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PAthogenisity Island DataBase (PAI DB)

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Homologs of cigR gene of AF106566

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SeD_A4154
( YP_002217717.1 )

inner membrane protein

NC_011205
(Salmonella enterica CT_02021853)

2e-51

2) SPAB_04673
( YP_001590817.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-51

3) SNSL254_A4040
( YP_002043007.1 )

hypothetical protein

NC_011080
(Salmonella enterica SL254)

2e-51

4) SN31241_1180
( YP_008358037.1 )

CigR

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-51

5) cigR
( YP_002639355.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

3e-51

6) cigR
( YP_005399082.1 )

inner membrane protein

NC_017046
(Salmonella enterica 798)

1e-50

100

7) SU5_04238
( YP_006089833.1 )

Putative inner membrane protein

NC_017623
(Salmonella enterica B182)

1e-50

100

8) SeSA_A3967
( YP_002116701.1 )

hypothetical protein

NC_011094
(Salmonella enterica CVM19633)

1e-50

100

9) SeHA_C4091
( YP_002047792.1 )

hypothetical protein

NC_011083
(Salmonella enterica SL476)

1e-50

100

10) cigR
( YP_005244750.1 )

putative inner membrane protein

NC_016857
(Salmonella enterica ST4/74)

1e-50

100

11) SBOV38501
( YP_008507652.1 )

conserved hypothetical protein

NC_022241
(Salmonella enterica 3114)

1e-50

12) SE451236_02110
( YP_008263496.1 )

membrane protein

NC_021820
(Salmonella enterica 08-1736)

9e-51

100

13) cigR
( YP_005240011.1 )

putative inner membrane protein

NC_016856
(Salmonella enterica 14028S)

9e-51

100

14) SEEH1578_04955
( YP_008245064.1 )

hypothetical protein

NC_021810
(Salmonella enterica 41578)

9e-51

100

15) SSPA3374
( YP_002144211.1 )

inner membrane protein

NC_011147
(Salmonella enterica AKU12601)

9e-51

100

16) cigR
( YP_152722.1 )

inner membrane protein

NC_006511
(Salmonella enterica ATCC 9150)

9e-51

100

17) SEEB0189_01075
( YP_008306586.1 )

membrane protein

NC_021844
(Salmonella enterica CFSAN000189)

9e-51

100

18) CFSAN001921_21640
( YP_008257626.1 )

membrane protein

NC_021814
(Salmonella enterica CFSAN001921)

9e-51

100

19) CFSAN002069_13230
( YP_008251427.1 )

membrane protein

NC_021812
(Salmonella enterica CFSAN002069)

9e-51

100

20) STMMW_37511
( YP_005234760.1 )

putative inner membrane protein

NC_016854
(Salmonella enterica D23580)

9e-51

100

21) cigR
( NP_462661.1 )

inner membrane protein

NC_003197
(Salmonella enterica LT2)

9e-51

100

22) cigR
( YP_002245645.1 )

inner membrane protein

NC_011294
(Salmonella enterica P125109)

9e-51

100

23) cigR
( YP_005183604.1 )

putative inner membrane protein

NC_016810
(Salmonella enterica SL1344)

9e-51

100

24) STMDT12_C38180
( YP_005249514.1 )

putative inner membrane protein

NC_016860
(Salmonella enterica T000240)

9e-51

100

25) STU288_19005
( YP_007904886.1 )

hypothetical protein

NC_021151
(Salmonella enterica U288)

9e-51

100

26) cigR
( YP_005254227.1 )

putative inner membrane protein

NC_016863
(Salmonella enterica UK-1)

9e-51

100

27) CFSAN001992_14840
( YP_007472696.1 )

hypothetical protein

NC_020307
(Salmonella enterica CFSAN001992)

9e-51

28) CFSAN002050_01705
( YP_008258329.1 )

membrane protein

NC_021818
(Salmonella enterica CFSAN002050)

2e-50

29) cigR
( YP_218670.1 )

inner membrane protein

NC_006905
(Salmonella enterica SC-B67)

2e-50

30) cigR
( YP_004732140.1 )

hypothetical protein

NC_015761
(Salmonella bongori NCTC 12419)

7e-49

31) A464_3831
( YP_008324425.1 )

Putative inner membrane protein

NC_021870
(Salmonella bongori N268-08)

1e-48

32) SeAg_B3986
( YP_002148697.1 )

hypothetical protein

NC_011149
(Salmonella enterica SL483)

2e-48

33) SARI_03872
( YP_001572808.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

9e-48

34) I137_18245
( YP_008382978.3 )

membrane protein

NC_021984
(Salmonella enterica S06004)

5e-45

35) cigR
( YP_008483330.1 )

putative inner membrane protein

NC_022221
(Salmonella enterica CDC1983-67)

8e-45

36) cigR
( YP_005214871.1 )

putative inner membrane protein

NC_016831
(Salmonella enterica RKS5078)

8e-45

37) cigR
( YP_002228443.1 )

hypothetical protein

NC_011274
(Salmonella enterica 287/91)

9e-45

38) ROD_41231
( YP_003367541.1 )

hypothetical protein

NC_013716
(Citrobacter rodentium ICC168)

3e-40

39) TY21A_19055
( YP_007928000.1 )

putative inner membrane protein

NC_021176
(Salmonella enterica Ty21a)

1e-28

100

40) STBHUCCB_39590
( YP_005219409.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

2e-28

100

• Sequence Alignments

1) SeD_A4154 in NC_011205


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  194 bits (722),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 157/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLanpgngnggghsnnaanqgnngnghkgnagQRTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQ+TEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

2) SNSL254_A4040 in NC_011080


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  194 bits (722),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 157/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLanpgngnggghsnnaanqgnngnghkgnagQRTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQ+TEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

3) SN31241_1180 in NC_021902


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  194 bits (722),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 157/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLanpgngnggghsnnaanqgnngnghkgnagQRTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQ+TEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

4) SPAB_04673 in NC_010102


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  194 bits (722),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 157/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSVTPVLanpgngnggghsnnaanqgnngnghkgnagQKTEH  60
            MNNRRGLTAVLATLITFSLS TPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

5) cigR in NC_012125


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  194 bits (720),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 156/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLanpgngnggghsnnaanqgnngnghkgnagQRTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQ+TEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWRIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEW+IVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

6) SU5_04238 in NC_017623


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

7) SeHA_C4091 in NC_011083


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

8) SeSA_A3967 in NC_011094


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

9) cigR in NC_017046


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

10) cigR in NC_016857


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

11) SBOV38501 in NC_022241


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (712),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLTRGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNL+RGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

12) SE451236_02110 in NC_021820


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

13) SEEB0189_01075 in NC_021844


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

14) cigR in NC_011294


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

15) SEEH1578_04955 in NC_021810


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

16) CFSAN002069_13230 in NC_021812


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

17) SSPA3374 in NC_011147


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

18) cigR in NC_006511


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

19) cigR in NC_016856


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

20) STMMW_37511 in NC_016854


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

21) cigR in NC_003197


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

22) cigR in NC_016810


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

23) STMDT12_C38180 in NC_016860


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

24) STU288_19005 in NC_021151


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

25) cigR in NC_016863


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

26) CFSAN001921_21640 in NC_021814


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

27) CFSAN001992_14840 in NC_020307


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  192 bits (713),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnkaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGN+AANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

28) CFSAN002050_01705 in NC_021818


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 158/159 (99%), Positives = 158/159 (99%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYVVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISY VARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

29) cigR in NC_006905


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  191 bits (708),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 155/159 (98%), Positives = 158/159 (99%), Gaps = 0/159 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLanpgngnggghsnnaanqgnngnghkgnagQRTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGH+NNAANQGNNGNGHKGNAGQ+TEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKLLPPGIAKKTVPAS  120
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGK LPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWRIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEW+IVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

30) cigR in NC_015761


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  186 bits (689),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 152/159 (96%), Positives = 156/159 (99%), Gaps = 0/159 (0%)

Query  1    MNNRRSLTVVLATLMTFSLSATPVLAnpgngnggghgnnvanqgnngnghkgnagqkTEH  60
            MNNRR+LT VLATL+TFSLSATPVLANPGNGNGGGHGNN ANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGSKPDHVDSDISYAVARQLAVNLGLTGYPSLPPGIAKNLARGKPLPPGIAKKTVPAS  120
            RKNG+KPDHV+SDISYAVARQLAVNLGLTGY SLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

31) A464_3831 in NC_021870


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  185 bits (686),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 152/159 (96%), Positives = 156/159 (99%), Gaps = 0/159 (0%)

Query  17   MNNRRGLTVVLATLMTFSLSATPVLAnpgngnggghgnnvanqgnngnghkgntgqktEH  76
            MNNRRGLT VLATL+TFSLSATPVLANPGNGNGGGHGNN ANQGNNGNGHKGN+GQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGSKPDHVDSDISYAVARQLAVNLGLTGYPSLPPGIAKNLARGKPLPPGIAKKTVPAS  136
            RKNG+KPDHV+SDISYAVARQLAVNLGLTGY SLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  137  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  175
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

32) SeAg_B3986 in NC_011149


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  184 bits (683),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 151/166 (91%), Positives = 154/166 (93%), Gaps = 7/166 (4%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnnaanqgnngnghkgn  76
            MNNRRGLTAVLATLITFSLSATPVLAN           N++ +GNNAANQGNNGNGHKGN
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLAN-------PGNGNGGGHGNNAANQGNNGNGHKGN  53

Query  77   agqkTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIA  136
            AGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIA
Sbjct  54   AGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIA  113

Query  137  KKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  182
            KKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  114  KKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

33) SARI_03872 in NC_010067


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  182 bits (675),  Expect = 9e-48, Method: Compositional matrix adjust.
 Identities = 149/159 (94%), Positives = 154/159 (97%), Gaps = 0/159 (0%)

Query  13   MSKRRGLTVVLATLVTFFLSATPVLanpgngnggghgnnaanqgnngnghkgnaRQKTER  72
            M++RRGLT VLATL+TF LSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNA QKTE+
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  73   FKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKRVPAS  132
             KNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK VPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  133  MLGQLPYYPGYEWKIIGDNLVLIALSTAVVTAIINGVFD  171
            MLGQLPYYPGYEWKI+GDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

34) I137_18245 in NC_021984


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  173 bits (641),  Expect = 5e-45, Method: Compositional matrix adjust.
 Identities = 145/159 (92%), Positives = 145/159 (92%), Gaps = 14/159 (8%)

Query  1    MNNRRGLTAVLA--------------NPgngnggghgnnaanqgnngnghkgnagqkTEH  46
            MNNRRGLTAVLA              NPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  47   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  106
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  107  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  145
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

35) cigR in NC_022221


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  172 bits (638),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 145/159 (92%), Positives = 145/159 (92%), Gaps = 14/159 (8%)

Query  17   MNNRRGLTAVLA--------------NPgngnggghgnnaanqgnngnghkgnagqkTEH  62
            MNNRRGLTAVLA              NPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  63   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  122
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  123  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  161
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

36) cigR in NC_016831


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  172 bits (638),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 145/159 (92%), Positives = 145/159 (92%), Gaps = 14/159 (8%)

Query  17   MNNRRGLTAVLA--------------NPgngnggghgnnaanqgnngnghkgnagqkTEH  62
            MNNRRGLTAVLA              NPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  63   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  122
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  123  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  161
            MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

37) cigR in NC_011274


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  172 bits (637),  Expect = 9e-45, Method: Compositional matrix adjust.
 Identities = 144/159 (91%), Positives = 144/159 (91%), Gaps = 14/159 (8%)

Query  1    MNNRRGLTAVLA--------------NPgngnggghgnnaanqgnngnghkgnagqkTEH  46
            MNNRRGLTAVLA              NPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  47   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  106
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS  120

Query  107  MLGQLPYYPGYEWKIVGDNLVLIALSTEVVTAIINGVFD  145
            MLGQLPYYPGYEWKIVGDNLVLIALST VVTAIINGVFD
Sbjct  121  MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

38) ROD_41231 in NC_013716


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 117/173 (68%), Positives = 143/173 (83%), Gaps = 14/173 (8%)

Query  1    MGKRRGFTAVLATLVSLSLFAAPVManpgngngngngnggghgnssanhgnkgnqgnngh  60
            M +RRG+TAVLATL+++SL A+PV+ANPGNGNG G+GN +++  +++N  +         
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHK---------  51

Query  61   kgnagEKKNASSDHRKNYGKPDHVEADISFATARHLAVNYGLTGYDSLPPGIAKNLARGK  120
                  +    ++HRKN GKPDHVE+DIS+A AR+LAVN GLTGY+SLPPGIAKNLARGK
Sbjct  52   -----GNAGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGK  106

Query  121  PLPPGIAKKTVPASMLGELPYYPGYEWKMVGNDLVLIALSTAVVTAIINGVFD  173
            PLPPGIAKKTVPASMLG+LPYYPGYEWK+VG++LVLIALSTAVVTAIINGVFD
Sbjct  107  PLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD  159

39) TY21A_19055 in NC_021176


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  1    MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  60
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK  115
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK  115

40) STBHUCCB_39590 in NC_016832


> AF106566|11|G8|4324614|AAD16958.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_14028s|-|12100..12579|cigR|-|CigR
Length=159

 Score =  118 bits (431),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)

Query  17   MNNRRGLTAVLATLITFSLSATPVLANPgngnggghgnnaanqgnngnghkgnagqkTEH  76
            MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH
Sbjct  1    MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH  60

Query  77   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK  131
            RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK
Sbjct  61   RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKK  115