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Homologs of VC0498 gene of NC_002505_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) VPBB_0172 in NC_019955


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  192 bits (712),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 141/144 (98%), Positives = 142/144 (99%), Gaps = 0/144 (0%)

Query  1    MSYSIYVDGAAPNNQHGCTRGGIGLVVMDEDNEIVHEESFTINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQ GCTRGGIGLVVMDEDNEIVHEES+TINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  FKVKAHSGIEGNERADLLAVEAAA  144
            FKVKAHSGIEGNERADLLAVEAA 
Sbjct  121  FKVKAHSGIEGNERADLLAVEAAE  144

2) O3Y_02330 in NC_016944


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)

Query  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  FKVKAHSGIEGNER  134
            FKVKAHSGIEGNER
Sbjct  121  FKVKAHSGIEGNER  134

3) VCD_001109 in NC_012668


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)

Query  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  FKVKAHSGIEGNER  134
            FKVKAHSGIEGNER
Sbjct  121  FKVKAHSGIEGNER  134

4) VC0498 in NC_002505


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)

Query  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  FKVKAHSGIEGNER  134
            FKVKAHSGIEGNER
Sbjct  121  FKVKAHSGIEGNER  134

5) VV0516 in NC_005139


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  183 bits (679),  Expect = 7e-48, Method: Compositional matrix adjust.
 Identities = 137/144 (96%), Positives = 140/144 (98%), Gaps = 0/144 (0%)

Query  1    MSYSIYVDGAAPNNQHGCTRGGIGLVVMDEDNEIVHEESFTINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQ GCTRGGIGLVVMDEDNEIVHEES+TINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRCWRRADKKPVKNRHLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDR WRRADKKPVKNR+LWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  EKVKAHSGVEGNERADLLAVEAAA  144
             KVKAHSG+EGNERADLLAVEAA 
Sbjct  121  FKVKAHSGIEGNERADLLAVEAAE  144

6) vfu_A00205 in NC_016602


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  178 bits (659),  Expect = 3e-46, Method: Compositional matrix adjust.
 Identities = 131/134 (98%), Positives = 132/134 (99%), Gaps = 0/134 (0%)

Query  1    MSYSIYVDGAAPNNQHGCMRGGIGLVVMDEDNEIVHEESFTINRKTDNaelellalieal  60
            MSYSIYVDGAAPNNQ GC RGGIGLVVMDEDNEIVHEES+TINRKTDNAELELLALIEAL
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   eyaeDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120
            EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  FKVKAHSGIEGNER  134
            FKVKAHSGIEGNER
Sbjct  121  FKVKAHSGIEGNER  134

7) VF_A0524 in NC_006841


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 97/142 (69%), Positives = 121/142 (86%), Gaps = 0/142 (0%)

Query  5    TYSIYIDGAAPNNQGGCMKGGIGIAVYDVNNELMDTCSITVNRATDNAELELMALVEGLE  64
            +YSIY+DGAAPNNQ GC +GGIG+ V D +NE+++  SIT+NR TDNAELEL+AL+E+LE
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALE  61

Query  65   YAADGDIIYSDSEFCVKGYNEWLDGWKAKGWRKADKKPVAYRELWQQVDALRkekyvevv  124
            YA DGD+IYSDS++CVKG+N W+D+WK +GWR+ADKKPV  R+LWQQVD L   KYVEV 
Sbjct  62   YAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEVF  121

Query  125  kvRAHSGVEGNEKADSLASMAA  146
            KV+AHSG+EGNE+AD LA  AA
Sbjct  122  KVKAHSGIEGNERADLLAVEAA  143

8) VV0806 in NC_005139


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 61/126 (49%), Positives = 96/126 (77%), Gaps = 5/126 (3%)

Query  34   SCALYIAVTASSVD-----GGIGLVVYNKAGELMDQQCLPMQGYTSNTELELIALVECMQ  88
            S ++Y+  +A++ +     GGIGLVV +   E+++++ + ++  T N+ELEL+AL+E ++
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALE  61

Query  89   YARDGDVIYTSSDFCVRGFNEWIDTWKQKGWRKSDKKPVANRDLWQQVDALRAEKYVEVI  148
            YA DGDVIY+ SD+CV+GFN W+D WK++GWR++DKKPV NR+LWQQVD L + KYVEV+
Sbjct  62   YAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEVF  121

Query  149  RATPST  154
            +  + +
Sbjct  122  KVKAHS  127

9) VPA0440 in NC_004605


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 72/145 (50%), Positives = 99/145 (69%), Gaps = 3/145 (2%)

Query  17   PLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCVYEYSSSVRRTGGVTSQRAEllaliia  76
            + SIY DG+AP+NQ GC +GG+G+ V D   + V E S ++ R  +  +   ELLALI A
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTD--NAELELLALIEA  59

Query  77   llVAGEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRV  136
            L  A +GD ++SDS+YCV+GFN W+D WK  +WR + KKPV N++LW  +DEL + R  V
Sbjct  60   LEYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSS-RKYV  118

Query  137  SVEHVAGHSGIKGNEHSDRLATQAA  161
             V  V +HSGI GNE++D LA +AA
Sbjct  119  EVFKVKAHSGIEGNERADLLAVEAA  143

10) VV2254 in NC_005139


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 98.1 bits (353),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 58/126 (47%), Positives = 95/126 (76%), Gaps = 5/126 (3%)

Query  34   SCALFIAVTASS-----VGGGIGLVVYDQAGERIDQQCLSMQGYICNTELELIALVECMQ  88
            S ++++  +A++       GGIGLVV D+  E ++++ ++++    N+ELEL+AL+E ++
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALE  61

Query  89   YARDGDVIYTSSDFCVRGFNEWIDTWKQKGWRKSDKKPVANRDLWQQIDALRAEKYVELI  148
            YA DGDVIY+ SD+CV+GFN W+D WK++GWR++DKKPV NR+LWQQ+D L + KYVE++
Sbjct  62   YAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEVF  121

Query  149  RATSST  154
            +  + +
Sbjct  122  KVKAHS  127

11) M636_18620 in NC_021848


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 97.5 bits (351),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 72/146 (50%), Positives = 100/146 (69%), Gaps = 3/146 (2%)

Query  17   PLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCVYEYSSSVRRTGGVTSQRAEllaliia  76
            + SIY DG+AP+NQ GC +GG+G+ V D   + V E S ++ R  +  +   ELLALI A
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTD--NAELELLALIEA  59

Query  77   llVAGEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRV  136
            L  A +GD ++SDS+YCV+GFN W+D WK  +WR + KKPV N++LW  +DEL + R  V
Sbjct  60   LEYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSS-RKYV  118

Query  137  SVEHLAGHSGIKGNEHSDRLARQAAE  162
             V  + +HSGI GNE++D LA +AAE
Sbjct  119  EVFKVKAHSGIEGNERADLLAVEAAE  144

12) VP0642 in NC_004603


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 97.5 bits (351),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 72/146 (50%), Positives = 100/146 (69%), Gaps = 3/146 (2%)

Query  17   PLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCVYEYSSSVRRTGGVTSQRAEllaliia  76
            + SIY DG+AP+NQ GC +GG+G+ V D   + V E S ++ R  +  +   ELLALI A
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTD--NAELELLALIEA  59

Query  77   llVAGEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRV  136
            L  A +GD ++SDS+YCV+GFN W+D WK  +WR + KKPV N++LW  +DEL + R  V
Sbjct  60   LEYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSS-RKYV  118

Query  137  SVEHLAGHSGIKGNEHSDRLARQAAE  162
             V  + +HSGI GNE++D LA +AAE
Sbjct  119  EVFKVKAHSGIEGNERADLLAVEAAE  144

13) N646_2794 in NC_022349


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 72/147 (49%), Positives = 101/147 (69%), Gaps = 3/147 (2%)

Query  17   PLSIYCDGSAPDNQHGCLQGGVGVAVYDALGYCIQEYSSSVRRAGGVTSQRAEllaliia  76
            + SIY DG+AP+NQ GC +GG+G+ V D     ++E S ++ R  +  +   ELLALI A
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTD--NAELELLALIEA  59

Query  77   llVAGEGDNVFSDSQYCVRGFNEWLDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRV  136
            L  A +GD ++SDS+YCV+GFN W+D WK  +WR + KKPV N++LW  +DEL + R  V
Sbjct  60   LEYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSS-RKYV  118

Query  137  SVEHVAGHSGIKGNEHSDCLARQAAEG  163
             V  V +HSGI GNE++D LA +AAE+
Sbjct  119  EVFKVKAHSGIEGNERADLLAVEAAEA  145

14) VS_1653 in NC_011753


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 94.4 bits (339),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 65/141 (47%), Positives = 103/141 (74%), Gaps = 0/141 (0%)

Query  5    NCAIYIGIATSKGNASKLQGGIGISVYNYDGQLVDKNNLLVGEIADSaelelialieaia  64
            + +IY++ A+++ + +  +GGIG+ V + D ++V+ +++ +   +D+AELEL+ALIEA+ 
Sbjct  2    SYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALE  61

Query  65   YARDGDCLYSSSEYCVKGFNEWLDNWKAKGWRKSDKKPVSNRHLWQQVDMHRASKFVEVR  124
            YA DGD +YS S+YCVKGFN W+D+WK +GWR++DKKPV NR+LWQQVD   + K+VEV 
Sbjct  62   YAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEVF  121

Query  125  RAHKVGDYEQMGRAGDMAREV  145
            +    ++ E   RA+ +A E 
Sbjct  122  KVKAHSGIEGNERADLLAVEA  142

15) VEA_001835 in NC_013456


> NC_002505_P2|10|G10|15640525|NP_230152.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|10051..10491|-|VC0498|ribonuclease 
H
Length=146

 Score = 82.6 bits (294),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 89/128 (70%), Gaps = 0/128 (0%)

Query  1    MNTEIYVEAAMVRKQRDRLVGGVGLIVIDDDACIEHEDWEYFGYVADQTYLELSVLAFGL  60
            M+  IYV++A   +Q +   GG+GL+V+D+D  I HE+   +   +D++ LEL  L  +L
Sbjct  1    MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEAL  60

Query  61   KHARDGDIIYSSSDYCVKGFNEWLDGWKRRDWRKANKEPVANEDLWRLVDERSAEKRVEV  120
              A DGD+IYS SDYCVKGFN W+D+WK R+WR+A+K PV N +LW+ VDE S+ K VEV
Sbjct  61   EYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSRKYVEV  120

Query  121  RKVAACSA  128
             KV A S+
Sbjct  121  FKVKAHSG  128