Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of ORF C5 gene of AF440523

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Rmet_2399
( YP_584545.1 )

hypothetical protein

NC_007973
(Cupriavidus metallidurans CH34)

9e-37

100

2) Ajs_1351
( YP_985644.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

1e-28

3) XCV2302
( YP_364033.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

1e-28

4) TKWG_13720
( YP_006379825.1 )

hypothetical protein

NC_017964
(Advenella kashmirensis WT001)

5e-27

5) TKWG_18820
( YP_006380577.1 )

hypothetical protein

NC_017964
(Advenella kashmirensis WT001)

4e-24

6) DSC_06740
( YP_004930040.1 )

hypothetical protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

4e-15

7) CtCNB1_2686
( YP_003278728.1 )

hypothetical protein

NC_013446
(Comamonas testosteroni CNB-1)

4e-13

8) AZOLI_p50219
( YP_005041286.1 )

hypothetical protein

NC_016624
(Azospirillum lipoferum 4B)

7e-09

9) AZL_e02510
( YP_003453140.1 )

hypothetical protein

NC_013859
(Azospirillum sp. B510)

3e-08

10) DelCs14_2609
( YP_004487976.1 )

hypothetical protein

NC_015563
(Delftia sp. Cs1-4)

4e-08

11) Daci_4242
( YP_001565258.1 )

hypothetical protein

NC_010002
(Delftia acidovorans SPH-1)

1e-07

12) BN115_2777
( YP_006901011.1 )

hypothetical protein

NC_018829
(Bordetella bronchiseptica MO149)

2e-07

13) SPISAL_05145
( YP_008046588.1 )

hypothetical protein

NC_021291
(Spiribacter salinus M19-40)

3e-06

14) mma_3538
( YP_001355228.1 )

hypothetical protein

NC_009659
(Janthinobacterium sp. Marseille)

5e-06

15) Csal_0180
( YP_572243.1 )

hypothetical protein

NC_007963
(Chromohalobacter salexigens DSM 3043)

7e-04

16) BN112_0147
( YP_006966239.1 )

hypothetical protein

NC_019382
(Bordetella bronchiseptica 253)

0.47

17) BB2321
( NP_888864.1 )

hypothetical protein

NC_002927
(Bordetella bronchiseptica RB50)

1.3

18) BPP1253
( NP_883565.1 )

hypothetical protein

NC_002928
(Bordetella parapertussis 12822)

1.3

19) BN117_2200
( YP_006896128.1 )

hypothetical protein

NC_018828
(Bordetella parapertussis Bpp5)

1.4

• Sequence Alignments

1) Rmet_2399 in NC_007973


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score =  146 bits (536),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)

Query  1    MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVanaqavaaaldtaPSD  60
            MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSD
Sbjct  1    MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSD  60

Query  61   LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107
            LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA
Sbjct  61   LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

2) Ajs_1351 in NC_008782


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 69/107 (65%), Positives = 90/107 (85%), Gaps = 0/107 (0%)

Query  1    MSQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAE  60
            M+Q+ Q  +LKVILHAPT+ A+ERAR NA NL R APDA++RI+ NA+AV AALD A ++
Sbjct  1    MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSD  60

Query  61   VDIHTWVCPTTLTRIGRENRPPLQVMAGPAVIEIARMQRTGWVYIRS  107
            +D  TWVCP TL+RIGR+NR PL+V+ GPAVIE+ARMQ++GW+YIR+
Sbjct  61   LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

3) XCV2302 in NC_007508


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 69/107 (65%), Positives = 90/107 (85%), Gaps = 0/107 (0%)

Query  1    MSQNIQNQALKVILHAPTPAALERARKNAVNLLREAPDAELRIILNAEAVKAALDQAHAE  60
            M+Q+ Q  +LKVILHAPT+ A+ERAR NA NL R APDA++RI+ NA+AV AALD A ++
Sbjct  1    MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSD  60

Query  61   VDIHTWVCPTTLTRIGRENRPPLQVMAGPAVIEIARMQRTGWVYIRS  107
            +D  TWVCP TL+RIGR+NR PL+V+ GPAVIE+ARMQ++GW+YIR+
Sbjct  61   LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

4) TKWG_13720 in NC_017964


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 68/98 (70%), Positives = 85/98 (87%), Gaps = 0/98 (0%)

Query  1    MKVILHAPTASALERARNNATNLKREDPDAHVRIIANAQAVGAALDIVHEQLDSITWLCP  60
            +KVILHAPTA A+ERAR+NATNLKR  PDA+VRI+ANAQAV+AALD    +LD++TW+CP
Sbjct  10   LKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWVCP  69

Query  61   ISLDRAGRQNREPLQVLTGPAVLEMVRLQQDGWVYLRA  98
             +L R GR+NREPL+VL GPAV+EM R+QQ GW+Y+RA
Sbjct  70   NTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

5) TKWG_18820 in NC_017964


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 61/103 (60%), Positives = 83/103 (81%), Gaps = 0/103 (0%)

Query  2    SDQAVLKVVLHAPTADALQRARSNAGNLLREEPGAHVKIVLNAQAAIAALDEPQEALDAI  61
            ++++ LKV+LHAPTA+A++RARSNA NL R  P+A+V+IV NAQA  AALD +   LDA+
Sbjct  5    TQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDAL  64

Query  62   TWLCPNTLNRANRQNRAPLQVLAHGAILELARLQQDGWAYIRT  104
            TW+CPNTL+R  R+NR PL+VL   A++E+AR+QQ GW YIR+
Sbjct  65   TWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

6) DSC_06740 in NC_016147


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 74.4 bits (263),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 72/100 (72%), Gaps = 2/100 (2%)

Query  1    MRIVLHASSPASLERARSNAKNAAGAGERAVEVRIVVNGAAAVSSLLDQADAAVDAMTWV  60
            ++++LHA+++ ++ERARSNA N   A+    +VRIV N+ A  ++L D A + +DA+TWV
Sbjct  10   LKVILHAPTAEAFERARSNATNLKRAAP-DADVRIVANAQAVAAAL-DTAPSDLDALTWV  67

Query  61   CPNTLRGLKRQAAAPLRVLEEGAVLAIARLQQAGWHYIHA  100
            CPNTL  + R+   PL VL+  AV+ +AR+QQAGW YI+A
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

7) CtCNB1_2686 in NC_013446


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 67.6 bits (237),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 73/104 (71%), Gaps = 4/104 (3%)

Query  14   RPSTRIVLHAPSTQALIRARGNFKNLKAANPELEVWIVVNAQAVQAVLD-QPDDMGPALA  72
            RP+ +++LHAP+++A+ RAR+N  NLK A P+ +V+IV NAQAV A LD  P D++ AL+
Sbjct  7    RPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLD-ALT  65

Query  73   HVLLCPNTLRNAGISAPDNIQVLPMGAVEAIARMQQGGWTYIRS  116
             V  CPNTL   G    + ++VL   AV  +ARMQQ+GW YIR+
Sbjct  66   WV--CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

8) AZOLI_p50219 in NC_016624


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 53.4 bits (183),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 53/107 (50%), Positives = 78/107 (73%), Gaps = 3/107 (2%)

Query  4    MTSQPDVP-LRLVIHAPTPaalerarnnarnllkarPDAEVRIVVNAGAVAAALDGPDAE  62
            MT + + P L++++HAPT+ A+ERAR+NA NL +A PDA+VRIV NA AVAAALD + ++
Sbjct  1    MTQDTQRPTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSD  60

Query  63   TDRLLRVCGNTLAKTGRSAQG-LTVVPA-SVLDIAEAQAEGWGYMRA  107
             D L +VC NTL++ GR  +  L V+ + +V+++A  Q  GW Y+RA
Sbjct  61   LDALTWVCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

9) AZL_e02510 in NC_013859


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 51.3 bits (175),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 75/100 (75%), Gaps = 2/100 (2%)

Query  7    SPLRLVIHAPTPaalerarnnarnllkarPDARLRIVVNAGAVAAALDNPDAETDRLLRV  66
            + L++++HAPT+ A+ERAR+NA NL +A PDA +RIV NA AVAAALD + ++ D L +V
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  67   CGNSLAKIGRTA-DGLTVV-AAGVLDIAEAQADGWGYMRA  104
            C N+L++IGR   + L V+ +++V+++A  Q  GW Y+RA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

10) DelCs14_2609 in NC_015563


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 50.8 bits (173),  Expect = 4e-08, Method: Compositional matrix adjust.
 Identities = 45/105 (43%), Positives = 70/105 (67%), Gaps = 7/105 (6%)

Query  28   PLRIVLHAPTPGalararsnlanlrQDRPGAEVRIVINGPAVEALLDAAPGTPQhldaaa  87
             L+++LHAPT+ A+ RARSN +NL++  P+A+VRIV N+ AV A LD+AP+  + L    
Sbjct  9    TLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTW--  66

Query  88   lahalVCPNTLRKLGREAPAGMRVLPQGGIESLALLQQSAWCYVR  132
                 VCPNTL ++GR+    + VL   ++  +A +QQ++W Y+R
Sbjct  67   -----VCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIR  106

11) Daci_4242 in NC_010002


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 49.5 bits (168),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 45/105 (43%), Positives = 70/105 (67%), Gaps = 7/105 (6%)

Query  28   PLRIVLHAPTPGalararsnlanlrQDRPGAEVRIVINGPAVEALLDAAPGTPQhldaaa  87
             L+++LHAPT+ A+ RARSN +NL++  P+A+VRIV N+ AV A LD+AP+  + L    
Sbjct  9    TLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTW--  66

Query  88   lahalVCPNTLRKLGREAPAGMRVLPQGGIESLALLQQSAWCYVR  132
                 VCPNTL ++GR+    + VL   ++  +A +QQ++W Y+R
Sbjct  67   -----VCPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIR  106

12) BN115_2777 in NC_018829


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 48.7 bits (165),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 79/100 (79%), Gaps = 0/100 (0%)

Query  6    SCVRVLLHAPTAGAFERARNNAANLLKEAPGAQVRIvanaaavaaaldapphpadahTWL  65
            + ++V+LHAPTA AFERAR+NA+NL + AP+A+VRIVANA AVAAALD++P   DA TW+
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  66   CPNTlarldrparapqralpqaavlalallqDEGWRYIRA  105
            CPNTL+R++R  R P   L  +AV+ +A +Q+ GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

13) SPISAL_05145 in NC_021291


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 44.8 bits (150),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 48/99 (49%), Positives = 72/99 (73%), Gaps = 1/99 (1%)

Query  2    TLQVVFHAPtaealtrarrnllnfraaePDARLRLIANGPAVPAALDIPDPETDPYLRVC  61
            TL+V++HAPTAEA+ RAR N  N++ A PDA +R++AN+ AV+AALD + ++ D+  +VC
Sbjct  9    TLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWVC  68

Query  62   LNTLQTLGLENTRGLPEV-AAGVVELARCQANGWQYIRA  99
             NTL  +G +N   L  + +++V+E+AR Q  GW YIRA
Sbjct  69   PNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

14) mma_3538 in NC_009659


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 44.0 bits (147),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 42/98 (43%), Positives = 69/98 (71%), Gaps = 2/98 (2%)

Query  2    IRLVIHAPTPEALERGRRNLANLLKAEPDAQVELvanagavvaaL-KNPHESDSHLHLCR  60
            +++++HAPT+EA+ER+R N +NL +A PDA+V +VANA AV AAL   P + D+   +C 
Sbjct  10   LKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWVCP  69

Query  61   NSLQANDLQAPENIav-vaaavLHIAQRQHDGWAYLRA  97
            N+L   + +  E + V  ++AV+++A+ Q+ GW Y+RA
Sbjct  70   NTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

15) Csal_0180 in NC_007963


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 36.9 bits (120),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 73/100 (73%), Gaps = 1/100 (1%)

Query  2    SALRVVLHAPTADGlararrnalnltrarPDTEVLIvangaavaaaldtpdpatdaWLRL  61
            ++L+V+LHAPTA+++ RAR NA NL RA PD++V IVAN+ AVAAALDT+ +  DA  ++
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  62   CRNTLAAQALDNPGGLGEVE-AAVVTLAELQAQGWAYIRA  100
            C NTL+  + DN   L  ++ +AV+ +A +Q  GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

16) BN112_0147 in NC_019382


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 27.4 bits (84),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 80/100 (80%), Gaps = 0/100 (0%)

Query  6    SCVRVLLHAPTagalerarnnaanllkeaPGAQVRIvanaaavaaaldapphpadahTWL  65
            + ++V+LHAPTA A+ERAR+NA+NL + AP+A+VRIVANA AVAAALD++P   DA TW+
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  66   CPNTlarldrparaplralpqaavlalallQDEGWRYIRA  105
            CPNTL+R++R  R PL  L  +AV+ +A +Q+ GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

17) BB2321 in NC_002927


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 26.1 bits (79),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 0/100 (0%)

Query  6    PCVRVLLHAPTagalerarnnaanllkeaPGAQVRIvanaaavaaaldapphpadahTWL  65
            P ++V+LHAPTA A+ERAR+NA+NL + AP+A+VRIVANA AVAAALD++P   DA TW+
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  66   CPNTlarlerparaplralpqaavlalallqeeGWRYIRA  105
            CPNTL+R+ R  R PL  L  +AV+ +A +Q+ GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

18) BPP1253 in NC_002928


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 26.1 bits (79),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 0/100 (0%)

Query  6    PCVRVLLHAPTagalerarnnaanllkeaPGAQVRIvanaaavaaaldapphpadahTWL  65
            P ++V+LHAPTA A+ERAR+NA+NL + AP+A+VRIVANA AVAAALD++P   DA TW+
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  66   CPNTlarlerparaplralpqaavlalallqeeGWRYIRA  105
            CPNTL+R+ R  R PL  L  +AV+ +A +Q+ GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107

19) BN117_2200 in NC_018828


> AF440523|10|G5|24461526|AAN62097.1|Pseudomonas_aeruginosa_C|-|31664..31987|ORF 
C5|-|hypothetical protein
Length=107

 Score = 25.9 bits (78),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 0/100 (0%)

Query  5    PCVRVLLHAPTagalerarnnaanllkeaPGAQVRIvanaaavaaaldapphpadahTWL  64
            P ++V+LHAPTA A+ERAR+NA+NL + AP+A+VRIVANA AVAAALD++P   DA TW+
Sbjct  8    PTLKVILHAPTAEAFERARSNATNLKRAAPDADVRIVANAQAVAAALDTAPSDLDALTWV  67

Query  65   CPNTlarlerparaplralpqaavlalallqeeGWRYIRA  104
            CPNTL+R+ R  R PL  L  +AV+ +A +Q+ GW YIRA
Sbjct  68   CPNTLSRIGRDNREPLEVLDGPAVIEMARMQQAGWIYIRA  107