  P
Sbjct  105  QHAIPASPATTLASP  119

34) xerC in NC_005126


> AY144117|11|G11|27497173|AAN64203.1|Photorhabdus_luminescens_W14|+|17602..18999|int|-|Int
Length=465

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 148/337 (44%), Positives = 219/337 (65%), Gaps = 15/337 (4%)

Query  19   RQPVGPAHDPKSLYALLLRFVVWRQE-RNWSES----TLKVQTHHTYH-----FILWATE  68
            R +V  +H+     A+  RF   RQ+   W E+     L  +T+++Y+     F+ W   
Sbjct  124  RPSVTETHGQPD--AIPARFATLRQHLAAWLEAVQGQGLSERTQESYEERLLPFVTWCEA  181

Query  69   RGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTKQNLILAN  128
            RG+  A++++ P+LE YQR L  YRKTNG+P S  +QR +L  L+ WF+WL +++ IL N
Sbjct  182  RGVMTAPQVSLPLLESYQRWLRSYRKTNGQPYSPGSQRDRLSVLRQWFRWLLQRHHILYN  241

Query  129  PAADIELPRLEKHLPRYILTIDETEQILAQPDLTTLQGIRDRALMELLWSTGMRRGELTR  188
            P   + LP+ EK+LP  ++  DET+ +LA +++ TL G+R+R ++E+LWSTG+RR E++ 
Sbjct  242  PVDSLVLPKEEKRLPAQVMNEDETHTVLAAANIDTLTGLRNRVILEVLWSTGIRRMEVAN  301

Query  189  LDVYSVDGKRKTVTIRQGKGNKDRVLPLGERALSWLQRYQQQVRPQLIVNPDVKALFVAM  248
            L +  VD  R  V +RQGKGNKDRV+P+GE+AL WL R    VRPQL    D   LF++ 
Sbjct  302  LLLSEVDFGRGVVLVRQGKGNKDRVVPIGEQALHWLSRW-LSVRPQLTRRGDSGHLFITR  360

Query  249  DGLDGLQANGISNLVTAYI-NAVGIEKKGACHLFRHAMATQMLENGADLRWIQAMLGHAS  307
             G  GL    ++++ +  I +   + K GACHLFRH+MATQMLENGAD R IQA+LGH  
Sbjct  361  KG-RGLARGTLTQIAADSIRKQAQLAKPGACHLFRHSMATQMLENGADTRHIQAILGHEK  419

Query  308  VESTQVYTQVSIRALQAVHASTHPAEQMADEKVRDAD  344
            +E+TQ+YT+V+I  L+ VH  THPAE+ +++K    +
Sbjct  420  LETTQIYTRVAIGHLKKVHEQTHPAERKPEQKTPSDN  456


 Score = 40.8 bits (135),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 32/75 (43%), Positives = 53/75 (71%), Gaps = 0/75 (0%)

Query  62   FILWATERGLYYAADITRPILEryqrylyqyrKTNGEPLSTRTQRTQLEPLKVWFKWLTK  121
            F+ W  E+G+  AA++T P+L   Q+YL +YRK+NG+P +  +QR +L +L++WF WL +
Sbjct  45   FVSWCEEQGVISAAQVTEPLLANWQHYLARYRKANGQPYTPDSQRRRLRSLRLWFDWLQQ  104

Query  122  QNLILANPAADIELP  136
            Q+ I A+PA+ +  P
Sbjct  105  QHAIPASPATTLASP  119