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Homologs of CPR_0656 gene of NC_008262_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) CPR_0656
( YP_697983.1 )

bacteriocin ABC transporter putative

NC_008262
(Clostridium perfringens SM101)

1e-160

100

2) Clocel_1428
( YP_003842945.1 )

biotin/lipoyl attachment domain-containing protein

NC_014393
(Clostridium cellulovorans 743B)

7e-103

3) Clocel_0742
( YP_003842277.1 )

secretion protein HlyD family protein

NC_014393
(Clostridium cellulovorans 743B)

3e-98

4) ELI_3558
( YP_003961480.1 )

bacteriocin ABC transporter

NC_014624
(Eubacterium limosum KIST612)

7e-58

• Sequence Alignments

1) CPR_0656 in NC_008262


> NC_008262_P4|10|G10|110801526|YP_697983.1|Clostridium_perfringens_SM101|-|4784..5896|-|CPR_0656|bacteriocin 
ABC transporter 
putative
Length=370

 Score =  559 bits (2110),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 370/370 (100%), Positives = 370/370 (100%), Gaps = 0/370 (0%)

Query  1    MKIYSINELTHSKILYDKNPPKFMMYiiiivlallvafivWSTKSVKTYIIKGQGIVTTD  60
            MKIYSINELTHSKILYDKNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTD
Sbjct  1    MKIYSINELTHSKILYDKNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTD  60

Query  61   TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD  120
            TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD
Sbjct  61   TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD  120

Query  121  RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKRKEFIVDKEEAKKQGATDEQIEKYEKS  180
            RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKRKEFIVDKEEAKKQGATDEQIEKYEKS
Sbjct  121  RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKRKEFIVDKEEAKKQGATDEQIEKYEKS  180

Query  181  QKNKDDVTRYEGILQFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKLHLNVPL  240
            QKNKDDVTRYEGILQFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKLHLNVPL
Sbjct  181  QKNKDDVTRYEGILQFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKLHLNVPL  240

Query  241  NKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEGQ  300
            NKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEGQ
Sbjct  241  NKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEGQ  300

Query  301  VSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMKY  360
            VSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMKY
Sbjct  301  VSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMKY  360

Query  361  FLDQLGIKIN  370
            FLDQLGIKIN
Sbjct  361  FLDQLGIKIN  370

2) Clocel_1428 in NC_014393


> NC_008262_P4|10|G10|110801526|YP_697983.1|Clostridium_perfringens_SM101|-|4784..5896|-|CPR_0656|bacteriocin 
ABC transporter 
putative
Length=370

 Score =  367 bits (1379),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 195/369 (53%), Positives = 302/369 (82%), Gaps = 2/369 (0%)

Query  2    LNVYKLNEITDSKIQYDKKPPRFMYYIILVMLMLVVSFFIWSTKSIKTYIVTGNGIVTTE  61
            +++Y +NE+T+SKI YDK+PP+FM YII+++L L+V+F++WSTKS+KTYI+ G+GIVTT+
Sbjct  1    MKIYSINELTHSKILYDKNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTD  60

Query  62   NKSNITAKVSGEVKEVYIQEGKEVKAGDILIVFNSPEPKYQIEQVENQVEFLNKRIDLLK  121
             KSN+ +K+SGE+ +V+I+EGK+V+ GD LI +N+ E++ Q+ Q++ Q++ +N+RI LL 
Sbjct  61   TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD  120

Query  122  RAENEANKGTNTFDKNNIDELEFYNRLLGSNAKLEEYKVDEEALRKQGYKEAEIKQFYDK  181
            RAE++A +G NTF+KNN DE+EFYN+L   N+K  E+ VD E  +KQG  + +I + Y+K
Sbjct  121  RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKRKEFIVDKEEAKKQGATDEQIEK-YEK  179

Query  182  AQIKKNQIY-YDTILSFTNERNQLEMEKDKLETQKKAIANSMNEYIIYAVSDGKIHLNSE  240
            +Q +K+++  Y+ IL FTNE++QLE EK KLE+QKK++ ++ +E+ I A   GK+HLN  
Sbjct  180  SQKNKDDVTRYEGILQFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKLHLNVP  239

Query  241  IKKGMVLQSGSQIGSIAKVDGELTVEALISGSDRPRVQENDEVSLAIDGLNQAEYRTLNG  300
            ++KGMVLQ+GS IG++++ +  + +E+LI++++RPR++  DEVSLA+ GL+Q+EY T++G
Sbjct  240  LNKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEG  299

Query  301  NIESIDEDATIDNQKGKIYFKVKIRPDNNYIEDKNGDKVKLKLGMVTEVRVKYEKITYMK  360
            ++ SIDEDATIDN+KG+++FK+KI P++ Y+ D +G+KV+L LGM+TE RVKYEKITYMK
Sbjct  300  QVSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMK  359

Query  361  YFMEQIGIK  369
            YF++Q+GIK
Sbjct  360  YFLDQLGIK  368

3) Clocel_0742 in NC_014393


> NC_008262_P4|10|G10|110801526|YP_697983.1|Clostridium_perfringens_SM101|-|4784..5896|-|CPR_0656|bacteriocin 
ABC transporter 
putative
Length=370

 Score =  351 bits (1320),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 220/370 (60%), Positives = 311/370 (85%), Gaps = 0/370 (0%)

Query  1    MKVYSLNEITDSKVLYDKKPPRFMvyiifivlflivgflfWSTKSIKTYVVKGQGIVTTA  60
            MK+YS+NE+T+SK+LYDK+PP+FM+YII+IVL L+V+F+ WSTKS+KTY++KGQGIVTT 
Sbjct  1    MKIYSINELTHSKILYDKNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTD  60

Query  61   NKAFIMSKIQgevkevfveegkQINEGDVILTINSVQSNLQLEQVNGQVQVLDRRINLLK  120
             K+ +M+K+ GE+ +VF+EEGK++NEGD ++++N+++SNLQL Q+++Q+QV++ RI LL 
Sbjct  61   TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD  120

Query  121  RAEEEATHWKNTFDKDNPEEVEFYNKLVNSYIKANEYKVDEAALKKQNYTDDQIKQYKEQ  180
            RAE +AT+ +NTF+K+N++EVEFYNKL N   K +E+ VD    KKQ  TD+QI +Y   
Sbjct  121  RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKRKEFIVDKEEAKKQGATDEQIEKYEKS  180

Query  181  AANKADQIYYDTILSFTTEKNQLELEKSKLQTQGDALQKSGEEYKLLASKSGVVHLNSQI  240
              NK D   Y+ IL FT EK+QLE+EKSKL++Q  +L+ ++EE+K++A+KSG +HLN  +
Sbjct  181  QKNKDDVTRYEGILQFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKLHLNVPL  240

Query  241  NKGLVLQAGTLLGSITNADEELVVEIMLPSSERPRIHNDDEVSIAVSGLNQAEYGTIPGK  300
            NKG+VLQAG+L+G++TN +E +++E ++PS+ERPRIH +DEVS+AV GL+Q+EYGTI G+
Sbjct  241  NKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEGQ  300

Query  301  VLSIDKDATINNEKGEVYFKVKVKPDITTLKDKKGEEVNLTLGMLTETRVKYEKITYMKY  360
            V SID DATI+NEKG+V+FK+K+ P+ T L D KGE VNLTLGMLTETRVKYEKITYMKY
Sbjct  301  VSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMKY  360

Query  361  FLEQIGVKFS  370
            FL+Q+G+K++
Sbjct  361  FLDQLGIKIN  370

4) ELI_3558 in NC_014624


> NC_008262_P4|10|G10|110801526|YP_697983.1|Clostridium_perfringens_SM101|-|4784..5896|-|CPR_0656|bacteriocin 
ABC transporter 
putative
Length=370

 Score =  217 bits (809),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 160/375 (43%), Positives = 262/375 (70%), Gaps = 8/375 (2%)

Query  1    MKIYHYSDLKDSRIMYDRNppvlfpiivllvlvlvivliflSIRTDKTYVVKGQGMVQSN  60
            MKIY  ++L +S+I+YD+NPP +   I+++VL L++ +I  S ++ KTY++KGQG+V ++
Sbjct  1    MKIYSINELTHSKILYDKNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTD  60

Query  61   ELRYIMSEFSGEIMNCAIEENKEVQTGEILGVVNSPDLALQKQQIEGQIAITDNRIQLLS  120
                +M+  SGEI +  IEE K+V+ G+ L  +N+ +  LQ  QI++QI + +NRI LL 
Sbjct  61   TKSNVMTKMSGEITDVFIEEGKDVNEGDTLISLNPLESNLQLGQIQAQIQVINNRITLLD  120

Query  121  RLESNLKYGTNTFDPNDSVEAEFYNRIAVMDSSQAEQQLSIDQINDELMKKQGMTDEQIQ  180
            R E +   G NTF+ N+S E EFYN++A +++ +  +++ +D+ +    KKQG TDEQI+
Sbjct  121  RAEKDATNGRNTFNKNNSDEVEFYNKLANLNTKR--KEFIVDKEEA---KKQGATDEQIE  175

Query  181  QYKDTYLNKQQQI-FDQTLAEATKEKAQYQAERDKLQVQSDTLETGKNEYTITAPITGVL  239
            +Y  +  NK++   ++  L + T+EK Q + E+ KL+ Q  +LE + +E+ I AP +G L
Sbjct  176  KYEKSQKNKDDVTRYEGIL-QFTNEKKQLEFEKSKLEAQKKSLEEAAEEFKIVAPKSGKL  234

Query  240  HTTIPVADGMVIQAGSAIATLSGKDN-LYFETsisssdrskidigdPVEIAVNGLLETEF  298
            H  +P+  GMV+QAGS I+TL+ K++ + +E+ I+S++R++I+IGD V +AV GL ++E+
Sbjct  235  HLNVPLNKGMVLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEY  294

Query  299  GTLKGKVTDIDADATIQEKDGNIYFKAKVQPDANCLFDKKNQPVYLTSGMTAEVRVKYDK  358
            GT+ G+V+ ID DATI++  GN++FK K++P+   L D K + V LT GM +E RVKY+K
Sbjct  295  GTIEGQVSSIDEDATIDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEK  354

Query  359  ISYYNYFLDALGIRV  373
            I+Y +YFLD LGI++
Sbjct  355  ITYMKYFLDQLGIKI  369