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PAthogenisity Island DataBase (PAI DB)

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Homologs of RL091 gene of AY273869

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PA14_59190
( YP_792915.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-68

100

2) PputW619_3356
( YP_001750209.1 )

hypothetical protein

NC_010501
(Pseudomonas putida W619)

5e-31

• Sequence Alignments

1) PA14_59190 in NC_008463


> AY273869|101|G89|32481702|AAP84216.1|Pseudomonas_aeruginosa_PA14|-|89551..90021|-|RL091|putative 
luminal binding protein
Length=156

 Score =  251 bits (936),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  1    MRKENISAEITERAFDFFYWFSRFEFSLKENGYLKNYKPGARAEPGWENFVQNHSDKYSL  60
            MRKENISAEITERAFDFFYWFSRFEFSLKENGYLKNYKPGARAEPGWENFVQNHSDKYSL
Sbjct  1    MRKENISAEITERAFDFFYWFSRFEFSLKENGYLKNYKPGARAEPGWENFVQNHSDKYSL  60

Query  61   SQSATALIEQSPEQQIVLPGRELGWRPVKLDEDKSDLARVARLLKTVRNNLFHGGKHGGA  120
            SQSATALIEQSPEQQIVLPGRELGWRPVKLDEDKSDLARVARLLKTVRNNLFHGGKHGGA
Sbjct  61   SQSATALIEQSPEQQIVLPGRELGWRPVKLDEDKSDLARVARLLKTVRNNLFHGGKHGGA  120

Query  121  NWDNPARTIHLILLSKAILDEFAALGDFEADYKRIY  156
            NWDNPARTIHLILLSKAILDEFAALGDFEADYKRIY
Sbjct  121  NWDNPARTIHLILLSKAILDEFAALGDFEADYKRIY  156

2) PputW619_3356 in NC_010501


> AY273869|101|G89|32481702|AAP84216.1|Pseudomonas_aeruginosa_PA14|-|89551..90021|-|RL091|putative 
luminal binding protein
Length=156

 Score =  126 bits (463),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 69/130 (54%), Positives = 92/130 (71%), Gaps = 0/130 (0%)

Query  27   CLKENRYLKNKRPGLSAEPGWKCFVVEHAEAYELSMEAEALLASPPDQQIVSDNLELAWQ  86
             LKEN YLKN +PG  AEPGW  FV +H++ Y LS  A AL+  +P+QQIV    EL+W+
Sbjct  27   SLKENGYLKNYKPGARAEPGWENFVQNHSDKYSLSQSATALIEQSPEQQIVLPGRELGWR  86

Query  87   PISFEKCTSDLDKVVKSVKTVRNNLFHGGKHGAAGWDDPVRARLLIEMSTAVLAVLAVLG  146
            P+ ++   SDL +V + +KTVRNNLFHGGKHG+A WD+P R+  LI +S A+L  +A LG
Sbjct  87   PVKLDEDKSDLARVARLLKTVRNNLFHGGKHGGANWDNPARTIHLILLSKAILDEFAALG  146

Query  147  GFTDDYERFY  156
            +F  DY R+Y
Sbjct  147  DFEADYKRIY  156

3) RALTA_B0983 in NC_010530


> AY273869|101|G89|32481702|AAP84216.1|Pseudomonas_aeruginosa_PA14|-|89551..90021|-|RL091|putative 
luminal binding protein
Length=156

 Score = 94.1 bits (338),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 59/134 (45%), Positives = 87/134 (65%), Gaps = 0/134 (0%)

Query  2    VYEFFFAFSRMelalkerrllehekeDAKAKPGWSAFVEMFEADYVQSAEGMALIEARPK  61
             ++FF+ FSR E++LKE   L + K +A+A PGW  FV+     Y  S  + ALIE  P 
Sbjct  14   AFDFFYWFSRFEFSLKENGYLKNYKPGARAEPGWENFVQNHSDKYSLSQSATALIEQSPE  73

Query  62   CQFVGPDQSLVWRELRADPNRSELANTVDALQVVRNNLFHGGKHGEKSWDDPERIDRLLT  121
             Q+V P++ L WR ++ D ++S+LA     L+ VRNNLFHGGKHG  +WD+P R  +L+ 
Sbjct  74   QQIVLPGRELGWRPVKLDEDKSDLARVARLLKTVRNNLFHGGKHGGANWDNPARTIHLIL  133

Query  122  LGKVVLQQLANLHD  135
            L+K +L+++A L D
Sbjct  134  LSKAILDEFAALGD  147