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Homologs of hrpY gene of AF083877

106

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpY
( YP_003539958.1 )

two-component response regulator

NC_013971
(Erwinia amylovora ATCC 49946)

1e-99

100

2) hrpY
( YP_003529896.1 )

response regulator hrpY

NC_013961
(Erwinia amylovora CFBP1430)

1e-99

100

3) hrpY
( YP_005804081.1 )

Response regulator hrpY

NC_017390
(Erwinia pyrifoliae DSM 12163)

4e-99

4) hrpY
( YP_002650064.1 )

Hrp/hrc secretion/translocation pathway protein HrpY

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-99

5) hrpY
( YP_005818265.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpY protein

NC_017445
(Erwinia sp. Ejp617)

5e-99

6) hrpY
( YP_001906473.1 )

Response regulator HrpY (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

7e-94

7) Dd1591_1895
( YP_003004224.1 )

LuxR family two component transcriptional regulator

NC_012912
(Dickeya zeae Ech1591)

4e-74

8) hrpY
( YP_003883236.1 )

LuxR family transcriptional regulator

NC_014500
(Dickeya dadantii 3937)

1e-73

9) Dd586_1892
( YP_003333456.1 )

LuxR family two component transcriptional regulator

NC_013592
(Dickeya dadantii Ech586)

2e-72

10) hrpY
( YP_050184.1 )

two-component response regulator

NC_004547
(Pectobacterium atrosepticum SCRI1043)

6e-72

11) PC1_2202
( YP_003017777.1 )

LuxR family two component transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

6e-72

12) PCC21_022800
( YP_006646936.1 )

two-component response regulator

NC_018525
(Pectobacterium carotovorum PCC21)

1e-71

13) Ser39006_2909
( YP_008523291.1 )

two component transcriptional regulator, LuxR family

NC_022268
(Serratia sp. ATCC 39006)

4e-69

14) D781_3948
( YP_007346323.1 )

response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

NC_020064
(Serratia marcescens FGI94)

1e-63

15) PSF113_3564
( YP_005208959.1 )

DNA-binding response regulator, LuxR family, near polyamine transporter

NC_016830
(Pseudomonas fluorescens F113)

7e-58

16) PSEBR_a2252
( YP_004353533.1 )

two-component system, response regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

1e-57

17) MDS_4526
( YP_004382309.1 )

two component LuxR family transcriptional regulator

NC_015410
(Pseudomonas mendocina NK-01)

3e-53

18) BC1002_6941
( YP_003610249.1 )

LuxR family transcriptional regulator

NC_014120
(Burkholderia sp. CCGE1002)

7e-50

19) pRALTA_0290
( YP_001796159.1 )

LuxR family response regulator

NC_010529
(Cupriavidus taiwanensis LMG 19424)

9e-50

20) uhpA
( YP_004753295.1 )

LuxR family transcriptional regulator

NC_015856
(Collimonas fungivorans Ter331)

3e-49

21) Bphy_6558
( YP_001862632.1 )

two component LuxR family transcriptional regulator

NC_010625
(Burkholderia phymatum STM815)

4e-49

22) BUPH_04757
( YP_006836496.1 )

two component LuxR family transcriptional regulator

NC_018696
(Burkholderia phenoliruptrix BR3459a)

7e-49

23) Bphy_7764
( YP_001863698.1 )

two component LuxR family transcriptional regulator

NC_010627
(Burkholderia phymatum STM815)

7e-49

24) mma_0909
( YP_001352599.1 )

two-component response regulator

NC_009659
(Janthinobacterium sp. Marseille)

2e-47

25) Psefu_0162
( YP_004472242.1 )

LuxR family transcriptional regulator

NC_015556
(Pseudomonas fulva 12-X)

2e-45

26) AZKH_4187
( YP_007553442.1 )

transcriptional regulator, LuxR family

NC_020516
(Azoarcus sp. KH32C)

2e-45

27) Dsui_3469
( YP_005029639.1 )

response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

NC_016616
(Dechlorosoma suillum PS)

2e-44

28) Thivi_4107
( YP_006416053.1 )

response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

NC_018012
(Thiocystis violascens DSM 198)

3e-44

29) Slit_1593
( YP_003524213.1 )

LuxR family transcriptional regulator

NC_013959
(Sideroxydans lithotrophicus ES-1)

5e-44

30) uvrY2
( YP_008002826.1 )

response regulator UvrY

NC_021237
(Pseudomonas fluorescens CHA0)

1e-43

31) PFL_5640
( YP_262699.1 )

LuxR family transcriptional regulator

NC_004129
(Pseudomonas protegens Pf-5)

1e-43

32) ebA5752
( YP_160291.1 )

two-component response regulator

NC_006513
(Aromatoleum aromaticum EbN1)

1e-43

33) PFLU5569
( YP_002875064.1 )

putative two-component system response regulator

NC_012660
(Pseudomonas fluorescens SBW25)

2e-43

34) H045_18230
( YP_007399204.1 )

putative two-component system response regulator

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-43

35) PputUW4_04929
( YP_007031924.1 )

two component LuxR family transcriptional regulator

NC_019670
(Pseudomonas sp. UW4)

2e-43

36) Pfl01_5126
( YP_350854.1 )

two component LuxR family transcriptional regulator

NC_007492
(Pseudomonas fluorescens Pf0-1)

3e-43

37) PCA10_05480
( YP_008100885.1 )

putative two-component response regulator

NC_021499
(Pseudomonas resinovorans NBRC 106553)

3e-43

38) PSEBR_a5129
( YP_004356584.1 )

NarL family response regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

5e-43

39) PSPPH_0642
( YP_272941.1 )

LuxR family transcriptional regulator

NC_005773
(Pseudomonas syringae 1448A)

5e-43

40) PSF113_5348
( YP_005210715.1 )

DNA-binding response regulator, LuxR family, near polyamine transporter

NC_016830
(Pseudomonas fluorescens F113)

5e-43

41) PSPTO_0560
( NP_790407.1 )

LuxR family DNA-binding response regulator

NC_004578
(Pseudomonas syringae DC3000)

6e-43

42) Psyr_4618
( YP_237686.1 )

LuxR response regulator receiver

NC_007005
(Pseudomonas syringae B728a)

2e-42

43) Psefu_3937
( YP_004475987.1 )

LuxR family transcriptional regulator

NC_015556
(Pseudomonas fulva 12-X)

5e-42

44) G655_03040
( YP_007707457.1 )

putative two-component response regulator

NC_020912
(Pseudomonas aeruginosa B136-33)

8e-42

45) PADK2_03030
( YP_006480601.1 )

two-component response regulator

NC_018080
(Pseudomonas aeruginosa DK2)

8e-42

46) PLES_05981
( YP_002438206.1 )

putative two-component response regulator

NC_011770
(Pseudomonas aeruginosa LESB58)

8e-42

47) PAM18_0602
( YP_005973193.1 )

putative two-component response regulator

NC_017548
(Pseudomonas aeruginosa M18)

8e-42

48) uhpA
( YP_005983782.1 )

putative two-component response regulator

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

8e-42

49) PA0601
( NP_249292.1 )

two-component response regulator

NC_002516
(Pseudomonas aeruginosa PAO1)

8e-42

50) M062_03020
( YP_008131067.1 )

transcriptional regulator

NC_021577
(Pseudomonas aeruginosa RP73)

8e-42

51) uhpA
( YP_788774.1 )

two-component response regulator

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

8e-42

52) PSPA7_0745
( YP_001346140.1 )

putative two-component response regulator

NC_009656
(Pseudomonas aeruginosa PA7)

2e-41

53) Tbd_1290
( YP_315048.1 )

LuxR family transcriptional regulator

NC_007404
(Thiobacillus denitrificans ATCC 25259)

2e-41

54) Marme_1082
( YP_004312193.1 )

LuxR family transcriptional regulator

NC_015276
(Marinomonas mediterranea MMB-1)

3e-40

55) uhpA
( YP_001171282.1 )

DNA-binding response regulator UhpA

NC_009434
(Pseudomonas stutzeri A1501)

2e-39

56) uhpA
( YP_005937335.1 )

DNA-binding response regulator UhpA

NC_017532
(Pseudomonas stutzeri DSM 4166)

2e-39

57) A458_18340
( YP_006459314.1 )

DNA-binding response regulator UhpA

NC_018028
(Pseudomonas stutzeri CCUG 29243)

3e-39

58) Psest_3659
( YP_007241767.1 )

response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

NC_019936
(Pseudomonas stutzeri RCH2)

3e-39

59) Pnap_0790
( YP_981030.1 )

two component LuxR family transcriptional regulator

NC_008781
(Polaromonas naphthalenivorans CJ2)

4e-39

60) Galf_1375
( YP_003847165.1 )

two component transcriptional regulator, LuxR family

NC_014394
(Gallionella capsiferriformans ES-2)

6e-39

61) mma_2916
( YP_001354606.1 )

LuxR family transcriptional regulator

NC_009659
(Janthinobacterium sp. Marseille)

1e-38

62) AZKH_4039
( YP_007553295.1 )

transcriptional regulator, LuxR family

NC_020516
(Azoarcus sp. KH32C)

4e-38

63) uhpA
( YP_004713000.1 )

DNA-binding response regulator UhpA

NC_015740
(Pseudomonas stutzeri ATCC 17588)

5e-38

64) Desaf_2891
( YP_005052862.1 )

two component transcriptional regulator, LuxR family

NC_016629
(Desulfovibrio africanus Walvis Bay)

2e-37

65) Daro_1400
( YP_284619.1 )

LuxR family transcriptional regulator

NC_007298
(Dechloromonas aromatica RCB)

1e-36

66) PputW619_4792
( YP_001751637.1 )

two component LuxR family transcriptional regulator

NC_010501
(Pseudomonas putida W619)

5e-37

67) tcr1
( YP_158338.1 )

two-component response regulator

NC_006513
(Aromatoleum aromaticum EbN1)

6e-37

68) Lcho_1402
( YP_001790435.1 )

two component LuxR family transcriptional regulator

NC_010524
(Leptothrix cholodnii SP-6)

6e-37

69) SYN_01953
( YP_460836.1 )

response regulator

NC_007759
(Syntrophus aciditrophicus SB)

9e-37

70) PP4_04430
( YP_008111480.1 )

putative two-component response regulator

NC_021505
(Pseudomonas putida NBRC 14164)

1e-36

71) PSEEN0437
( YP_606208.1 )

LuxR family DNA-binding response regulator

NC_008027
(Pseudomonas entomophila L48)

5e-36

72) uhpA
( YP_005928347.1 )

UhpA family transcriptional regulator

NC_017530
(Pseudomonas putida BIRD-1)

5e-36

73) L483_02090
( YP_008092270.1 )

transcriptional regulator

NC_021491
(Pseudomonas putida H8234)

5e-36

74) uhpA
( NP_742576.1 )

LuxR family transcriptional regulator

NC_002947
(Pseudomonas putida KT2440)

5e-36

75) Daro_1572
( YP_284791.1 )

LuxR family transcriptional regulator

NC_007298
(Dechloromonas aromatica RCB)

5e-36

76) uvrY
( YP_006532783.1 )

two component LuxR family transcriptional regulator

NC_018220
(Pseudomonas putida DOT-T1E)

6e-36

77) Pput_0444
( YP_001265798.1 )

two component LuxR family transcriptional regulator

NC_009512
(Pseudomonas putida F1)

6e-36

78) PputGB1_0441
( YP_001666688.1 )

two component LuxR family transcriptional regulator

NC_010322
(Pseudomonas putida GB-1)

6e-36

79) YSA_05830
( YP_006387043.1 )

two component LuxR family transcriptional regulator

NC_017986
(Pseudomonas putida ND6)

6e-36

80) H681_02545
( YP_007655931.1 )

putative two-component response regulator

NC_020829
(Pseudomonas denitrificans ATCC 13867)

6e-36

81) B479_02530
( YP_007227365.1 )

two component LuxR family transcriptional regulator

NC_019905
(Pseudomonas putida PC9)

8e-36

82) Mpe_A2902
( YP_001022090.1 )

LuxR family transcriptional regulator

NC_008825
(Methylibium petroleiphilum PM1)

2e-35

83) PPS_0406
( YP_004699871.1 )

two component LuxR family transcriptional regulator

NC_015733
(Pseudomonas putida S16)

6e-35

84) Rmet_0090
( YP_582245.1 )

response regulator, NarL family

NC_007973
(Cupriavidus metallidurans CH34)

6e-35

85) Rfer_1873
( YP_523130.1 )

two component LuxR family transcriptional regulator

NC_007908
(Rhodoferax ferrireducens T118)

1e-34

86) Pmen_4004
( YP_001189483.1 )

two component LuxR family transcriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

9e-34

87) MDS_4342
( YP_004382125.1 )

two component LuxR family transcriptional regulator

NC_015410
(Pseudomonas mendocina NK-01)

2e-33

88) Bpro_4296
( YP_551086.1 )

two component LuxR family transcriptional regulator

NC_007948
(Polaromonas sp. JS666)

6e-33

89) Rta_30840
( YP_004620213.1 )

response regulator NarL

NC_015677
(Ramlibacter tataouinensis TTB310)

6e-33

90) NH44784_047701
( YP_008031835.1 )

DNA-binding response regulator, LuxR family

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-33

91) OCA4_c32690
( YP_005952249.1 )

putative response regulator UvrY

NC_017538
(Oligotropha carboxidovorans OM4)

4e-32

92) OCA5_c33210
( YP_004634237.1 )

response regulator UvrY

NC_015684
(Oligotropha carboxidovorans OM5)

4e-32

93) OCAR_4625
( YP_002287633.1 )

LuxR family two component transcriptional regulator

NC_011386
(Oligotropha carboxidovorans OM5; ATCC 49405)

4e-32

94) Veis_0032
( YP_994843.1 )

two component LuxR family transcriptional regulator

NC_008786
(Verminephrobacter eiseniae EF01-2)

4e-32

95) Bpro_1167
( YP_548016.1 )

two component LuxR family transcriptional regulator

NC_007948
(Polaromonas sp. JS666)

1e-31

96) Palpr_2173
( YP_004043294.1 )

LuxR family transcriptional regulator

NC_014734
(Paludibacter propionicigenes WB4)

6e-31

97) vsrD
( YP_003746958.1 )

LuxR family transcriptional regulator

NC_014307
(Ralstonia solanacearum CFBP2957)

8e-30

98) RSPO_c03113
( YP_006030941.1 )

response regulator, luxr family

NC_017574
(Ralstonia solanacearum Po82)

8e-30

99) F504_312
( YP_007631331.1 )

DNA-binding response regulator, LuxR family

NC_020799
(Ralstonia solanacearum FQY_4)

1e-29

100) vsrD
( NP_518413.1 )

response regulator transcription regulator protein

NC_003295
(Ralstonia solanacearum GMI1000)

1e-29

101) vsrD
( YP_003753732.1 )

response regulator, LuxR family

NC_014311
(Ralstonia solanacearum PSI07)

2e-29

102) JCM7686_pAMI5p060
( YP_008406508.1 )

transcriptional regulator, LuxR family

NC_022043
(Paracoccus aminophilus JCM 7686)

4e-29

103) RGE_10170
( YP_005435857.1 )

LuxR family two component transcriptional regulator

NC_017075
(Rubrivivax gelatinosus IL144)

5e-29

104) Tint_1238
( YP_003642956.1 )

LuxR family transcriptional regulator

NC_014153
(Thiomonas intermedia K12)

9e-27

105) THI_1561
( YP_003624074.1 )

putative two-component regulatory systems

NC_014145
(Thiomonas sp. 3As)

2e-26

106) Dalk_2566
( YP_002431727.1 )

LuxR family transcriptional regulator

NC_011768
(Desulfatibacillum alkenivorans AK-01)

2e-22

• Sequence Alignments

1) hrpY in NC_013971


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  355 bits (1332),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180
            VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213
            KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

2) hrpY in NC_013961


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  355 bits (1332),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180
            VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213
            KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

3) hrpY in NC_017390


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  353 bits (1325),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 211/213 (99%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHVLAEQIVFAEYTHASEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180
            VARGQRFIDHVLAEQIVFAEYT+A+EAMHERLTAREMQIMLMLARGRGVNHIAEALAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213
            KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

4) hrpY in NC_012214


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  353 bits (1325),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 211/213 (99%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHVLAEQIVFAEYTHASEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180
            VARGQRFIDHVLAEQIVFAEYT+A+EAMHERLTAREMQIMLMLARGRGVNHIAEALAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213
            KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

5) hrpY in NC_017445


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  353 bits (1324),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHVLAEQIVFAEYTHAGGAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180
            VARGQRFIDHVLAEQIVFAEYT+AG AMHERLTAREMQIMLMLARGRGVNHIAEALAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213
            KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

6) hrpY in NC_010694


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  335 bits (1258),  Expect = 7e-94, Method: Compositional matrix adjust.
 Identities = 201/213 (95%), Positives = 206/213 (97%), Gaps = 0/213 (0%)

Query  1    MDKNIRLMVADDHVIMREGLKQIFSLDDRLVVVAEAGNGTQVMEGLRVEQVDLLLLDMSM  60
            MDKNIRLMVADDHVIMREGLKQIFSLD+RLVVVAEAGNGTQVMEGLRVE VDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120
            PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VARGQRFIDHILAEQIVFAECTQVGEALHARLTAREMQIMLMLARGEGVNHIAEALKISN  180
            VARGQRFIDH+LAEQIVFAE TQ GEA+H RLTAREMQIMLMLARG GVNHIAEAL ISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKSRLMDKMMFTTNADIVKYAISHRLIT  213
            KTVSTHK+RLM+KMMFTTNADIVKYAISH LIT
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

7) Dd1591_1895 in NC_012912


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  270 bits (1008),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 157/212 (75%), Positives = 186/212 (88%), Gaps = 0/212 (0%)

Query  1    MDRLIKLMIADDHVIMREGLKQIFALDENLEVVAEAGTGSQVLSQLRENQVDLLLLDMSM  60
            MD+ I+LM+ADDHVIMREGLKQIF+LDE L VVAEAG G+QV+  LR + VDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGICGEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRR  120
            PG+CGE+L+ RI  QYP+LPIL+L+MYSEPQIARRVLK GALGYITKD+DPE+LL+AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHSIAEQIVFADCQTRGDGRHELLTSREHQIMVMLAQGLGVNAIAEMLAISN  180
            VA+G R+IDH +AEQIVFA+    G++ HE LT+RE QIM+MLA+G GVN IAE LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKSRLMEKMQFTTNADIVKYALSQRLI  212
            KTVSTHK+RLMEKM FTTNADIVKYA+S+ LI
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

8) hrpY in NC_014500


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  268 bits (1003),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 155/213 (73%), Positives = 186/213 (88%), Gaps = 0/213 (0%)

Query  1    MDRLIKLMIADDHVIMREGLKQIFALDDNLEVVAEAGTGSQVLAQLRESQVDLLLLDMSM  60
            MD+ I+LM+ADDHVIMREGLKQIF+LD+ L VVAEAG G+QV+  LR   VDLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGICGEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRR  120
            PG+CGE+L+ RI  QYP+LPIL+L+MYSEPQIARRVLK GALGYITKD+DPE+LL+AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHSIAEQIVFADCQTRGDGRNELLTSREHQIMVMLAQGLGVNAIAEMLAISN  180
            VA+G R+IDH +AEQIVFA+    G++ +E LT+RE QIM+MLA+G GVN IAE LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKSRLMEKMQFTTNADIVKYALSQRLIA  213
            KTVSTHK+RLMEKM FTTNADIVKYA+S+ LI+
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

9) Dd586_1892 in NC_013592


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  264 bits (987),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 154/212 (73%), Positives = 184/212 (87%), Gaps = 0/212 (0%)

Query  1    MDRLIKLMIADDHVIMREGLKQIFALDESLEVVAEAGTGSQVLSQLRECQVDLLLLDMCM  60
            MD+ I+LM+ADDHVIMREGLKQIF+LDE L VVAEAG G+QV+  LR   VDLLLLDM M
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGICGEELIIRIVAQYPRLPILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRR  120
            PG+CGE+L+ RI  QYP+LPIL+L+MYSEPQIARRVLK GALGYITKD+DPE+LL+AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHSIAEQIVFADCQAQGDGRHDLLTTREHQIMVMLAQGLGVNAIADMLAISN  180
            VA+G R+IDH +AEQIVFA+    G++ H+ LT+RE QIM+MLA+G GVN IA+ LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKSRLMEKMQFTTNADIVKYALSQRLI  212
            KTVSTHK+RLMEKM FTTNADIVKYA+S+ LI
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

10) hrpY in NC_004547


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  263 bits (982),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 147/213 (70%), Positives = 184/213 (87%), Gaps = 0/213 (0%)

Query  1    MDKQIRLMIADDHVIMREGLKQIFALDDSLSVVAEAGNGAQVLAQLRSVAPDLLLLDMSM  60
            MDK+IRLM+ADDHVIMREGLKQIF+LD+ L VVAEAGNG+QV+  LR  + DLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGISGEALISRVVAQYPRLPILVLSMYSEAQIAQHALKSGARGYITKDKDPEALLAAIRR  120
            PG+ GE L++R+  QYP+LPIL+L+MYSE+QIA++ LK GA GYITKD+DPE+LLAAI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHTIAEQLVFSHYTEGGRAEHDVLTAREHQIMIMFAQGMGINTIANELAISN  180
            VA+G R+IDH +AEQ+VF++YT++G A H+ LTARE QIM+M+A+G G+N IA+ LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMQFSTNVEIVKYVFSKKLIP  213
            KTVSTHKARLMEKM F+TN +IVKY +S  LI 
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

11) PC1_2202 in NC_012917


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  262 bits (981),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 146/213 (69%), Positives = 182/213 (86%), Gaps = 0/213 (0%)

Query  1    MGKPIRLMIADDHVIMREGLKQIFALDESLSVVAEAGNGAQVLAQLRSVTPDLLLLDMSM  60
            M+K IRLM+ADDHVIMREGLKQIF+LDE L VVAEAGNG+QV+  LR    DLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGISGEALISRVVAQYPRLPILVLSMYSEAQIAQHALKSGARGYITKDKDPEALLSAIRR  120
            PG+ GE L++R+  QYP+LPIL+L+MYSE+QIA++ LK GA GYITKD+DPE+LL+AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHTIAEQLVFSNYTEGGRAEHDVLTAREHQIMIMFAQGMGINAIANELAISN  180
            VA+G R+IDH +AEQ+VF++YT++G A H+ LTARE QIM+M+A+G G+N IA+ LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMQFSTNVEIVKYVVSKKLIP  213
            KTVSTHKARLMEKM F+TN +IVKY +S  LI 
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

12) PCC21_022800 in NC_018525


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  261 bits (977),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 144/213 (68%), Positives = 182/213 (86%), Gaps = 0/213 (0%)

Query  1    MGKPIRLMIADDHVIMREGLKQIFALDDSLSVVAEAGNGAQVLAQLRSVTPDLLLLDMSM  60
            M+K IRLM+ADDHVIMREGLKQIF+LD+ L VVAEAGNG+QV+  LR    DLLLLDMSM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGISGEALISRVVAQYPRLPILVLSMYSEAQIAQHALKSGARGYITKDKDPEALLSAIRR  120
            PG+ GE L++R+  QYP+LPIL+L+MYSE+QIA++ LK GA GYITKD+DPE+LL+AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAQGARYIDHTIAEQLVFSNYTEGDRAAHDVLTAREHQIMIMFAQGMGINAIANELAISN  180
            VA+G R+IDH +AEQ+VF++YT+++ A H+ LTARE QIM+M+A+G G+N IA+ LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  181  KTVSTHKARLMEKMQFSTNVEIVKYVVSKKLIP  213
            KTVSTHKARLMEKM F+TN +IVKY +S  LI 
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

13) Ser39006_2909 in NC_022268


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  253 bits (945),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 148/211 (71%), Positives = 181/211 (86%), Gaps = 0/211 (0%)

Query  3    KQIRLMIADDHAIMREGLKQIFALDHLLEVVAEAGTGSQVLMKLRSNEIDLLLLDMSMPG  62
            K+IRLM+ADDH IMREGLKQIF+LD+ L VVAEAG G+QV+  LR + +DLLLLDMSMPG
Sbjct  3    KNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPG  62

Query  63   ICGEELIIRIAAQYPRLPILVLSMYSEPQIALRVLKSGAQGYITKDRDPETLLSAIRRVA  122
            +CGE+L+ RI  QYP+LPIL+L+MYSEPQIA RVLK GA GYITKD DPETLL+AI+RVA
Sbjct  63   VCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVA  122

Query  123  QGSRYIDHTIAEQIVFSDTNTHDGGRDERLTPREHQIMIMLAQGMGINAIAEALTISNKT  182
            +G R+IDH +AEQIVF++    + + +ERLT+RE QIM+MLA+G G+N IAEAL+ISNKT
Sbjct  123  RGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKT  182

Query  183  VSTHKSRLMEKMCFITNADIVKYALSRRLVP  213
            VSTHK+RLMEKM F TNADIVKYA+S+ L+ 
Sbjct  183  VSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

14) D781_3948 in NC_020064


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  235 bits (876),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 136/212 (65%), Positives = 172/212 (82%), Gaps = 1/212 (0%)

Query  1    MTQPIRLMIAEDHAIMREGLKQLFLLDAGIKVVAEAADGGRVLERLRAGDVDLLLLDISM  60
            M + IRLM+A+DH IMREGLKQ+F LD  + VVAEA++G +V+E LR   VDLLLLD+SM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  61   PGISGEDLINRISSQHPDLKILVLSMFNEPQIAQRMLEHGALGYITKDRNPEALLNAIRS  120
            PG+ GEDL+ RI  Q P L IL+L+M++EPQIA+R+L  GALGYITKD +PE+LL AI+ 
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  121  VAGGARYIDHELAQKIVFAQY-QSNSAPHENLTLRERQIMIMLAHGESINAIADTLAISN  179
            VA G R+IDH LA++IVFA+Y Q+  A HE LT RE QIM+MLA+G ++N IA++LAISN
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  180  KTVSTYKSRLMKKMGFSANADIVKYAISHNLV  211
            KTVST K+RLM KM F++NADIVKYAISH L+
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

15) PSF113_3564 in NC_016830


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  216 bits (803),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 126/208 (61%), Positives = 167/208 (81%), Gaps = 0/208 (0%)

Query  2    IRLMVADDHTIMREGLKQLFALVKDFSVVAEAENGAQVLELLRHTDVDVLLLDMTMPGSS  61
            IRLMVADDH IMREGLKQ+F+L   + VVAEA NG+QV+E LR   VD+LLLDM+MPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GEDLIGRIHAHYPKLPMLILSMHNEAHIAQRALRAGASGYMTKDRDPEALLAAIRKVSTG  121
            GEDL+ RIH +YPKLP+LIL+M +E++IA+R L+ GA GY+TKD DPE+LLAAI++V+ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  ARYLDPQLAEQIALQSSGVTPENAAQSLTSREFQILRMLAQGLSVNQIAEQLVISNKTVS  181
             R++D  LAEQI +     + E   + LT+RE QI+ MLA+G +VN+IAE L ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKTRLMEKMCFATSTDLVRYALNEGLV  209
            THK+RLMEKM F+T++D+V+YA+++ L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

16) PSEBR_a2252 in NC_015379


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  215 bits (799),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 126/208 (61%), Positives = 166/208 (80%), Gaps = 0/208 (0%)

Query  2    IRLMVADDHTIMREGLKQLFALVKDFSVVAEAENGVQVLELLRHTDVDVLLLDMTMPGSS  61
            IRLMVADDH IMREGLKQ+F+L   + VVAEA NG QV+E LR   VD+LLLDM+MPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GEDLIGRIHAHYPKLPMLILSMHNEAHIAQRALRAGASGYMTKDRDPEALLAAIRKVSTG  121
            GEDL+ RIH +YPKLP+LIL+M +E++IA+R L+ GA GY+TKD DPE+LLAAI++V+ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  ARYLDPQLAEQIALQSSGVTPENAAQSLTSREFQILRMLAQGLSVNQIAEQLVISNKTVS  181
             R++D  LAEQI +     + E   + LT+RE QI+ MLA+G +VN+IAE L ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKTRLMEKMCFATSTDLVRYALNEGLV  209
            THK+RLMEKM F+T++D+V+YA+++ L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

17) MDS_4526 in NC_015410


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  200 bits (745),  Expect = 3e-53, Method: Compositional matrix adjust.
 Identities = 110/202 (55%), Positives = 152/202 (76%), Gaps = 0/202 (0%)

Query  2    INLMIVDDHMIMREGLKRLFELDKDIHIAAEAADGLQALERLRTKHVDLLLLDISMPGLS  61
            I LM+ DDH+IMREGLK++F LD  + + AEA++G Q +E LR   VDLLLLD+SMPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GEALISRLIHQYPRLPILVLSMHSDPHVAMRVLRSGATGYLTKTQSPETLIAAVKKVSTG  121
            GE L++R+  QYP+LPIL+L+M S+P++A RVL+ GA GY+TK + PETL+AA+ +V+ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  ARYIDPELLEQIALNSLKSNPSSGLDSLTNREFQIMRLLADGHSINQIAEQLMISNKTVS  181
             R+ID  L EQI +        +  + LT RE QIM +LA G+++N+IAE L ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKINLMQKMGFSSNADLIKFA  203
            THK  LM+KM F++NAD++K+A
Sbjct  185  THKARLMEKMMFTTNADIVKYA  206

18) BC1003_5193 in NC_014540


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 106/209 (51%), Positives = 160/209 (77%), Gaps = 1/209 (0%)

Query  2    INLLIADDHPLVRGGLKQIIETTPDIVVAGEAAQGSEVIEKLRTCQVDLLLLDMTMPGIS  61
            I L++ADDH ++R GLKQI+     +VV +EA++G++V+E LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRAERPSLPLLVLSIHNEAQVVSRALRAGATGYVTKDSNPDVLLAAIRRLAEG  121
            G DL+ R++ + P LP+L+L++ +E+Q+  R L+ GA GY+TKD++P+ LLAAI+R+A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVEGIVFETYSGDAPP-HEILSDREFQVLQMLALGKSLNEIAEAFALSAKTIS  180
             RFID  L E IVF  Y+  + + HE L+ RE Q++ MLA G+++N+IAEA+A+S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKMRLMQKLGLANNADLIRYAIRHGLVA  209
            THK RLM+K+ ++ NAD+++YAI H L++
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

19) BC1001_4221 in NC_015137


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  190 bits (706),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 104/209 (50%), Positives = 160/209 (77%), Gaps = 1/209 (0%)

Query  2    INLLIADDHPLVRGGLKQIIETTPDIVVAGEAAQGSEVIEKLRSCQVDLLLLDMTMPGIS  61
            I L++ADDH ++R GLKQI+     +VV +EA++G++V+E LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRAERPSLPVLVLSIHNEAQVVSRALRAGATGYVTKDSNPDVLLAAIRKLAEG  121
            G DL+ R++ + P LP+L+L++ +E+Q+  R L+ GA GY+TKD++P+ LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVEGIVFETYSGDAPP-HEILSDREFQVLQMLALGKSLNEIADAFALSAKTIS  180
             RFID  L E IVF  Y+  + + HE L+ RE Q++ MLA G+++N+IA+A+A+S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKMRLMQKLGLANNADLIRYAIRHGLVA  209
            THK RLM+K+ ++ NAD+++YAI H L++
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

20) BUPH_00803 in NC_018672


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  190 bits (706),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 104/209 (50%), Positives = 160/209 (77%), Gaps = 1/209 (0%)

Query  2    INLLIADDHPLVRGGLKQIIETTPDIVVAGEAAQGSEVIEKLRSCQVDLLLLDMTMPGIS  61
            I L++ADDH ++R GLKQI+     +VV +EA++G++V+E LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRAERPSLPVLVLSIHNEAQVVSRALRAGATGYVTKDSNPDVLLAAIRKLAEG  121
            G DL+ R++ + P LP+L+L++ +E+Q+  R L+ GA GY+TKD++P+ LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVEGIVFETYSGDAPP-HEILSDREFQVLQMLALGKSLNEIADAFALSAKTIS  180
             RFID  L E IVF  Y+  + + HE L+ RE Q++ MLA G+++N+IA+A+A+S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKMRLMQKLGLANNADLIRYAIRHGLVA  209
            THK RLM+K+ ++ NAD+++YAI H L++
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

21) BC1002_6941 in NC_014120


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  189 bits (702),  Expect = 7e-50, Method: Compositional matrix adjust.
 Identities = 103/209 (50%), Positives = 161/209 (78%), Gaps = 1/209 (0%)

Query  2    IRILIADDHAIVRGGLRQIIATTSDIVVVAEAAQGSEVIDGLRSRAVDLLLLDMTMPGIS  61
            IR+++ADDH I+R GL+QI++    +VVVAEA++G++V++GLR  +VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIVLIRRVRAEHPSLPVLVLSIHDEAQVASRALRAGATGYLTKDSDPEVLLAAIRKLAEG  121
            G  L+ R++ + P LP+L+L++  E+Q+A R L+ GA GY+TKD+DPE LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFLDPKLVDALVF-DTQRDDVPPHKVLSDREFQVLQMLAAGRSINEIAETCTLSAKTIS  180
             RF+D  L + +VF +  + + + H  L+ RE Q++ MLA GR++N+IAE+ ++S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKMRLMRKLGLSNNAELIRYAIRHGLIA  209
            THK RLM K+ ++ NA++++YAI H LI+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

22) pRALTA_0290 in NC_010529


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  189 bits (701),  Expect = 9e-50, Method: Compositional matrix adjust.
 Identities = 99/205 (49%), Positives = 153/205 (75%), Gaps = 1/205 (0%)

Query  2    IRVLIAEDHAIVRSGLKQIVATTTDIVVSGEAADGAAALEQLRTGEFNLLLLDMTMPGIS  61
            IR+++A+DH I+R GLKQI +    +VV +EA++G+  +E LR    +LLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDLIRRVRLEWPSLVILVLSMHNEAQVASRALRAGASGYVTKDSDPEILLGAIRKLAAG  121
            G DL+ R++L+ P L IL+L+M +E+Q+A R L+ GA GY+TKD+DPE LL+AI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GKFIDPALVDAMVFHQ-RGTDAPAHEVLSDREFQVLQRLATGQTVNEIAESLSLSAKTIS  180
             +FID  L + +VF +   ++ + HE L+ RE Q++  LA G+ VN+IAE+L++S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKMRLMQKLGLQNNAELIRYAIRH  205
            THK RLM+K+ +  NA++++YAI H
Sbjct  185  THKARLMEKMMFTTNADIVKYAISH  209

23) uhpA in NC_015856


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  187 bits (693),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 114/208 (55%), Positives = 158/208 (76%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHAIMREGLKQLFALGKEVAVAEEAVNGGQVLDALQTGGIDLVLLDMTMPGVS  61
            IR+++ADDH IMREGLKQ+F+L+  + V  EA NG QV+++L+   +DL+LLDM+MPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVNLIQRIRAHESNPPILVLSMHNELPIarralaagaagYLTKDNKPEILMAAIRKVVAG  121
            G +L+ RI+ + ++ PIL+L+M +E  IARR L  GA GY+TKDN PE L+AAI++V  G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPELAEQMVFESSSSDQRPPHELLSDREFHILRLLVRGKSVNEVAEELAISNKTVS  181
             RFID  LAEQ+VF   +    + HE L+ RE +I+ +L RG++VN++AE LAISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKMNFQNNAELVRYAVTYNLI  209
            THKARLM+KM F  NA++V+YA++  LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

24) Bphy_6558 in NC_010625


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  187 bits (692),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 105/209 (51%), Positives = 162/209 (78%), Gaps = 3/209 (1%)

Query  2    IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEVVDKLRTCAVDLLLLDMTMPGIS  61
            IR+++ADDH I+R GLKQI++  + +VV AEA++G++V++ LR  +VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLADG  121
            G DL+ R++ + P LP+L+L++  E+Q+A R L+ GA GY+TKD+DP+ LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVDAMVFE--THRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKTI  179
             RFID  L + +VF   T+ G+ + HE L+ RE Q++ MLA G+++N+IA+  A+S KT+
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGE-AMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  180  STHKMRLMQKLGLANNAEVIRYAIRHGLI  208
            STHK RLM+K+ ++ NA++++YAI H LI
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

25) BUPH_04757 in NC_018696


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  186 bits (689),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 105/209 (51%), Positives = 161/209 (78%), Gaps = 3/209 (1%)

Query  2    IRILIADDHAIVRGGLRQIIATTSDIIVAAEAVQGTEVIDRLRSCVVDLLLLDMTMPGIS  61
            IR+++ADDH I+R GL+QI++    ++V AEA +GT+V++ LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRVEQPSLPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLTDG  121
            G DL+ R++++ P LP+L+L++  E+Q+A R L+ GA GY+TKD+DP+ LLAAI++++ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVDGMIFE--TQRGDVPPHEVLSDREFQVLQMLAAGRSINEIADACALSAKTI  179
             RFID  L + ++F   TQ G+ + HE L+ RE Q++ MLA GR++N+IA+A A+S KT+
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGE-AMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  180  STYKTRLMQKLGFSNNAEVIRYAIRHGLI  208
            ST K+RLM+K+ F+ NA++++YAI H LI
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

26) Bphy_7764 in NC_010627


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  186 bits (689),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 105/209 (51%), Positives = 161/209 (78%), Gaps = 3/209 (1%)

Query  2    IRILIADDHAIVRGGLRQIIATTSDIIVAAEAVQGTEVIDRLRSCVVDLLLLDMTMPGIS  61
            IR+++ADDH I+R GL+QI++    ++V AEA +GT+V++ LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRVEQPSLPVLVLSIHDEAQVASRALRAGATGYLTKDSDPDVLLAAIRKLTDG  121
            G DL+ R++++ P LP+L+L++  E+Q+A R L+ GA GY+TKD+DP+ LLAAI++++ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVDGMIFE--TQRGDVPPHEVLSDREFQVLQMLAAGRSINEIADACALSAKTI  179
             RFID  L + ++F   TQ G+ + HE L+ RE Q++ MLA GR++N+IA+A A+S KT+
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGE-AMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  180  STYKTRLMQKLGFSNNAEVIRYAIRHGLI  208
            ST K+RLM+K+ F+ NA++++YAI H LI
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

27) BC1002_5987 in NC_014119


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  185 bits (687),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 103/210 (50%), Positives = 163/210 (78%), Gaps = 3/210 (1%)

Query  2    IKILIADDHAIVRGGLKQIIATTADMIVVEEAGHGSEVIDKLRSCDIDLLLLDMTMPGIS  61
            I++++ADDH I+R GLKQI++    ++VV EAG+G++V++ LR   +DLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRSDRPGLPLLVLSIHNEAQVASRALRAGATGYVTKDSDPDVLLAAIRKLADG  121
            G DL+ R++ + P LP+L+L++ +E+Q+A R L+ GA GY+TKD+DP+ LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVDAMVFE--KHAGDVPPHEVLTDREFQVLQLIASGQSINDIAEACSLSAKTI  179
             RFID  L + +VF    +AG+ + HE LT RE Q++ ++A G+++N+IAEA ++S KT+
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGE-AMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  180  STHKMRLMQKLGLSNNAEVIRYAIRHGLIS  209
            STHK RLM+K+ ++ NA++++YAI H LI+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLIT  213

28) Bphyt_6235 in NC_010676


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  182 bits (676),  Expect = 8e-48, Method: Compositional matrix adjust.
 Identities = 101/210 (49%), Positives = 160/210 (77%), Gaps = 3/210 (1%)

Query  2    IDVLIADDHAVVRGGLKQIIATTTDIVVAAEAAQGSEVLDRLRARRFDLVLLDMTMPGIS  61
            I +++ADDH ++R GLKQI++    +VV AEA++G++V++ LR    DL+LLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRAEQPPLPILVLSIHNEAQVVSRALRAGATGYVTKDSDPDVLLAAIRKLAGG  121
            G DL+ R++ + P LPIL+L++ +E+Q+  R L+ GA GY+TKD+DP+ LLAAI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPKLVDAMVFE--THSGDAPPHEVLSDREFQVLQMLAAGQSINEIAESCSLSAKTI  179
             RFID  L + +VF   T++G+A  HE L+ RE Q++ MLA G+++N+IAE+ ++S KT+
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEA-MHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  180  STHKMRLMQKLGLNNNAELIRYAVRHGLVT  209
            STHK RLM+K+ +  NA++++YA+ H L+T
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLIT  213

29) mma_0909 in NC_009659


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  181 bits (671),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 109/208 (53%), Positives = 154/208 (75%), Gaps = 1/208 (0%)

Query  2    LRILMADDHALMREGLKHLFSVVGGIDVVAEASTGPQVFELLRRTDVDLILLDMTMPGIS  61
            +R+++ADDH +MREGLK++FS+   + VVAEA+ G QV E LR   VDL+LLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GATLIHHIRSQKTAPNILVLSMHDEVQFARRALDAGASGYITKDTDPQTLIDAIHRVAEG  121
            G  L+ +I+ Q     IL+L+M  E Q+ARR L  GA GYITKD DP+TL+ AIHRVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFISRGLAEEMLF-DHGTRARPSHELLSTREYEIFQLLVHGRGVNEIADELSISNKTVS  180
             RFI + LAE+++F +    + + HE L++RE +I  +L +GRGVN+IA+ L+ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKTRLMEKMKCENVSQLIRYAIAHGML  208
            THK+RLMEKM     +++++YAI+H ++
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

30) Psefu_0162 in NC_015556


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 109/204 (54%), Positives = 155/204 (76%), Gaps = 0/204 (0%)

Query  2    IKLLIADDHALMRAGLKRLFEFYDDIRVIAEAADGAQALEKLRSAMVDLLLLDISMPGLS  61
            I+L++ADDH +MR GLK++F + + + V+AEA++G+Q +E LR   VDLLLLD+SMPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GEALITRISHQYPKVPVLVLSMHNDPQlalralrsgaagylTKGQSPEVLIEAVRKVSTG  121
            GE L+TRI  QYPK+P+L+L+M ++PQ+A R L+ GA GY+TK++ PE L+ A+++V+ G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  NRFIDPELIEPIALSSLKPANRSGLDSLTNREFQIMRLLAAGLSVNHIAKQLTISNKTVS  181
            +RFID  L E I ++    A  +  + LT RE QIM +LA G +VNHIA  L+ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKINLMEKMHFATNADLIRFASS  205
            THK  LMEKM F+TNAD++++A S
Sbjct  185  THKARLMEKMMFTTNADIVKYAIS  208

31) AZKH_4187 in NC_020516


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  175 bits (647),  Expect = 2e-45, Method: Compositional matrix adjust.
 Identities = 97/209 (47%), Positives = 152/209 (73%), Gaps = 1/209 (0%)

Query  2    IRLLIADDHAIVRSGLRQIIATTSDLQVVAEAGDGAAVLTAVRGGGCDLLVMDMTMPGLS  61
            IRL++ADDH I+R GL+QI++    L VVAEAG+G+ V+ ++R    DLL++DM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRVRTERPTLPILVLSMHNEGQVVSRALKAGAAGYVAKDCDPDVLLSAMRKVAGG  121
            G DL+ R++ + P LPIL+L+M +E Q+  R LK GA GY++KD DP+ LL+A+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFLDPALVDAMVFDSGPADIDTPPLDILSDREYQVLQLVASGQSLNDIGERLNVSAKTV  181
             RF+D  L + +VF       ++   + L+ RE Q++ ++A G+++N+I+E L +S KTV
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMH-ERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  STHKARLMQKLGIDNNAELVRYAMRHGLL  210
            STHKARLM+K+ +  NA++V+YA+ H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

32) Dsui_3469 in NC_016616


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  171 bits (634),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 96/207 (47%), Positives = 153/207 (74%), Gaps = 2/207 (0%)

Query  2    IRILLADDHSIVRSGLKQLLATEADLEVAGEASQGSEVLTRLRQGGIDLLLMDMSMPGIS  61
            IR+++ADDH I+R GLKQ+++ +  L V +EA++G++V+  LR   +DLLL+DMSMPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLDLIRRAHTEAPEVPVVVLSMHNESQLVSRALRAGASGYVTKDSDPAILLAAIRKVARG  121
            G DL+ R H + P +P+++L+M +E+Q+  R L+ GA GY+TKD+DP  LLAAI++VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRFIDPALVDAMVFG--APEEAPPHEALSDREFEvlqllsqglalaavgERLHVSAKTVS  179
             RFID  L + +VF+  +    + HE L+ RE +++ +L++G ++  ++E L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  180  THKTRLMQKLGIDNNAELVRYALRHGL  206
            THK+RLM+K+ +  NA++V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

33) Thivi_4107 in NC_018012


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  170 bits (630),  Expect = 3e-44, Method: Compositional matrix adjust.
 Identities = 101/209 (49%), Positives = 155/209 (75%), Gaps = 0/209 (0%)

Query  2    IRLLIADDHAVVRQGLLQILALNEDIRVVGEVADGWQVIDWLRTADCDLLLTDMSMPGPN  61
            IRL++ADDH ++R+GL QI++L+E + VV+E ++G QV++ LR    DLLL DMSMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIALVKRVKEEHPGLPVLVLTIHGESQIAARVLKAGAGGYVTKDSEPAILLAAVRQVASG  121
            G  LV R+  + P LP+L+LT+ +E+QIA RVLK GA GY+TKD++P  LLAA+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GHFVSSDLAQRLVFETGLAGDVPPCERLSDREYDIFLRIVQGKRLSEIAEALHVSPKTVS  181
             +F+   LA+++VF     ++ +  ERL+ RE +I L + +G+ +++IAEAL +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKMRLMQKLDVKSNTELMRYAIQHGLMS  210
            THK RLM+K+   +N+++++YAI H L++
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

34) Slit_1593 in NC_013959


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 109/208 (53%), Positives = 156/208 (75%), Gaps = 1/208 (0%)

Query  2    IRVFIADDHAIVREGLKQLFTLSG-ISMAGEATNGAQLLESLRKVQVDLLLLDMTMPGIS  60
            IR+ +ADDH I+REGLKQ+F+L   + + +EA NG+Q++E+LR   VDLLLLDM+MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  61   GVELIERIRAQDPQLPILVLSMHNEPQiarraliagaagYCTKDSDPEVLIEAIRKVASG  120
            G +L+ RI+ Q P+LPIL+L+M +EPQIARR L  GA GY TKD+DPE L+ AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  121  GRFIAPSLAEKMAFDTGQHAQYLPREVLSEREYTILHLLVQGKSVNEVAAELVISNKTVS  180
             RFI   LAE++ F    +A    +E L+ RE  I+ +L +G++VN++A  L ISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKARLMQKLNLQNNAELIRYGVEHGLV  208
            THKARLM+K+ +  NA++++Y++ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

35) uvrY2 in NC_021237


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 103/208 (50%), Positives = 153/208 (74%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRQVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   LVVV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSNPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPSLLLTAIRKVASG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

36) PFL_5640 in NC_004129


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 103/208 (50%), Positives = 153/208 (74%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRQVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   LVVV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSNPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPSLLLTAIRKVASG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

37) nreC in NC_015726


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  169 bits (624),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 103/211 (49%), Positives = 156/211 (74%), Gaps = 4/211 (1%)

Query  2    IRLMLADDHTIIRDGLKKIFSTVPDMQVVAEAADGCEVLALLRAQAPDVLLLDMSMPGRS  61
            IRLM+ADDH I+R+GLK+IFS    + VVAEA++G +V+  LR ++ D+LLLDMSMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GILLIQQIRASHPALPILVLSMYRESQYAVQAIRAGAAGYLTKNVESDQLLGAIRKVARG  121
            G  L+ +I+   P LPIL+L+MY E+Q A + ++ GA GY+TK+ +++ LL+AI++VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GTAVSPAIADKLVSQ--ARQPDAMLPHARLTARELQVFQMLAEGQGINEIAAALSLSAKT  179
               +   +A+++V    ++  +AM  H RLTARE+Q+  MLA G+G+N+IA AL++S KT
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAM--HERLTAREMQIMLMLARGRGVNHIAEALAISNKT  182

Query  180  VSTHKANILGKMDIASTAGLVHYAIRHGLLA  210
            VSTHKA ++ KM +++ A++V YAI H L++
Sbjct  183  VSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

38) ebA5752 in NC_006513


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  168 bits (623),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 98/202 (49%), Positives = 151/202 (75%), Gaps = 1/202 (0%)

Query  2    IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVLAAIKTCNAHVLLLDMSMPGLS  61
            IR++VADDH ++REGLK  ++  + + VVAEA NG +V+ +++    ++LLLDMSMPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGASGYVTKGKGREILLSAIRKVASG  121
            G DLV R+  + P LPIL+L+MY+E Q+A +VL+ GA GY+TK+++ E LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  HRYIDPDLAEKILF-DVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKTVS  180
            +R+ID  LAE+I+F +   +  +++E+LT RE QI+ ML  G++V +IA+ L++S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  181  THKIRAMQKLHCQNNVELLKYA  202
            THK R M+K+    N +++KYA
Sbjct  185  THKARLMEKMMFTTNADIVKYA  206

39) PFLU5569 in NC_012660


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 154/208 (75%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLETLRHVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L+VV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIARIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLTAIRKVAAG  121
            G + ++RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

40) H045_18230 in NC_020209


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 155/208 (75%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLETLRHVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L+VV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIARIRALNDPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLAAIRKVAAG  121
            G + ++RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LLAAI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDSRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSNKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLHITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

41) PputUW4_04929 in NC_019670


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  168 bits (622),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 154/208 (75%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLDTLRHVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L+VV+EA+NG Q+++ LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLTAIRKVASG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPELADRMVFEVGLTDSRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

42) h16_A0781 in NC_008313


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 102/211 (49%), Positives = 155/211 (74%), Gaps = 4/211 (1%)

Query  2    IRLMLADDHTIIRDGLKKIFSTVPDMQVVAEAADGCEVLALLRAQTPDVLLLDMSMPGRS  61
            IRLM+ADDH I+R+GLK+IFS    + VVAEA++G +V+  LR +  D+LLLDMSMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GILLIQQIRAGYPALPILVLSMYRESQYAVQAIRAGAAGYLTKNVESDQLLGAIRKVARG  121
            G  L+ +I+  YP LPIL+L+MY E+Q A + ++ GA GY+TK+ +++ LL+AI++VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GTAVSPAIADKLLSQ--ARQPDAMLPHARLTARELQVFQMLAEGLGINEVAAALSLSAKT  179
               +   +A++++    ++  +AM  H RLTARE+Q+  MLA G G+N++A AL++S KT
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAM--HERLTAREMQIMLMLARGRGVNHIAEALAISNKT  182

Query  180  VSTHKANILGKMDIASTAGLVHYAIRHGLLA  210
            VSTHKA ++ KM +++ A++V YAI H L++
Sbjct  183  VSTHKARLMEKMMFTTNADIVKYAISHCLIT  213

43) Pfl01_5126 in NC_007492


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  167 bits (619),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 104/209 (50%), Positives = 156/209 (75%), Gaps = 2/209 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLQVVGEASNGEQLLETLRNVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L VV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNHPP-AILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRKVAA  120
            G + + RI+ L+ P  +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA 
Sbjct  65   GEDLVTRIH-LQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  121  GGRYIDPELADRMVFEVGLTDARPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI  180
            G R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  181  STHKARLMQKLNITSLAELVKYAMEHKLL  209
            STHKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

44) PCA10_05480 in NC_021499


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  167 bits (617),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLCVAGEAGNGEQLMEVLRQTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L V +EAGNG Q+ME LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSNPPAVLVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRKVAAG  121
            G + + RI+      ++L+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPELADRMVFEVGLTDARPSHTLLSEREFSVFERLVRGEGVNEIAQQLAVSSKTVS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L RG GVN+IA+ LA+S+KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLGLHSVADLVKYAVEHKLL  209
            THKARLM+K+ + + AD+VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

45) PSEBR_a5129 in NC_015379


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  167 bits (616),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 103/208 (50%), Positives = 152/208 (74%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRHVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   LVVV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLMAIRKVAAG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

46) PSPPH_0642 in NC_005773


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  167 bits (616),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 103/208 (50%), Positives = 154/208 (75%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLARDLQVVGEASNGEQLLETLRHVACEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L VV+EA+NG Q++E LR  + +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALASPPAILVLSMHNEAQMAARALKVGAAGYATKDSDPALLLTAIRRVAAG  121
            G + + RI+   +  +IL+L+M +E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDSRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKMKLNSLADLVKYAMEHKLL  209
            THKARLM+KM + + AD+VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

47) PSF113_5348 in NC_016830


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  166 bits (615),  Expect = 5e-43, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 152/208 (74%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLDTLRHVPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   LVVV+EA+NG Q+++ LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLMAIRKVAAG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDTRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNITSLAELVKYAMEHKLL  209
            THKARLM+K+ +T+ A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

48) PSPTO_0560 in NC_004578


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  166 bits (614),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 105/209 (51%), Positives = 155/209 (75%), Gaps = 2/209 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLARDLQVVGEASNGEQLLETLRHVACEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L VV+EA+NG Q++E LR  + +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALTHPP-AILVLSMHNEAQMAARALKVGAAGYATKDSDPALLLTAIRRVAA  120
            G + + RI+ L  P  +IL+L+M +E+Q+A R LK GA GY TKD+DP  LL+AI+RVA 
Sbjct  65   GEDLVTRIH-LQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  121  GGRYIDPDLADRMVFEVGLTDSRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI  180
            G R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  181  STHKARLMQKMKLNSLADLVKYAMEHKLL  209
            STHKARLM+KM + + AD+VKYA+ H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

49) Psyr_4618 in NC_007005


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  165 bits (609),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 105/209 (51%), Positives = 154/209 (74%), Gaps = 2/209 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLARDLQVVGEASNGEQLLETLRHVACEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   L VV+EA+NG Q++E LR  + +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRILALTNPP-AILVLSMHNEAQMAARALKVGAAGYATKDSDPALLLTAIRRVAA  120
            G + + RI  L  P  +IL+L+M +E+Q+A R LK GA GY TKD+DP  LL+AI+RVA 
Sbjct  65   GEDLVTRI-HLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  121  GGRYIDPDLADRMVFEVGLTDSRPLHSLLSEREFSVFERLAQGANVNDIAQQLALSSKTI  180
            G R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  181  STHKARLMQKMKLNSLADLVKYAMEHKLL  209
            STHKARLM+KM + + AD+VKYA+ H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

50) Psefu_3937 in NC_015556


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  163 bits (602),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 100/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMARDLQVVGEASNGEQLLETLRQTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L VV+EA+NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSQAPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRKVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGEGVNEIAAHLALSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G GVN+IA  LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNLHSVADLVRYAVEHKLV  209
            THKARLM+K+ + + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

51) G655_03040 in NC_020912


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNAHSVADLVRYAMEHRLL  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

52) PADK2_03030 in NC_018080


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNAHSVADLVRYAMEHRLL  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

53) PLES_05981 in NC_011770


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

54) PAM18_0602 in NC_017548


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

55) uhpA in NC_017549


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

56) PA0601 in NC_002516


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

57) M062_03020 in NC_021577


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

58) uhpA in NC_008463


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  162 bits (600),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALNEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTIS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

59) PSPA7_0745 in NC_009656


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  161 bits (595),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  3    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEKLLETLRGTPCEVVLLDISMPGVN  62
            IR++VA+DH I+REG+KQ++++   L VV+EA NG +++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GLEAIPRIRALSEPPAILVLSMHDEAQMAARALKIGAAGYATKDSDPALLLTAIRRVAGG  122
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  GRYIDPDLADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGANVNEIAQQLAVSNKTVS  182
             R+ID  LA+++VF      + + H  L+ RE  +   L +G  VN+IA+ LA+SNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKARLMQKLNAHSVADLVRYAMEHRLL  210
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

60) Tbd_1290 in NC_007404


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  161 bits (595),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 97/208 (47%), Positives = 160/208 (77%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHAVVRQGLRHVLSASPDIVVAAEAADGFEVLEKIRKEAFDLVCLDLSMPNLS  61
            IR+++ADDH ++R+GL++++S    +VV AEA++G +V+E +R E+ DL+ LD+SMP + 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDLIKRIRLDCTTLPILVLSMHNEaqfaaralkagaaGYLTKDSDPETLIGAIRKVASG  121
            G DL+ RI+L+   LPIL+L+M +E+Q+A R LK GA GY+TKD+DPETL++AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RKFIDPTLVDELIFEKILTDERAPHEQLSDREFQIVRLIAQGESLNQIADKLSLSAKTIS  181
            ++FID  L ++++F        A HE+L+ RE QI+ ++A+G ++N+IA+ L++S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYKARSMQKLGISNHTELVRYAIAHHWI  209
            T KAR M+K+ ++ ++++V+YAI+H  I
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

61) Marme_1082 in NC_015276


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 90/209 (44%), Positives = 150/209 (72%), Gaps = 1/209 (0%)

Query  2    SIKLLITDDHSIVREGLKQLFCLYDDIDVIDEADSGDALLKKLKYLKPDVVTLDMVMPGK  61
            +I+L+++DDH I+REGLKQ+F L + + V+ EA++G  ++  L+    D++ LDM MPG 
Sbjct  4    NIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGV  63

Query  62   CGIELIEEISEKHPDTPLLILSMHNEAQVTRGSLRAGAQGYLSKDCDASTLIEAVRKLAS  121
            CG +L+  I  + P  P+LIL+M +E+Q++R  L+ GA GY++KD D+ TL+ A++++A 
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GGRYIHSDVAEKLAF-ELEPEKAPKHENLSKREFHVFCQLAKGFSITDIAHELSISKKTV  180
            G R+I+  +AE++ F E      + HE L+ RE ++   LA+G ++ +IA+ L+IS+KTV
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  181  STHKFRLMQKMDFSSHSEIVRYALNYELI  209
            STHK RLM+KM F+++++IV+YA++  LI
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

62) uhpA in NC_009434


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 95/208 (46%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVMVAEDHTIVREGIKQLIGMARDMQVVGEAANGQQLLDQLRQVSCDVVLLDLSMPGVN  61
            IR+MVA+DH I+REG+KQ++++   + VV+EA+NG Q+++ LR  + D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSQPPAVLVLSMHDEAQMAARALKIGAAGYATKDSEPALLLTALRKVAGG  121
            G + + RI+      ++L+L+M  E+Q+A R LK GA GY TKD++P  LL+A+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G +VN+IA  LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLAAHSVADLVRYAMEHKLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

63) uhpA in NC_017532


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  155 bits (571),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 95/208 (46%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVMVAEDHTIVREGIKQLIGMARDMQVVGEAANGQQLLDQLRQVSCDVVLLDLSMPGVN  61
            IR+MVA+DH I+REG+KQ++++   + VV+EA+NG Q+++ LR  + D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSQPPAVLVLSMHDEAQMAARALKIGAAGYATKDSEPALLLTALRKVAGG  121
            G + + RI+      ++L+L+M  E+Q+A R LK GA GY TKD++P  LL+A+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G +VN+IA  LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLAAHSVADLVRYAMEHKLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

64) A458_18340 in NC_018028


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 95/208 (46%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVMVAEDHTIVREGIKQLIGMARDMQVVGEAANGQQLLDQLRQISCDVVLLDISMPGVN  61
            IR+MVA+DH I+REG+KQ++++   + VV+EA+NG Q+++ LR  + D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSQPPAVLVLSMHDEAQMAARALKIGAAGYATKDSEPALLLTALRKVAGG  121
            G + + RI+      ++L+L+M  E+Q+A R LK GA GY TKD++P  LL+A+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G +VN+IA  LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLAAHSVADLVRYAMEHKLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

65) Psest_3659 in NC_019936


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  154 bits (567),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 94/208 (46%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVMVAEDHTIVREGIKQLIGMARDMQVVGEAASGQQLLDQLRQISCDVVLLDISMPGVN  61
            IR+MVA+DH I+REG+KQ++++   + VV+EA++G Q+++ LR  + D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNQPPAVLVLSMHDEAQMAARALKIGAAGYATKDSEPALLLTALRKVAGG  121
            G + + RI+      ++L+L+M  E+Q+A R LK GA GY TKD++P  LL+A+++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G +VN+IA  LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLAAHSVADLVRYAMEHKLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

66) Pnap_0790 in NC_008781


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 91/205 (45%), Positives = 146/205 (72%), Gaps = 0/205 (0%)

Query  2    IRIVIADDHAIVREGLKRIVTLAEDMTVVGEAANGTEVMQQVRESDFDVLVLDLSMPGRS  61
            IR+++ADDH I+REGLK+I +L E + VV+EA+NGT+VM+ +R    D+L+LD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GMELIKMVRCEKPRLRILVLSMHEELQYAVRSIKCGASGYLTKESAPMQLMQVLRKIAAG  121
            G +L+  ++ + P+L IL+L+M  E Q A R +KCGA GY+TK++ P  L+  ++++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GAFISTGVAEQlalgsmlgssaaaHEKLTDREFEVFRLIAIGMSVTDIAGRLNLSAKTIS  181
              FI   +AEQ+ ++    ++ A HE+LT RE ++  ++A G +V +IA  L +S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKANLMQKMNLQNQSELIRYAIKH  206
            THKA LM+KM +  ++++++YAI H
Sbjct  185  THKARLMEKMMFTTNADIVKYAISH  209

67) Galf_1375 in NC_014394


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  153 bits (563),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 106/210 (51%), Positives = 150/210 (72%), Gaps = 1/210 (0%)

Query  2    IRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPGV  61
            IRL++ADDH I+REG+K+I++L + + V AEA ++ +VM  L      D+LLLD+SMPGV
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVE-PVDLLLLDMSMPGV  63

Query  62   TGMSLITQIKAQYPAFPILIFSMHNEAQIASRaikagaagfiakDSDPEILLEAIRRVAA  121
             G  L+T+I  QYP +PILI++M +E+QIA R +K GA G+I+KD+DPE LL AI+RVA 
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKTV  181
            G+ +ID  LAEQ+ F     +  A H  L++RE++I  +L  G+ VN+IA  L ISNKTV
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  STHKLNLITKMKLHSTADLVHYALEHKLFA  211
            STHK  L+ KM + + AD+V YA+ H L++
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLIT  213

68) mma_2916 in NC_009659


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 92/209 (45%), Positives = 143/209 (69%), Gaps = 0/209 (0%)

Query  2    IQILIADDHAIIRDGLKQIISFVSNMAVAGEASNGEEVLQKLRSLQVDVLVLDMSMPGRS  61
            I++++ADDH I+R+GLKQI+S+   + V +EA+NG +V++ LR   VD+L+LDMSMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIALIQQINAIKPDLPILVLSMHQESQYAVQAMRAGASGYITKNTASSQLIEGIRKVAEG  121
            G  L+ +I+   P LPIL+L+M  E+Q A + ++ GA GYITK+  +  L+ +I++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GTFVSPEISAKLIKQLHKPETDLPHTKLTAREFQIFSMLVEGHSVNDIAKILSLSNKTIS  181
              F+   ++ +++        +  H +LTARE QI  ML  G++VN+IA  L++SNKT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKAAVLQKMEASTTASLVYYALKHGLIN  210
            THKA +++KM  +T A +V YA+ H LI 
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLIT  213

69) AZKH_4039 in NC_020516


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  150 bits (553),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 91/212 (43%), Positives = 153/212 (73%), Gaps = 1/212 (0%)

Query  1    MEK-LRVLLADDHAIIRDGLKQILADTEDLAVAGEAANGHDLLHLVREQAWDVLVLDISM  59
            M+K +R+++ADDH I+R+GLKQI++  E L V +EA+NG ++++ +R ++ D+L+LD+SM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  60   PGRNGLDLIRLVREEQPRLPILILSMHHEEQYAVRALHAGASGYLTKESDADLLVHAIRR  119
            PG  G DL+  ++ + P+LPILIL+M  E Q A R L  GA GY+TK++D++ L+ AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  120  VARGGVYVSDTVAELMARGLMPTTNELPHTSLSDREYQIFHMLVMGQGLTEIANELSLSV  179
            VARG  ++ + +AE +  +    + E  H  L+ RE QI  ML  G+G+ +IA+ L++S 
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  180  KTISTHKTRILQKMAMANTSELIRYAVAHNLV  211
            KT+STHK+R+++KM  +  +++++YA++H L+
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

70) uhpA in NC_015740


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  150 bits (552),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 92/205 (45%), Positives = 146/205 (72%), Gaps = 0/205 (0%)

Query  1    MVAEDHTIVREGIKQLIGMARDMQVVGEAANGQQLLDQLRQVSCDVVLLDLSMPGVNGLE  60
            MVA+DH I+REG+KQ++++   + VV+EA+NG Q+++ LR  + D++LLD+SMPGV G +
Sbjct  8    MVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCGED  67

Query  61   AIPRIRALSQPPAVLVLSMHDEAQMAARALKIGAAGYATNDSEPALLLTALRKVAGGGRY  120
             + RI+      ++L+L+M  E+Q+A R LK GA GY T+D++P  LL+A+++VA G R+
Sbjct  68   LVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQRF  127

Query  121  IDPALADRMVFEVGLTDSRPPHALLSEREYSVFERLVQGDSVNDIAGKLALSSKTISTHK  180
            ID  LA+++VF      + + H  L+ RE  +   L +G +VN+IA  LA+S+KT+STHK
Sbjct  128  IDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVSTHK  187

Query  181  ARLMQKLAAHSVADLVRYAMEHKLV  205
            ARLM+K+   + AD+V+YA+ H L+
Sbjct  188  ARLMEKMMFTTNADIVKYAISHCLI  212

71) Desaf_2891 in NC_016629


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  148 bits (546),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 92/208 (45%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRIMIADDHPIVREGLKQILAGAHDIQVIAEADTGYDLLDKLPKFQPDTILLDIKMPGIG  61
            IR+M+ADDH I+REGLKQI++  + + V+AEA+ G ++++ L     D +LLD+ MPG+ 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLDVLKQIKSLKPELPVLILSMHPEEQYAIRVLKAGAAGYLTKNSAPEKLVDAIRKVNQG  121
            G D++ +I    P LP+LIL+M +E Q A RVLK GA GY+TK++ PE L+ AI++V +G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GKYISSSLAERLAFDLDSDSHKSSHEFLSDREYQVLCMIAQGKTVSEIADTLKLSVKTIS  181
             ++I   LAE++ F   +++  + HE L+ RE Q++ M+A+G+ V++IA++L +S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRARILEKMKMKNNAELTYYAIQNGLV  209
            T +AR++EKM    NA++  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

72) Daro_1400 in NC_007298


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  146 bits (536),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 93/211 (45%), Positives = 149/211 (71%), Gaps = 1/211 (0%)

Query  1    MEK-IKVLLADDHTIIRDGLKQILADTEDLVVLGEAANGNDVMHLIRGQNWGVLVLDISM  59
            M+K I++++ADDH I+R+GLKQI++  E LVV++EA+NG +VM+ +R +  ++L+LD+SM
Sbjct  1    MDKNIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSM  60

Query  60   PGRSGLDLIRMIKDEKPSLPILILSMHHEEQYALRAIHAGASGYVTKESDSDLLVTAIRR  119
            PG  G DL+  I  + P LPILIL+M  E Q A R +  GA GY+TK++D++ L++AI+R
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  120  VAAGGVYISEKVAELMVRDIRPAMAPLPHTLLSDREYQVFNMLVMGKGLTEIGAELSLSV  179
            VA G  +I + +AE +V       +   H  L+ RE Q+  ML  G+G+ +I+  L++S 
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  180  KTISTHKTHILQKMNMTNAAELIRYAIAHGL  210
            KT+STHK+++++KM  T  A++++YAI+H L
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCL  211

73) PputW619_4792 in NC_010501


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  146 bits (539),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 151/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVVGEAGNGEQLLETLRHTPCEVVLLDISMPGVS  61
            IR++VA+DH I+REG+KQ+++L   + VV+EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIARIRALHNPPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + ++RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTETRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

74) tcr1 in NC_006513


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  146 bits (538),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 94/203 (47%), Positives = 143/203 (71%), Gaps = 6/203 (2%)

Query  2    IEILVADDHPIVREGLKTVISMAPDIAVTGEAANGGEVLALIRRKKFDVLLLDMSMPGHD  61
            I ++VADDH I+REGLK ++S+   + V +EA+NG +V+  +R    D+LLLDMSMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIKRVRAEQPLLPILVLTMHGEAQLAASALKLGVAGYLTKGKDVESLTNAIRKVAAG  121
            G DL+ R++ + P LPIL+LTM +E+Q+A   LK G  GY+TK++D E+L  AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  QPCIDPDLAEKIIFNARFFAGP----QEPLSEREIQVLRMLQLGKTVTEISVELSLSPKT  177
            Q  ID  LAE+I+F    ++ +    +E L+ RE+Q++ ML  G+ V +I+  L++S KT
Sbjct  125  QRFIDHVLAEQIVFAE--YTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKT  182

Query  178  VSTHKVHLMRKLGIANNADLIRY  200
            VSTHK +LM K+ ++ NAD+++Y
Sbjct  183  VSTHKARLMEKMMFTTNADIVKY  205

75) Lcho_1402 in NC_010524


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  146 bits (539),  Expect = 6e-37, Method: Compositional matrix adjust.
 Identities = 86/209 (42%), Positives = 152/209 (73%), Gaps = 0/209 (0%)

Query  2    NMRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGK  61
            N+R+ +ADDH ++R+GLKQ+++ +  + V +EA++G +V++     + D+ +LD  MPG 
Sbjct  4    NIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGV  63

Query  62   GGIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVAR  121
             G DL+  ++ ++P  P+L+L++ +E Q A RVL+ GA GY+TK++ PE L+ AI++VAR
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI  181
            G RF+   L+EQ+ ++  T ++E++H RL+ RE QIM +LA G+ V +IA+ L +S +T+
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  STYRKRILEKLDLKSNAELMRYAIGHQLV  210
            ST + R++EK+ + +NA++++YAI+H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

76) SYN_01953 in NC_007759


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  146 bits (536),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 91/208 (44%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IKILIADDHTIVREGLKQIVGDVGDMMVADEAGNGQEALQKIREKDYDVVLLDISMPGRS  61
            I++++ADDH I+REGLKQI +    ++V  EAGNG + ++ +R    D++LLD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEVLKDIRAERPKLPVLILSMHSEEQYAVRALRAGASGYLTKASAPDELIGAIRKVSRG  121
            G +++  I+ + PKLP+LIL+M SE Q A R L+ GA GY+TK + P+ L++AI++V+RG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RKYVTaslaeklaleldadIRKPPHEILSDREYQVMLMLASGKTVTEIAEELCLSVKTIS  181
            ++++   LAE++ +   ++   + HE L+ RE Q+MLMLA G+ V +IAE L +S KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMNMKKNAELTLYAVQNHLV  209
            T ++R++EKM    NA++  YA+ + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

77) PP4_04430 in NC_021505


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  145 bits (534),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 151/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVVGEAGNGEQLLDTLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + VV+EAGNG Q+++ LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVASG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFTVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

78) PSEEN0437 in NC_008027


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLARDMQVAGEAGNGEQLLEALRQTPCDVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E+LR  P D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALNNPPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTETRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF        ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

79) uhpA in NC_017530


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLI  209
            THKARLM+K+   + A++VKYA+ H LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

80) L483_02090 in NC_021491


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 151/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVVGEAGNGEQLLETLRYTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + VV+EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

81) uhpA in NC_002947


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLI  209
            THKARLM+K+   + A++VKYA+ H LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

82) Daro_1572 in NC_007298


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (526),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 96/209 (46%), Positives = 138/209 (67%), Gaps = 1/209 (0%)

Query  2    IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGRN  61
            IR ++ADDH I+R GLK+I+S    +VV AEA+NG + +  LR    D L+LD++MPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVADG  121
            G +L+ +I  ++PKLPILIL+M  E   A R LK GA GY+ KD+    L  AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKTV  181
              FI++ +AE++ +     +  +A H  LT RE QI LM+ +G GV +I+  L +S KTV
Sbjct  125  QRFIDHVLAEQIVFAE-YTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  STHKASILAKMNLRNSAELVRYAIQHRLI  210
            STHKA ++ KM +  +A++V+YAI H LI
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

83) YSA_05830 in NC_017986


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

84) uvrY in NC_018220


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

85) Pput_0444 in NC_009512


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

86) PputGB1_0441 in NC_010322


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (526),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALHDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPSLADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

87) H681_02545 in NC_020829


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  143 bits (525),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 99/208 (48%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMAKDLQVVGEATNGEQLLETLRQTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L VV+EA NG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALSNPPAILMLSMHDEVQMVaralkagaagyaTKDSDPALLLTAIRKIASG  121
            G + + RI+      +IL+L+M  E Q+  R LK GA GY TKD+DP  LL+AI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPELADRMVFEVGLTDSRPPHALLSEREFSVFERLVQGDGVNEIAQQLAVSSKTIS  181
             R+ID  LA+++VF      + + H  L+ RE  +   L +G GVN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLNANSVADLVRYAMEHKLI  209
            THKARLM+K+   + AD+V+YA+ H LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

88) B479_02530 in NC_019905


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  142 bits (524),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 101/208 (49%), Positives = 150/208 (73%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALQDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAAG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTIS  181
             R+ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+S
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLKVNSLAELVKYAMEHKLV  209
            THKARLM+K+   + A++VKYA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

89) luxR in NC_016589


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  142 bits (524),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 86/209 (42%), Positives = 141/209 (68%), Gaps = 0/209 (0%)

Query  2    TTRVLIADDHAMVRDGLRQILANARDFEVAGEASDAASTLALVRSTPAQVLVLDLSMPGR  61
              R+++ADDH ++R+GL+QI++    + V +EA++++  +  +R  P ++L+LD+SMPG 
Sbjct  4    NIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGV  63

Query  62   SGIDLLKQIKDEIPALRILVLTMHAEQQYAARAFKGGASGYLTKESASAELLAAITKVAA  121
             G DL+ +I  + P L IL+LTM +E Q A R +K GA GY+TK++ +  LLAAI +VA 
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GGAYVSVAMAERFAQSLTEPAGALPHERLSDREFEVFRRLCAGESINRISETLSVSAKTV  181
            G  ++   +AE++  +    AG   HERL+ RE ++   L  G ++N+I+E+L++S KTV
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  STYKARILEKMQMPHEAALVRYAVRHKLF  210
            ST KAR++EKM    +A +V+YA+ H L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

90) Mpe_A2902 in NC_008825


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  141 bits (520),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 88/212 (42%), Positives = 152/212 (72%), Gaps = 5/212 (2%)

Query  2    SIKVAIVDDHAIVRAGLRQYLAEQMDLQVVAEASNGREAMDLVRAGGIDVLILDVSMPDQ  61
            +I++ + DDH I+R GL+Q ++ +  L VVAEA+NG + M+ +R   +D+L+LD+SMP+ 
Sbjct  4    NIRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGV  63

Query  62   NGVDVLSGIRARAPELPVLILSSYPETHYATALLKQGASGYLNKECDPQEILTAVRTLSR  121
             G D+++ I+ + P LP+LIL+ Y+E + A  +LK GA GY+ K+ DP+ +L+A++ ++R
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GRRYITPAVAE--LLADQLGGGKAEGLPHEQLSERELQVFLRLAQGETIGAIGESLSLSV  179
            G+R+I   +AE  ++A+   +G A    HE+L+ RE+Q+ L LA+G  +  I+E+L++S 
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEA---MHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  180  KTVSTYRTRVMEKMKLASNSDLTYYALKNGLI  211
            KTVST ++R+MEKM +++N+D+  YA+ + LI
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

91) gacA in NC_015726


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  141 bits (517),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEEPDIQVTGEAGSGDQVMAQLRDAEFDVLVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EAG+G QVM  LR    D+L+LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDVLKLIRQRKPELPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQG  121
            G D++  I+ + P LP+LIL+ Y+E Q A  +++ GA GY+TK++ P+ L+ AI+ VA+G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSATVADLLIGGLDKPTEQPVHQMLSEREFQIFCKLSRGQSVSVIADELFLSVKTVS  181
            +R++   +A+ ++ +    + +++H+ L+ RE QI   L+RG++V+ IA+ L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMGMKTNADLTYYAIKNGLV  209
            T ++R++EKM   TNAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

92) h16_A0153 in NC_008313


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  141 bits (518),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 88/208 (43%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRILIADDHEIVRAGLRQFLSEEPDIQVTGEAGSGDQVMAQLRDAEFDVLVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EAG+G QVM  LR    D+L+LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDVLKLIRQRKPELPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQG  121
            G D++  I+ + P LP+LIL+ Y+E Q A  +++ GA GY+TK++ P+ L+ AI+ VA+G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSATVADLLIGGLDKPTEQPVHQMLSEREFQIFCKLSRGQSVSVIADELFLSVKTVS  181
            +R++   +A+ ++ +    + +++H+ L+ RE QI   L+RG++V+ IA+ L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMGMKTNADLTYYAIKNGLV  209
            T ++R++EKM   TNAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

93) vsrD in NC_010528


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  140 bits (514),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 87/208 (42%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFISEEPDIQVTGEAGSGDEVMAQLRDGEFDVLVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EAG+G +VM  LR    D+L+LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDVLKLIRQRKPDLPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQG  121
            G D++  I+ + P LP+LIL+ Y+E Q A  +++ GA GY+TK++ P+ L+ AI+ VA+G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSATVADLLIGGLDKPTEQPVHQMLSEREFQIFCKLSRGQSVSVIADELFLSVKTVS  181
            +R++   +A+ ++ +    + +++H+ L+ RE QI   L+RG++V+ IA+ L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMGMKTNADLTYYAIKNGLV  209
            T ++R++EKM   TNAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

94) PPS_0406 in NC_015733


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  140 bits (513),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 99/206 (49%), Positives = 148/206 (72%), Gaps = 0/206 (0%)

Query  1    MLVAEDHTIVREGIKQLIGLAKDMQVAGEAGNGEQLLETLRHTPCEVVLLDISMPGVNGL  60
            ++VA+DH I+REG+KQ+++L   + V +EAGNG Q++E LR  P +++LLD+SMPGV G 
Sbjct  7    LMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCGE  66

Query  61   EAIPRIRALQDAPAILMLSMHDEaqmaaralkagaagyaTKDSDPALLLTAIRRVAAGGR  120
            + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  LL+AI+RVA G R
Sbjct  67   DLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQR  126

Query  121  YIDPALADRMVFEVGLTESRPLHTLLSEREFSVFERLAQGANVNDIAQQLALSSKTISTH  180
            +ID  LA+++VF      + ++H  L+ RE  +   LA+G  VN+IA+ LA+S+KT+STH
Sbjct  127  FIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVSTH  186

Query  181  KARLMQKLKVNSLAELVKYAMEHKLV  206
            KARLM+K+   + A++VKYA+ H L+
Sbjct  187  KARLMEKMMFTTNADIVKYAISHCLI  212

95) Rmet_0090 in NC_007973


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  140 bits (513),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFIAEEPDIEVTGEAGSGDEVMAQLRDSEFDVLVLDISMPDRN  61
            IR+++ADDH I+R GL+Q+++ +  + V +EAG+G +VM  LR    D+L+LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDVLKLIRQRLPALPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQG  121
            G D++  I+ + P LP+LIL+ Y+E Q A  +++ GA GY+TK++ P+ L+ AI+ VA+G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVADLLIGGLDKPTDQPVHRTLSEREFQIFCKLSRGQSVSVIADELFLSVKTVS  181
            +R++   +A+ ++ +    +++++H  L+ RE QI   L+RG++V+ IA+ L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMGMKTNADLTYYAIKNGLV  209
            T ++R++EKM   TNAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

96) Rfer_1873 in NC_007908


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 144/208 (70%), Gaps = 0/208 (0%)

Query  11   IRIAIVDDHAMVRAGLRQFFSDQIDFAVVAEAANGRGALDIVRKGEVDVILLDISMPDQS  70
            IR+ + DDH ++R GL+Q+FS +  + VVAEA+NG   ++ +R   VD++LLD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  71   GVDALIAIRARAPDLPVLILSGFAEEHYATTLLRQGASGYLNKDCDPEEIVKAIRTVHRG  130
            G D +  I+ + P LP+LIL+ ++E + A  +L+ GA GY+ KD DPE ++ AI+ V RG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  131  RKYITAGVAELLADGLSGGTDKPLHENLSERELQVFLRLAKGEAIGHMAVSMSLSVKTVS  190
            +++I   +AE +  +    ++ ++HE L+ RE+Q+ L LA+G ++ H+A ++++S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  191  TYRTRVMEKMKLETNSDLTYYALKSGLI  218
            T ++R+MEKM + TN+D+  YA+   LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

97) Reut_A0121 in NC_007347


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  139 bits (511),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 146/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLADEPDIQVTGEAGSGDEVMAQLRDGEFDVLVLDISMPERN  61
            IR+++ADDH I+R GL+Q+++ +  + V +EAG+G +VM  LR    D+L+LD+SMP   
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDVLKLIRQRKPDLPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQG  121
            G D++  I+ + P LP+LIL+ Y+E Q A  +++ GA GY+TK++ P+ L+ AI+ VA+G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSAAVADLLIGGLDKPTEQPVHQMLSEREFQIFCKLSRGQSVSVIADELFLSVKTVS  181
            +R++   +A+ ++ +    + +++H+ L+ RE QI   L+RG++V+ IA+ L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRSRILEKMGMKTNADLTYYAIKNGLV  209
            T ++R++EKM   TNAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

98) Pmen_4004 in NC_009439


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  136 bits (498),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 103/208 (50%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMARDLEVAGEACNGEQLLEVLRRTPCDVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L V +EA NG Q++E LR  P D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALTEAPAILVLSMHDEaqmaaralkagaagyaTKDSDPALLITAIRKVASG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  L++AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHAQLSEREFSVFERLVRGEGVNDIALHLAISNKTVS  181
             R+ID  LA+++VF      + + H +L+ RE  +   L RG GVN+IA  LAISNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLGAHSMADLVRYAMEHRLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

99) MDS_4342 in NC_015410


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 102/208 (50%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLVAEDHTIVREGIKQLIGMARDLEVAGEACNGEQLIEVLRRTPCDVVLLDISMPGVN  61
            IR++VA+DH I+REG+KQ++++   L V +EA NG Q++E LR  P D++LLD+SMPGV 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLEAIPRIRALTEAPAILVLSMHDEaqmaaralkagaagyaTKDSDPALLITAIRKVAGG  121
            G + + RI+      +IL+L+M  E+Q+A R LK GA GY TKD+DP  L++AI++VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYIDPALADRMVFEVGLTDSRPPHAQLSEREFSVFERLVRGEGVNDIALHLAVSNKTVS  181
             R+ID  LA+++VF      + + H +L+ RE  +   L RG GVN+IA  LA+SNKTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKARLMQKLGAHSVADLVRYAMEHRLV  209
            THKARLM+K+   + AD+V+YA+ H L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

100) Bpro_4296 in NC_007948


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 87/207 (43%), Positives = 140/207 (68%), Gaps = 0/207 (0%)

Query  2    IRIVIVDDHAIVREGLKRIISSADDMEVageaangaeaMQRVRELAFDVLMLDLSMPGRS  61
            IR+++ DDH I+REGLK+I+S  + + V +EA+NG++ M+ +R  + D+L+LD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GMELIKLVRAEKPKLRILVLSMHQELQYAVRAIKSGASGYLTKESAPAQLEQAIRKIAAG  121
            G +L+  ++ + PKL IL+L+M  E Q A R +K GA GY+TK++ P  L  AI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GAFISAEVAEQLALGAMPGSEVAAHGSLSDREFEVFRLLVAGVSVTEIAGRLNLSVKTVS  181
              FI   +AEQ+ ++    +  A H  L+ RE ++  +L  G +V +IA  L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKANLMHKMGLHNQSELIRYAMRHGL  208
            THKA LM+KM +  ++++++YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

101) Rta_30840 in NC_015677


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 141/208 (68%), Gaps = 0/208 (0%)

Query  2    IKVGIVDDHAIVRSGLKQFFSEQVDLRVVGEAASGREAIDLVRTTELDVLVMDLSMPGQS  61
            I++ + DDH I+R GLKQ+FS +  L VV+EA++G + ++ +R   +D+L++D+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDALGMIRAKAPDVGILILSGYPEEHYAMNLIRQGASGYLNKECEPMEIVNAIRTIALG  121
            G D +  I+ + P + ILIL+ Y+E + A  +++ GA GY+ K+ +P  ++ AI+ +A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYISPAVAELLAQQLNRKEGGAPHEQLSEREFQVFLKLAKGETAGDIAKALSLSVKTVS  181
            +R+I   +AE +      + G A HE+L+ RE Q+ L LA+G    +IA AL++S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRLMEKMSLASNSDLTYYALKNKLI  209
            T ++RLMEKM +++N+D+  YA+ + LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

102) NH44784_047701 in NC_021285


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  132 bits (486),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 89/208 (43%), Positives = 136/208 (66%), Gaps = 0/208 (0%)

Query  2    IAVMLADDHTLVRAGLRRLLEPTGDISVQGEAGNGAEALRLLAERPWDLLVLDLSMPGHD  61
            I +M+ADDH ++R GL++++     + V +EAGNG++ +  L   P DLL+LD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GVDLIRRIRRDYPAVPILVLTMHGEPQYAVQAIKAGAAGYLTKDCAATELEQAVRRVAAG  121
            G DL+ RI+ +YP +PIL+LTM +EPQ A + +K GA GY+TKD  +  L  A++RVA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYLSPFVAESVAFERHGDGAVQPHLLLSDRESAVFRHLARGLNNADIGRLLFLSVKTVS  181
             R++   +AE + F    +++   H  L+ RE  +   LARG    +I+  L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYKSRILVKMRLRNQADLVRYALKHRLI  209
            T K+R++ KM +  +AD+V+YA+ H LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

103) OCA4_c32690 in NC_017538


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 85/207 (42%), Positives = 136/207 (66%), Gaps = 1/207 (0%)

Query  3    RIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGISG  62
            R+++ADDH I REGL+QI++  + + +V+EA NG +++  LR  P D++LLD+SMPG+ G
Sbjct  6    RLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCG  65

Query  63   ITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQGE  122
              LV   +       I++L+M  E Q     LK GA GY+TK++ ++ L+AAI++V++G+
Sbjct  66   EDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQ  125

Query  123  LFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTVS  182
             F+    +++ ++ E  T + E  H RLT RE ++  ML  G+ +++IA  L +S KTVS
Sbjct  126  RFIDHVLAEQIVFAEY-TQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKTNLLAKMDAETTADLVRYALRHDL  209
            THK+ L+ KM   T AD+V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

104) OCAR_4625 in NC_011386


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 85/207 (42%), Positives = 136/207 (66%), Gaps = 1/207 (0%)

Query  3    RIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGISG  62
            R+++ADDH I REGL+QI++  + + +V+EA NG +++  LR  P D++LLD+SMPG+ G
Sbjct  6    RLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCG  65

Query  63   ITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQGE  122
              LV   +       I++L+M  E Q     LK GA GY+TK++ ++ L+AAI++V++G+
Sbjct  66   EDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQ  125

Query  123  LFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTVS  182
             F+    +++ ++ E  T + E  H RLT RE ++  ML  G+ +++IA  L +S KTVS
Sbjct  126  RFIDHVLAEQIVFAEY-TQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKTNLLAKMDAETTADLVRYALRHDL  209
            THK+ L+ KM   T AD+V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

105) OCA5_c33210 in NC_015684


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  130 bits (477),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 85/207 (42%), Positives = 136/207 (66%), Gaps = 1/207 (0%)

Query  3    RIIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGISG  62
            R+++ADDH I REGL+QI++  + + +V+EA NG +++  LR  P D++LLD+SMPG+ G
Sbjct  6    RLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCG  65

Query  63   ITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQGE  122
              LV   +       I++L+M  E Q     LK GA GY+TK++ ++ L+AAI++V++G+
Sbjct  66   EDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQ  125

Query  123  LFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTVS  182
             F+    +++ ++ E  T + E  H RLT RE ++  ML  G+ +++IA  L +S KTVS
Sbjct  126  RFIDHVLAEQIVFAEY-TQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  183  THKTNLLAKMDAETTADLVRYALRHDL  209
            THK+ L+ KM   T AD+V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

106) Veis_0032 in NC_008786


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 144/208 (70%), Gaps = 0/208 (0%)

Query  2    IRIGIVDDHAIVRSGLRQFLSEQVDLRVQGEAANGRQAIDLVRNQEIDVLLMDLSMPGQS  61
            IR+ + DDH I+R GL+Q++S +  L V +EA+NG Q ++ +R + +D+LL+D+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGASGYLNKECEPAQIVQAIRTIALG  121
            G D ++ ++ + P + ILIL+ Y+E + A  +++ GA GY+ K+ +P  ++ AI+ +A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYLTPVVAELLARQLGSKDERPAHQQLSEREFQVFLKLARGATTGDIAEALSLSVKTVS  181
            +R++  V+AE +     ++   + H++L+ RE Q+ L LARG    +IAEAL++S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRLMEKMGLSSNSDLTYYALKNRLI  209
            T ++RLMEKM +++N+D+  YA+ + LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

107) Bpro_1167 in NC_007948


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  129 bits (472),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 83/207 (41%), Positives = 139/207 (68%), Gaps = 0/207 (0%)

Query  2    IRIVIVDDHAIVREGLKRIISSADDMEVageaangaeaMQRVRELAFDVLMLDLSMPGRS  61
            IR+++ DDH I+REGLK+I+S  + + V +EA+NG++ M+ +R  + D+L+LD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GMELIKLVRAEKPKLRILVLSMHQELQYAVRAIKSGASGYLTKESAPAQLEEAIRKIAAG  121
            G +L+  ++ + PKL IL+L+M  E Q A R +K GA GY+TK++ P  L  AI+++A G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GAFISAEVAEQLALGAMPGSEAPRHDCLSNREFEVFRLVVDGMTLTDIAAQLHLSVKTVS  181
              FI   +AEQ+ ++    +  + H+ L+ RE ++  ++  G  + +IA  L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  THKVNLMHKMGLHNQSELIRYALKHGL  208
            THK  LM+KM +  ++++++YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

108) Palpr_2173 in NC_014734


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  126 bits (462),  Expect = 6e-31, Method: Compositional matrix adjust.
 Identities = 85/209 (41%), Positives = 136/209 (66%), Gaps = 1/209 (0%)

Query  2    IKVFIVDDHEIIREGLKKILKEEADLVVVGEAQNGDEVLQNIKDIDCDIMLLDMNMPGRS  61
            I++ + DDH I+REGLK+I+  +  LVVV+EA NG +V++ ++    D++LLDM+MPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   gldligdlkklkPHMHILVLSIHPEDKFALRTLKAGASGYVCKDTALEELVVAIRKVFIK  121
            G DL+  +    P + IL+L++ +E ++A R LK GA GY+ KD   E L+ AI++V   
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  GRYLSTTLAEQLAFDFMPDKGEQLPHESLSNREQEIMYLLASGKKVKDIAADLQLSISTV  181
             R++   LAEQ+ F    + GE + HE L+ RE +IM +LA G+ V++IA  L +S  TV
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAM-HERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  182  FTYRVRIFEKLKIKSNVELTHYAITNKLV  210
             T + R+ EK+ + +N ++  YAI++ L+
Sbjct  184  STHKARLMEKMMFTTNADIVKYAISHCLI  212

109) BRPE64_ACDS28480 in NC_021287


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  123 bits (450),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 86/213 (41%), Positives = 145/213 (69%), Gaps = 10/213 (4%)

Query  2    LKVLLADDHAIVRRGVAQL--LLER-GVATEVSEAETGMQALALAACRPFDVAMLDISLP  58
            +++++ADDH I+R G+ Q+  L ER  V +E +++   M++L +    P D+ +LD+S+P
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVE---PVDLLLLDMSMP  61

Query  59   DVNGIDLLKRIKRETPRLPVLMFSMYREDQYAVRALKAGASGYLSKTADPALMIGAIQQV  118
            +V G DL+ RI  + P+LP+L+++MY E Q A R LK GA GY++K  DP  +++AI++V
Sbjct  62   GVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRV  121

Query  119  AAGRKYVSAEMAQAL--ATYVSLDTERMPHEKLSDREYQTLCMLASGKRLTDIAHALSLS  176
            A G++++   +A+ +  A Y     E M HE+L+ RE Q + MLA G+ + +IA+AL++S
Sbjct  122  ARGQRFIDHVLAEQIVFAEYTQ-AGEAM-HERLTAREMQIMLMLARGRGVNHIAEALAIS  179

Query  177  VKTVSVYRARLLEKMKLANNAELTFYVMSNRLV  209
             KTVS  +ARL+EKM ++ NA++  Y +S+ L+
Sbjct  180  NKTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

110) luxR in NC_016589


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  123 bits (450),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 86/212 (41%), Positives = 144/212 (68%), Gaps = 8/212 (3%)

Query  2    LKILLADDHAIVRRGVAQL--LRERGVASEVSEAENGVQAIALATRHPHDVAMLDISLPD  59
            +++++ADDH I+R G+ Q+  L ER V   V+EA NG Q +     +P D+ +LD+S+P+
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVV--VAEAGNGTQVMEGLRVEPVDLLLLDMSMPG  62

Query  60   VNGIDLLKRIKREAPRLPVLMFSMYREDQYAVRALKAGASGYLSKTADPALMIGAIQQVA  119
            V G DL+ RI  + P+LP+L+++MY E Q A R LK GA GY++K  DP  +++AI++VA
Sbjct  63   VCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVA  122

Query  120  AGRKYVSPEMAEAL--ATYVSLDSDRLPHEKLSDREYQTLCMLASGKRLTDIALTLSLSV  177
             G++++   +AE +  A Y   +++   HE+L+ RE Q + MLA G+ + +IA +L++S 
Sbjct  123  RGQRFIDHVLAEQIVFAEYT--QAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  178  KTVSVYRARLLDKMKLANNAELTFYVMSNRLV  209
            KTVS  +ARL++KM ++ NA++  Y +S+ L+
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

111) vsrD in NC_014307


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  123 bits (448),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGAFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR  + D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLVRQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +  ++ + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

112) RSPO_c03113 in NC_017574


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  123 bits (448),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 149/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGAFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR  + D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLVRQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +  ++ + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

113) F504_312 in NC_020799


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGTFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR    D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLVRQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +  ++ + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

114) vsrD in NC_003295


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGTFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR    D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLVRQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +  ++ + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

115) Rpic12D_0153 in NC_012856


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 147/208 (71%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeeameQLRTGAFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G + ME LR  + D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLARQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +   + + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSVIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

116) Rpic_0145 in NC_010682


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  121 bits (443),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGAFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR  + D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLARQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +   + + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

117) vsrD in NC_014311


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  121 bits (443),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 85/208 (41%), Positives = 148/208 (72%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHEIVRAGLRQFLSEERDIevageaasgeevmeQLRTGVFDVVVLDISMPDRN  61
            IR+++ADDH I+R GL+Q++S +  + V +EA++G +VME LR    D+++LD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLKLVRQRHPDLPVLILSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQG  121
            G D +  ++ + P LP+LIL+ ++E Q A  +++ GA GY+TK++ P+ L+ AI+ V++G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  RRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKLARGQSVSIIAEELFLSVKTVS  181
            +R++   +AE ++ +    +++++H+ L+ RE QI   LARG++V+ IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRTRILEKMGMKSNADLTYYAIKNGLV  209
            T ++R++EKM   +NAD+  YAI + L+
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

118) JCM7686_pAMI5p060 in NC_022043


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  120 bits (440),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 137/205 (67%), Gaps = 2/205 (0%)

Query  2    IRIVLADDHRIVTDGLAQILSYQEDMEIAAVVEDGDRLCALLQTGIEIDVLVLDMSMPGR  61
            IR+++ADDH I+ +GL QI+S +E + + A   +G ++   L+    +D+L+LDMSMPG 
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVE-PVDLLLLDMSMPGV  63

Query  62   TGLDLIKHLNRHWPKLPILVLSMHPEAVYGMRALKLGANGYLTKDSDASQLVRAVRQVAA  121
             G DL+ +++ + PKLPIL+L+M +E+  + R LK GA GY+TKD+D+  L+ A+++VA 
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  122  GRSYASEALISQLVDSARGAPNSDIQA-LSDRELLVLQLLASGSSVTDIAERLCLSVKTV  180
            G+ +  + L  Q+V +    +   ++  L+ RE+ ++ +LA G +V +IAE L +S KTV
Sbjct  124  GQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTV  183

Query  181  STHKANIQRKLGVVGTAHLVKYALS  205
            STHKA +  K+     A++VKYA+S
Sbjct  184  STHKARLMEKMMFTTNADIVKYAIS  208

119) RGE_10170 in NC_017075


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  120 bits (438),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 90/210 (43%), Positives = 148/210 (71%), Gaps = 4/210 (1%)

Query  3    IRVGIVDDHAIVRTGLRQFLSEQVDLRVTGEAANGTEALDLVRRGEVDVLLMDLSMPGQS  62
            IR+ + DDH I+R GL+Q++S +  L V +EA+NGT+ ++ +R   VD+LL+D+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  63   GVDalaairaraaelpililSGFPETHYATTLLRQGASGYLNKECDPEEIVKAIRTVARG  122
            G D ++ I+ + + LPILIL+ ++E + A  +L+ GA GY+ K+ DPE ++ AI+ VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  123  RRYITSQVAE--LLADTMAGGTDKLPHESLSERELQVFLRLAKGETVGHIAESMFLSVKT  180
            +R+I   +AE  ++A+   +G     HE L+ RE+Q+ L LA+G  V HIAE++ +S KT
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAM--HERLTAREMQIMLMLARGRGVNHIAEALAISNKT  182

Query  181  VSTYRTRVLEKLKLASNSDLTYYALKNGLI  210
            VST ++R++EK+ +++N+D+  YA+ + LI
Sbjct  183  VSTHKARLMEKMMFTTNADIVKYAISHCLI  212

120) Bphyt_2656 in NC_010681


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  120 bits (437),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 86/208 (42%), Positives = 136/208 (66%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHAIVRGGFKQFVADEPDMCVAAEAATGDQTISLVREQAFDVVLLDIAMPDKN  61
            IR+++ADDH I+R G+KQ+ + +  + V AEA+ G Q +  +R ++ D++LLD++MP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLRVIKQVRPEQGVLILSGYPESQYAINLLRAGANGYLNKDCEPEEIVRAIRAVARG  121
            G D +  I    P   +LIL+ Y+E+Q A  +L+ GA GY+ KD +PE ++ AI+ VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  HRYLSEAVADTLADNLDKPAAGRPHEALSEREFQIFCKLAAGQIPTDIAEELHLSVKTVS  181
            +R++ + +A+ +       A+   HE L+ RE QI   LA G+   +IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRARVLEKMRLANNADLTYYAIKNGLI  209
            T +AR++EKM ++ NAD+  YAI + LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

121) Bcep18194_B2520 in NC_007511


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  119 bits (436),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 137/207 (67%), Gaps = 0/207 (0%)

Query  2    IRVILADDHAVMRDGLRYILETAGGFEIVGEASDGSATLALVERGAADVLLLDLSMPAPT  61
            IR+++ADDH +MR+GL+ I+     + +V+EA++G+  +  +   + D+LLLD+SMP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIELIRLVKRQAPSLRTLVLTMHAEAQYAARAFKAGATGYLTKDSATAELveavgkvaag  121
            G +L+  +  Q P L  L+LTM +E+Q A R +K GA GY+TKD+    L+ A+ +VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  gvyvSPSAAESlaltlrtpaatlpHERLSARELDVMRRIVAGQTVTQIATELALSAKTVS  181
              ++    AE + ++  T A+   HERL+ARE+++M  +  G+ V +IA  LA+S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYKTRILEKMELPHEAALVRYAVRHDL  208
            T K+R++EKM +  +A +V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

122) Bcep1808_4060 in NC_009255


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  119 bits (435),  Expect = 8e-29, Method: Compositional matrix adjust.
 Identities = 85/207 (42%), Positives = 138/207 (67%), Gaps = 0/207 (0%)

Query  2    IRVILADDHAVMRDGLRHILETAGGFDIVGEASDGDATLALAERHAADVLLLDLSMPGPT  61
            IR+++ADDH +MR+GL++I+     + +V+EA++G   +     ++ D+LLLD+SMPG  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDLIRLLKKRAPSLRLLVLTMHAETQYAARAFKAGATGYLTKDSASTALveavgkvaag  121
            G DL+  +  + P L +L+LTM +E Q A R +K GA GY+TKD+ + +L+ A+ +VA G
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  gvyvSPSAAESLARTLRTPADLLPHERLSARELDVMRRIVAGQTVTRIASELALSAKTVS  181
              ++    AE +  +  T A+   HERL+ARE+++M  +  G+ V +IA  LA+S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYKTRILEKMDLPHEAALVRYAVRHEL  208
            T K+R++EKM +  +A +V+YA+ H L
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCL  211

123) Bphy_1508 in NC_010622


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 87/212 (42%), Positives = 135/212 (64%), Gaps = 4/212 (1%)

Query  24   IRVLIADDHAIVRGGFRQFVADEPDMCVAAEAATGDETIRLVREQADSEPFDVVLLDIAM  83
            IR+++ADDH I+R G++Q+ + +  + V AEA+ G +    V E    EP D++LLD++M
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQ----VMEGLRVEPVDLLLLDMSM  60

Query  84   PDKNGIDTLRVIRQLRPEQNVLILSGYPESQYAINLLRAGANGYLNKDCEPGEIVRAIRS  143
            P+  G D +  I+   P   +LIL+ Y+E+Q A  +L+ GA GY+ KD +P  ++ AI+ 
Sbjct  61   PGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHR  120

Query  144  VARGHRYLSEAVADTLANSLDRPASSHPHELLSEREFQIFCKLASGQIPTDIADELHLSV  203
            VARG+R++ + +A+ +  +    A+   HE L+ RE QI   LA G+   +IA+ L +S 
Sbjct  121  VARGQRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISN  180

Query  204  KTVSTYRARVLEKMHMTNNADITYYAIKNGLI  235
            KTVST +AR++EKM  T NADI  YAI + LI
Sbjct  181  KTVSTHKARLMEKMMFTTNADIVKYAISHCLI  212

124) Tint_1238 in NC_014153


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  113 bits (410),  Expect = 9e-27, Method: Compositional matrix adjust.
 Identities = 71/162 (44%), Positives = 115/162 (71%), Gaps = 2/162 (1%)

Query  49   QVVLLDVSLPGGDGLDLLKRIKATHPRLPVLMLSMHAEHLFalralrggaagYLTKDSAP  108
            +++LLD+S+PG  G DL+ RI    P+LP+L+L+M +E  +A R L+ GA GY+TKD+ P
Sbjct  52   DLLLLDMSMPGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDP  111

Query  109  DVLLDAIRAATQGKRYLTATVAEQLAHHFQEGAAADAPAHQTLSDRELQVLLRIGAGRTV  168
            + LL AI+  ++G+R++   +AEQ+   F E + A+ + H+ L+ RE+Q++L ++ GR V
Sbjct  112  ETLLAAIHRVARGQRFIDHVLAEQIV--FAEYTQAGEAMHERLTAREMQIMLMLARGRGV  169

Query  169  GEVARELHLSVKTVSTHKTRLMQKMHLERDADLVRYVLDHEL  210
             ++A  L +S KTVSTHK+RLM+KM +  +AD+V+Y + H L
Sbjct  170  NHIAEALAISNKTVSTHKARLMEKMMFTTNADIVKYAISHCL  211

125) THI_1561 in NC_014145


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 71/162 (44%), Positives = 114/162 (71%), Gaps = 2/162 (1%)

Query  49   QVVLLDVSLPGGDGLDLLKRIKATHPRLPVLMLSMHAEHLFalralrggaagYLTKDSAP  108
            +++LLD+S+PG  G DL+ RI    P+LP+L+L+M +E  +A R L+ GA GY+TKD+ P
Sbjct  52   DLLLLDMSMPGVCGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDP  111

Query  109  GVLLDAIRAATQGKRYLTATVAEQLAHHFQEGAAADAPAHQTLSDRELQVLLRIGAGRTV  168
              LL AI+  ++G+R++   +AEQ+   F E + A+ + H+ L+ RE+Q++L ++ GR V
Sbjct  112  ETLLAAIHRVARGQRFIDHVLAEQIV--FAEYTQAGEAMHERLTAREMQIMLMLARGRGV  169

Query  169  GEVARELHLSVKTVSTHKTRLMQKMHLERDADLVRYVLDHEL  210
             ++A  L +S KTVSTHK+RLM+KM +  +AD+V+Y + H L
Sbjct  170  NHIAEALAISNKTVSTHKARLMEKMMFTTNADIVKYAISHCL  211

126) BC1002_1947 in NC_014117


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 84/208 (41%), Positives = 136/208 (66%), Gaps = 0/208 (0%)

Query  2    IRVLIADDHAIVRGGFRQFVADEPDMCVaaeaatgeeaIGLVREQAFDVVLLDIAMPDKN  61
            IR+++ADDH I+R G++Q+ + +  + V AEA+ G + +  +R ++ D++LLD++MP+  
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVC  64

Query  62   GIDTLRVIKQVRPEQGVLILSGYPESQYAINLLRAGANGYLNKDCEPEEIVRAIRSVARG  121
            G D +  I    P   +LIL+ Y+E+Q A  +L+ GA GY+ KD +PE ++ AI+ VARG
Sbjct  65   GEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARG  124

Query  122  HRYLSEAVADTLADNLDKPAAGRPHEALSEREFQIFCKLAAGQLPTEIAEELHLSVKTVS  181
            +R++ + +A+ +       A+   HE L+ RE QI   LA G+   +IAE L +S KTVS
Sbjct  125  QRFIDHVLAEQIVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVS  184

Query  182  TYRARVLEKMRLANNADLTYYAIKNGLI  209
            T +AR++EKM ++ NAD+  YAI + LI
Sbjct  185  THKARLMEKMMFTTNADIVKYAISHCLI  212

127) MYA_3747 in NC_017921


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 79/196 (41%), Positives = 127/196 (65%), Gaps = 0/196 (0%)

Query  1    MRDGLRHILETAGGFDIVGEASDGDATLALAERHTADVLLLDLSMPGPTGIDLIRLLKKR  60
            MR+GL++I+     + +V+EA++G   +     +  D+LLLD+SMPG  G DL+  +  +
Sbjct  16   MREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEPVDLLLLDMSMPGVCGEDLVTRIHLQ  75

Query  61   APSLRLLVLTMHAETQYAARAFKAGATGYLTKDSASTALveavgkvaaggvyvSPSAAES  120
             P L +L+LTM +E Q A R +K GA GY+TKD+ + +L+ A+ +VA G  ++    AE 
Sbjct  76   YPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVARGQRFIDHVLAEQ  135

Query  121  LARTLRTPADLLPHERLSARELDVMRRIVAGQTVTRIASELALSAKTVSTYKTRILEKMD  180
            +  +  T A+   HERL+ARE+++M  +  G+ V +IA  LA+S KTVST K+R++EKM 
Sbjct  136  IVFAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNKTVSTHKARLMEKMM  195

Query  181  LPHEAALVRYAVRHEL  196
            +  +A +V+YA+ H L
Sbjct  196  FTTNADIVKYAISHCL  211

128) Dalk_2566 in NC_011768


> AF083877|10|G3|4581631|AAD24683.1|Erwinia_amylovora_321|+|2462..3103|hrpY|-|response 
regulator HrpY
Length=213

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 85/212 (41%), Positives = 143/212 (68%), Gaps = 5/212 (2%)

Query  2    IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAID-LTLEHCPDVAVVDISMPGI  60
            IR+++ADDHVI+R GL++I+   E + V+ EA+NG + ++ L +E   D+ ++D+SMPG+
Sbjct  5    IRLMVADDHVIMREGLKQIFSLDERLVVVAEAGNGTQVMEGLRVEP-VDLLLLDMSMPGV  63

Query  61   DGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHS  120
             G ++V+R+H + P LP+LILTM  E Q   R +  GA+GY+TK + PE L++AI+++  
Sbjct  64   CGEDLVTRIHLQYPKLPILILTMYSEPQIARRVLKCGALGYITKDNDPETLLAAIHRVAR  123

Query  121  GSRFLTeeaaellalRVSRWskggsllds-lskRELQVLRHLASGHTNREIADSYHISVK  179
            G RF+ +  AE +    +  +++G  ++  L+ RE+Q++  LA G+   +IA++  IS K
Sbjct  124  GQRFIDHVLAEQIV--FAEYTQAGEAMHERLTAREMQIMLMLARGRGVNHIAEALAISNK  181

Query  180  TVDTYrarllkklnlrnnaDISRFAIQNNLIN  211
            TV T +ARL+ K+ +  NADI ++AI + LI 
Sbjct  182  TVSTHKARLMEKMMFTTNADIVKYAISHCLIT  213