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Homologs of XC_3010 gene of NC_007086_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpB2
( YP_005636501.1 )

type III secretion protein HrpB2

NC_017271
(Xanthomonas campestris 756C)

4e-56

100

2) XC_3010
( YP_244078.1 )

HrpB2 protein

NC_007086
(Xanthomonas campestris 8004)

4e-56

100

3) hrpB2
( NP_636606.1 )

HrpB2 protein

NC_003902
(Xanthomonas campestris ATCC 33913)

4e-56

100

4) xccb100_3073
( YP_001904478.1 )

HrpB2 protein

NC_010688
(Xanthomonas campestris B100)

4e-56

100

5) hrpB2
( NP_640763.1 )

HrpB2 protein

NC_003919
(Xanthomonas axonopodis 306)

1e-42

6) XAC29_02090
( YP_007634911.1 )

HrpB2 protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

1e-42

7) hrpB2
( YP_007648833.1 )

HrpB2 protein

NC_020815
(Xanthomonas citri Aw12879)

1e-42

8) hrpB2
( YP_198726.1 )

protein HrpB2

NC_006834
(Xanthomonas oryzae KACC10331)

1e-39

9) XOO_0089
( YP_449118.1 )

HrpB2 protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

1e-39

10) PXO_03400
( YP_001911280.1 )

type III hypothetical protein HrpB2

NC_010717
(Xanthomonas oryzae PXO99A)

1e-39

11) hrpB2
( YP_004850005.1 )

HrpB2 protein

NC_016010
(Xanthomonas axonopodis F1)

9e-40

12) hrpB2
( YP_362159.1 )

HrpB2 protein

NC_007508
(Xanthomonas campestris 85-10)

9e-40

13) hrpB2
( YP_005630674.1 )

type III secretion protein HrpB2

NC_017267
(Xanthomonas oryzae BLS256)

5e-27

• Sequence Alignments

1) XC_3010 in NC_007086


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  211 bits (784),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60
            MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120
            MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLFKNQ  130
            NAVQTLFKNQ
Sbjct  121  NAVQTLFKNQ  130

2) hrpB2 in NC_003902


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  211 bits (784),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60
            MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120
            MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLFKNQ  130
            NAVQTLFKNQ
Sbjct  121  NAVQTLFKNQ  130

3) hrpB2 in NC_017271


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  211 bits (784),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60
            MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120
            MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLFKNQ  130
            NAVQTLFKNQ
Sbjct  121  NAVQTLFKNQ  130

4) xccb100_3073 in NC_010688


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  211 bits (784),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)

Query  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60
            MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120
            MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLFKNQ  130
            NAVQTLFKNQ
Sbjct  121  NAVQTLFKNQ  130

5) hrpB2 in NC_003919


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 94/130 (73%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVQAIAGTSITSTQALSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGNPSMMSR  60
            M+LIPPV +I++++  ST A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG+PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

6) XAC29_02090 in NC_020800


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 94/130 (73%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVQAIAGTSITSTQALSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGNPSMMSR  60
            M+LIPPV +I++++  ST A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG+PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

7) hrpB2 in NC_020815


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  165 bits (611),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 94/130 (73%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVQAIAGTSITSTQALSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGNPSMMSR  60
            M+LIPPV +I++++  ST A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG+PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

8) hrpB2 in NC_006834


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  156 bits (574),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 93/130 (72%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  2    MTLIPPVqaiagtsaaatqaLSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGSPSMMSR  61
            M+LIPPV +I+++++ +T A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  62   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  121
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  122  NAVQTLVKNQ  131
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

9) XOO_0089 in NC_007705


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 93/130 (72%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVqaiagtsaaatqaLSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGSPSMMSR  60
            M+LIPPV +I+++++ +T A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

10) PXO_03400 in NC_010717


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 93/130 (72%), Positives = 121/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVqaiagtsaaatqaLSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGSPSMMSR  60
            M+LIPPV +I+++++ +T A+SP AAPNQ+LVNRFQALMQSS PLPPAMQRVG PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

11) hrpB2 in NC_016010


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  156 bits (576),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 92/130 (71%), Positives = 122/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVqaiagtsaaatqaLSPVATPNQALVNRFQALMQSSSPLPPAMQRVGNPSMMSR  60
            M+LIPPV +I+++++ +T A+SP A+PNQ+LVNRFQALMQSS PLPPAMQRVG+PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

12) hrpB2 in NC_007508


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  156 bits (576),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 92/130 (71%), Positives = 122/130 (94%), Gaps = 0/130 (0%)

Query  1    MTLIPPVqaiagtsaaatqaLSPVATPNQALVNRFQALMQSSSPLPPAMQRVGNPSMMSR  60
            M+LIPPV +I+++++ +T A+SP A+PNQ+LVNRFQALMQSS PLPPAMQRVG+PSM+SR
Sbjct  1    MALIPPVVPITASTGLSTPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISR  60

Query  61   VVDVQNDGVRTIAEHIDAFSMQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGK  120
            +VD+QNDGVR+++EH+DAF+ +AP MGL+E+AA+++KL++ELTMVGFNLNVSV++AQSGK
Sbjct  61   MVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMKLINELTMVGFNLNVSVSLAQSGK  120

Query  121  NAVQTLVKNQ  130
            NAVQTL KNQ
Sbjct  121  NAVQTLFKNQ  130

13) hrpB2 in NC_017267


> NC_007086_P1|10|G10|66769316|YP_244078.1|Xanthomonas_campestris_pv._campestris_str._8004|-|8127..8519|-|XC_3010|HrpB2 
protein
Length=130

 Score =  114 bits (415),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 78/103 (76%), Positives = 97/103 (95%), Gaps = 0/103 (0%)

Query  28   NQALVNRFQAlmqsssplppsmqRVGSPSMMSRVVDVQNDGVRTIAEHIDAFTMQAPTMG  87
            NQ+LVNRFQALMQSS PLPP+MQRVG PSM+SR+VD+QNDGVR+++EH+DAF  +AP MG
Sbjct  28   NQSLVNRFQALMQSSCPLPPAMQRVGEPSMISRMVDMQNDGVRAMTEHVDAFGANAPKMG  87

Query  88   LQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGKNAVQTLVKNQ  130
            L+E+AA+++KL++ELTMVGFNLNVSV++AQSGKNAVQTL KNQ
Sbjct  88   LEEIAAEEMKLINELTMVGFNLNVSVSLAQSGKNAVQTLFKNQ  130