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Homologs of SF2971 gene of NC_004337_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SbBS512_E4655
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-287

99.6

2) SeHA_C4711
( - )

NC_011083
(Salmonella enterica SL476)

e-249

94.6

• Sequence Alignments

1) SbBS512_E4655 in NC_010658


>NC_004337_P1|10|G7|24114235|NP_708745.1|Shigella_flexneri_2a_str._301|+|13336..13842|-|SF2971|hypothetical 
          Length = 507

 Score = 983 bits (2538), Expect = e-287
 Identities = 505/507 (100%)
 Strand = Plus / Plus

Query: 178 atggtggcccggggatttacaggcagtgaaaccatcgtcagggatgcggttgccaaatgg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggtggcccggggatttacaggcagtgaaaccatcgtcagggatgcggttgccaaatgg 60

Query: 238 cgtaaaggctggaacccaccggttactactgccgtcagacttccttcagtgtcccgggta 297
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61  cgtaaaggctggaacccaccggttactactgccgtcagacttccttcagtctcccgggta 120

Query: 298 agccgctggttgatgccctggagaataaccagggatgaagaaaattatgcttcccgattt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agccgctggttgatgccctggagaataaccagggatgaagaaaattatgcttcccgattt 180

Query: 358 attagtctgatgtgtgaaaaagaacctgagctgaaaatagcgcagcaactggcactcgag 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attagtctgatgtgtgaaaaagaacctgagctgaaaatagcgcagcaactggcactcgag 240

Query: 418 ttctaccgtattctgaaaacccaaaataaatcacagctaagcagttggttcactcgagtc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctaccgtattctgaaaacccaaaataaatcacagctaagcagttggttcactcgagtc 300

Query: 478 cacgaaagcggttcagcagaatttcggcgcgtggcggcggggatgcaagctgatgctgca 537
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 cacgaaagcggttcagcagaatttcggcgcgtggcggcggggatggaagctgatgctgca 360

Query: 538 gctatatgtgaggcaatcagtagtcgctggagtaatggtgttgtcgaaggtcatgtaaat 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctatatgtgaggcaatcagtagtcgctggagtaatggtgttgtcgaaggtcatgtaaat 420

Query: 598 cgcctgaagaagatgctgaaacgccagatgtatggtcgagcaggatttgaactactcagg 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgcctgaagaagatgctgaaacgccagatgtatggtcgagcaggatttgaactactcagg 480

Query: 658 cagagggtaatgagtccactggcatga 684
           |||||||||||||||||||||||||||
Sbjct: 481 cagagggtaatgagtccactggcatga 507

2) SeHA_C4711 in NC_011083


>NC_004337_P1|10|G7|24114235|NP_708745.1|Shigella_flexneri_2a_str._301|+|13336..13842|-|SF2971|hypothetical 
          Length = 507

 Score = 856 bits (2208), Expect = e-249
 Identities = 461/491 (94%)
 Strand = Plus / Plus

Query: 56  ttacaggcagtgaaaccatcgtcagggatgctgttgccaaatggcgtaaaggctggaacc 115
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17  ttacaggcagtgaaaccatcgtcagggatgcggttgccaaatggcgtaaaggctggaacc 76

Query: 116 caccagttactactgccgccagacttccttcagtgtcccgggtaagccgctggttgatgc 175
           |||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 77  caccggttactactgccgtcagacttccttcagtctcccgggtaagccgctggttgatgc 136

Query: 176 cctggataataatcaggggtgaagaaaattatgcttcccgatttattagtctgatgtgtg 235
           |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cctggagaataaccagggatgaagaaaattatgcttcccgatttattagtctgatgtgtg 196

Query: 236 aaaaagaaccggcgctgaaaatagcgcagcaactagtacttgagttctaccgtattctga 295
           |||||||||| | ||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 197 aaaaagaacctgagctgaaaatagcgcagcaactggcactcgagttctaccgtattctga 256

Query: 296 aaaccccaaataaatcaaatctaagcagttggttcactcgagtccacgaaaacggttcag 355
           |||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 257 aaacccaaaataaatcacagctaagcagttggttcactcgagtccacgaaagcggttcag 316

Query: 356 cagaacttcggcgcgtggctgcggggatggaagctgatgctgcggctatatgtgaggcaa 415
           ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 317 cagaatttcggcgcgtggcggcggggatggaagctgatgctgcagctatatgtgaggcaa 376

Query: 416 ccagcagccgctggagtaacggtgttgtcgaaggtcatgtaaatcgcctgaaga---tgc 472
            ||| || ||||||||||| ||||||||||||||||||||||||||||||||||   |||
Sbjct: 377 tcagtagtcgctggagtaatggtgttgtcgaaggtcatgtaaatcgcctgaagaagatgc 436

Query: 473 tgaaacgtctgatgtatggtcgagccggatttgaactacttaggcagagggtaatgagtc 532
           ||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 437 tgaaacgccagatgtatggtcgagcaggatttgaactactcaggcagagggtaatgagtc 496

Query: 533 cactggcatga 543
           |||||||||||
Sbjct: 497 cactggcatga 507


 Score = 28 bits (73), Expect = 1e+01
 Identities = 14/14 (100%)
 Strand = Plus / Plus

Query: 41 atggtggcccgggg 54
          ||||||||||||||
Sbjct: 1  atggtggcccgggg 14