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Homologs of unnamed gene of AF311901

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) grlR
( YP_003366512.1 )

GrlR, global regulator of LEE repressor

NC_013716
(Citrobacter rodentium ICC168)

7e-48

100

2) grlR
( YP_003232143.1 )

negative regulator GrlR

NC_013361
(Escherichia coli 11368)

1e-45

3) grlR
( YP_003223485.1 )

negative regulator GrlR

NC_013353
(Escherichia coli 12009)

3e-45

4) grlR
( YP_002331420.1 )

negative regulator GrlR

NC_011601
(Escherichia coli E2348/69)

1e-43

5) grlR
( YP_003236098.1 )

negative regulator GrlR

NC_013364
(Escherichia coli 11128)

1e-43

6) G2583_4433
( YP_003501884.1 )

hypothetical protein

NC_013941
(Escherichia coli CB9615)

1e-43

7) ECH74115_5070
( YP_002273174.1 )

negative regulator GrlR

NC_011353
(Escherichia coli EC4115)

1e-43

8) Z5129
( NP_290278.1 )

negative regulator GrlR

NC_002655
(Escherichia coli EDL933)

1e-43

9) ECO55CA74_21265
( YP_006161358.1 )

negative regulator GrlR

NC_017656
(Escherichia coli RM12579)

1e-43

10) ECs4578
( NP_312605.1 )

negative regulator GrlR

NC_002695
(Escherichia coli Sakai)

1e-43

11) grlR
( YP_003080490.1 )

negative regulator GrlR

NC_013008
(Escherichia coli TW14359)

1e-43

12) CDCO157_4313
( YP_006315178.1 )

negative regulator GrlR

NC_017906
(Escherichia coli Xuzhou21)

1e-43

13) A464_300
( YP_008320896.1 )

Orf10

NC_021870
(Salmonella bongori N268-08)

7e-14

14) SBG_0304
( YP_004729214.1 )

hypothetical protein

NC_015761
(Salmonella bongori NCTC 12419)

7e-14

• Sequence Alignments

1) grlR in NC_013716


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  183 bits (677),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60
            MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112
            SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

2) grlR in NC_013361


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  175 bits (648),  Expect = 1e-45, Method: Compositional matrix adjust.
 Identities = 103/112 (92%), Positives = 109/112 (98%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNLITGGDIASVYQGVLSEEEDIILHVHRYNHEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGNLITGGDI+SVYQG L+EEEDII+HVHRYNHEIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDSNVTLHCHVRGNEKLFVDVYARFIEPLIIKN  114
            SVL+IEQDYQLVIPKK+LSND+NVTLHCHVRGNEKLFVDVY RFIEPLIIKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

3) grlR in NC_013353


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  174 bits (644),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 102/112 (92%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNLITGGDIASVYQGVLSEEEDIILHVHRYNHEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGNLITGGDI+SVYQG L+EEEDII+HVHRYNHEIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDSNVTLHCHVRGNEKLFVDVYARFIEPLTIKN  114
            SVL+IEQDYQLVIPKK+LSND+NVTLHCHVRGNEKLFVDVY RFIEPL IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

4) grlR in NC_011601


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 99/112 (89%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLIIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPLIIKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

5) grlR in NC_013364


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (623),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 99/112 (89%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLIIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPLIIKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

6) ECH74115_5070 in NC_011353


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

7) Z5129 in NC_002655


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

8) ECs4578 in NC_002695


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

9) grlR in NC_013008


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

10) G2583_4433 in NC_013941


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

11) ECO55CA74_21265 in NC_017656


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

12) CDCO157_4313 in NC_017906


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score =  168 bits (622),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/112 (88%), Positives = 108/112 (97%), Gaps = 0/112 (0%)

Query  3    MKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIP  62
            MKDGIYSI FISNEDSCGEGILIKNGN+ITGGDI+SVYQG L+E+EDII+HVHRYN EIP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  63   SVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLVIKN  114
            SVL+IEQDYQLVIPKK+LSNDNN+TLHCHVRGNEKLFVDVY +FIEPL+IKN
Sbjct  61   SVLSIEQDYQLVIPKKILSNDNNVTLHCHVRGNEKLFVDVYVRFIEPLIIKN  112

13) SBG_0304 in NC_015761


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score = 70.2 bits (247),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 45/110 (41%), Positives = 71/110 (65%), Gaps = 2/110 (1%)

Query  1    MKDGVYHVAFTSNRGSVGEGILVLCCGLVNGGDIGFVYQGKLARPE-MTLRITRYYDGIP  59
            MKDG+Y ++F SN +S GEGIL+    L+ GGDI+ VYQG L+  E + +++ RY + IP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  60   SVLGIENDYELELLMQYSNETEGKYMLHGYVREYPELTIDACASFLMPML  109
            SVL+IE+DY+L +  +  ++ + +  LH  VR    L +D    F+ P++
Sbjct  61   SVLSIEQDYQLVIPKKILSN-DNNVTLHCHVRGNEKLFVDVYVRFIEPLI  109

14) A464_300 in NC_021870


> AF311901|11|G11|15723912|AAL06359.1|Citrobacter_rodentium_DBS100|+|8711..9049|-|-|unknown
Length=112

 Score = 70.2 bits (247),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 45/110 (41%), Positives = 71/110 (65%), Gaps = 2/110 (1%)

Query  1    MKDGVYHVAFTSNRGSVGEGILVLCCGLVNGGDIGFVYQGKLARPE-MTLRITRYYDGIP  59
            MKDG+Y ++F SN +S GEGIL+    L+ GGDI+ VYQG L+  E + +++ RY + IP
Sbjct  1    MKDGIYSITFISNEDSCGEGILIKNGNLITGGDISSVYQGGLTEEEDIIFHVHRYNHEIP  60

Query  60   SVLGIENDYELELLMQYSNETEGKYMLHGYVREYPELTIDACASFLMPML  109
            SVL+IE+DY+L +  +  ++ + +  LH  VR    L +D    F+ P++
Sbjct  61   SVLSIEQDYQLVIPKKILSN-DNNVTLHCHVRGNEKLFVDVYVRFIEPLI  109