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Homologs of VC0395_A0343 gene of NC_009457_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECL_00772
( YP_003611285.1 )

putative IS903 transposase

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-15

2) AHML_05695
( YP_008042270.1 )

putative transposase

NC_021290
(Aeromonas hydrophila ML09-119)

2e-11

3) Shewana3_4283
( YP_863798.1 )

transposase

NC_008573
(Shewanella sp. ANA-3)

2e-08

4) OA238_118p0990
( YP_007702253.1 )

putative transposase

NC_020909
(Octadecabacter arcticus 238)

3e-04

• Sequence Alignments

1) O3Y_03805 in NC_016944


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60
           MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  VKRVFSMQFRAL  72
           VKRVFSMQFRAL
Sbjct  61  VKRVFSMQFRAL  72

2) Vch1786_I0325 in NC_016445


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60
           MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  VKRVFSMQFRAL  72
           VKRVFSMQFRAL
Sbjct  61  VKRVFSMQFRAL  72

3) VC0395_A0343 in NC_009457


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60
           MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  VKRVFSMQFRAL  72
           VKRVFSMQFRAL
Sbjct  61  VKRVFSMQFRAL  72

4) VIBHAR_05983 in NC_009784


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 62/72 (87%), Positives = 68/72 (95%), Gaps = 0/72 (0%)

Query  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEETIAEWKQSRQGKRGRPRRFSDLAITTALM  60
           MPKPRYKTTNWKQYNKALINRGSLTFWIDEE+  +WKQS+Q+KRGRPR+FSDLAI TALM
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  VKRVFSMPLRAL  72
           VKRVFSM +RAL
Sbjct  61  VKRVFSMQFRAL  72

5) VV2_0421 in NC_004460


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 97.8 bits (352),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 56/66 (85%), Positives = 61/66 (93%), Gaps = 0/66 (0%)

Query  1   MPKPRYKTTNWKQYNKALINRGSLIFWIDEEAIREWKQSKQKKRGRPRFFSDLAITTALM  60
           MPKPRYKTTNWKQYNKALINRGSL FWIDEEA R+WKQSKQ KRGRPR FSDLAI TALM
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  MKHLFN  66
           +K++F+
Sbjct  61  VKRVFS  66

6) VV0151 in NC_005139


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 52/61 (86%), Positives = 55/61 (91%), Gaps = 0/61 (0%)

Query  1   MPKLHYKTTNWKQYNKALINHGSLTFWIDEEAIRQWKQSKQDKRGRPRQFSDLADISRRM  60
           MPK +YKTTNWKQYNKALIN+GSLTFWIDEEA RQWKQSKQDKRGRPRQFSDLA I+  M
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM  60

Query  61  C  61
            
Sbjct  61  V  61

7) ECL_00772 in NC_014121


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 76.0 bits (269),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 39/72 (55%), Positives = 55/72 (77%), Gaps = 1/72 (1%)

Query  16  VAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVL  75
           ++K ++K TNW  YNKALINRGS+TFW+D+EA + W   +    RGRP+++SDLAI T L
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQW-KQSKQDKRGRPRQFSDLAIITAL  59

Query  76  VIKRVFRLTLRA  87
           ++KRVF + +RA
Sbjct  60  MVKRVFSMQFRA  71

8) AHML_05695 in NC_021290


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 62.4 bits (217),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 32/72 (45%), Positives = 51/72 (71%), Gaps = 1/72 (1%)

Query  1   MGTSLYPITNWPKYNKSLINCGSLTFWVDTEAMYNWFHHDHHGHWGRSQLYTDQTICTFL  60
           M  + Y  TNW +YNK+LIN GSLTFW+D EA  +W  +  ++ +GR++ ++D +I T L
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQW-KQSKQDKRGRPRQFSDLAIITAL  59

Query  61  MLKGIFNLTLRA  72
           M+K +F++ +RA
Sbjct  60  MVKRVFSMQFRA  71

9) Shewana3_4283 in NC_008573


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 52.6 bits (180),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 31/56 (56%), Positives = 41/56 (74%), Gaps = 1/56 (1%)

Query  1   MGKSKSRITNWPEYNKALTNRGSLTFWIDEQALNLWCHTEHHGGRGRGFQYSDTAI  56
           M K++ + TNW +YNKAL NRGSLTFWIDE+A   W ++  ++ RGR  Q+SD AI
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQS-KQDKRGRPRQFSDLAI  55

10) OA238_118p0990 in NC_020909


> NC_009457_P1|10|G10|147673753|YP_001216299.1|Vibrio_cholerae_O395|-|11425..11643|-|VC0395_A0343|transposase
Length=72

 Score = 38.7 bits (127),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 24/55 (44%), Positives = 36/55 (66%), Gaps = 0/55 (0%)

Query  13  IPKQKQRVTNWAEYNEGLRWRGDLTVWISEDAIGLWSaarrttrggqrrYSNLAI  67
           +PK + + TNW +YN +L  RG LT WI E+A   W  +++  RG  R++S+LAI
Sbjct  1   MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAI  55