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Homologs of rulA gene of AJ870974

222

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Psyr_1424
( YP_234513.1 )

peptidase S24, S26A and S26B

NC_007005
(Pseudomonas syringae B728a)

2e-64

100

2) Psyr_0735
( YP_233837.1 )

peptidase S24, S26A and S26B

NC_007005
(Pseudomonas syringae B728a)

5e-63

3) L483_21545
( YP_008096079.1 )

ultraviolet light resistance protein RulA

NC_021491
(Pseudomonas putida H8234)

2e-41

4) umuD
( YP_006534823.1 )

prophage repressor

NC_018220
(Pseudomonas putida DOT-T1E)

4e-41

5) rulA
( YP_008076117.1 )

ultraviolet light resistance protein RulA

NC_021361
(Pseudomonas fluorescens A506)

8e-41

6) Pput_2951
( YP_001268263.1 )

putative prophage repressor

NC_009512
(Pseudomonas putida F1)

9e-41

7) umuD
( YP_008113907.1 )

UmuD protein

NC_021505
(Pseudomonas putida NBRC 14164)

3e-40

8) PputW619_2746
( YP_001749607.1 )

peptidase S24/S26 domain-containing protein

NC_010501
(Pseudomonas putida W619)

1e-39

9) umuD
( YP_005208684.1 )

protein UmuD

NC_016830
(Pseudomonas fluorescens F113)

2e-38

10) Pput_5031
( YP_001270335.1 )

putative prophage repressor

NC_009512
(Pseudomonas putida F1)

1e-37

11) Psyr_2762
( YP_235839.1 )

peptidase S24, S26A and S26B

NC_007005
(Pseudomonas syringae B728a)

2e-37

12) rulA
( YP_261774.2 )

ultraviolet light resistance protein RulA

NC_004129
(Pseudomonas protegens Pf-5)

1e-35

13) rulA
( NP_808664.1 )

ultraviolet light resistance protein A

NC_004633
(Pseudomonas syringae DC3000)

1e-33

14) G655_23620
( YP_007711560.1 )

putative prophage repressor

NC_020912
(Pseudomonas aeruginosa B136-33)

7e-33

15) rulA
( YP_272258.1 )

ultraviolet light resistance protein A

NC_007275
(Pseudomonas syringae 1448A)

1e-32

16) rulA
( YP_001173825.1 )

ultraviolet light resistance protein A

NC_009434
(Pseudomonas stutzeri A1501)

3e-32

17) PSPPH_1872
( YP_274103.1 )

ultraviolet light resistance protein RulA

NC_005773
(Pseudomonas syringae 1448A)

1e-29

18) Psyr_1916
( YP_234998.1 )

peptidase S24, S26A and S26B

NC_007005
(Pseudomonas syringae B728a)

1e-29

19) PSPTO_2121
( NP_791943.1 )

RulA protein

NC_004578
(Pseudomonas syringae DC3000)

4e-29

20) rulA
( YP_004715162.1 )

ultraviolet light resistance protein A

NC_015740
(Pseudomonas stutzeri ATCC 17588)

4e-23

21) A458_17870
( YP_006459222.1 )

ultraviolet light resistance protein A

NC_018028
(Pseudomonas stutzeri CCUG 29243)

4e-23

22) PSJM300_10570
( YP_006524536.1 )

ultraviolet light resistance protein A

NC_018177
(Pseudomonas stutzeri DSM 10701)

5e-23

23) Psefu_1475
( YP_004473545.1 )

peptidase S24/S26A/S26B, conserved region

NC_015556
(Pseudomonas fulva 12-X)

8e-22

24) Galf_2402
( YP_003848168.1 )

Peptidase S24/S26A/S26B, conserved region

NC_014394
(Gallionella capsiferriformans ES-2)

1e-21

25) A464_1997
( YP_008322592.1 )

Error-prone repair protein UmuD

NC_021870
(Salmonella bongori N268-08)

2e-21

26) SARI_01639
( YP_001570673.1 )

DNA polymerase V subunit UmuD

NC_010067
(Salmonella enterica RSK2980)

6e-21

27) PSPA7_0100
( YP_001345496.1 )

protein MucA

NC_009656
(Pseudomonas aeruginosa PA7)

8e-21

28) CFSAN002050_16000
( YP_008261105.1 )

umuDC operon protein-like protein

NC_021818
(Salmonella enterica CFSAN002050)

1e-20

29) Entcl_1884
( YP_003941424.1 )

Peptidase S24/S26A/S26B

NC_014618
(Enterobacter cloacae SCF1)

1e-20

30) CFSAN001992_01470
( YP_007470057.1 )

DNA polymerase V subunit UmuD

NC_020307
(Salmonella enterica CFSAN001992)

1e-20

31) MDS_2171
( YP_004379954.1 )

protein MucA

NC_015410
(Pseudomonas mendocina NK-01)

1e-20

32) L483_20240
( YP_008095824.1 )

umuDC operon protein-like protein

NC_021491
(Pseudomonas putida H8234)

2e-20

33) SBOV20591
( YP_008505902.1 )

protein UmuD

NC_022241
(Salmonella enterica 3114)

2e-20

34) SEEH1578_19260
( YP_008247905.1 )

DNA polymerase V subunit UmuD

NC_021810
(Salmonella enterica 41578)

2e-20

35) SSPA0812
( YP_002141654.1 )

DNA polymerase V subunit UmuD

NC_011147
(Salmonella enterica AKU12601)

2e-20

36) umuD
( YP_150166.1 )

UmuD protein

NC_006511
(Salmonella enterica ATCC 9150)

2e-20

37) SEEB0189_09490
( YP_008308223.1 )

umuDC operon protein-like protein

NC_021844
(Salmonella enterica CFSAN000189)

2e-20

38) CFSAN002050_16800
( YP_008261261.1 )

umuDC operon protein-like protein

NC_021818
(Salmonella enterica CFSAN002050)

2e-20

39) CFSAN002069_21850
( YP_008253103.1 )

umuDC operon protein-like protein

NC_021812
(Salmonella enterica CFSAN002069)

2e-20

40) STY2206
( NP_456557.1 )

UmuD protein

NC_003198
(Salmonella enterica CT18)

2e-20

41) SeSA_A2159
( YP_002115033.1 )

DNA polymerase V subunit UmuD

NC_011094
(Salmonella enterica CVM19633)

2e-20

42) umuD
( YP_002637303.1 )

DNA polymerase V subunit UmuD

NC_012125
(Salmonella enterica RKS4594)

2e-20

43) umuD
( YP_216988.1 )

DNA polymerase V subunit UmuD

NC_006905
(Salmonella enterica SC-B67)

2e-20

44) SPAB_01144
( YP_001587393.1 )

DNA polymerase V subunit UmuD

NC_010102
(Salmonella enterica SGSC4150; SPB7)

2e-20

45) SNSL254_A2163
( YP_002041263.1 )

DNA polymerase V subunit UmuD

NC_011080
(Salmonella enterica SL254)

2e-20

46) SeHA_C2216
( YP_002046049.1 )

DNA polymerase V subunit UmuD

NC_011083
(Salmonella enterica SL476)

2e-20

47) umuD
( NP_804710.1 )

DNA polymerase V subunit UmuD

NC_004631
(Salmonella enterica Ty2)

2e-20

48) TY21A_04510
( YP_007925224.1 )

DNA polymerase V subunit UmuD

NC_021176
(Salmonella enterica Ty21a)

2e-20

49) Rahaq2_4854
( YP_005220580.1 )

SOS response transcriptional repressor, RecA-mediated autopeptidase

NC_016835
(Rahnella aquatilis CIP 78.65)

3e-20

50) SE451236_15920
( YP_008266200.1 )

umuDC operon protein-like protein

NC_021820
(Salmonella enterica 08-1736)

3e-20

51) umuD
( YP_005237971.1 )

DNA polymerase V subunit UmuD

NC_016856
(Salmonella enterica 14028S)

3e-20

52) CFSAN001921_07080
( YP_008254799.1 )

umuDC operon protein-like protein

NC_021814
(Salmonella enterica CFSAN001921)

3e-20

53) STMMW_19781
( YP_005233017.1 )

DNA repair protein

NC_016854
(Salmonella enterica D23580)

3e-20

54) umuD
( NP_460949.1 )

DNA polymerase V subunit UmuD

NC_003197
(Salmonella enterica LT2)

3e-20

55) umuD
( YP_005181820.1 )

DNA repair protein

NC_016810
(Salmonella enterica SL1344)

3e-20

56) umuD
( YP_005242906.1 )

DNA polymerase V subunit UmuD

NC_016857
(Salmonella enterica ST4/74)

3e-20

57) STMDT12_C20190
( YP_005247715.1 )

DNA polymerase V subunit UmuD

NC_016860
(Salmonella enterica T000240)

3e-20

58) STU288_06380
( YP_007902375.1 )

DNA polymerase V subunit UmuD

NC_021151
(Salmonella enterica U288)

3e-20

59) umuD
( YP_005252503.1 )

DNA polymerase V subunit UmuD

NC_016863
(Salmonella enterica UK-1)

3e-20

60) Rvan_2447
( YP_004012764.1 )

peptidase S24/S26A/S26B, conserved region

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

3e-20

61) RORB6_08030
( YP_007873847.1 )

DNA polymerase V subunit UmuD

NC_021066
(Raoultella ornithinolytica B6)

1e-19

62) NH8B_1668
( YP_004846899.1 )

peptidase S24 and S26 domain containing protein

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-19

63) NH8B_2099
( YP_004847328.1 )

peptidase S24 and S26 domain containing protein

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-19

64) Msip34_1165
( YP_003050939.1 )

peptidase S24 and S26 domain-containing protein

NC_012969
(Methylovorus glucosetrophus SIP3-4)

1e-19

65) MPQ_1224
( YP_004039624.1 )

peptidase s24 and s26 domain-containing protein

NC_014733
(Methylovorus sp. MP688)

1e-19

66) umuD
( YP_004952277.1 )

UmuD

NC_016514
(Enterobacter cloacae EcWSU1)

2e-19

67) Selin_1933
( YP_004113216.1 )

peptidase S24/S26A/S26B

NC_014836
(Desulfurispirillum indicum S5)

4e-19

68) Ent638_2213
( YP_001176939.1 )

DNA polymerase V subunit UmuD

NC_009436
(Enterobacter sp. 638)

5e-19

69) umuD
( YP_127002.1 )

hypothetical protein

NC_006369
(Legionella pneumophila Lens)

5e-19

70) umuD
( YP_123987.1 )

hypothetical protein

NC_006368
(Legionella pneumophila Paris)

5e-19

71) EAE_21895
( YP_004594559.1 )

DNA polymerase V subunit UmuD

NC_015663
(Enterobacter aerogenes KCTC 2190)

6e-19

72) umuD
( YP_004952171.1 )

UmuD

NC_016514
(Enterobacter cloacae EcWSU1)

7e-19

73) Dbac_0176
( YP_003156719.1 )

peptidase S24 and S26 domain-containing protein

NC_013173
(Desulfomicrobium baculatum DSM 4028)

8e-19

74) Msip34_1483
( YP_003051255.1 )

peptidase S24 and S26 domain-containing protein

NC_012969
(Methylovorus glucosetrophus SIP3-4)

8e-19

75) ECENHK_11805
( YP_006578846.1 )

DNA polymerase V subunit UmuD

NC_018405
(Enterobacter cloacae ENHKU01)

2e-18

76) Mrad2831_6256
( YP_001766982.1 )

peptidase S24/S26 domain-containing protein

NC_010510
(Methylobacterium radiotolerans JCM 2831)

2e-18

77) Kkor_1106
( YP_003146293.1 )

peptidase S24 and S26 domain-containing protein

NC_013166
(Kangiella koreensis DSM 16069)

3e-18

78) Sputw3181_1083
( YP_962487.1 )

putative prophage repressor

NC_008750
(Shewanella sp. W3-18-1)

3e-18

79) Mmc1_2081
( YP_865988.1 )

SOS-response transcriptional repressor, LexA

NC_008576
(Magnetococcus marinus MC-1)

3e-18

80) CKO_01842
( YP_001453405.1 )

DNA polymerase V subunit UmuD

NC_009792
(Citrobacter koseri ATCC BAA-895)

3e-18

81) A3UG_12450
( YP_006477920.1 )

DNA polymerase V subunit UmuD

NC_018079
(Enterobacter cloacae SDM)

5e-18

82) H650_03735
( YP_008106596.1 )

umuDC operon protein-like protein

NC_021500
(Enterobacter sp. R4-368)

7e-18

83) Metme_1988
( YP_004512898.1 )

peptidase S24/S26A/S26B

NC_015572
(Methylomonas methanica MC09)

7e-18

84) Q7C_554
( YP_006292414.1 )

Error-prone repair protein UmuD

NC_017856
(Methylophaga sp. JAM7)

9e-18

85) Entas_1887
( YP_004828411.1 )

peptidase S24/S26A/S26B, conserved region

NC_015968
(Enterobacter asburiae LF7a)

1e-17

86) umuD
( YP_002152202.1 )

DNA repair protein

NC_010554
(Proteus mirabilis HI4320)

1e-17

87) Acife_0725
( YP_004783249.1 )

peptidase S24/S26A/S26B

NC_015942
(Acidithiobacillus ferrivorans SS3)

9e-18

88) umuD
( YP_004916363.1 )

DNA polymerase V subunit D

NC_016112
(Methylomicrobium alcaliphilum 20Z)

2e-17

89) Entcl_2117
( YP_003941655.1 )

Peptidase S24/S26A/S26B

NC_014618
(Enterobacter cloacae SCF1)

2e-17

90) KPK_2837
( YP_002238664.1 )

DNA polymerase V subunit UmuD

NC_011283
(Klebsiella pneumoniae 342)

2e-17

91) amad1_05805
( YP_006976034.1 )

prophage repressor

NC_019393
(Alteromonas macleodii AltDE1)

2e-17

92) I636_05820
( YP_008183144.1 )

prophage repressor

NC_021714
(Alteromonas macleodii Ionian Sea UM4b)

2e-17

93) I635_05785
( YP_008179090.1 )

prophage repressor

NC_021713
(Alteromonas macleodii Ionian Sea UM7)

2e-17

94) HIMB59_00010580
( YP_006758421.1 )

Peptidase S24

NC_018644
(alpha proteobacterium HIMB59 HIMB59)

2e-17

95) umuD
( YP_001335100.1 )

DNA polymerase V subunit UmuD

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

3e-17

96) umuD
( YP_004651091.1 )

protein umuD

NC_015702
(Parachlamydia acanthamoebae UV-7)

3e-17

97) umuD
( YP_002383051.1 )

DNA polymerase V subunit UmuD

NC_011740
(Escherichia fergusonii ATCC 35469)

4e-17

98) Bind_3751
( YP_001831045.1 )

peptidase S24/S26 domain-containing protein

NC_010580
(Beijerinckia indica ATCC 9039)

6e-17

99) D782_2257
( YP_007340422.1 )

SOS response transcriptional repressor, RecA-mediated autopeptidase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

6e-17

100) A79E_3005
( YP_006636800.1 )

Error-prone repair protein UmuD

NC_018522
(Klebsiella pneumoniae 1084)

6e-17

101) KPHS_20650
( YP_005226365.1 )

DNA polymerase V subunit UmuD

NC_016845
(Klebsiella pneumoniae HS11286)

6e-17

102) N559_3110
( YP_008426052.1 )

DNA polymerase V subunit UmuD

NC_022082
(Klebsiella pneumoniae JM45)

6e-17

103) KPN2242_09025
( YP_005954284.1 )

DNA polymerase V subunit UmuD

NC_017540
(Klebsiella pneumoniae KCTC 2242)

6e-17

104) umuD
( YP_002918970.1 )

DNA polymerase V subunit UmuD

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

6e-17

105) KPN_01183
( YP_001334846.1 )

DNA polymerase V subunit UmuD

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

6e-17

106) umuD
( YP_002238953.1 )

DNA polymerase V subunit UmuD

NC_011283
(Klebsiella pneumoniae 342)

8e-17

107) MU9_1875
( YP_007505294.1 )

Error-prone repair protein UmuD

NC_020418
(Morganella morganii KT)

8e-17

108) umuD
( YP_004916360.1 )

DNA polymerase V subunit D

NC_016112
(Methylomicrobium alcaliphilum 20Z)

1e-16

109) Neut_2624
( YP_743804.1 )

putative prophage repressor

NC_008342
(Nitrosomonas eutropha C91)

8e-17

110) ECENHK_09850
( YP_006578467.1 )

protein umuD

NC_018405
(Enterobacter cloacae ENHKU01)

1e-16

111) LLO_1987
( YP_003455456.1 )

UmuD protein

NC_013861
(Legionella longbeachae NSW150)

2e-16

112) umuD
( YP_005802396.1 )

Error-prone repair, SOS-response transcriptional repressor

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-16

113) umuD
( YP_002648538.1 )

Protein UmuD

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-16

114) umuD
( YP_005819742.1 )

Protein UmuD

NC_017445
(Erwinia sp. Ejp617)

2e-16

115) KPK_3299
( YP_002239124.1 )

protein UmuD-like protein

NC_011283
(Klebsiella pneumoniae 342)

3e-16

116) Kvar_3165
( YP_003440082.1 )

peptidase S24/S26A/S26B, conserved region

NC_013850
(Klebsiella variicola At-22)

3e-16

117) Slit_0831
( YP_003523457.1 )

peptidase S24/S26A/S26B, conserved region

NC_013959
(Sideroxydans lithotrophicus ES-1)

5e-16

118) amb2067
( YP_421430.1 )

SOS-response transcriptional repressors

NC_007626
(Magnetospirillum magneticum AMB-1)

7e-16

119) Celly_1043
( YP_004261743.1 )

peptidase S24/S26A/S26B

NC_015167
(Cellulophaga lytica DSM 7489)

1e-15

120) umuD
( YP_001484155.1 )

putative SOS mutagenesis protein UmuD

NC_009840
(Prochlorococcus marinus MIT 9215)

1e-15

121) rumA
( YP_007550705.1 )

DNA repair protein

NC_020516
(Azoarcus sp. KH32C)

2e-15

122) umuD
( YP_001009315.1 )

SOS mutagenesis protein UmuD

NC_008816
(Prochlorococcus marinus AS9601)

3e-15

123) PMT9312_0863
( YP_397359.1 )

SOS mutagenesis protein UmuD

NC_007577
(Prochlorococcus marinus MIT 9312)

3e-15

124) sll5123
( NP_942279.1 )

hypothetical protein

NC_005229
(Synechocystis sp. PCC 6803)

3e-15

125) MYO_21240
( YP_007459869.1 )

hypothetical protein

NC_020296
(Synechocystis sp. PCC 6803)

3e-15

126) umuD
( YP_001011333.1 )

SOS mutagenesis protein UmuD

NC_008817
(Prochlorococcus marinus MIT 9515)

4e-15

127) DND132_2624
( YP_005168630.1 )

Peptidase S24/S26A/S26B

NC_016803
(Desulfovibrio desulfuricans ND132)

4e-15

128) PMM0936
( NP_893054.1 )

SOS mutagenesis protein UmuD

NC_005072
(Prochlorococcus marinus CCMP1986)

6e-15

129) rumA
( YP_195669.1 )

DNA repair protein

NC_006824
(Aromatoleum aromaticum EbN1)

6e-15

130) umuD
( YP_001091146.1 )

SOS mutagenesis protein UmuD

NC_009091
(Prochlorococcus marinus MIT 9301)

8e-15

131) umuD
( YP_007595733.1 )

DNA polymerase V, subunit D

NC_020547
(Acinetobacter baumannii D1279779)

1e-14

132) umuD
( YP_003612746.1 )

DNA polymerase V UmuD

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-14

133) A464_1669
( YP_008322264.1 )

Error-prone repair protein UmuD

NC_021870
(Salmonella bongori N268-08)

1e-14

134) umuD
( YP_004730328.1 )

DNA repair protein

NC_015761
(Salmonella bongori NCTC 12419)

1e-14

135) umuD
( YP_001017609.1 )

SOS mutagenesis protein UmuD

NC_008820
(Prochlorococcus marinus MIT 9303)

2e-14

136) Rhom172_2841
( YP_004831010.1 )

peptidase S24/S26A/S26B

NC_015970
(Rhodothermus marinus SG0.5JP17-172)

2e-14

137) Maqu_4001
( YP_957190.1 )

putative prophage repressor

NC_008739
(Marinobacter aquaeolei VT8)

3e-14

138) BBIF_0763
( YP_003938542.1 )

peptidase S24-like domain

NC_014616
(Bifidobacterium bifidum S17)

3e-14

139) BBPR_0732
( YP_003970857.1 )

UmuD protein

NC_014638
(Bifidobacterium bifidum PRL2010)

4e-14

140) PMT0635
( NP_894468.1 )

SOS mutagenesis protein UmuD

NC_005071
(Prochlorococcus marinus MIT 9313)

4e-14

141) impA
( YP_006394201.1 )

protein ImpA

NC_017999
(Bifidobacterium bifidum BGN4)

7e-14

142) Msip34_1606
( YP_003051378.1 )

peptidase S24 and S26 domain-containing protein

NC_012969
(Methylovorus glucosetrophus SIP3-4)

1e-13

143) SAR116_1469
( YP_003551796.1 )

DNA polymerase V

NC_014010
(Candidatus Puniceispirillum marinum IMCC1322)

2e-13

144) H650_06735
( YP_008107185.1 )

umuDC operon protein-like protein

NC_021500
(Enterobacter sp. R4-368)

2e-12

145) Sbal175_1831
( YP_006020408.1 )

Peptidase S24/S26A/S26B

NC_017571
(Shewanella baltica BA175)

7e-11

146) Shew185_4269
( YP_001368447.1 )

putative prophage repressor

NC_009665
(Shewanella baltica OS185)

9e-11

147) Sbal195_4408
( YP_001556825.1 )

peptidase S24/S26 domain-containing protein

NC_009997
(Shewanella baltica OS195)

9e-11

148) Sbal678_4437
( YP_005275613.1 )

peptidase S24/S26A/S26B

NC_016901
(Shewanella baltica OS678)

9e-11

149) Sbal117_3695
( YP_006038860.1 )

Peptidase S24/S26A/S26B

NC_017579
(Shewanella baltica OS117)

5e-10

150) Sbal_3554
( YP_001051899.1 )

putative prophage repressor

NC_009052
(Shewanella baltica OS155)

5e-10

151) Shal_2184
( YP_001674402.1 )

peptidase S24/S26 domain-containing protein

NC_010334
(Shewanella halifaxensis HAW-EB4)

2e-09

152) umuD
( YP_006105539.1 )

protein UmuD

NC_017631
(Escherichia coli ABU 83972)

3e-09

153) umuD
( YP_852310.1 )

DNA polymerase V subunit UmuD

NC_008563
(Escherichia coli APEC O1)

3e-09

154) umuD
( NP_753536.1 )

DNA polymerase V subunit UmuD

NC_004431
(Escherichia coli CFT073)

3e-09

155) umuD
( YP_006153583.1 )

DNA polymerase V subunit UmuD

NC_017652
(Escherichia coli clone D i14)

3e-09

156) umuD
( YP_006148664.1 )

DNA polymerase V subunit UmuD

NC_017651
(Escherichia coli clone D i2)

3e-09

157) umuD
( YP_006100531.1 )

protein UmuD

NC_017628
(Escherichia coli IHE3034)

3e-09

158) umuD
( YP_002556112.1 )

Protein umuD

NC_011993
(Escherichia coli LF82)

3e-09

159) NRG857_06040
( YP_006119570.1 )

DNA polymerase V subunit UmuD

NC_017634
(Escherichia coli NRG 857C)

3e-09

160) umuD
( YP_008571185.1 )

hypothetical protein

NC_022370
(Escherichia coli PMV-1)

3e-09

161) umuD
( YP_002391020.1 )

DNA polymerase V subunit UmuD

NC_011742
(Escherichia coli S88)

3e-09

162) UM146_11170
( YP_006111115.1 )

DNA polymerase V subunit UmuD

NC_017632
(Escherichia coli UM146)

3e-09

163) umuD
( YP_540382.1 )

DNA polymerase V subunit UmuD

NC_007946
(Escherichia coli UTI89)

3e-09

164) umuD
( YP_003233991.1 )

DNA polymerase V subunit D

NC_013364
(Escherichia coli 11128)

4e-09

165) umuD
( YP_002328842.1 )

DNA polymerase V subunit UmuD

NC_011601
(Escherichia coli E2348/69)

4e-09

166) umuD
( YP_006143449.1 )

DNA polymerase V, subunit D

NC_017646
(Escherichia coli CE10)

4e-09

167) umuD
( YP_002407865.1 )

DNA polymerase V subunit UmuD

NC_011750
(Escherichia coli IAI39)

4e-09

168) umuD
( YP_001744018.1 )

DNA polymerase V subunit UmuD

NC_010498
(Escherichia coli SMS-3-5)

4e-09

169) umuD
( YP_006095543.1 )

SOS mutagenesis and repair protein

NC_017626
(Escherichia coli 042)

5e-09

170) umuD
( YP_003228735.1 )

DNA polymerase V subunit UmuD

NC_013361
(Escherichia coli 11368)

5e-09

171) umuD
( YP_003221253.1 )

DNA polymerase V subunit D

NC_013353
(Escherichia coli 12009)

5e-09

172) O3M_14720
( YP_006770579.1 )

DNA polymerase V subunit UmuD

NC_018650
(Escherichia coli 2009EL-2050)

5e-09

173) O3O_10875
( YP_006784706.1 )

DNA polymerase V subunit UmuD

NC_018661
(Escherichia coli 2009EL-2071)

5e-09

174) O3K_14745
( YP_006779630.1 )

DNA polymerase V subunit UmuD

NC_018658
(Escherichia coli 2011C-3493)

5e-09

175) ECP_1226
( YP_669138.1 )

DNA polymerase V subunit UmuD

NC_008253
(Escherichia coli 536)

5e-09

176) umuD
( YP_002402364.1 )

DNA polymerase V subunit UmuD

NC_011748
(Escherichia coli 55989)

5e-09

177) APECO78_09780
( YP_007381131.1 )

DNA polymerase V subunit UmuD

NC_020163
(Escherichia coli APEC O78)

5e-09

178) EcolC_2442
( YP_001725403.1 )

DNA polymerase V subunit UmuD

NC_010468
(Escherichia coli ATCC 8739)

5e-09

179) umuD
( YP_002998994.1 )

SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC, subunit of DNA polymerase V

NC_012892
(Escherichia coli BL21(DE3))

5e-09

180) umuD
( YP_003053821.1 )

DNA polymerase V, subunit D

NC_012971
(Escherichia coli BL21(DE3))

5e-09

181) umuD
( YP_003499016.1 )

DNA polymerase V subunit UmuD

NC_013941
(Escherichia coli CB9615)

5e-09

182) EcDH1_2465
( YP_006092394.1 )

peptidase S24 and S26 domain-containing protein

NC_017625
(Escherichia coli DH1)

5e-09

183) umuD
( YP_006128523.1 )

DNA polymerase V subunit UmuD

NC_017638
(Escherichia coli DH1)

5e-09

184) umuD
( YP_001462433.1 )

DNA polymerase V subunit UmuD

NC_009801
(Escherichia coli E24377A)

5e-09

185) umuD
( YP_002270123.1 )

DNA polymerase V subunit UmuD

NC_011353
(Escherichia coli EC4115)

5e-09

186) umuD
( NP_287422.1 )

DNA polymerase V subunit UmuD

NC_002655
(Escherichia coli EDL933)

5e-09

187) ECBD_2439
( YP_003036650.1 )

DNA polymerase V subunit UmuD

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

5e-09

188) ETEC_1287
( YP_006114863.1 )

SOS mutagenesis and repair protein

NC_017633
(Escherichia coli ETEC H10407)

5e-09

189) umuD
( YP_001458004.1 )

DNA polymerase V subunit UmuD

NC_009800
(Escherichia coli HS)

5e-09

190) umuD
( YP_002386651.1 )

DNA polymerase V subunit UmuD

NC_011741
(Escherichia coli IAI1)

5e-09

191) umuD
( YP_001730131.1 )

DNA polymerase V subunit UmuD

NC_010473
(Escherichia coli K-12)

5e-09

192) umuD
( YP_002926210.1 )

DNA polymerase V subunit UmuD

NC_012759
(Escherichia coli K-12)

5e-09

193) umuD
( YP_007556641.1 )

DNA polymerase V, subunit D

NC_020518
(Escherichia coli K-12)

5e-09

194) umuD
( YP_489450.1 )

DNA polymerase V, subunit D

NC_007779
(Escherichia coli K-12)

5e-09

195) umuD
( NP_415701.1 )

DNA polymerase V, subunit D

NC_000913
(Escherichia coli K12)

5e-09

196) EKO11_2673
( YP_005278336.1 )

peptidase S24/S26A/S26B

NC_016902
(Escherichia coli KO11FL)

5e-09

197) umuD
( YP_006165703.1 )

DNA polymerase V subunit UmuD

NC_017660
(Escherichia coli KO11FL)

5e-09

198) LY180_06010
( YP_008564317.1 )

DNA polymerase V subunit UmuD

NC_022364
(Escherichia coli LY180)

5e-09

199) umuD
( YP_006168970.1 )

Protein umuD

NC_017663
(Escherichia coli P12b)

5e-09

200) umuD
( YP_003044373.1 )

DNA polymerase V subunit UmuD

NC_012967
(Escherichia coli REL606)

5e-09

201) ECO55CA74_07035
( YP_006158561.1 )

DNA polymerase V subunit UmuD

NC_017656
(Escherichia coli RM12579)

5e-09

202) ECs1678
( NP_309705.1 )

DNA polymerase V subunit UmuD

NC_002695
(Escherichia coli Sakai)

5e-09

203) ECSE_1231
( YP_002292506.1 )

DNA polymerase V subunit UmuD

NC_011415
(Escherichia coli SE11)

5e-09

204) umuD
( YP_003077497.1 )

DNA polymerase V subunit UmuD

NC_013008
(Escherichia coli TW14359)

5e-09

205) umuD
( YP_002412217.1 )

DNA polymerase V subunit UmuD

NC_011751
(Escherichia coli UMN026)

5e-09

206) UMNK88_1496
( YP_006133259.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

5e-09

207) umuD
( YP_006124002.1 )

DNA polymerase V, subunit D

NC_017635
(Escherichia coli W)

5e-09

208) umuD
( YP_006172692.1 )

DNA polymerase V subunit UmuD

NC_017664
(Escherichia coli W)

5e-09

209) CDCO157_1608
( YP_006312474.1 )

DNA polymerase V subunit UmuD

NC_017906
(Escherichia coli Xuzhou21)

5e-09

210) umuD
( YP_001879965.1 )

DNA polymerase V subunit UmuD

NC_010658
(Shigella boydii CDC 3083-94)

5e-09

211) umuD
( YP_408311.1 )

DNA polymerase V subunit UmuD

NC_007613
(Shigella boydii Sb227)

5e-09

212) umuD
( YP_005726873.1 )

DNA polymerase V subunit

NC_017328
(Shigella flexneri 2002017)

5e-09

213) umuD
( NP_836871.1 )

DNA polymerase V subunit UmuD

NC_004741
(Shigella flexneri 2457T)

5e-09

214) umuD
( NP_707080.1 )

DNA polymerase V subunit UmuD

NC_004337
(Shigella flexneri 301)

5e-09

215) umuD
( YP_688702.1 )

DNA polymerase V subunit UmuD

NC_008258
(Shigella flexneri 8401)

5e-09

216) SSON53_06290
( YP_005455816.1 )

DNA polymerase V subunit UmuD

NC_016822
(Shigella sonnei 53G)

5e-09

217) umuD
( YP_310132.1 )

DNA polymerase V subunit UmuD

NC_007384
(Shigella sonnei Ss046)

5e-09

218) ambt_16835
( YP_004468674.1 )

putative prophage repressor

NC_015554
(Alteromonas sp. SN2)

5e-09

219) umuD
( YP_002397338.1 )

DNA polymerase V subunit UmuD

NC_011745
(Escherichia coli ED1a)

6e-09

220) umuD
( YP_006138420.1 )

DNA polymerase V subunit

NC_017644
(Escherichia coli NA114)

6e-09

221) ECSF_1128
( YP_003349118.1 )

mutagenesis and repair protein UmuD

NC_013654
(Escherichia coli SE15)

6e-09

222) umuD
( YP_402863.1 )

DNA polymerase V subunit UmuD

NC_007606
(Shigella dysenteriae Sd197)

7e-09

• Sequence Alignments

1) Psyr_1424 in NC_007005


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  238 bits (887),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)

Query  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60
            MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120
            SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  121  HILEGDNLVIWGVVNYSMRRHGKA  144
            HILEGDNLVIWGVVNYSMRRHGKA
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGKA  144

2) Psyr_0735 in NC_007005


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 139/144 (97%), Positives = 142/144 (99%), Gaps = 0/144 (0%)

Query  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60
            MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAVLNNSEPICKRLFMMDGGVKLQSEDSAYPSK  120
            SMIGAGIFDKDLIVVDRSRTAEHGEIVVA LNNSEPICKRLFMMDG VKLQSE+SAYPSK
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  121  HILEGDNLVIWGVVSYSLRRHGKA  144
            HILEGDNLVIWGVV+YS+RRHGKA
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGKA  144

3) L483_21545 in NC_021491


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  161 bits (595),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 86/143 (61%), Positives = 119/143 (84%), Gaps = 1/143 (0%)

Query  1    MTITLLGAPAGGTEPLPLYSFHVPAGFPSPAADHLEGHISLDELFDLRAPHVYLVKVEGD  60
            M++ +LG+ + G   LPLYSF+VPAGF+SPA D +E H+SLDEL ++RAPHVYL K+ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIYSGDIVIVDRGREAGHGDVVIAAV-NSEPVCKRLYRRDGVVILKSENPAYPPR  119
            SM GAGI+  D+++VDR+R A HG++V+AA+ NSEP+CKRL+  DGVV L+SEN+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YVMEGDELVIWGVVRYSVRDHAQ  142
             ++EGD+LVIWGVV YS+R H++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

4) umuD in NC_018220


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  160 bits (591),  Expect = 4e-41, Method: Compositional matrix adjust.
 Identities = 88/143 (62%), Positives = 118/143 (83%), Gaps = 1/143 (0%)

Query  1    MTITFLGVPTGGTEPLPLYSFHVPAGFPSPAADHLESHISLDELFDLRAPHVYLVKVEGD  60
            M++ +LG  + G   LPLYSF+VPAGF+SPA D +E H+SLDEL ++RAPHVYL K+ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIYSGDIVIVDRGREAEHGDIVIAAV-NSEPVCKRLHRRDGVVILKSENTAYPPR  119
            SM GAGI+  D+++VDR+R AEHG+IV+AA+ NSEP+CKRL   DGVV L+SEN+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YIMEGDDLVVWGVVRYSVRDHAQ  142
             I+EGD+LV+WGVV YS+R H++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

5) rulA in NC_021361


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  159 bits (587),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 91/143 (64%), Positives = 120/143 (84%), Gaps = 1/143 (0%)

Query  1    MSVTLLGPIASGGESLPLFSCQVSAGFPSPAADHLEKLISLDELFEIRAPHVYLAKILGD  60
            MSV +LGP++ GG  LPL+S QV+AGF+SPA D +EK +SLDEL E+RAPHVYLAKILGD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIFSGDLVIVDRSKTARHGDIVIAAL-NTESVCKRLSIQGDQVVLMAENPKYPPR  119
            SM GAGIF  DL++VDRS+TA HG+IV+AAL N+E++CKRL + ++ V L +EN+ YP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YVMEGDELVIWGVVNYSVRDHER  142
             ++EGD+LVIWGVVNYS+R H +
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

6) Pput_2951 in NC_009512


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  159 bits (587),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 88/143 (62%), Positives = 118/143 (83%), Gaps = 1/143 (0%)

Query  17   MTITFLGVPTGGTEPLPLYSFHVPAGFPSPAADHLESHISLDELFDLRAPHVYLVKVEGD  76
            M++ +LG  + G   LPLYSF+VPAGF+SPA D +E H+SLDEL ++RAPHVYL K+ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  77   SMQGAGIYSGDIVIVDRGREAEHGDIVIAAV-NSEPVCKRLHRRDGVVILKSENTAYPPR  135
            SM GAGI+  D+++VDR+R AEHG+IV+AA+ NSEP+CKRL   DGVV L+SEN+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  136  YIMEGDDLVVWGVVRYSVRDHAQ  158
             I+EGD+LV+WGVV YS+R H++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

7) umuD in NC_021505


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 88/143 (62%), Positives = 118/143 (83%), Gaps = 1/143 (0%)

Query  1    MTIKFLGTPTGGTELLPLYSFHVPAGFPSPAADHLEGHISLDELFDLRAPHVYLVKVEGD  60
            M++ +LG  + G   LPLYSF+VPAGF+SPA D +E H+SLDEL ++RAPHVYL K+ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIYSGDIVIVDRGREAEHGDIVIAAV-NSEPVCKRLHRRDGVVILKSENPAYPAR  119
            SM GAGI+  D+++VDR+R AEHG+IV+AA+ NSEP+CKRL   DGVV L+SEN+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YIMEGDELVVWGVVRYSVRDHAQ  142
             I+EGD+LV+WGVV YS+R H++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

8) PputW619_2746 in NC_010501


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  155 bits (573),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 86/143 (61%), Positives = 117/143 (82%), Gaps = 1/143 (0%)

Query  11   MTITFLGMPTGGTEPLPLYSFHVPAGFPSPAADHLEGHISLDEIFDLRAPHVYLVKVEGD  70
            M++ +LG  + G   LPLYSF+VPAGF+SPA D +E H+SLDE+ ++RAPHVYL K+ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  71   SMQGAGIYSGDIVIVDRGREAEHGDIVIAAV-NCEPVCKRLHRRDAVVILKSENPAYPPR  129
            SM GAGI+  D+++VDR+R AEHG+IV+AA+ N EP+CKRL   D+VV L+SEN+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  130  YIMEGDELVIWGVVRYSVRDHAQ  152
             I+EGD+LVIWGVV YS+R H++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

9) umuD in NC_016830


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  151 bits (557),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 88/141 (63%), Positives = 112/141 (80%), Gaps = 1/141 (0%)

Query  1    MSFSILGPIAEGGLKLPLCSFRVPAGFPSPAADHIEAHISLDEVLNIRAPHVYLVSIAGE  60
            MS  ILGP++EGG+KLPL SF+VPAGF+SPA D IE H+SLDE+ ++RAPHVYL  I G+
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIFEGDLAVVDRALEPAHGHIVVALLNN-EPVCKRLCIRGREVILLSENPKYPPR  119
            SM GAGIF+ DL VVDR+  + HG+IVVA LNN EP+CKRL + +  V L SEN+ YP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YVLEGDELVIWGVITCSVRSH  140
             +LEGD+LVIWGV+  S+R H
Sbjct  121  HILEGDNLVIWGVVNYSMRRH  141

10) Pput_5031 in NC_009512


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 82/141 (59%), Positives = 113/141 (81%), Gaps = 1/141 (0%)

Query  2    ITVLGTLDPSTTDLPLYSFQVPAGFPSPAADHLEKRISLDELLDVRAPHIYLVRVEGDSM  61
            + +LG L  +   LPLYSFQVPAGF+SPA D +EK++SLDEL +VRAPH+YL ++ GDSM
Sbjct  3    VVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSM  62

Query  62   IGAGIYPGDLVLVDRSISPEPGHIVIAAV-NCEPLCKRLAREGSQVVLRSENPRYSSRYL  120
            IGAGI+  DL++VDRS ++E G+IV+AA+ N EP+CKRL   ++ V L+SEN+ Y+S+ +
Sbjct  63   IGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHI  122

Query  121  LEGEELEIWGVVTYSVRSHAK  141
            LEG++L IWGVV YS+R H+K
Sbjct  123  LEGDNLVIWGVVNYSMRRHGK  143

11) Psyr_2762 in NC_007005


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  148 bits (544),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 88/144 (62%), Positives = 114/144 (80%), Gaps = 1/144 (0%)

Query  1    MNVTYLGTLAEEGAKLPWFSSLVSAGFPSPAADHIEKHISLDELFSIRAPHVYLVTVLGE  60
            M+V  LG L+E G KLP +S  V+AGF+SPA D IEKH+SLDEL  +RAPHVYL  +LG+
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIHSGDLAIVDRSLEAEHGDIVVAAL-NAEAVCKRLHMRNDVVILQSENPHFAPR  119
            SM GAGI   DL +VDRS  AEHG+IVVAAL N+E++CKRL M ++VV LQSEN+ ++++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  HIMEGDELSILGVVRYSVRDHGRS  143
            HI+EGD+L I GVV YS+R HG++
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGKA  144

12) rulA in NC_004129


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 83/141 (59%), Positives = 110/141 (79%), Gaps = 1/141 (0%)

Query  1    MSFSILGPIAEGGRKLPLCLFRVPAGFPSPAADHIEQQISLDQVLNIRAPHVYLVSISGE  60
            MS  ILGP++EGG KLPL  F+VPAGF+SPA D IE+++SLD++ ++RAPHVYL  I G+
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMQGAGIFDGDLAIVDRSIEAMHGHIVIALLNN-DPVCKRVCLRGKDIVLLSENPKYPPR  119
            SM GAGIFD DL +VDRS  A HG+IV+A LNN +P+CKR+ + +  + L SEN+ YP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YVLEGDELTIWGVVTSSVRSH  140
             +LEGD+L IWGVV  S+R H
Sbjct  121  HILEGDNLVIWGVVNYSMRRH  141

13) rulA in NC_004633


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 77/138 (56%), Positives = 110/138 (80%), Gaps = 1/138 (0%)

Query  1    MNVKILGRLCESGKVIPFYTFKIPAGFPNPAADHIEQDFSFDRLMDLRAPHIYVAKIDGD  60
            M+V ILG L E+G  +P+Y+F++PAGF++PA D IE++ S+D L ++RAPH+Y+AKI GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMEGAKIFHDSLVVVDRSRKPSSGSIVIAALNN-EPLCKILILQGDHVVLKSANPAYPPR  119
            SM GA IF+  L+VVDRSR +  G IV+AALNN EP+CK L++ ++ V L+S N+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  HILEGEELSIWGVVRHGV  137
            HILEG++L IWGVV  ++
Sbjct  121  HILEGDNLVIWGVVNYSM  138

14) G655_23620 in NC_020912


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  133 bits (487),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 79/144 (55%), Positives = 112/144 (78%), Gaps = 1/144 (0%)

Query  1    MPVTILGPVAGSGASLRLYSSKVSAGFPSPAQDHLEREISLDEILQIRAPHTYLVRAGGD  60
            M+V ILGP++ +G  L LYS +V+AGF+SPA D +E+++SLDE+ ++RAPH YL +  GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMIRAGIHDGDLMVVDRSRQAEPGDIVIAAV-NGEPTVKRLARDGSQVVLRAENPRYAPR  119
            SMI AGI D DL+VVDRSR AE G+IV+AA+ N+EP  KRL   ++ V L++EN+ Y+++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YILEGDELLVWGVVRYSVRCHEHG  143
             ILEGD+L++WGVV YS+R H  +
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGKA  144

15) rulA in NC_007275


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  132 bits (483),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 75/138 (55%), Positives = 108/138 (79%), Gaps = 1/138 (0%)

Query  1    MNVKILGRLCASGKVIPCYTFKIPAGFPNPAADHIEQDFSFDRLMDLRAPHIYVAKIDGD  60
            M+V ILG L  +G  +P Y+F++PAGF++PA D IE++ S+D L ++RAPH+Y+AKI GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMEGAKIFHDSLVVVDRSRKPSSGSIVIAALNN-EPLCKILILQGDHVVLKSANPAYPPR  119
            SM GA IF+  L+VVDRSR +  G IV+AALNN EP+CK L++ ++ V L+S N+AYP++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  HVLEGEELSIWGVVRHGV  137
            H+LEG++L IWGVV  ++
Sbjct  121  HILEGDNLVIWGVVNYSM  138

16) rulA in NC_009434


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 74/143 (52%), Positives = 112/143 (79%), Gaps = 1/143 (0%)

Query  1    MPVHMLGPAAPATIALPFFSFCVPAGFPSPAQDHMEGSISLDELMNIRAPHTYLARADGE  60
            M+V +LGP + + I LP++SF VPAGF+SPA D +E  +SLDEL ++RAPH YLA+  G+
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMIQVGIFDRDILIIDRGREAEKGEVIIAALNN-EPLVKIFDRAGSQVILRSANPKFPPR  119
            SMI  GIFD+D++++DR+R AE GE+++AALNN EP+ K +   ++ V L+S N+ +P++
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  YLLESEELYVWGVVSYSIRIHGK  142
             +LE+++L +WGVV+YS+R HGK
Sbjct  121  HILEGDNLVIWGVVNYSMRRHGK  143

17) Psyr_1916 in NC_007005


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 75/139 (54%), Positives = 105/139 (76%), Gaps = 5/139 (3%)

Query  1    MSVTFLGPLSAGGIKLPFISLS-SVGSRSPVV---EKHVSIAELCEVREPHAYLARIEDQ  56
            MSV +LGPLS GGIKLP+ S+  + G  SP V   EKHVS+ EL EVR PH YLA+I ++
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  57   GMQGSGMCSGDMLVVDRSQYAEHGDIVVASLNARQ-ICRRLHMRGDVVILESQNPDYPPL  115
            +M G+G+   D++VVDRS+ AEHG+IVVA+LN  + IC+RL M ++VV L+S+N+ YP+ 
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  116  HVTDNDDLIILGVVTYSLK  134
            H+ + D+L+I GVV YS++
Sbjct  121  HILEGDNLVIWGVVNYSMR  139

18) PSPPH_1872 in NC_005773


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 75/139 (54%), Positives = 106/139 (77%), Gaps = 5/139 (3%)

Query  1    MSVTFLGPLSAGGIKLPLLSLS-SVGSRSPVV---EKHVSIAELCEVREPHVYLARVEDE  56
            MSV +LGPLS GGIKLPL S+  + G  SP V   EKHVS+ EL EVR PHVYLA++ ++
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  57   GMQGSGMRTGDMLVVDRSQYAEHGDIVVASLNARQ-MCRRLHMRGDVVILKSEHPDYPPL  115
            +M G+G+   D++VVDRS+ AEHG+IVVA+LN  + +C+RL M ++VV L+SE++ YP+ 
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  116  HVTDHDDLIILGVVTYSLK  134
            H+ + D+L+I GVV YS++
Sbjct  121  HILEGDNLVIWGVVNYSMR  139

19) PSPTO_2121 in NC_004578


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 75/139 (54%), Positives = 102/139 (74%), Gaps = 5/139 (3%)

Query  1    MSVTFLGPLSAGGIKLPFISMS-AVGSQSPV---IERHVSIAELCGVREPHVYLARVEDE  56
            MSV +LGPLS GGIKLP+ S   + G  SP    IE+HVS+ EL  VR PHVYLA++ ++
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  57   GMQGCGMSRGDMLVVDRSQYAEHGDIVVASLNTRQ-ICRRLHMRGHVVILQSENADYPPL  115
            +M G G+   D++VVDRS+ AEHG+IVVA+LN  + IC+RL M + VV LQSEN+ YP+ 
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  116  HVTDNDDLIILGVVTYSLK  134
            H+ + D+L+I GVV YS++
Sbjct  121  HILEGDNLVIWGVVNYSMR  139

20) rulA in NC_015740


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  100 bits (363),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 55/109 (51%), Positives = 86/109 (79%), Gaps = 1/109 (0%)

Query  1    MEGSISLDELMNIRAPHTYLARADGESMIQVGIFDRDILIIDRGREAEKGEVIIAALNN-  59
            +E  +SLDEL ++RAPH YLA+  G+SMI  GIFD+D++++DR+R AE GE+++AALNN 
Sbjct  35   IEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNS  94

Query  60   EPLVKIFDRAGSQVILRSANPKFPPRYLLESEELYVWGVVSYSIRIHGK  108
            EP+ K +   ++ V L+S N+ +P++ +LE+++L +WGVV+YS+R HGK
Sbjct  95   EPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

21) A458_17870 in NC_018028


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  100 bits (363),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 55/109 (51%), Positives = 86/109 (79%), Gaps = 1/109 (0%)

Query  1    MEGSISLDELMNIRAPHTYLARADGESMIQVGIFDRDILIIDRGREAEKGEVIIAALNN-  59
            +E  +SLDEL ++RAPH YLA+  G+SMI  GIFD+D++++DR+R AE GE+++AALNN 
Sbjct  35   IEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNS  94

Query  60   EPLVKIFDRAGSQVILRSANPKFPPRYLLESEELYVWGVVSYSIRIHGK  108
            EP+ K +   ++ V L+S N+ +P++ +LE+++L +WGVV+YS+R HGK
Sbjct  95   EPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

22) PSJM300_10570 in NC_018177


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 53/109 (49%), Positives = 87/109 (80%), Gaps = 1/109 (0%)

Query  1    MEGTISLDELMDIRAPHTYMARADGDSMIDVGIFDRDILIISRGRSAERGEVVIAALDN-  59
            +E  +SLDEL ++RAPH Y+A+  GDSMI+ GIFD+D++++ R+R+AE+GE+V+AAL+N 
Sbjct  35   IEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNS  94

Query  60   EPLVKIFDRKDDQVVLRSANKKFPPRYLLESEELQVWGVVSFSIRFHGR  108
            EP+ K +   D+ V L+S N  +P++ +LE+++L +WGVV++S+R HG+
Sbjct  95   EPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

23) Psefu_1475 in NC_015556


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 58/133 (44%), Positives = 96/133 (73%), Gaps = 3/133 (2%)

Query  10   LKSSSAVLPFLSARVPAGMGFPSPAADHIERKVSLDELLDIDAPQTYLVRAHGESMTGVG  69
            L  ++  LP+ S +VPAG  F+SPA D IE+ VSLDEL ++ AP+ YL +  G+SM G G
Sbjct  9    LSEGGIKLPLYSFQVPAG--FASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAG  66

Query  70   IFHDDVMVVNRALDAGPGDVVIAAI-NGDTLVKTFCREGDQIILRSENPKYAPRYVLEGD  128
            IF+ D++VV+R+  A  G++V+AA+ N++ + K +   ++ + L+SEN+ Y+++ +LEGD
Sbjct  67   IFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGD  126

Query  129  ELMVWGVVITNLR  141
            +L++WGVV  ++R
Sbjct  127  NLVIWGVVNYSMR  139

24) Galf_2402 in NC_014394


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 60/138 (44%), Positives = 95/138 (69%), Gaps = 2/138 (1%)

Query  8    TITAPLAGSPPILAPLFSHKVPAGFPSPADDYIEGRLSLDQHLIQHKDATFFVRAKGNSM  67
             I +PL+ +   L PL+S +VPAGF+SPA DYIE ++SLD+    +    ++ +  G+SM
Sbjct  4    VILGPLSEGGIKL-PLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSM  62

Query  68   VGAGIFDGDLLVVDRSLNPSSGDIVIAVL-DAELTVKRLIRRDGMVILKPENPDFSEIVL  126
            +GAGIFD DL+VVDRS  +  G+IV+A L ++E   KRL+  DG+V L++EN+ ++   +
Sbjct  63   IGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHI  122

Query  127  KEGQELQVWGVVTSTTKK  144
             EG++L +WGVV  + ++
Sbjct  123  LEGDNLVIWGVVNYSMRR  140

25) A464_1997 in NC_021870


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 59/126 (47%), Positives = 88/126 (70%), Gaps = 2/126 (1%)

Query  13   ISLPFFSYLVPCGFPSPAADYIERRIDLNELLVSHPSSTYFVKATGDSMIEAGINDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRTAEHGDIVIAAVDGEFTV-KRL-QLRPTVQLNPMNSAYSPIIVGSEDTLDVFGV  130
            VVD SRTAEHG+IV+AA++    + KRL  +   V+L++ NSAY++  +   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIVK  136
            V + ++
Sbjct  134  VNYSMR  139

26) SARI_01639 in NC_010067


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 60/128 (47%), Positives = 87/128 (68%), Gaps = 2/128 (1%)

Query  11   GIISLPFFSYLVPCGFPSPAADYVEQRIDLNELLVSHPGSTYFVKATGDSMIEAGISDGD  70
            G I LP++S+ VP GF+SPA DY+E+++ L+EL   ++   Y+ K  GDSMI AGI D D
Sbjct  12   GGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKD  71

Query  71   LLVVDSSRTAEHGDIVIAAVGGEFTV-KRL-QLRPTVQLNPMNSAYSPIIIGSEDTLDVF  128
            L+VVD SRTAEHG+IV+AA+     + KRL  +   V+L++ NSAY++  I   D L + 
Sbjct  72   LIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIW  131

Query  129  GVVTFIVK  136
            GVV + ++
Sbjct  132  GVVNYSMR  139

27) PSPA7_0100 in NC_009656


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 93.1 bits (334),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 59/140 (43%), Positives = 97/140 (70%), Gaps = 1/140 (0%)

Query  5    MALTVIGRPSRPGLRLPLFLSRVAAGFPSPAEDHIEASLSLDELCVVHPAATFFLRVVGD  64
            M++ ++G  S  G++LPL+  +V+AGF+SPA D IE  +SLDEL  V+++  ++ +++GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  65   SMTGLGIFDGDILVVDRSITPRAGMVVVAVV-NGEFTCKQLAYEHGAPVLRAANKAYPDI  123
            SM G GIFD D++VVDRS T+  G +VVA + N+E  CK+L   +G   L++ N AYP  
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  124  RLRDGEDLEVFGVVTRCIHK  143
            ++ +G++L + GVV   +++
Sbjct  121  HILEGDNLVIWGVVNYSMRR  140

28) CFSAN002050_16000 in NC_021818


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 58/124 (47%), Positives = 88/124 (71%), Gaps = 2/124 (1%)

Query  15   LPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIDAGINDGDLLVV  74
            LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI+AGI D DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  75   DSSRTAEHGDIVIAAVDGEFTV-KRL-QLRPTVQLNPMNSAYSPIIVGSEDTLDVFGVVT  132
            D SRTAEHG+IV+AA++    + KRL  +   V+L++ NSAY++  +   D L + GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  133  FIVK  136
            + ++
Sbjct  136  YSMR  139

29) Entcl_1884 in NC_014618


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 92.6 bits (332),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 60/124 (49%), Positives = 89/124 (72%), Gaps = 2/124 (1%)

Query  15   FPLYSTLVPCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKTSGDSMKDAGIGEGDLLVV  74
            +PLYS  VP GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSM +AGI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  75   DSSRKAHHGDIVIAAVDGEFTV-KRL-LLHPVIMLKAENSAYAPITIGTEDNLDIFGVVT  132
            D SR A+HG+IV+AA++    + KRL +++ V+ L++ENSAY++  I   DNL I GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  133  YIVK  136
            Y ++
Sbjct  136  YSMR  139

30) CFSAN001992_01470 in NC_020307


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 92.6 bits (332),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 58/126 (47%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNSAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + NSAY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

31) MDS_2171 in NC_015410


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 92.3 bits (331),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 60/140 (43%), Positives = 95/140 (68%), Gaps = 1/140 (0%)

Query  1    MPVTFLGRLARPSQPLPLFLCRVSAGFPSPAEDHVDANLSLDDLCVQHPAATFFLRVRGD  60
            M+V +LG L+  +  LPL+  +V+AGF+SPA D ++ ++SLD+L   +++  ++ ++ GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  61   SMRDLGIFDGDIVVVDRSLTPRVG-MVVVALVNGAFTCKQLGSQDGRPVLHAANPAYPDI  119
            SM + GIFD D++VVDRS T+  G +VV AL N+   CK+L   DG   L++ N+AYP  
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  120  HLGEGEELEIFGVVTNCIHR  139
            H+ EG++L I GVV   ++R
Sbjct  121  HILEGDNLVIWGVVNYSMRR  140

32) L483_20240 in NC_021491


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 92.0 bits (330),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 56/106 (53%), Positives = 79/106 (75%), Gaps = 1/106 (0%)

Query  13   QVSIDELLHLRAPSVYLVKVDGESMQGAGIYTGDLLVVDRLVEARSGHIIIAAV-NGEAT  71
            +VS+DEL ++RAP VYL K+ G+SM GAGI+  DL+VVDR   A  G+I++AA+ N+E+ 
Sbjct  38   HVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPI  97

Query  72   CKRMVIRDRQVVLMSENPKYPSRYILEGDRFEVWGVVTHSIRDHDR  117
            CKR+ + D  V L SEN+ YPS+ ILEGD + +WGVV  S+R H++
Sbjct  98   CKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

33) SEEB0189_09490 in NC_021844


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

34) SBOV20591 in NC_022241


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

35) umuD in NC_006905


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

36) CFSAN002050_16800 in NC_021818


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

37) SEEH1578_19260 in NC_021810


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

38) CFSAN002069_21850 in NC_021812


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

39) SeHA_C2216 in NC_011083


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

40) SNSL254_A2163 in NC_011080


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

41) SSPA0812 in NC_011147


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

42) umuD in NC_006511


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

43) SPAB_01144 in NC_010102


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

44) umuD in NC_012125


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

45) SeSA_A2159 in NC_011094


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

46) STY2206 in NC_003198


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

47) TY21A_04510 in NC_021176


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

48) umuD in NC_004631


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKATGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

49) Rahaq2_4854 in NC_016835


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.5 bits (328),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 90/126 (72%), Gaps = 2/126 (1%)

Query  17   VTFPLFSDLVPCGFPSPAQDYVERRIDLNELMIQHPSATYFVRVTGDSMIDAGIGEGDLL  76
            + +PL+S  VP GF+SPA DY+E+++ L+EL   +++  Y+ ++ GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  77   VVDSSRKAEHGHIVIAAVDGEFTV-KRL-QLHPVVMLKPENSVYAPIMIGGEENLEVFGV  134
            VVD SR AEHG+IV+AA++    + KRL  ++ VV L++ENS Y++  I   +NL + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  135  VTYIVK  140
            V Y ++
Sbjct  134  VNYSMR  139

50) SE451236_15920 in NC_021820


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

51) umuD in NC_016856


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

52) STMMW_19781 in NC_016854


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

53) umuD in NC_003197


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

54) umuD in NC_016810


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

55) umuD in NC_016857


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

56) STMDT12_C20190 in NC_016860


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

57) STU288_06380 in NC_021151


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

58) umuD in NC_016863


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

59) CFSAN001921_07080 in NC_021814


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/126 (46%), Positives = 85/126 (68%), Gaps = 2/126 (1%)

Query  13   IPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLL  72
            I LP++S+ VP GF+SPA DYIE+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRNADHGDIVIAAIEGEFTV-KRL-QLRPTVQLIPMNGAYRPIPVGSEDTLDIFGV  130
            VVD SR A+HG+IV+AA++    + KRL  +   V+L + N+AY +  +   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIIK  136
            V + ++
Sbjct  134  VNYSMR  139

60) Rvan_2447 in NC_014664


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/127 (45%), Positives = 91/127 (72%), Gaps = 1/127 (0%)

Query  1    MALSLFLSRVPAGFPSPADDYLEGELDLNKFLIRNPAATFYVRLSGDSMVMAGLFDGDIL  60
            + L+L+  +VPAGF+SPA DY+E ++ L+ +    ++  +  ++ GDSM+ AG+FD D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  61   VVDRAISARHRHIVVAVV-DGELTVKRLWSSGGVIELRSENPAYQPIKMVEGRELVIWGV  119
            VVDR+ +A H +IVVA + ++E   KRL   +GV+ L+SEN+AY +  ++EG +LVIWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  120  VTGSIRR  126
            V  S+RR
Sbjct  134  VNYSMRR  140

61) RORB6_08030 in NC_021066


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 89.4 bits (320),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 60/126 (48%), Positives = 88/126 (70%), Gaps = 2/126 (1%)

Query  13   VALPLFSDLVPCGFPSPAQDYVERRIDLNELMIQHPSATYFVKSTGDSMIDAGIGEGDLL  72
            + LPL+S  VP GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRKAEHGHIVIAAVDGEFTV-KRL-QLHPVAMLKPENSAYSPIVIGREDRLDIFGV  130
            VVD SR AEHG+IV+AA++    + KRL  ++ V  L++ENSAY++  I   D L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIVK  136
            V Y ++
Sbjct  134  VNYSMR  139

62) NH8B_1668 in NC_016002


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 53/128 (42%), Positives = 90/128 (71%), Gaps = 1/128 (0%)

Query  14   SLALPVYGSRVPAGFPSPADDYLETALDLNQYLIEDAAATFMVRVSGDSMLGAGISDGDV  73
            ++ LP+Y+ +VPAGF+SPA DY+E  + L++     A+  ++ ++ GDSM+GAGI D D+
Sbjct  13   GIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDL  72

Query  74   LVVDRSIPPAHGQIVLAAVDGEFTV-KRLHKRSDRVALLPENPAYPPIELHNGQELQVWG  132
            +VVDRS  + HG+IV+AA++    + KRL    + V L +EN+AYP+ ++ +G++L +WG
Sbjct  73   IVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWG  132

Query  133  VVTGCIKK  140
            VV   +++
Sbjct  133  VVNYSMRR  140

63) NH8B_2099 in NC_016002


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 53/128 (42%), Positives = 90/128 (71%), Gaps = 1/128 (0%)

Query  14   SLALPVYGSRVPAGFPSPADDYLETALDLNQYLIEDAAATFMVRVSGDSMLGAGISDGDV  73
            ++ LP+Y+ +VPAGF+SPA DY+E  + L++     A+  ++ ++ GDSM+GAGI D D+
Sbjct  13   GIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDL  72

Query  74   LVVDRSIPPAHGQIVLAAVDGEFTV-KRLHKRSDRVALLPENPAYPPIELHNGQELQVWG  132
            +VVDRS  + HG+IV+AA++    + KRL    + V L +EN+AYP+ ++ +G++L +WG
Sbjct  73   IVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWG  132

Query  133  VVTGCIKK  140
            VV   +++
Sbjct  133  VVNYSMRR  140

64) Msip34_1165 in NC_012969


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 51/126 (41%), Positives = 83/126 (66%), Gaps = 4/126 (3%)

Query  15   IPLPFYDIPVSAGQSRFPSPAQDYEIAEIDLNKQLITNPPATFLTRVTGDSMTGVGIYPG  74
            I LP+Y + V+AG   F+SPA DY   ++ L+      +P  +L+++ GDSM G GI+  
Sbjct  14   IKLPLYSFQVPAG---FASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDK  70

Query  75   SILVVNRALKPRSSSIVVVLLD-GELMVKRLYKHAGMVKLLSENPTYAPITLTEGQELMI  133
             ++VV+R+  +  + IVV  L+ +E + KRL+   G+VKL SEN++Y++  + EG++L+I
Sbjct  71   DLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVI  130

Query  134  WGVVTY  139
            WGVV Y
Sbjct  131  WGVVNY  136

65) MPQ_1224 in NC_014733


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 88.9 bits (318),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 52/126 (42%), Positives = 83/126 (66%), Gaps = 4/126 (3%)

Query  15   IPLPFYDISVSAGQSRFPSPAQDYEIAEIDLNKQLITNPPATFLTRVTGDSMTGVGIYPG  74
            I LP+Y + V+AG   F+SPA DY   ++ L+      +P  +L+++ GDSM G GI+  
Sbjct  14   IKLPLYSFQVPAG---FASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDK  70

Query  75   SILVVNRALKPRSSSIVVVLLD-GELMVKRLYKHAGMVKLLSENPAYAPITLTEGQELMI  133
             ++VV+R+  +  + IVV  L+ +E + KRL+   G+VKL SEN+AY++  + EG++L+I
Sbjct  71   DLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVI  130

Query  134  WGVVTY  139
            WGVV Y
Sbjct  131  WGVVNY  136

66) umuD in NC_016514


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 88.6 bits (317),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 58/129 (45%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  38   IALPLFSDLVQCGFPSPAADYVEQRIDLNELLVSHPSSTYFVKAAGDSMIEAGISDGDLL  97
            I LPL+S  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  98   VVDSSRTAEHGDIVIAAVEGEFTV-KRL-QLRPTVQLNPMNSAYSPIVVGSEDTLDVFGV  155
            VVD SRTAEHG+IV+AA++    + KRL  +   V+L++ NSAY++  +   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  156  VTFIVKSAS  164
            V + ++  +
Sbjct  134  VNYSMRRHG  142

67) Selin_1933 in NC_014836


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 87.6 bits (313),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 58/141 (42%), Positives = 98/141 (70%), Gaps = 4/141 (2%)

Query  24   MSVTVLGACPERGAPPPIPLFVEGVSAGFPSPARDYVDRSLDLNELCIRHPAATYFVRAD  83
            MSV +LG+ +E G    +PL+   V+AGF+SPA DY+++ + L+EL   +++  Y+ +  
Sbjct  1    MSVVILGPLSEGGIK--LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKIL  58

Query  84   GDSMIGAGIFSGDILIVDRSLEAADGDIIIACL-HGELLVKRL-RLQGQVRLEAMNPDYP  141
            GDSMIGAGIF  D+++VDRS  A +G+I++A L ++E + KRL  ++G V+L++ N+ YP
Sbjct  59   GDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYP  118

Query  142  PLELHDESELEVFGVVIHSIR  162
            + ++ +  +L + GVV  S+R
Sbjct  119  SKHILEGDNLVIWGVVNYSMR  139

68) Ent638_2213 in NC_009436


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 59/129 (46%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   ITIPLFSDLVQCGFPSPAADYVEQRIDLNELLVQHPSATYFVKAAGDSMIEAGISDGDLL  72
            I +PL+S  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRTAEHGDIVIAAVEGDFTV-KRL-QLRPNVQLNPMNSAYSPIIIGSEDTLDVFGV  130
            VVD SRTAEHG+IV+AA++    + KRL  +   V+L++ NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIVKSAG  139
            V + ++  G
Sbjct  134  VNYSMRRHG  142

69) umuD in NC_006369


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 53/120 (45%), Positives = 81/120 (68%), Gaps = 1/120 (0%)

Query  13   IPLYTSSVRAGFPSPGDDYIESMLDLNEYLIKHPASTFFVRASGESMINAGIYSGDILIV  72
            +PLY+  V AGF+SP+ DYIE  + L+E    +++  ++ +  G+SMI AGI+  D+++V
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  73   DRGIEATHGKIVIVAL-NGELTVKRLSRQHGQVKLLAENPDFPPIDITEEYDMVIWGVVT  131
            DR+  A HG IV+ AL N+E   KRL   +G VKL +EN+ +P+ +I E  ++VIWGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

70) umuD in NC_006368


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 53/120 (45%), Positives = 81/120 (68%), Gaps = 1/120 (0%)

Query  13   IPLYTSSVRAGFPSPGDDYIESMLDLNEYLIKHPASTFFVRASGESMINAGIYSGDILIV  72
            +PLY+  V AGF+SP+ DYIE  + L+E    +++  ++ +  G+SMI AGI+  D+++V
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  73   DRGIEATHGKIVIVAL-NGELTVKRLSRQHGQVKLLAENPDFPPIDITEEYDMVIWGVVT  131
            DR+  A HG IV+ AL N+E   KRL   +G VKL +EN+ +P+ +I E  ++VIWGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

71) EAE_21895 in NC_015663


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 86.8 bits (310),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 59/129 (46%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  13   VALPLFSDLVPCGFPSPAQDYVERRIDLNELLIQHPGATYFVKSSGDSMIGAGIGDGDLL  72
            + LPL+S  VP GF+SPA DY+E+++ L+EL   ++   Y+ K  GDSMIGAGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRKAVHGSIVIAAVDGEFTV-KRL-QLHPVVMLKPDNPAYQPIMPGSEECLEIFGV  130
            VVD SR A HG IV+AA++    + KRL  ++ VV L+++N+AY +      + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIVKSAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

72) umuD in NC_016514


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 86.5 bits (309),  Expect = 7e-19, Method: Compositional matrix adjust.
 Identities = 57/129 (45%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  27   IAIPLFSDLVQCGFPSPAADYVEQRIDLNELLVSHPSSTYFVKAAGDSMIEAGISDGDLL  86
            I +PL+S  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  87   VVDSSRTAEHGDIVIAAVEGEFTV-KRL-QLRPTVQLNPMNSAYSPIIVGSEDTLDVFGV  144
            VVD SRTAEHG+IV+AA++    + KRL  +   V+L++ NSAY++  +   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  145  VTFIVKSAS  153
            V + ++  +
Sbjct  134  VNYSMRRHG  142

73) Dbac_0176 in NC_013173


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 86.5 bits (309),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 53/124 (43%), Positives = 80/124 (65%), Gaps = 1/124 (0%)

Query  30   PLYLDRISAGFPSPADDYIETALDLNTYLIRNPAATFMVRVSGDSMTGAGISDGDVLVVD  89
            PLY  +++AGF+SPA DYIE  + L+      ++  ++ ++ GDSM GAGI D D++VVD
Sbjct  17   PLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVD  76

Query  90   RSEQPAHGKIVVAVLDGELTV-KRLVMKNGQTLLAPENPCYQPITVTEGQDLHVWGVVTG  148
            RS  + HG IVVA L+    + KRL M +G   L +EN+ Y +  + EG++L +WGVV  
Sbjct  77   RSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNY  136

Query  149  VVRK  152
             +R+
Sbjct  137  SMRR  140

74) Msip34_1483 in NC_012969


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 86.5 bits (309),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 59/139 (43%), Positives = 90/139 (65%), Gaps = 7/139 (5%)

Query  13   LEVPTLNPL---ALPRPIYSGKVRAGQSRFPSPAQDYEQAELDLNKRLVRNPPATFFFTV  69
            + V  L PL   ++  P+YS +V AG   F+SPA DY + ++ L+      +P  ++  +
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAG---FASPAVDYIEKHVSLDELAEVRAPHVYLAKI  57

Query  70   SGDSMIGAGIFEGSTLVVDRSIKAKSTSIVVA-MVEGELMVKRLYKRGAVVKLLSDNPAY  128
             GDSMIGAGIF+   +VVDRS  A    IVVA + ++E + KRL+  ++VVKL S+N+AY
Sbjct  58   LGDSMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAY  117

Query  129  APITLTEGQELIIWGVVTY  147
            ++  + EG++L+IWGVV Y
Sbjct  118  PSKHILEGDNLVIWGVVNY  136

75) ECENHK_11805 in NC_018405


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 85.5 bits (305),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/129 (44%), Positives = 86/129 (67%), Gaps = 2/129 (1%)

Query  13   IAIPLFSDLVQCGFPSPAADYVEQRIDLNELLVSHPSSTYFVKAAGDSMIEAGISDGDLL  72
            I +PL+S  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSRTAEHGDIVIAAVDGEFTV-KRL-QLRPTVQLIPMNSSYSPIIVGSEDTLDVFGV  130
            VVD SRTAEHG+IV+AA++    + KRL  +   V+L + NS+Y++  +   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIVKSAS  139
            V + ++  +
Sbjct  134  VNYSMRRHG  142

76) Mrad2831_6256 in NC_010510


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.9 bits (303),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 55/135 (41%), Positives = 88/135 (66%), Gaps = 7/135 (5%)

Query  13   SPNAVRVPLIGQALCAGFPSPADDFLEGALELPRWLVPNPPATFLWRIAGSSMEGAGIYD  72
            S  ++++PL +  + AGF+SPA D++E  + L       +P  +L +I G SM GAGI+D
Sbjct  10   SEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFD  69

Query  73   RDLACVDRSLKAGHGSIVVAAV-DGQMSCKRLVIDGNVARLAFCNPDLPAFAVDELGEG-  130
            +DL  VDRS  A HG IVVAA+ +++  CKRL + + V +L   +++ +A++  ++ EG 
Sbjct  70   KDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKL---QSENSAYPSKHILEGD  126

Query  131  --VIWGVVRFSIRWH  143
              VIWGVV +S+R+H
Sbjct  127  NLVIWGVVNYSMRRH  141

77) Kkor_1106 in NC_013166


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 55/120 (46%), Positives = 84/120 (70%), Gaps = 2/120 (1%)

Query  16   IPLYSGKISAGFPGVVDEHMEDTLSLDQLLIQNPATTFFAKVEGDSMIGAGIFQNDILVV  75
            +PLYS +++AGF++   + +E  +SLD+L    ++  ++AK+ GDSMIGAGIF++D++VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  76   DRSLTAKDKDVVVAMLDNEFTV-KRLC-TSGALRLQAENPAYQDILITGESELVIWGVVT  133
            DRS TA + ++VVA L+N   + KRL    G ++LQ+EN+AY    I    +LVIWGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

78) Sputw3181_1083 in NC_008750


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 55/132 (42%), Positives = 89/132 (68%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVKLIPRNQAYEPIHIPEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   VKL + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

79) VCD_003726 in NC_012668


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 55/132 (42%), Positives = 89/132 (68%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVKLIPRNQAYEPIHIPEGAELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   VKL + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

80) Vch1786_I0091 in NC_016445


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 55/132 (42%), Positives = 89/132 (68%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVKLIPRNQAYEPIHIPEGAELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   VKL + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

81) Mmc1_2081 in NC_008576


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 88/129 (69%), Gaps = 1/129 (0%)

Query  3    LPIPFFTSLVPAGFPSPADDYLEGHLDLNELLIKRPAATFFVRVTGDSMIGAGIHSGDIL  62
            + +P+++  VPAGF+SPA DY+E H+ L+EL   R++  ++ ++ GDSMIGAGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  63   VVDRSLEPINGSIVIAVV-SGELTVKRLKKDGGRVWLMPENKDFQPMEISEEQEMTVWGV  121
            VVDRS  + +G IV+A + ++E   KRL   +G V L +EN  + + +I E +++ +WGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  122  VRSAIHQFG  130
            V  ++++ G
Sbjct  134  VNYSMRRHG  142

82) CKO_01842 in NC_009792


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 84.4 bits (301),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 56/129 (44%), Positives = 85/129 (66%), Gaps = 2/129 (1%)

Query  12   VALPMFSDLVQCGFPSPAQDYVESRIDLNELLVRHPSATYFVKATGDSMRDAGIGEGDLL  71
            + LP++S  V  GF+SPA DY+E ++ L+EL   +++  Y+ K  GDSM +AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  72   VVDSSRKAGHGDIVIAAVDGEFTV-KRL-LLHPAVMLKPENSVYKPIMIGSEDNLEVFGV  129
            VVD SR A HG+IV+AA++    + KRL +++  V L++ENS Y +  I   DNL + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  130  VTYIVKSAG  138
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

83) A3UG_12450 in NC_018079


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 83.9 bits (299),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 57/129 (45%), Positives = 86/129 (67%), Gaps = 2/129 (1%)

Query  13   IALPLFSDLVQCGFPSPAADYVEQRIDLNELLVAHPSSTYFVKAAGDSMIEAGISDGDLL  72
            I LPL+S  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSSLTAEHGDIVIAAVEGEFTV-KRL-QLRPTVQLIPMNSAYSPIIVGSEDSLDVFGV  130
            VVD S TAEHG+IV+AA++    + KRL  +   V+L + NSAY++  +   D+L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFIVKSAS  139
            V + ++  +
Sbjct  134  VNYSMRRHG  142

84) H650_03735 in NC_021500


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 83.4 bits (297),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 89/133 (67%), Gaps = 4/133 (3%)

Query  13   IPLPLFAERVPCGFPSPAQDYVEERLDLNKLVVKHPSATYFVRVSGDSMIGAGISDGDLL  72
            I LPL++ +VP GF+SPA DY+E ++ L+ L   +++  Y+ ++ GDSMIGAGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDRSLTPVHGDIVVAAVAGEFTV--KELRTRPVLQLIPHNVHYAPIVFQAEEELQIFGV  130
            VVDRS T+ HG+IVVAA+     +  + +    V++L ++N  Y++  +   ++L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTFTLKSNRHVRA  143
            V ++++  RH +A
Sbjct  134  VNYSMR--RHGKA  144

85) Metme_1988 in NC_015572


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 83.4 bits (297),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 82/121 (68%), Gaps = 1/121 (0%)

Query  34   RLPLFAGKVSAGFPSPAADYVDKTLDLNDLLVQKPAATFFVRAQGESMLGAGIHPNDILV  93
            +LPL++ +V+AGF+SPA DY++K + L++L   +++  ++ +  G+SM+GAGI  +D++V
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIV  74

Query  94   VDRSLKPMSGKIVICALNGELTV-KRLVFDNQQWKLRAENPVYPDFMLTDELELVVWGVV  152
            VDRS  +  G IV+ ALN    + KRL   +   KL++EN+ YP   + +  +LV+WGVV
Sbjct  75   VDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

Query  153  T  153
             
Sbjct  135  N  135

86) Q7C_554 in NC_017856


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 83.1 bits (296),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 89/132 (68%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVMLIPRNPAYEPIHIPEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   V L + N+AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

87) Entas_1887 in NC_015968


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 53/132 (41%), Positives = 89/132 (68%), Gaps = 2/132 (1%)

Query  12   DMELPLFLERVACGFPSPAQDYVEDRIDLNKLAVKHPSATYFVKVSGDSMIGAGIGDGDL  71
            ++ LPL+  +V+ GF+SPA DY+E ++ L+ LA  +++  Y+ K+ GDSMIGAGI D DL
Sbjct  13   GIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDL  72

Query  72   LVVDRSLTAGHGDIVVAAVDGEFTV--KELQTRPVLRLLPHNTRYQPITFHSEEELQIFG  129
            +VVDRS TA HG+IVVAA++    +  + +    V++L ++N+ Y +  +   ++L I G
Sbjct  73   IVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWG  132

Query  130  VVTHTLKTHKQS  141
            VV  +++ H ++
Sbjct  133  VVNYSMRRHGKA  144

88) umuD in NC_010554


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 82.8 bits (295),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 53/132 (41%), Positives = 88/132 (67%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVMLIPRNQAYEPIHVSEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   V L + N AY + H+ EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

89) Acife_0725 in NC_015942


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 82.8 bits (295),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 88/127 (70%), Gaps = 3/127 (2%)

Query  34   TLPLMVSRIAAGFPSPADDYVEKQIDLNTHLIQHREA-TFILRVTGWSMRDAGIFDGDEI  92
             LPL   +++AGF+SPA DY+EK++ L+ +L + R +  ++ ++ G SM +AGIFD D I
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLD-ELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  93   IVDRAITPVDGKIVVAAINGDLTV-KRLRRIGSAVHLVAENPEFPAIILKEGEELCIWGV  151
            +VDR+ T+ +G IVVAA+N    + KRL  +++ V L +EN+ +P+  + EG++L IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  152  VTRVLHR  158
            V   ++R
Sbjct  134  VNYSMRR  140

90) umuD in NC_016112


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 82.1 bits (292),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 56/128 (44%), Positives = 87/128 (68%), Gaps = 1/128 (0%)

Query  17   TVNLPLFAGKVSAGFPSPADDYIEKTLDLNELLVQKPAATYFVRAQGESMLGAGIHPNDI  76
             ++LPL++ +V+AGF+SPA DYIEK + L+EL   +++  Y+ +  G+SM+GAGI  +D+
Sbjct  13   GIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDL  72

Query  77   LVVDRSLEPVPGRIVICAL-NGELVVKRLKRLGGQWVLGSENPAYKDIVLREEMDTVIWG  135
            +VVDRS  +  G IV+ AL N+E + KRL  ++G   L SEN+AY    + E  + VIWG
Sbjct  73   IVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWG  132

Query  136  VVTCVIHH  143
            VV   +++
Sbjct  133  VVNYSMRR  140

91) Entcl_2117 in NC_014618


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.8 bits (291),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 57/127 (45%), Positives = 85/127 (67%), Gaps = 2/127 (1%)

Query  19   FPFYSSLVPCGFPSPAQDYVEKRIDLNELLVSHPSATYFVKASGDSMVEAGIGDGDLLVV  78
            +P+YS  VP GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSM+ AGI D DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  79   DSALTAEHGNIVIAAVDGEFTV-KRL-QLRPTVQLIPMNSAYKPIVIESEGQLSIFGVVT  136
            D + TAEHG+IV+AA++    + KRL  +   V+L + NSAY +  I   ++L I GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  137  FIIKAAG  143
            + ++  G
Sbjct  136  YSMRRHG  142

92) KPK_2837 in NC_011283


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.8 bits (291),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 55/127 (44%), Positives = 86/127 (68%), Gaps = 2/127 (1%)

Query  36   LPLYSDLVQCGFPSPAQDYVEQRIDLNELLVNHPSATYFVKAAGDSMKDAGIGEGDLLVV  95
            LPLYS  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSM +AGI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  96   DSSRTAVHGDIVIAAVDGEFTV-KKL-QLHPRVQLNPMNPAYSPIVVGSEDTLDVFGVVT  153
            D SRTA HG+IV+AA++    + K+L  ++  V+L++ N+AY++  +   D L + GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  154  YIIKSAG  160
            Y ++  G
Sbjct  136  YSMRRHG  142

93) amad1_05805 in NC_019393


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.8 bits (291),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 88/132 (67%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQMLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVMLIPRNQAYEPIHIPEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   V L + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

94) I636_05820 in NC_021714


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.8 bits (291),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 88/132 (67%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQMLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVMLIPRNQAYEPIHIPEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   V L + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

95) I635_05785 in NC_021713


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.8 bits (291),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 54/132 (41%), Positives = 88/132 (67%), Gaps = 5/132 (3%)

Query  20   LRIPLFMERVSAGFPSPAQDYVEQMLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL  79
            +++PL+  +V+AGF+SPA DY+E+ + L+EL   R++  ++ ++ GDSMI+AGI   D++
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  80   VVDRSVQAEHGDIVIAGIHGELTV--KELQLRPCVMLIPRNQAYEPIHIPEGTELEIFGV  137
            VVDRS  AEHG+IV+A+++    +  + + +   V L + N AY + HI EG +L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  138  VTNVVRNMRRKS  149
            V     +MRR +
Sbjct  134  VNY---SMRRHG  142

96) HIMB59_00010580 in NC_018644


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.5 bits (290),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 51/119 (43%), Positives = 80/119 (68%), Gaps = 0/119 (0%)

Query  21   RISAGFPSPADDYIENNLSLSELLIRNHLSTFLMKTSGDSMMDVGINDGDILVVDRSIEP  80
            +++AGF+SPA DYIE+++SL EL        +L K  GDSM++ GI D D++VVDRS  +
Sbjct  22   QVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTA  81

Query  81   KNRDIVIAILEGNLTVKRLLFKTNGSVVLKSENTAYKDIKIPESADLEIWGVVTSAIHQ  139
             + +IV+A L+ +  + + LF  +G V L+SEN+AY    I E+ +L IWGVV  ++++
Sbjct  82   EHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRR  140

97) umuD in NC_009648


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.5 bits (290),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 55/127 (44%), Positives = 86/127 (68%), Gaps = 2/127 (1%)

Query  15   LPLYSDLVQCGFPSPAQDYVEQRIDLNELLVNHPSATYFVKAAGDSMKDAGIGEGDLLVV  74
            LPLYS  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSM +AGI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  75   DSSRTAVHGDIVIAAVDGEFTV-KKL-QLHPRVQLNPMNPAYSPIVVGSEDTLDVFGVVT  132
            D SRTA HG+IV+AA++    + K+L  ++  V+L++ N+AY++  +   D L + GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  133  YIIKSAG  139
            Y ++  G
Sbjct  136  YSMRRHG  142

98) umuD in NC_015702


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 81.3 bits (289),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 52/121 (43%), Positives = 82/121 (68%), Gaps = 1/121 (0%)

Query  46   RLPLYHTTVSAGFPSPAEDHIERKLDLNELLIKHPSATFFLKVSGHSMIKVGIHHNDILI  105
            +LPLY   V+AGF+SPA D IE+ + L+EL   +++  ++ K+ G+SMI  GI ++D+++
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIV  74

Query  106  VDRSLEPSHGKIVIASLNGELTV-KRLRCEGKRIQLVAENDAYPPIEISSEDDFRIWGVV  164
            VDRS  + HG IV+A+LN    + KRL   +  ++L +EN AYP+ +I   D++ IWGVV
Sbjct  75   VDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

Query  165  T  165
             
Sbjct  135  N  135

99) umuD in NC_011740


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.7 bits (287),  Expect = 4e-17, Method: Compositional matrix adjust.
 Identities = 53/126 (43%), Positives = 84/126 (67%), Gaps = 2/126 (1%)

Query  13   ITLPLFSDLVPCGFPSPAADYVEQRIDLNQLVIQHPSATYFVKAAGDSMIEAGIGDGDLL  72
            I LPL+S  VP GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSAITASHGDIVIAAVDGEFTV-KRL-QLRPSVQLVPMNSSYSPITLGSEESLNVFGV  130
            VVD + TA HG+IV+AA++    + KRL  +   V+L + NS+Y++  +   ++L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTHVVK  136
            V   ++
Sbjct  134  VNYSMR  139

100) Bind_3751 in NC_010580


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 53/127 (42%), Positives = 81/127 (64%), Gaps = 2/127 (1%)

Query  20   LPYFLEGLCAGFPSPADDYLDESIDLNDLLIRNQPATFLWRVDGHSMREAGIFHGDLLVV  79
            LP +   + AGF+SPA DY++  + L++L     P  +L ++ G+SM  AGIF+ DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  80   DRSLAPADGDIVVVIVNGERSL-KRLQIRKGQLTLSFENKDYPEGLALHEGDEIEIWGVV  138
            DRS ++ +G+IVV  +N   ++ KRL +  G + L  EN  YP    L EGD++ IWGVV
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHIL-EGDNLVIWGVV  134

Query  139  RCSIHWH  145
              S+++H
Sbjct  135  NYSMRRH  141

101) D782_2257 in NC_020063


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 85/123 (70%), Gaps = 2/123 (1%)

Query  15   PLFSDLVPCGFPSPARDYVERGIDLNEFMVAHPSATYFIRATGDSMIDAGIGNGDLLVVD  74
            PL+S  VP GF+SPA DY+E+ + L+E+   +++  Y+ +  GDSMI+AGI + DL+VVD
Sbjct  17   PLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVD  76

Query  75   SARTARHGDIIIAAIDGEFTV-KRL-QLRPIIQLVPCNPAYAPICINEDMPLDIFGVVTF  132
             +RTA HG+I++AA++    + KRL  +  +++L + N+AY++  I E+  L I GVV +
Sbjct  77   RSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNY  136

Query  133  IVK  135
             ++
Sbjct  137  SMR  139

102) A79E_3005 in NC_018522


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

103) KPHS_20650 in NC_016845


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

104) N559_3110 in NC_022082


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

105) KPN2242_09025 in NC_017540


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

106) KPN_01183 in NC_009648


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

107) umuD in NC_012731


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.2 bits (285),  Expect = 6e-17, Method: Compositional matrix adjust.
 Identities = 52/129 (41%), Positives = 87/129 (68%), Gaps = 2/129 (1%)

Query  13   VSFPFFADLVQCGFPSPAQDYVEKRIDLNELLVQHPSATYFVKAAGDSMIDAGIDEGDLL  72
            + +P+++  V  GF+SPA DY+EK++ L+EL   +++  Y+ K  GDSMI+AGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDSARKAEHGDIVIAAVGGEFTV-KKLQLL-PRVQLNPMNPAYSPIVVGREETLDIFGV  130
            VVD +R AEHG+IV+AA+     + K+L ++   V+L++ N+AY++  +   + L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VTYIIKAAG  139
            V Y ++  G
Sbjct  134  VNYSMRRHG  142

108) umuD in NC_011283


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.0 bits (284),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 86/127 (68%), Gaps = 2/127 (1%)

Query  36   IPLYSDLVQCGFPSPAQDYVEQRIDLNELLVNHPSATYFVKAAGDSMKDAGIGEGDLLVV  95
            +PLYS  V  GF+SPA DY+E+++ L+EL   +++  Y+ K  GDSM +AGI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  96   DSSRTAVHGDIVIAAVDGEFTV-KKL-QLHPRVQLNPMNPAYSPIIVGSKDTLDVFGVVT  153
            D SRTA HG+IV+AA++    + K+L  ++  V+L++ N+AY++  +   D L + GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  154  YIIKSAG  160
            Y ++  G
Sbjct  136  YSMRRHG  142

109) MU9_1875 in NC_020418


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 80.0 bits (284),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 88/133 (67%), Gaps = 6/133 (4%)

Query  8    DDTILTLPLFLEHVPAGFPSPAADYIEERINLNSEL--IRHPESTYLLRVEGSSMIDANI  65
             +  + LPL+  +VPAGF+SPA DYIE +++L+ EL  +R P+  YL ++ G SMI+A I
Sbjct  10   SEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLD-ELAEVRAPH-VYLAKILGDSMIGAGI  67

Query  66   FDGDVVIVDSAVTAAEGDIVIASF-DGEFTVKKL-QLSPVPMLIPMNPDYQPIVISSEQD  123
            FD D+++VD + TA +G+IV+A++ ++E   K+L  +  V  L + N+ Y +  I   ++
Sbjct  68   FDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDN  127

Query  124  LQIFGVVTYIIHR  136
            L I GVV Y ++R
Sbjct  128  LVIWGVVNYSMRR  140

110) umuD in NC_016112


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 79.7 bits (283),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 54/123 (44%), Positives = 83/123 (68%), Gaps = 1/123 (0%)

Query  17   TVNLPLFAGKVSAGFPSPADDYIEKTLDLNDLLVQKPAATFFVRAQGESMLGAGIHPNDI  76
             ++LPL++ +V+AGF+SPA DYIEK + L++L   +++  ++ +  G+SM+GAGI  +D+
Sbjct  13   GIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDL  72

Query  77   LVVDRSLEPVQGRIVICAL-NGELVVKRLKRQSGQWLLGSENPAYKDIVLREEMDTVIWG  135
            +VVDRS  + +G IV+ AL N+E + KRL    G   L SEN+AY    + E  + VIWG
Sbjct  73   IVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWG  132

Query  136  VVT  138
            VV 
Sbjct  133  VVN  135

111) Neut_2624 in NC_008342


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 79.7 bits (283),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 54/125 (44%), Positives = 85/125 (68%), Gaps = 2/125 (1%)

Query  11   IPLYS-GVRAGFPSPADDFLLKRIDLSDELIQHPEATFLMRIKGHSMAMAgiddgdivvv  69
            +PLYS  V AGF+SPA D++ K++ L +    ++   +L +I G+SM  AGI D D++VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  70   dRAVNPEHGKIVIACID-GEFTCKRLYMMDGITKLQAANPDYEDMVFKDGQTLEVWGVVT  128
            DR+  +EHG IV+A ++ +E  CKRL+MMDG+ KLQ+ N+ Y    + +G+ L +WGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  129  SCIKQ  133
              +++
Sbjct  136  YSMRR  140

112) ECENHK_09850 in NC_018405


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.9 bits (280),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 53/130 (41%), Positives = 86/130 (67%), Gaps = 2/130 (1%)

Query  9    SNQVIELPLFLERVACGFPSPAQDYVEDRLDLNRLAVRHPSATYFIKVSGDSMIGAGIGD  68
            S+  I LPL+  +V+ GF+SPA DY+E ++ L+ LA  +++  Y+ K+ GDSMIGAGI D
Sbjct  10   SEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFD  69

Query  69   GDLLVVDRSLNAEHGDIVVASVAGEFTV--KELQTRPVLRLLPHNARYQPITFQSEEELQ  126
             DL+VVDRS  AEHG+IVVA++     +  + +    V++L ++N+ Y +  +   ++L 
Sbjct  70   KDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLV  129

Query  127  IFGVVTHTLK  136
            I GVV  +++
Sbjct  130  IWGVVNYSMR  139

113) LLO_1987 in NC_013861


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 49/120 (41%), Positives = 83/120 (70%), Gaps = 1/120 (0%)

Query  42   RLPVFASKIQAGFPSPADDYIEGYLDLNSKFIKHPSSTFVLQATGDSMVDAGIFSGDWLL  101
            +LP+++ ++ AGF+SPA DYIE  + L+     +++  ++ +  GDSM++AGIF  D ++
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIV  74

Query  102  VDRSIEPSDGRIVIAAV-NGELTVKRLLNKGGKVQLLPANPKFKPIDITEGSEMVIWGVV  160
            VDRS  + +G IV+AA+ N+E   KRL+  +G V+L + N+ + + +I EG ++VIWGVV
Sbjct  75   VDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

114) umuD in NC_017445


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 84/123 (69%), Gaps = 2/123 (1%)

Query  18   FSERVPCGFPSPAQDYVEDRIDLNKLAIKHPSATYFIKVSGDSMREAGIGDGDLLIVDRS  77
            +S +VP GF+SPA DY+E ++ L+ LA  +++  Y+ K+ GDSM  AGI D DL++VDRS
Sbjct  19   YSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRS  78

Query  78   LNAVHGDIVVAAIAGEFTV-KEL-RTHPVLQLVPHNPHYPPISFQNAEELEIFGVVTFTL  135
              A HG+IVVAA+     + K L   + V++L ++N+ YP+  + ++++L I GVV +++
Sbjct  79   RTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSM  138

Query  136  KAH  138
            + H
Sbjct  139  RRH  141

115) umuD in NC_017390


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 84/123 (69%), Gaps = 2/123 (1%)

Query  18   FSERVPCGFPSPAQDYVEDRIDLNKLAIKHPSATYFIKVSGDSMREAGIGDGDLLIVDRS  77
            +S +VP GF+SPA DY+E ++ L+ LA  +++  Y+ K+ GDSM  AGI D DL++VDRS
Sbjct  19   YSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRS  78

Query  78   LNAVHGDIVVAAIAGEFTV-KEL-RTHPVLQLVPHNPHYPPISFQNAEELEIFGVVTFTL  135
              A HG+IVVAA+     + K L   + V++L ++N+ YP+  + ++++L I GVV +++
Sbjct  79   RTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSM  138

Query  136  KAH  138
            + H
Sbjct  139  RRH  141

116) umuD in NC_012214


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 51/123 (42%), Positives = 84/123 (69%), Gaps = 2/123 (1%)

Query  18   FSERVPCGFPSPAQDYVEDRIDLNKLAIKHPSATYFIKVSGDSMREAGIGDGDLLIVDRS  77
            +S +VP GF+SPA DY+E ++ L+ LA  +++  Y+ K+ GDSM  AGI D DL++VDRS
Sbjct  19   YSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRS  78

Query  78   LNAVHGDIVVAAIAGEFTV-KEL-RTHPVLQLVPHNPHYPPISFQNAEELEIFGVVTFTL  135
              A HG+IVVAA+     + K L   + V++L ++N+ YP+  + ++++L I GVV +++
Sbjct  79   RTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSM  138

Query  136  KAH  138
            + H
Sbjct  139  RRH  141

117) KPK_3299 in NC_011283


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 52/128 (41%), Positives = 87/128 (68%), Gaps = 2/128 (1%)

Query  13   LMLPLFSERVPCGFPSPAQDYVEDRLDLNKLLIKHPSATYFIKVSGESMRDAGISDGDLL  72
            + LPL+S +VP GF+SPA DY+E ++ L+ L   +++  Y+ K+ G+SM +AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDRSLSAVHGDIVIAAIAGEFTV-KEL-RTHPFLQLVPHNRDYASISFHNAEELEIFGV  130
            VVDRS +A HG+IV+AA+     + K L   +  ++L ++N  Y+S  + ++++L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VIFSIKAH  138
            V +S++ H
Sbjct  134  VNYSMRRH  141

118) Kvar_3165 in NC_013850


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 52/128 (41%), Positives = 87/128 (68%), Gaps = 2/128 (1%)

Query  13   LMLPLFSERVPCGFPSPAQDYVEDRLDLNKLLIKHPSATYFIKVSGESMRDAGISDGDLL  72
            + LPL+S +VP GF+SPA DY+E ++ L+ L   +++  Y+ K+ G+SM +AGI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   VVDRSLSAVHGDIVIAAIAGEFTV-KEL-RTHPFLQLVPHNRDYASISFHNAEELEIFGV  130
            VVDRS +A HG+IV+AA+     + K L   +  ++L ++N  Y+S  + ++++L I GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  VIFSIKAH  138
            V +S++ H
Sbjct  134  VNYSMRRH  141

119) Slit_0831 in NC_013959


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 77.3 bits (274),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 49/119 (42%), Positives = 82/119 (69%), Gaps = 3/119 (2%)

Query  42   VPAGFPSPADDYVERRLSLDEHLIQHRES-TFFMRVAGHSMRDLGIFDGDLLVVDRSVPA  100
            VPAGF+SPA DY+E+++SLDE L + R +  ++ ++ G+SM + GIFD DL+VVDRS  A
Sbjct  23   VPAGFASPAVDYIEKHVSLDE-LAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTA  81

Query  101  THGCVVVAVIDGEFTVKQLLYTAQGKV-LRAAHPDYPDIAITAEHDFSIWGVVQWNVHK  158
             HG +VVA ++    + + L+  +G V L++ ++ YP   I   +++ IWGVV+ ++++
Sbjct  82   EHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRR  140

120) amb2067 in NC_007626


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 76.8 bits (272),  Expect = 7e-16, Method: Compositional matrix adjust.
 Identities = 53/127 (42%), Positives = 82/127 (65%), Gaps = 1/127 (0%)

Query  30   PIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGIHSGDLLVVD  89
            P+YS  V+AGF+SPA D +E  + L+EL   R++  ++ +  GDSM GAGI   DL+VVD
Sbjct  17   PLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVD  76

Query  90   RSVQPHDGDIVVATLDGGLTV-KTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVTF  148
            RS  +++G+IVVA+L+ +  + K L   ++   L S N+ YPS  +  +D + IWGVV +
Sbjct  77   RSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNY  136

Query  149  SVSALAK  155
            S+   +K
Sbjct  137  SMRRHGK  143

121) Celly_1043 in NC_015167


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 76.0 bits (269),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 49/120 (41%), Positives = 85/120 (71%), Gaps = 5/120 (4%)

Query  27   ISAGFPSPADDFKENRISLDKEL--IKNPEATFFARVSGESMIGAGLEDNDLLVIDRSLE  84
            ++AGF+SPA D+ E+++SLD EL  ++ P+  ++A++ G+SMIGAG+ D+DL+V+DRS  
Sbjct  23   VPAGFASPAVDYIEKHVSLD-ELAEVRAPH-VYLAKILGDSMIGAGIFDKDLIVVDRSRT  80

Query  85   PAHNKIAVCYLDGEFTV-KRLKVENNLVWLQPENPNYKPIQITEENNFIIWGIVTNVIKK  143
            + H  I V  L+    + KRL + + +V LQ+EN+ Y + +I E +N++IWG+V   +++
Sbjct  81   AEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRR  140

122) umuD in NC_009840


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 75.7 bits (268),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 51/127 (41%), Positives = 87/127 (69%), Gaps = 1/127 (0%)

Query  11   FRIPLLNDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVKGDSMINAGIKDKDLI  70
            +++PL +  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSMI AGI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  71   IVDKSLIAKPGNIII-AMIDGEFTIKRLSIKNDELYLKAENNNYPDFRFKNHIDVQIWGV  129
            +VD+S  A  G+I++ A+ ++E   KRL + ++ + L++EN+ YP  ++ +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  130  VIYSIHR  136
            V YS++R
Sbjct  134  VNYSMRR  140

123) rumA in NC_020516


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 50/113 (45%), Positives = 76/113 (68%), Gaps = 1/113 (0%)

Query  31   PVAAGFPSPAADYEDRRLDVSEYLIRNPVSTFFFRVSGDSMVDAEIFDGDMLVVDRSVTP  90
             V+AGF+SPA DY ++++ + E     +   ++ ++ GDSM++A IFD D++VVDRS T+
Sbjct  22   QVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTA  81

Query  91   QHGHIVVAFL-RGERLVKRLEKRGERVVLCSANQAYPDFEVRSGDELAVWGVV  142
            +HG+IVVA L  +E + KRL   +  V L S N AYP  ++  GD+L +WGVV
Sbjct  82   EHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

124) umuD in NC_008816


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.7 bits (264),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 52/126 (42%), Positives = 85/126 (68%), Gaps = 1/126 (0%)

Query  11   FKIPLLTDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVKGDSMINAGIKDKDLI  70
            +K+PL +  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSMI AGI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  71   IVDKSLTARPGNIII-AMIDGEFTIKRLSIKNNELYLKAENHNYPDFRFKNHIDVQIWGV  129
            +VD+S TA  G+I++ A+ ++E   KRL + +  + L++EN  YP  ++ +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  130  VIYSIH  135
            V YS++
Sbjct  134  VNYSMR  139

125) PMT9312_0863 in NC_007577


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.7 bits (264),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 52/126 (42%), Positives = 86/126 (69%), Gaps = 1/126 (0%)

Query  11   FKIPLLNDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVRGDSMINAGIKDKDLI  70
            +K+PL +  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSMI AGI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  71   IVDKSLTAKPGNIII-AMIDGEFTIKRLSIKNDELYLKAENHNYPDFRFKNHIDVQIWGV  129
            +VD+S TA  G+I++ A+ ++E   KRL + ++ + L++EN  YP  ++ +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  130  VIYSIH  135
            V YS++
Sbjct  134  VNYSMR  139

126) MYO_21240 in NC_020296


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.4 bits (263),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 50/120 (42%), Positives = 80/120 (67%), Gaps = 1/120 (0%)

Query  20   LPLYACPVSAGFPSPAEDYLEGKLDLNQYLIKHPAATFFVRVTGDSMIGAGIHAGDILIV  79
            LPLY+  V+AGF+SPA DY+E  + L++    +++  ++ ++ GDSMIGAGI   D+++V
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  80   DRSLEPRDGKVVIAVV-NGELLVKRLRMEKQKIYLASENSDYPPLVITDLMDFEVWGVVT  138
            DRS  + +G +V+A + N+E + KRL M    + L SENS YP+  I +  ++ +WGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

127) sll5123 in NC_005229


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.4 bits (263),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 50/120 (42%), Positives = 80/120 (67%), Gaps = 1/120 (0%)

Query  20   LPLYACPVSAGFPSPAEDYLEGKLDLNQYLIKHPAATFFVRVTGDSMIGAGIHAGDILIV  79
            LPLY+  V+AGF+SPA DY+E  + L++    +++  ++ ++ GDSMIGAGI   D+++V
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  80   DRSLEPRDGKVVIAVV-NGELLVKRLRMEKQKIYLASENSDYPPLVITDLMDFEVWGVVT  138
            DRS  + +G +V+A + N+E + KRL M    + L SENS YP+  I +  ++ +WGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

128) umuD in NC_008817


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.4 bits (263),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 52/126 (42%), Positives = 84/126 (67%), Gaps = 1/126 (0%)

Query  16   VKIPLLSDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVKGDSMINSGIKDKDLI  75
            +K+PL S  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSMI +GI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  76   IVDKSLTAKPGNIII-AMIDGEFTIKRLSIRNNELYLKAENHNYPDFSFRNHVDIQIWGV  134
            +VD+S TA  G+I++ A+ ++E   KRL + +  + L++EN  YP   + +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  135  VIYSIH  140
            V YS++
Sbjct  134  VNYSMR  139

129) DND132_2624 in NC_016803


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 74.2 bits (262),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 80/121 (67%), Gaps = 1/121 (0%)

Query  27   LAVPLAGESVPAGFPSPAEEYLEKRLDLNEHLVTRPEATYFVRVSGDSMIGAGIHHGDLL  86
            + +PL +  VPAGF+SPA +Y+EK++ L+E    R+   Y+ ++ GDSMIGAGI + DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  87   VVDRSLDPRPGNVVI-ALVEGEFTVKRLRKSPLGLELAPENPEYVAILLSEETDFLIWGV  145
            VVDRS  +  G++V+ AL ++E   KRL      + L +EN+ Y +  + E  +++IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  146  V  146
            V
Sbjct  134  V  134

130) PMM0936 in NC_005072


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 73.6 bits (260),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 52/126 (42%), Positives = 84/126 (67%), Gaps = 1/126 (0%)

Query  1    MKIPLLSDSVSAGFPSPADDYAEENIDLNEHLISNPFSTFFLRVKGDSMINSGIKDKDLI  60
            +K+PL S  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSMI +GI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  61   IVDKSLTAKPGNIII-AMIDGEFTIKRLSIKNNELYLKAENHKYPDFSFRNHIDIQIWGV  119
            +VD+S TA  G+I++ A+ ++E   KRL + +  + L++EN  YP   + +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  120  VIYSIH  125
            V YS++
Sbjct  134  VNYSMR  139

131) rumA in NC_006824


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 73.6 bits (260),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 46/113 (41%), Positives = 77/113 (69%), Gaps = 1/113 (0%)

Query  38   PVSAGFPSPAEDYEDKKLDINDYLVRNPVSTFYFPVKGDSMQGAQVFDGDILVVDRSVMP  97
             V+AGF+SPA DY +K + +++     +   +   + GDSM GA +FD D++VVDRS  +
Sbjct  22   QVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTA  81

Query  98   AHGHVVI-AFVNGERLVKRFHRRGDRIALLAENPGYPPLELTEGSELVIWGVV  149
             HG++V+ A+ N+E + KR+   ++ + L +EN++YP+ ++ EG +LVIWGVV
Sbjct  82   EHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

132) umuD in NC_009091


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 73.1 bits (258),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 51/126 (41%), Positives = 85/126 (68%), Gaps = 1/126 (0%)

Query  11   FKIPLLTDSVSAGFPSPADDYEEENIDLNEHLISNPFSTFFLRVKGDSMVNAGIKDKDLI  70
            +K+PL +  V+AGF+SPA DY E ++ L+E     +   ++ ++ GDSM+ AGI DKDLI
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  71   IVDKSLTARPGNIII-AMIDGEFTIKRLSIKNNELYLKAENHNYPDFRFKNHIDVQIWGV  129
            +VD+S TA  G+I++ A+ ++E   KRL + +  + L++EN  YP  ++ +  ++ IWGV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  130  VIYSIH  135
            V YS++
Sbjct  134  VNYSMR  139

133) umuD in NC_020547


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 51/127 (41%), Positives = 83/127 (66%), Gaps = 6/127 (4%)

Query  40   YALEKISAGFPSPAQDYVDKALDMNEHLIKNETSTFIVKVASLSMLNAGIDIDDELI-VD  98
            Y+++ ++AGF+SPA DY++K + ++E         ++ K+ + SM+ AGI +D +LI VD
Sbjct  19   YSFQ-VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGI-FDKDLIVVD  76

Query  99   RSLDAKHGDIVV-ALVDNEFTVKRLMIDESGQWLKAENPEYKNIYLQEGQELIIWGVVTH  157
            RS  A HG+IVV AL ++E   KRL + ++   L++EN+ Y +  + EG++L+IWGVV  
Sbjct  77   RSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNY  136

Query  158  IIKMTRH  164
               M RH
Sbjct  137  --SMRRH  141

134) umuD in NC_014121


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 72.9 bits (257),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 50/124 (41%), Positives = 82/124 (67%), Gaps = 4/124 (3%)

Query  1    MPCGFPSPAQDYVEDSLDLNKLVIKHPSATYFVRVSGDSMIGAGISHGDLLVVDRSLTAV  60
            +P GF+SPA DY+E  + L+ L   +++  Y+ ++ GDSMIGAGI + DL+VVDRS TA 
Sbjct  23   VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAE  82

Query  61   HGDIVIAAVAGEFTV-KEL-QTHPRLQLIPHNPDYAPVFFAAEDELEIFGVVTFTLKANR  118
            HG+IV+AA+     + K L   +  ++L ++N+ Y++  +   D+L I GVV ++++  R
Sbjct  83   HGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMR--R  140

Query  119  HVRA  122
            H +A
Sbjct  141  HGKA  144

135) umuD in NC_015761


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 72.6 bits (256),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 57/128 (45%), Positives = 85/128 (67%), Gaps = 2/128 (1%)

Query  17   TFPLFSDLVPCGFPSPAQDYVETRIDLNELLVQHPSATYFVKSAGDSMlgagigdgdlli  76
             +PL+S  VP GF+SPA DY+E ++ L+EL   +++  Y+ K  GDSM+GAGI D DL++
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIV  74

Query  77   VDSARNPAHGDIVIAAVGGEFTV-KRL-QLHPVVMLKPENSAYTPIIIGSEDILDIFGVV  134
            VD +R + HG+IV+AA+     + KRL  ++ VV L++ENSAY +  I   D L I GVV
Sbjct  75   VDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

Query  135  TFIVKTAG  142
             + ++  G
Sbjct  135  NYSMRRHG  142

136) A464_1669 in NC_021870


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 72.6 bits (256),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 57/128 (45%), Positives = 85/128 (67%), Gaps = 2/128 (1%)

Query  14   TFPLFSDLVPCGFPSPAQDYVETRIDLNELLVQHPSATYFVKSAGDSMlgagigdgdlli  73
             +PL+S  VP GF+SPA DY+E ++ L+EL   +++  Y+ K  GDSM+GAGI D DL++
Sbjct  15   KLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIV  74

Query  74   VDSARNPAHGDIVIAAVGGEFTV-KRL-QLHPVVMLKPENSAYTPIIIGSEDILDIFGVV  131
            VD +R + HG+IV+AA+     + KRL  ++ VV L++ENSAY +  I   D L I GVV
Sbjct  75   VDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

Query  132  TFIVKTAG  139
             + ++  G
Sbjct  135  NYSMRRHG  142

137) umuD in NC_008820


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 50/124 (41%), Positives = 83/124 (67%), Gaps = 1/124 (0%)

Query  19   LPLASEHVAAGFPSPAEDYIEIGIDLNEQLIRHPASTFFLRVSGHSMTGVGIHNGDLLVV  78
            LPL S +V+AGF+SPA DYIE  + L+E    +++  ++ ++ G+SM G GI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  79   DRSLDARPGHIVVAILDGAFTL-KQLVRHRGVLRLEAAHSNYPPLDLARFGDVQIWGVAV  137
            DRS  A  G+IVVA L+ +  + K+L    GV++L++ +S YP+ ++   +++ IWGV  
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  138  HSIH  141
             S++
Sbjct  136  YSMR  139

138) Rhom172_2841 in NC_015970


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 71.8 bits (253),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/117 (41%), Positives = 77/117 (66%), Gaps = 1/117 (0%)

Query  26   VPAGFPSPADDYIEEALDLNELLIRHPAATFFMRVEGDSMIEAGIHSGDLLIVDRAIEPR  85
            VPAGF+SPA DYIE  + L+EL   +++  ++ ++ GDSMI AGI   DL++VDR+  + 
Sbjct  23   VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAE  82

Query  86   PGHVVVAAVCGELTV-KRLKLHEGRLCLMPEDGSHEPLPIREEMEVVIWGVVTCVIH  141
             G++VVAA+     + KRL + +G + L +E+++  +  I E  ++VIWGVV   ++
Sbjct  83   HGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMR  139

139) Maqu_4001 in NC_008739


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 71.3 bits (251),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 79/121 (66%), Gaps = 2/121 (1%)

Query  17   IAFFSDAVKAGFPSPAQDYIEKTLSLDDLCIRTPAATYFVRASGSSMERAGIHDGDVLVV  76
            ++++S  V AGF+SPA DYIEK +SLD+L    ++  Y+ +  G SM  AGI D D++VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  77   DRSLPPGHRKIVIASV-DGEFVCKRLDLSVPSRPVLRAESEDYPDITLREEDELEIFGVV  135
            DRS  + H  IV+A++ ++E +CKRL + + +   L++E+  YP   + E D+L I GVV
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRL-FMMDGVVKLQSENSAYPSKHILEGDNLVIWGVV  134

Query  136  T  136
             
Sbjct  135  N  135

140) BBIF_0763 in NC_014616


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 71.0 bits (250),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 53/120 (45%), Positives = 79/120 (66%), Gaps = 1/120 (0%)

Query  1    MPIVTEMVAAGFPSPALDGREEGFSLDAHVIEHPEYTFIVTVAGDSMEGAGIFHGDWLVV  60
            +P+ +  V+AGF+SPA+D  E   SLD     ++   ++  + GDSM GAGIF+ D +VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  61   DRSLTPEDGDVVVAVL-DGELTVKRLLSRDGRPMLHAENPRYPDFVPSEHGDVVIWGVVT  119
            DRS T+E+G++VVA L ++E   KRL+  DG   L++EN+ YP     E +++VIWGVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

141) BBPR_0732 in NC_014638


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 71.0 bits (250),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 52/113 (47%), Positives = 75/113 (67%), Gaps = 1/113 (0%)

Query  18   VAAGFPSPALDGREEGFSLDAHVIEHPEYTFIVTVAGDSMEGAGIFHGDWLVVDRSLTPE  77
            V+AGF+SPA+D  E   SLD     ++   ++  + GDSM GAGIF+ D +VVDRS T+E
Sbjct  23   VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAE  82

Query  78   DGDVVVAVL-DGELTVKRLLSRDGRPMLHAENPRYPDFVPSEHGDVVIWGVVT  129
            +G++VVA L ++E   KRL+  DG   L++EN+ YP     E +++VIWGVV 
Sbjct  83   HGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

142) PMT0635 in NC_005071


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 71.0 bits (250),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 50/124 (41%), Positives = 83/124 (67%), Gaps = 1/124 (0%)

Query  25   LPLASEHVAAGFPSPAEDYIEIGIDLNEQLIRHPASTFFLRVSGHSMTGVGIHNGDLLVV  84
            LPL S +V+AGF+SPA DYIE  + L+E    +++  ++ ++ G+SM G GI + DL+VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  85   DRSLDARPGHIVVAILDGAFTL-KQLVRHRGVLRLEAAHSNYPPLDLACFGDVQIWGVAV  143
            DRS  A  G+IVVA L+ +  + K+L    GV++L++ +S YP+ ++   +++ IWGV  
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  144  HSIH  147
             S++
Sbjct  136  YSMR  139

143) impA in NC_017999


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 70.0 bits (246),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 51/113 (46%), Positives = 74/113 (66%), Gaps = 1/113 (0%)

Query  32   VAAGFPSPALDGWEEGFSLDAHVIEHPEYTFIVTVAGDSMEGAGIFHGDWLVVDRSLTPE  91
            V+AGF+SPA+D  E   SLD     ++   ++  + GDSM GAGIF+ D +VVDRS T+E
Sbjct  23   VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAE  82

Query  92   DGDVVVAVLDGELTV-KRLLSRDGRPMLHAENPRYPDFVPSEHGDVVIWGVVT  143
            +G++VVA L+    + KRL+  DG   L++EN+ YP     E +++VIWGVV 
Sbjct  83   HGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

144) Msip34_1606 in NC_012969


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 68.9 bits (242),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 53/125 (43%), Positives = 81/125 (65%), Gaps = 5/125 (4%)

Query  27   MPLYDNPVAAGFPSPAADHVEDRLSADDYLVGNPTATYFVRVKGDSMIDAGIFDGDVLVV  86
            +PLY   V+AGF+SPA D +E ++S D+     +   Y+ ++ GDSMI+AGIFD D++VV
Sbjct  16   LPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVV  75

Query  87   DRSITPSIGHVVLAEL-DGEFTVKYL----GRGQLLPANPAYQPIKFKDGQTVEIVGVVT  141
            DRS T+  G++V+A L ++E   K L    G  +L + N+AY +  + +G+ + I GVV 
Sbjct  76   DRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVN  135

Query  142  GSMRR  146
             SMRR
Sbjct  136  YSMRR  140

145) SAR116_1469 in NC_014010


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 68.7 bits (241),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 50/117 (43%), Positives = 75/117 (65%), Gaps = 3/117 (2%)

Query  13   VSAGFPSPAEDYIDSTLDLNAHLIENPAATFFLRVAGDSMTGAGIHSGDLLMVDRSLTPK  72
            V+AGF+SPA DYI+  + L+      ++  ++ ++ GDSM GAGI   DL++VDRS T+ 
Sbjct  23   VPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAE  82

Query  73   INDIVIATIHNEFTV-KRLGQHKEGWFLQSENPDYPCLEIPEDSH--IWGVVTYSIR  126
              +IV+A+++N   + KRL        LQSEN+ YP  +I E+ +  IWGVV YS+R
Sbjct  83   HGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMR  139

146) H650_06735 in NC_021500


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 65.2 bits (228),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 57/139 (42%), Positives = 94/139 (68%), Gaps = 2/139 (1%)

Query  19   MQFIKPADFPRAVVALPLFSDLVQCGFPSPAADYVEQRIDLNELLVQRPSATYFVKAAgd  78
            M  +  + ++ + + LPL+S  V  GF+SPA DY+E+++ L+EL   R++  Y+ K  GD
Sbjct  1    MSVVILGPLSEGGIKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGD  60

Query  79   smidggisdgdllvvdSSRTAQHGDIVIAAVDGEFTV-KRL-QLRPTIQLNPMNSAYSPI  136
            SMI++GI D DL+VVD SRTA+HG+IV+AA++    + KRL  +   ++L++ NSAY++ 
Sbjct  61   SMIGAGIFDKDLIVVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSK  120

Query  137  RVTSEDTLDIFGVVTFIVK  155
            ++   D L I GVV + ++
Sbjct  121  HILEGDNLVIWGVVNYSMR  139

147) Sbal175_1831 in NC_017571


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 60.0 bits (208),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 49/118 (42%), Positives = 75/118 (64%), Gaps = 5/118 (4%)

Query  13   TGFESPAAEYGQLGLSLDELLVVHPSATFIGIAKGDSMQGVGIFYGDLLIVDRQETARHG  72
            +GF SPA +Y +  +SLDEL  V+++  +++   GDSM G GIF  DL++VDR  TA HG
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVANF-NGEFVCK---ILDKTHRMLLSSNEQHQPQPIHDYDNFTIEGVVIRSIRCH  126
            +++VA + N+E +CK   ++D   + L S N    ++ I + DN+ I GVV  S+R H
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVK-LQSENSAYPSKHILEGDNLVIWGVVNYSMRRH  141

148) Shew185_4269 in NC_009665


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 59.7 bits (207),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 74/117 (64%), Gaps = 3/117 (2%)

Query  13   TGFESPAAEYGQLGLSLDELLVVHPSATFIGIAKGDSMQGVGIFYGDLLIVDRQETARHG  72
            +GF SPA +Y +  +SLDEL  V+++  +++   GDSM G GIF  DL++VDR  TA HG
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVANF-NGEFVCKILDKKHRM--LLSSNEQHQPQPIHDYDNFTIEGVVIRSIRCH  126
            +++VA + N+E +CK L   + +  L S N    ++ I + DN+ I GVV  S+R H
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRH  141

149) Sbal195_4408 in NC_009997


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 59.7 bits (207),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 74/117 (64%), Gaps = 3/117 (2%)

Query  13   TGFESPAAEYGQLGLSLDELLVVHPSATFIGIAKGDSMQGVGIFYGDLLIVDRQETARHG  72
            +GF SPA +Y +  +SLDEL  V+++  +++   GDSM G GIF  DL++VDR  TA HG
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVANF-NGEFVCKILDKKHRM--LLSSNEQHQPQPIHDYDNFTIEGVVIRSIRCH  126
            +++VA + N+E +CK L   + +  L S N    ++ I + DN+ I GVV  S+R H
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRH  141

150) Sbal678_4437 in NC_016901


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 59.7 bits (207),  Expect = 9e-11, Method: Compositional matrix adjust.
 Identities = 49/117 (42%), Positives = 74/117 (64%), Gaps = 3/117 (2%)

Query  13   TGFESPAAEYGQLGLSLDELLVVHPSATFIGIAKGDSMQGVGIFYGDLLIVDRQETARHG  72
            +GF SPA +Y +  +SLDEL  V+++  +++   GDSM G GIF  DL++VDR  TA HG
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVANF-NGEFVCKILDKKHRM--LLSSNEQHQPQPIHDYDNFTIEGVVIRSIRCH  126
            +++VA + N+E +CK L   + +  L S N    ++ I + DN+ I GVV  S+R H
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGVVNYSMRRH  141

151) Sbal117_3695 in NC_017579


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 57.4 bits (198),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 76/121 (63%), Gaps = 5/121 (4%)

Query  13   TGFESPAAEYTQLGLSLDELLINHPSSTFLAFAEGDSMQGKGIFDGDILIIDRHETARYG  72
            +GF SPA +Y +  +SLDEL   +++  +LA   GDSM G GIFD D++++DR  TA  G
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVASLNR-EFICK---IIDIPRRLLLSSNPQHQPVIIHEYDEFSIEGVITRSIRCHRK  128
            +++VA+LN  E ICK   ++D   + L S N+   +  I E D++ I GV+  S+R H K
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVK-LQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

Query  129  S  129
            +
Sbjct  144  A  144

152) Sbal_3554 in NC_009052


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 57.4 bits (198),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 76/121 (63%), Gaps = 5/121 (4%)

Query  13   TGFESPAAEYTQLGLSLDELLINHPSSTFLAFAEGDSMQGKGIFDGDILIIDRHETARYG  72
            +GF SPA +Y +  +SLDEL   +++  +LA   GDSM G GIFD D++++DR  TA  G
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DVIVASLNR-EFICK---IIDIPRRLLLSSNPQHQPVIIHEYDEFSIEGVITRSIRCHRK  128
            +++VA+LN  E ICK   ++D   + L S N+   +  I E D++ I GV+  S+R H K
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVK-LQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

Query  129  S  129
            +
Sbjct  144  A  144

153) Shal_2184 in NC_010334


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 55.5 bits (191),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 73/121 (61%), Gaps = 5/121 (4%)

Query  13   TGFESPATDYRQLPLSLDELLIEHPSSTFIGLANGDSMEGVGIFDGDILIVDRHVDVRNQ  72
            +GF SPA DY +  +SLDEL   +++  +++   GDSM G GIFD D+++VDR     + 
Sbjct  25   AGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHG  84

Query  73   DIIVANYNGS-FVCK---IIDKVNRLLLSANEAHMSTPILEHDTFSVEGVVIRSIRCNRK  128
            +I+VA  N S  +CK   ++D V + L S N A  S  ILE D + + GVV  S+R + K
Sbjct  85   EIVVAALNNSEPICKRLFMMDGVVK-LQSENSAYPSKHILEGDNLVIWGVVNYSMRRHGK  143

Query  129  S  129
            +
Sbjct  144  A  144

154) umuD in NC_017631


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

155) umuD in NC_008563


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

156) umuD in NC_004431


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

157) umuD in NC_017652


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

158) umuD in NC_017651


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

159) umuD in NC_017628


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

160) umuD in NC_011993


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

161) NRG857_06040 in NC_017634


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

162) umuD in NC_022370


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

163) umuD in NC_011742


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

164) UM146_11170 in NC_017632


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

165) umuD in NC_007946


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.7 bits (188),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLTPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

166) umuD in NC_013364


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.5 bits (187),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSSITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY+S  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

167) umuD in NC_011601


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.5 bits (187),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 82/121 (68%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIIIAAVDDEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+I++AA+++   + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

168) umuD in NC_011750


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.2 bits (186),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYIEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DYIE+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

169) umuD in NC_017646


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.2 bits (186),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYIEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DYIE+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

170) umuD in NC_010498


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.2 bits (186),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 51/121 (43%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYIEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DYIE+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

171) umuD in NC_017626


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

172) ECP_1226 in NC_008253


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

173) umuD in NC_011748


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

174) APECO78_09780 in NC_020163


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

175) EcolC_2442 in NC_010468


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

176) umuD in NC_012971


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

177) umuD in NC_012892


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

178) ECBD_2439 in NC_012947


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

179) umuD in NC_012967


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

180) umuD in NC_012759


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

181) EcDH1_2465 in NC_017625


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

182) umuD in NC_017638


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

183) umuD in NC_009801


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

184) ETEC_1287 in NC_017633


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

185) umuD in NC_009800


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

186) umuD in NC_011741


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

187) umuD in NC_010473


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

188) umuD in NC_020518


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

189) umuD in NC_000913


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

190) umuD in NC_007779


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

191) umuD in NC_017660


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

192) EKO11_2673 in NC_016902


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

193) LY180_06010 in NC_022364


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

194) umuD in NC_013353


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

195) O3M_14720 in NC_018650


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

196) O3O_10875 in NC_018661


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

197) O3K_14745 in NC_018658


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

198) umuD in NC_011353


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

199) umuD in NC_002655


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

200) ECs1678 in NC_002695


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

201) umuD in NC_013008


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

202) umuD in NC_013361


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

203) umuD in NC_013941


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

204) ECO55CA74_07035 in NC_017656


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

205) umuD in NC_017663


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

206) ECSE_1231 in NC_011415


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

207) umuD in NC_011751


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

208) UMNK88_1496 in NC_017641


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

209) umuD in NC_017635


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

210) umuD in NC_017664


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

211) CDCO157_1608 in NC_017906


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

212) umuD in NC_010658


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

213) umuD in NC_007613


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

214) umuD in NC_017328


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

215) umuD in NC_004741


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

216) umuD in NC_004337


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

217) umuD in NC_008258


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

218) SSON53_06290 in NC_016822


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

219) umuD in NC_007384


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

220) ambt_16835 in NC_015554


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 54.0 bits (185),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 48/119 (41%), Positives = 77/119 (65%), Gaps = 5/119 (4%)

Query  14   GFESPAVEYVelelsldellIDHKSATFIGFAQGESMMGDGIFDGDLLIVSRAEEVSHMT  73
            GF SPAV+Y+E ++SLDEL   + +  +++   G+SM+G GIFD DL++V R+    H  
Sbjct  26   GFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLIVVDRSRTAEHGE  85

Query  74   VIVASL-NGEFICKRL---DKHQRQLLSSAENATPHVLGEDDDFRVEGVVIRSIRLHKK  128
            ++VA+L N+E ICKRL   D   +    ++  ++ H+L E+D++ + GVV  S+R H K
Sbjct  86   IVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHIL-EGDNLVIWGVVNYSMRRHGK  143

221) umuD in NC_011745


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 53.7 bits (184),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIIIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+I++AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

222) umuD in NC_017644


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 53.7 bits (184),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIIIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+I++AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

223) ECSF_1128 in NC_013654


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 53.7 bits (184),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIIIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+I++AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134

224) umuD in NC_007606


> AJ870974|101|G97|68637933|CAI36138.1|Pseudomonas_syringae_pv._phaseolicola_1302A|-|101808..102242|rulA|-|SOS-response 
transcriptional 
repressor
Length=144

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 50/121 (42%), Positives = 81/121 (67%), Gaps = 2/121 (1%)

Query  13   LTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAsgdsmidggisdgdll  72
            + +PL+S  V  GF+SPA DY+E+++ L++L   +++  Y+ K  GDSMI++GI D DL+
Sbjct  14   IKLPLYSFQVPAGFASPAVDYIEKHVSLDELAEVRAPHVYLAKILGDSMIGAGIFDKDLI  73

Query  73   iVDSAITASHGDIVIAAVDGEFTV-KKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGV  130
            +VD + TA HG+IV+AA++    + K+L  +   V+L + NSAY++  I   D L + GV
Sbjct  74   VVDRSRTAEHGEIVVAALNNSEPICKRLFMMDGVVKLQSENSAYPSKHILEGDNLVIWGV  133

Query  131  V  131
            V
Sbjct  134  V  134