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Homologs of hrpL gene of DQ168848

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) H650_14875
( YP_008108775.1 )

hypothetical protein

NC_021500
(Enterobacter sp. R4-368)

1e-37

2) hrpL
( YP_003539960.1 )

sigma factor HrpL

NC_013971
(Erwinia amylovora ATCC 49946)

1e-35

3) hrpL
( YP_003529894.1 )

RNA polymerase sigma factor HrpL

NC_013961
(Erwinia amylovora CFBP1430)

1e-35

4) hrpL
( YP_005804083.1 )

RNA polymerase sigma factor HrpL

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-35

5) hrpL
( YP_002650066.1 )

hrp/hrc type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-35

6) hrpL
( YP_005818263.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-sigma factor

NC_017445
(Erwinia sp. Ejp617)

2e-35

7) PSEBR_a5390
( YP_004356901.1 )

RNA polymerase sigma factor

NC_015379
(Pseudomonas brassicacearum NFM421)

8e-35

8) Marme_1067
( YP_004312178.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_015276
(Marinomonas mediterranea MMB-1)

4e-34

9) hrpL
( YP_005210977.1 )

protein HrpL

NC_016830
(Pseudomonas fluorescens F113)

6e-33

10) D781_3946
( YP_007346321.1 )

RNA polymerase sigma factor, sigma-70 family

NC_020064
(Serratia marcescens FGI94)

1e-32

11) rspL
( YP_002870376.1 )

sigma factor

NC_012660
(Pseudomonas fluorescens SBW25)

9e-33

12) PC1_2204
( YP_003017779.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_012917
(Pectobacterium carotovorum PC1)

4e-32

13) PCC21_022820
( YP_006646938.1 )

sigma factor

NC_018525
(Pectobacterium carotovorum PCC21)

4e-32

14) hrpL
( YP_050182.1 )

sigma factor

NC_004547
(Pectobacterium atrosepticum SCRI1043)

8e-32

15) hrpL
( YP_003883238.1 )

RNA polymerase sigma-54 factor rpoN

NC_014500
(Dickeya dadantii 3937)

2e-31

16) rspL
( YP_006322223.1 )

RNA polymerase sigma factor RspL

NC_017911
(Pseudomonas fluorescens A506)

2e-31

17) H045_00150
( YP_007395602.1 )

sigma factor

NC_020209
(Pseudomonas poae RE*1-1-14)

4e-31

18) Dd586_1890
( YP_003333454.1 )

ECF subfamily RNA polymerase sigma-24 subunit

NC_013592
(Dickeya dadantii Ech586)

5e-31

19) Ser39006_2911
( YP_008523293.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_022268
(Serratia sp. ATCC 39006)

7e-30

20) hrpL
( YP_001906471.1 )

Sigma factor HrpL (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-28

21) hrpL
( NP_791231.1 )

RNA polymerase sigma factor HrpL

NC_004578
(Pseudomonas syringae DC3000)

4e-28

22) hrpL
( YP_273553.1 )

RNA polymerase sigma factor HrpL

NC_005773
(Pseudomonas syringae 1448A)

1e-27

23) Psyr_1217
( YP_234309.1 )

sigma-70 region 2:sigma-70 region 4

NC_007005
(Pseudomonas syringae B728a)

2e-27

24) Dd1591_1893
( YP_003004222.1 )

RNA polymerase, sigma-24 subunit, ECF subfamily

NC_012912
(Dickeya zeae Ech1591)

2e-26

• Sequence Alignments

1) H650_14875 in NC_021500


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 81/161 (51%), Positives = 123/161 (77%), Gaps = 0/161 (0%)

Query  17   AFDIDELVANTTTRLRKFISRRVYNQSDVDDLVQMTYLEAFRNQHKFIGASSKETWLFGI  76
            A+D++ L  ++  +LR FI++RV+NQ+DVDDL+QMTYLEA RNQHK++G+S  ETWLFGI
Sbjct  12   ALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGI  71

Query  77   ASNLVRNHFKKTFNKPEMVALDDVNFLISDQIFNPDYINEHKIQLSETIAMVDKLPLKMQ  136
            A+NLVRNHFK  +N+P+ + L D ++   +Q  +P  +++ +  L+ T+  ++ L++ M+
Sbjct  72   AANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMR  131

Query  137  NVIYHIMDSDTSYNDAAEQLGIPIGTIRSRLSRVRKILKNN  177
             VI  ++DSD SY+DAA +L+IPIGTIRSRL+R R  LK++
Sbjct  132  TVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSS  172

2) hrpL in NC_013971


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 82/165 (50%), Positives = 120/165 (73%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELEDDII--LTQGDDPSHITEYQRLLNSTLNSIANLPEDT  137
            IA NLVRNHF+    +P+C EL D  +  L QG+DPS +++YQR L  TL++I +L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLLNMLVEKDGSYQAIAAHLNIPIGTVRSRLSRARVTLKQSVFS  182
            R +++++V+ D SYQ  A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

3) hrpL in NC_013961


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 82/165 (50%), Positives = 120/165 (73%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELEDDII--LTQGDDPSHITEYQRLLNSTLNSIANLPEDT  137
            IA NLVRNHF+    +P+C EL D  +  L QG+DPS +++YQR L  TL++I +L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLLNMLVEKDGSYQAIAAHLNIPIGTVRSRLSRARVTLKQSVFS  182
            R +++++V+ D SYQ  A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

4) hrpL in NC_017445


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 83/165 (51%), Positives = 120/165 (73%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELDDDII--LTQGDDPSHITEYQRLLNSTLNSIAVLPEDA  137
            IA NLVRNHF+    +P+C EL D  +  L QG+DPS +++YQR L  TL++I  L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLMNMLVEKDGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSVFS  182
            R +++++V+ D SYQD A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

5) hrpL in NC_017390


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 83/165 (51%), Positives = 120/165 (73%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELDDDII--LTQGDDPSHITEYQRLLNSTLNSIAVLPEDA  137
            IA NLVRNHF+    +P+C EL D  +  L QG+DPS +++YQR L  TL++I  L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLMNMLVEKDGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSVFS  182
            R +++++V+ D SYQD A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

6) hrpL in NC_012214


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  141 bits (519),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 83/165 (51%), Positives = 120/165 (73%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELDDDII--LTQGDDPSHITEYQRLLNSTLNSIAVLPEDA  137
            IA NLVRNHF+    +P+C EL D  +  L QG+DPS +++YQR L  TL++I  L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLMNMLVEKDGSYQDIAAHLNIPIGTVRSRLSRARVTLKQSVFS  182
            R +++++V+ D SYQD A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

7) PSEBR_a5390 in NC_015379


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  139 bits (511),  Expect = 8e-35, Method: Compositional matrix adjust.
 Identities = 83/160 (52%), Positives = 119/160 (75%), Gaps = 0/160 (0%)

Query  34   PGICFGEERKLRLFVQKRVLNQDDADDIIQLTYLEAWRNQQKFRGLAKQDTWLCGIALNL  93
             G+  + E+KLR F+ KRV+NQ D DD++Q+TYLEAWRNQ+K+ G ++ +TWL GIA NL
Sbjct  16   GGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANL  75

Query  94   IRNHFRRFYAQPPLTTFDESEFHESSDDIDLSELCDNRRLLDRTLLAMDALSKDMRDTLW  153
            +RNHF+ FY QP    + +SE+++  ++ D S + D +R L+RTL A++ LS DMR  + 
Sbjct  76   VRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQ  135

Query  154  TAVDTESSYRDAAERLGVPIGTVRSRLFRAREQLKRSVYG  193
              VD++ SY+DAA +L++PIGT+RSRL RAR QLK SVY+
Sbjct  136  LVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

8) Marme_1067 in NC_015276


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  137 bits (503),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 72/163 (45%), Positives = 122/163 (75%), Gaps = 2/163 (1%)

Query  16   IDIAHLHSNQNEKLRRFISKKIWHKEDAEEVLQFTYLEAIRCQHKFIGDSKPETWLFGIA  75
            +D++ L  + + KLR FI+K++ ++ D ++++Q TYLEA R QHK++G S+PETWLFGIA
Sbjct  13   LDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIA  72

Query  76   ANLTKNYFKRYYNAPELEEMTESLIMDLESEIEADPAMLVEHENLLTKTVDAMSQLPSDT  135
            ANL +N FK +YN P+  E+T+S + +LE     DP+++ + +  L +T++A+ +L+ D 
Sbjct  73   ANLVRNHFKTFYNQPQCMELTDSELENLEQ--GHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  136  QSILDMVIEKDFSYQEAADSIGVPIGTIRSRLSRARQLLKQCI  178
            ++++++V++ D+SYQ+AA  +++PIGTIRSRL+RAR  LK  +
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

9) hrpL in NC_016830


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  133 bits (487),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 82/160 (52%), Positives = 118/160 (74%), Gaps = 0/160 (0%)

Query  20   PGICFGEERKLRLFVQKRVLNQDDADDIIQLTYLEAWRNQQKFKGLAKQDTWLCGIALNL  79
             G+  + E+KLR F+ KRV+NQ D DD++Q+TYLEAWRNQ+K+ G ++ +TWL GIA NL
Sbjct  16   GGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANL  75

Query  80   IRNHFRRFYAQPPlstfdesefsessddidlselCDNRRLLDRTLSAMDALPKDMRDTLW  139
            +RNHF+ FY QP    + +SE+ +  ++ D S + D +R L+RTL A++ L+ DMR  + 
Sbjct  76   VRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQ  135

Query  140  TAVDTESSYRDAAERLGVPIGTVRSRLFRAREQLKRSVYG  179
              VD++ SY+DAA +L++PIGT+RSRL RAR QLK SVY+
Sbjct  136  LVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

10) D781_3946 in NC_020064


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  132 bits (483),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 79/166 (48%), Positives = 121/166 (73%), Gaps = 4/166 (2%)

Query  17   IPVDWEGIFKQSNKKLINFIRRRVASTEDVEDIAQMTCLEVLRNRHKFTGASLPETWMFG  76
            I++D  G+ K S+KKL  FI +RV +  DV+D+ QMT LE  RN+HK+ G+S PETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  77   IAINLIRNHYKR--QQHRYLFDTLNDEVLENLLHDDDPSALTEHQRLLTTALTSIDRLPE  134
            IA NL+RNH+K   +Q + +   L D  LENL +++DPS +++ QR L  +L +I+ L+ 
Sbjct  71   IAANLVRNHFKTFYNQPQCM--ELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSV  128

Query  135  EIKHMLTILIGDDGSYQDIAQQLNIPIGTVRSRLSRARETLKSQVF  180
            +++ ++ ++++ D SYQD A++L+IPIGT+RSRL+RAR  LKS V+
Sbjct  129  DMRTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVY  174

11) rspL in NC_012660


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  132 bits (486),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 76/170 (45%), Positives = 118/170 (70%), Gaps = 2/170 (1%)

Query  9    AHLVGSSPQFMHHLTDDQQKKLRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGNATL  68
            + ++G  +  +  L+   +KKLR FI KRV+N  D DDL+Q+TYLEAWRN++++ G +  
Sbjct  5    GKVIGVIALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRP  64

Query  69   STWMCGIAQNLIRNHFRRLYAKPVHC-EFDESLWHGQEDNHNLDWEFEINRRLEKTLSAI  127
             TW+ GIA NL+RNHF+ +Y +P +C E+ +S  +  E+ H+     + +R L +TL AI
Sbjct  65   ETWLFGIAANLVRNHFKTFYNQP-QCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAI  123

Query  128  DHLPIEMRKTLYASLETDGSYQDTADALDIPIGTVRSRLSRAREQLKRAT  177
            ++L+++MR  +   +++D SYQD+A  LDIPIGT+RSRL+RAR QLK + 
Sbjct  124  EELSVDMRTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

12) PC1_2204 in NC_012917


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 76/154 (50%), Positives = 113/154 (74%), Gaps = 2/154 (1%)

Query  28   RQHGKKLHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNY  87
            +   KKL+ FI KRV N+ DV+DL QMTYLE  ++Q+K+ G+SRPETW+FGIA NLVRN 
Sbjct  20   KSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNH  79

Query  88   FKQ--ARQRAQEMGDEMLEHIAIDLDPGAIAESQRALKRAMDAIVSLPEDTRQMLMQLLD  145
            FK    + +  E+ D  LE++  + DP+ +++ QR+L R+++AI  L+ D R ++  ++D
Sbjct  80   FKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  146  TDASYQDLALQLEIPIGTVRSRLSRARGVIRQAV  179
            +D SYQD A +L+IPIGT+RSRL+RARG ++ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

13) PCC21_022820 in NC_018525


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 76/154 (50%), Positives = 112/154 (73%), Gaps = 2/154 (1%)

Query  28   RQHGKKLHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNY  87
            +   KKL+ FI KRV N+ DV+DL QMTYLE  ++Q+K+ G+SRPETW+FGIA NLVRN 
Sbjct  20   KSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNH  79

Query  88   FKQ--ARQRAQEMGDEMLEHIAIELDPGAITESQRSLKRAMDAIVSLPEDTRQMLMQLLD  145
            FK    + +  E+ D  LE++    DP+ +++ QR+L R+++AI  L+ D R ++  ++D
Sbjct  80   FKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  146  TDASYQDLALQLEIPIGTVRSRLSRARGVIRQAV  179
            +D SYQD A +L+IPIGT+RSRL+RARG ++ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

14) hrpL in NC_004547


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  129 bits (474),  Expect = 8e-32, Method: Compositional matrix adjust.
 Identities = 76/154 (50%), Positives = 112/154 (73%), Gaps = 2/154 (1%)

Query  27   RQHGKKLHNFIRKRVSNHDDVEDLQQMTYLEVLKHQDKFAGASRPETWVFGIALNLVRNY  86
            +   KKL+ FI KRV N+ DV+DL QMTYLE  ++Q+K+ G+SRPETW+FGIA NLVRN 
Sbjct  20   KSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNH  79

Query  87   FKQ--ARQRAQEMGDEMLEHIAIELDPGAITESQRALKRAMDAIVSLPEDTRQMLMQLLD  144
            FK    + +  E+ D  LE++    DP+ +++ QR+L R+++AI  L+ D R ++  ++D
Sbjct  80   FKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  145  TDASYQDLALQLGIPIGTVRSRLSRARGVIRQAV  178
            +D SYQD A +L+IPIGT+RSRL+RARG ++ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

15) hrpL in NC_014500


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  128 bits (468),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 76/154 (50%), Positives = 115/154 (75%), Gaps = 7/154 (4%)

Query  32   KRLQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQA  91
            K+L+ FI KRV N+ DV+DL QMTYLE  +N++K+ G+SRPETW+FGIA NLVRNHFK +
Sbjct  24   KKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNHFK-T  82

Query  92   RYRA---VDISDDALEVAEILSTDIDPSRITECDHSLNRALAASAHLPEETRKMLMMLLD  148
             Y     ++++D  LE    L  + DPS +++ +++L R+L A  +L+ + R ++ +++D
Sbjct  83   FYNQPQCMELTDSELEN---LEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  149  ADVSYQDIAEQLNIPIGTVRSRLSRARGYLRQAV  182
            +D+SYQD A +L+IPIGT+RSRL+RARG L+ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

16) rspL in NC_017911


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 76/154 (50%), Positives = 109/154 (71%), Gaps = 2/154 (1%)

Query  22   LTDDQQKKLRRFIHKRVLNPEDADDLLQLTYLEAWRNRERFSGTATLSTWMCGIAQNLIR  81
            L+   +KKLR FI KRV+N  D DDL+Q+TYLEAWRN++++ GT+   TW+ GIA NL+R
Sbjct  18   LAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVR  77

Query  82   NHFRRLYAKPSHC-EFDESLWHGHEENHSLDWEFEVNRRLENTLSAIDHLPTEMRRTLYA  140
            NHF+ +Y +P +C E+ +S  +  E+ H      + +R L  TL AI++L+ +MR  +  
Sbjct  78   NHFKTFYNQP-QCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQL  136

Query  141  SLETDGSYQDTADVLDIPIGTVRSRLSRAREQLK  174
             +++D SYQD+A  LDIPIGT+RSRL+RAR QLK
Sbjct  137  VVDSDISYQDAARHLDIPIGTIRSRLARARGQLK  170

17) H045_00150 in NC_020209


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  127 bits (465),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 74/154 (49%), Positives = 109/154 (71%), Gaps = 2/154 (1%)

Query  22   LTDDQQKKLRRFIHKRVLNPEDADDILQLTYLEAWRNRERFSGQASLSTWMCGIAQNLVR  81
            L+   +KKLR FI KRV+N  D DD++Q+TYLEAWRN++++ G +   TW+ GIA NLVR
Sbjct  18   LAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVR  77

Query  82   NHFRRLYAKPVHC-EFDESLWHGQEENKNLDWEFEINRRLEKTLSAIDHLPAEMRKTLYA  140
            NHF+ +Y +P +C E+ +S  +  E+  +     + +R L +TL AI++L+ +MR  +  
Sbjct  78   NHFKTFYNQP-QCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQL  136

Query  141  SLETDGSYQDTANVLDIPIGTVRSRLSRAREQLK  174
             +++D SYQD+A  LDIPIGT+RSRL+RAR QLK
Sbjct  137  VVDSDISYQDAARHLDIPIGTIRSRLARARGQLK  170

18) Dd586_1890 in NC_013592


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  127 bits (464),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 78/154 (51%), Positives = 117/154 (76%), Gaps = 7/154 (4%)

Query  32   KRLQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQA  91
            K+L+ FI KRV N+ DV+DL QMTYLE  +N++K+ G+SRPETW+FGIA NLVRNHFK +
Sbjct  24   KKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNHFK-T  82

Query  92   RYRT---VDISDEVLEVVEVMSTDIDPSRITECDHALDRALAASAHLPEDTRKMLVMLLD  148
             Y     ++++D  LE +E    + DPS +++ +++L+R+L A  +L+ D R ++ +++D
Sbjct  83   FYNQPQCMELTDSELENLE---QGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  149  ADISYQDIATQLNIPIGTVRSRLSRARGYLRQAV  182
            +DISYQD A +L+IPIGT+RSRL+RARG L+ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

19) Ser39006_2911 in NC_022268


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 75/154 (49%), Positives = 110/154 (72%), Gaps = 2/154 (1%)

Query  28   RQHGKRLHNFIRKRVSNREDVEDLQQMTYLEVLKNSEKFAGASRPETWVFGIALNLVRNH  87
            +   K+L+ FI KRV N+ DV+DL QMTYLE  +N +K+ G+SRPETW+FGIA NLVRNH
Sbjct  20   KSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNH  79

Query  88   FKQ--ARIRANEVGDEILEFLSNDIDPSRIVECDYSLVRAVAATAQLPEETRKMLLMLID  145
            FK    + +  E+ D  LE L ++ DPS + + + +L R++ A  +L+ + R ++ +++D
Sbjct  80   FKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVD  139

Query  146  SDVSYQDIANMLNIPIGTVRSRLSRARHFLRQAV  179
            SD+SYQD A  L+IPIGT+RSRL+RAR  L+ +V
Sbjct  140  SDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

20) hrpL in NC_010694


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 80/165 (49%), Positives = 117/165 (71%), Gaps = 2/165 (1%)

Query  20   LNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFG  79
            + +D  G+ +   ++++ FI KRV ++ D +DL QMT LE  RN++K+ G+SRPETW+FG
Sbjct  11   IALDLGGLAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFG  70

Query  80   IALNLVRNHFRLQSGRPRCDELEDDIV--VVQGDDPSHITEHQRILTSTLNSIAALPEDT  137
            IA NLVRNHF+    +P+C EL D  +  + QG+DPS +++ QR L  TL++I  L+ D 
Sbjct  71   IAANLVRNHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDM  130

Query  138  RRLMSMLVEKDGSYQAIAAHLNIPIGTvrsrlsrarvslKQSVFS  182
            R ++ ++V+ D SYQ  A HL+IPIGT+RSRL+RAR  LK SV+S
Sbjct  131  RTVIQLVVDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSVYS  175

21) hrpL in NC_004578


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  117 bits (426),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 70/151 (47%), Positives = 109/151 (73%), Gaps = 2/151 (1%)

Query  31   QMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKM  90
            + LR+FI KRV N  DVDD++Q  +LEA RN+HK+  +S+P+TWL GIA NL+RNHF+  
Sbjct  24   KKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNHFKTF  83

Query  91   YRQP-YQESWEDEVHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDG  149
            Y QP   E  + E+++  +GH D S   + +R L+R ++AI+ L+ +M+ V+++ ++ D 
Sbjct  84   YNQPQCMELTDSELENLEQGH-DPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVDSDI  142

Query  150  NYQETANSLGVPIGTVRSRLSRARVQLKQQI  180
            +YQ++A  L++PIGT+RSRL+RAR QLK  +
Sbjct  143  SYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

22) hrpL in NC_005773


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 71/156 (46%), Positives = 105/156 (68%), Gaps = 0/156 (0%)

Query  25   LTADQIQMLRAFIQKRVMNPDDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIR  84
            L+    + LR+FI KRV N  DVDD++Q  +LEA RN+HK+  +S+P+TWL GIA NL+R
Sbjct  18   LAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVR  77

Query  85   NHFRKMYRQPYQESWEDDVHSELEWNGDITHQVDGHRQLARVIAAIDCLPSNMQKVLEVS  144
            NHF+  Y QP      D    +LE   D +   D +R L+R + AI+ L+ +M+ V+++ 
Sbjct  78   NHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLV  137

Query  145  LEMDGNYQDTANTLGVPIGTVRSRLSRARVQLKQQI  180
            ++ D +YQD+A  L++PIGT+RSRL+RAR QLK  +
Sbjct  138  VDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

23) Psyr_1217 in NC_007005


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 71/156 (46%), Positives = 106/156 (68%), Gaps = 0/156 (0%)

Query  25   LTADQVQMLRAFIQKRVKNADDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIR  84
            L+    + LR+FI KRV N  DVDD++Q  +LEA RN+HK+  +S+P+TWL GIA NL+R
Sbjct  18   LAKSSEKKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVR  77

Query  85   NHFRKMYRQPYQESWEDEVHTDLEWNGDITHQVDGHRQLARVIEAIDCLPTNMQKVLEVS  144
            NHF+  Y QP      D    +LE   D +   D +R L+R +EAI+ L+ +M+ V+++ 
Sbjct  78   NHFKTFYNQPQCMELTDSELENLEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLV  137

Query  145  LEMDGNYQETANTLGVPIGTVRSRLSRARVQLKQHI  180
            ++ D +YQ++A  L++PIGT+RSRL+RAR QLK  +
Sbjct  138  VDSDISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173

24) Dd1591_1893 in NC_012912


> DQ168848|10|G10|76574797|ABA47271.1|Pseudomonas_cichorii_83-1|-|9098..9637|hrpL|-|HrpL
Length=179

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 75/153 (50%), Positives = 115/153 (76%), Gaps = 5/153 (3%)

Query  32   KRLQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQ-  90
            K+L+ FI KRV N+ DV+DL QMTYLE  +N++K+ G+SRPETW+FGIA NLVRNHFK  
Sbjct  24   KKLRGFIAKRVFNQADVDDLMQMTYLEAWRNQHKYLGTSRPETWLFGIAANLVRNHFKTF  83

Query  91   -ARYRAFDISDEALEVAEILSTDIDPSRITECDhslsralaasahlPEETRKMLMMLLDA  149
              + +  +++D  LE    L  + DPS +++ +++L+R+L A  +L+ + R ++ +++D+
Sbjct  84   YNQPQCMELTDSELEN---LEQGHDPSLVSDYQRTLGRTLEAIEELSVDMRTVIQLVVDS  140

Query  150  DVSYQDIAEQLNIPIGTVRSRLSRARGYLRQAV  182
            D+SYQD A +L+IPIGT+RSRL+RARG L+ +V
Sbjct  141  DISYQDAARHLDIPIGTIRSRLARARGQLKSSV  173