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PAthogenisity Island DataBase (PAI DB)

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Homologs of tcpH gene of AF325734

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03845 in NC_016944


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  223 bits (829),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

2) tcpH in NC_012578


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  223 bits (829),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

3) VCD_003501 in NC_012668


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  223 bits (829),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

4) tcpH in NC_016445


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  223 bits (829),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

5) VC0827 in NC_002505


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  223 bits (829),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 136/136 (100%), Positives = 136/136 (100%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KLLTAEKMWFSCQSDF  136
            KLLTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

6) tcpH in NC_012582


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  191 bits (708),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYS+SN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136

7) tcpH in NC_009457


> AF325734|10|G10|13377549|AAK20784.1|Vibrio_cholerae_O1_biovar_eltor_str._N16961|+|16478..16888|tcpH|-|toxin-coregulated 
pilus 
biosynthesis protein H
Length=136

 Score =  191 bits (708),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 131/136 (97%), Positives = 134/136 (99%), Gaps = 0/136 (0%)

Query  1    MHKKLKAWggaaglfvvalgvtlIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60
            MHKKLKAWGGA+GLFVVALGVT+IALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
Sbjct  1    MHKKLKAWGGATGLFVVALGVTIIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT  60

Query  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY  120
            QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYS+SN SRDYNVLSIYQLGKGCFLAFPY
Sbjct  61   QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSQSNASRDYNVLSIYQLGKGCFLAFPY  120

Query  121  KQLTAEKMWFSCQSDF  136
            K LTAEKMWFSCQSDF
Sbjct  121  KLLTAEKMWFSCQSDF  136