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Homologs of ssaJ gene of Y09357

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE451236_12910
( YP_008265608.1 )

type III secretion system lipoprotein SsaJ

NC_021820
(Salmonella enterica 08-1736)

1e-106

100

2) ssaJ
( YP_005237279.1 )

needle complex inner membrane lipoprotein

NC_016856
(Salmonella enterica 14028S)

1e-106

100

3) CFSAN001921_10100
( YP_008255394.1 )

type III secretion system lipoprotein SsaJ

NC_021814
(Salmonella enterica CFSAN001921)

1e-106

100

4) STMMW_14141
( YP_005232468.1 )

putative pathogenicity island lipoprotein

NC_016854
(Salmonella enterica D23580)

1e-106

100

5) ssaJ
( NP_460374.1 )

needle complex inner membrane lipoprotein

NC_003197
(Salmonella enterica LT2)

1e-106

100

6) ssaJ
( YP_005181253.1 )

putative pathogenicity island lipoprotein

NC_016810
(Salmonella enterica SL1344)

1e-106

100

7) ssaJ
( YP_005242310.1 )

needle complex inner membrane lipoprotein

NC_016857
(Salmonella enterica ST4/74)

1e-106

100

8) STU288_03365
( YP_007901778.1 )

type III secretion system lipoprotein SsaJ

NC_021151
(Salmonella enterica U288)

1e-106

100

9) ssaJ
( YP_005251913.1 )

needle complex inner membrane lipoprotein

NC_016863
(Salmonella enterica UK-1)

1e-106

100

10) STMDT12_C14250
( YP_005247121.1 )

needle complex inner membrane lipoprotein

NC_016860
(Salmonella enterica T000240)

4e-106

11) SSPA1342
( YP_002142181.1 )

pathogenicity island lipoprotein

NC_011147
(Salmonella enterica AKU12601)

6e-106

12) ssaJ
( YP_150695.1 )

pathogenicity island lipoprotein

NC_006511
(Salmonella enterica ATCC 9150)

6e-106

13) SeD_A1934
( YP_002215722.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_011205
(Salmonella enterica CT_02021853)

6e-106

14) ssaJ
( YP_002243736.1 )

pathogenicity island lipoprotein

NC_011294
(Salmonella enterica P125109)

6e-106

15) ssaJ
( NP_456119.1 )

putative pathogenicity island lipoprotein

NC_003198
(Salmonella enterica CT18)

1e-105

16) ssaJ
( NP_805080.1 )

pathogenicity island lipoprotein

NC_004631
(Salmonella enterica Ty2)

1e-105

17) TY21A_06495
( YP_007925603.1 )

putative pathogenicity island lipoprotein

NC_021176
(Salmonella enterica Ty21a)

1e-105

18) ssaJ
( YP_002226676.1 )

pathogenicity island lipoprotein

NC_011274
(Salmonella enterica 287/91)

2e-105

19) CFSAN001992_04545
( YP_007470667.1 )

type III secretion system lipoprotein SsaJ

NC_020307
(Salmonella enterica CFSAN001992)

2e-105

20) CFSAN002050_13440
( YP_008260599.1 )

type III secretion system lipoprotein SsaJ

NC_021818
(Salmonella enterica CFSAN002050)

2e-105

21) SeAg_B1764
( YP_002146633.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_011149
(Salmonella enterica SL483)

2e-105

22) SEEH1578_16280
( YP_008247315.1 )

type III secretion system lipoprotein SsaJ

NC_021810
(Salmonella enterica 41578)

4e-105

23) SEEB0189_12490
( YP_008308813.1 )

type III secretion system lipoprotein SsaJ

NC_021844
(Salmonella enterica CFSAN000189)

4e-105

24) CFSAN002069_01955
( YP_008249251.1 )

type III secretion system lipoprotein SsaJ

NC_021812
(Salmonella enterica CFSAN002069)

4e-105

25) I137_05650
( YP_008380640.1 )

type III secretion system lipoprotein SsaJ

NC_021984
(Salmonella enterica S06004)

4e-105

26) ssaJ
( YP_216417.1 )

secretion system apparatus protein SsaJ

NC_006905
(Salmonella enterica SC-B67)

4e-105

27) SNSL254_A1520
( YP_002040661.1 )

type III secretion apparatus lipoprotein YscJ/HrcJ family

NC_011080
(Salmonella enterica SL254)

4e-105

28) SeHA_C1542
( YP_002045412.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_011083
(Salmonella enterica SL476)

4e-105

29) SeSA_A1505
( YP_002114422.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family protein

NC_011094
(Salmonella enterica CVM19633)

3e-104

30) ssaJ
( YP_005396807.1 )

pathogenicity island lipoprotein

NC_017046
(Salmonella enterica 798)

1e-95

31) ssaJ
( YP_008480896.1 )

putative pathogenicity island lipoprotein

NC_022221
(Salmonella enterica CDC1983-67)

7e-95

32) STBHUCCB_13670
( YP_005216925.1 )

Secretion system apparatus lipoprotein ssaJ

NC_016832
(Salmonella enterica P-stx-12)

7e-95

33) ssaJ
( YP_005212434.1 )

putative pathogenicity island lipoprotein

NC_016831
(Salmonella enterica RKS5078)

7e-95

34) ssaJ
( YP_002637878.1 )

pathogenicity island lipoprotein

NC_012125
(Salmonella enterica RKS4594)

3e-94

35) SPAB_01916
( YP_001588139.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

3e-94

36) SN31241_24790
( YP_008360395.1 )

Secretion system apparatus lipoprotein SsaJ

NC_021902
(Salmonella enterica USMARC-S3124.1)

3e-94

37) SARI_01572
( YP_001570608.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

9e-89

38) SBOV14061
( YP_008505276.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

4e-88

39) SG1295
( YP_454975.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

1e-61

40) YpsIP31758_3822
( YP_001402777.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-50

41) YPTB0319
( YP_068865.1 )

type III secretion system apparatus lipoprotein, EscJ/SsaJ

NC_006155
(Yersinia pseudotuberculosis IP 32953)

1e-50

42) YPTS_0343
( YP_001870789.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-50

43) YPK_3910
( YP_001722628.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-50

44) fliF1
( NP_991811.1 )

type III secretion system apparatus lipoprotein

NC_005810
(Yersinia pestis 91001)

2e-50

45) A1122_03825
( YP_005520460.1 )

type III secretion system apparatus lipoprotein

NC_017168
(Yersinia pestis A1122)

2e-50

46) YpAngola_A3937
( YP_001608235.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_010159
(Yersinia pestis Angola)

2e-50

47) YPA_4020
( YP_653926.1 )

type III secretion system apparatus lipoprotein

NC_008150
(Yersinia pestis Antiqua)

2e-50

48) YPO0263
( YP_002345344.1 )

type III secretion system apparatus lipoprotein

NC_003143
(Yersinia pestis CO92)

2e-50

49) YPD4_0227
( YP_005503439.1 )

type III secretion system apparatus lipoprotein

NC_017154
(Yersinia pestis D106004)

2e-50

50) YPD8_0232
( YP_005507315.1 )

type III secretion system apparatus lipoprotein

NC_017160
(Yersinia pestis D182038)

2e-50

51) YPC_0745
( YP_005622731.1 )

type III secretion system apparatus lipoprotein

NC_017265
(Yersinia pestis Harbin 35)

2e-50

52) YPN_3406
( YP_649333.1 )

type III secretion system apparatus lipoprotein

NC_008149
(Yersinia pestis Nepal516)

2e-50

53) YPDSF_3708
( YP_001165031.1 )

type III secretion system apparatus lipoprotein

NC_009381
(Yersinia pestis Pestoides F)

2e-50

54) YPZ3_0225
( YP_003566397.1 )

type III secretion system apparatus lipoprotein

NC_014029
(Yersinia pestis Z176003)

2e-50

55) YE105_C0327
( YP_004296528.1 )

type III secretion system apparatus lipoprotein

NC_015224
(Yersinia enterocolitica 105.5R(r))

6e-49

56) Y11_35351
( YP_006007034.1 )

secretion system apparatus protein SsaJ

NC_017564
(Yersinia enterocolitica Y11)

6e-49

57) Sbal117_2078
( YP_006037309.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_017579
(Shewanella baltica OS117)

1e-43

58) Sbal_1962
( YP_001050335.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009052
(Shewanella baltica OS155)

1e-43

59) Sbal195_2266
( YP_001554694.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009997
(Shewanella baltica OS195)

7e-44

60) Sbal678_2276
( YP_005273483.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_016901
(Shewanella baltica OS678)

7e-44

61) Sbal175_2403
( YP_006020960.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_017571
(Shewanella baltica BA175)

2e-43

62) ssaJ
( NP_902258.1 )

type III secretion system apparatus lipoprotein

NC_005085
(Chromobacterium violaceum ATCC 12472)

3e-40

63) SVI_2241
( YP_003556990.1 )

type III secretion system apparatus lipoprotein

NC_014012
(Shewanella violacea DSS12)

3e-40

64) ETAC_04110
( YP_007628313.1 )

protein EsaJ

NC_020796
(Edwardsiella tarda C07-087)

4e-39

65) esaJ
( YP_003294913.1 )

type III secretion system apparatus lipoprotein

NC_013508
(Edwardsiella tarda EIB202)

4e-39

66) esaJ
( YP_005698412.1 )

protein EsaJ

NC_017309
(Edwardsiella tarda FL6-60)

4e-39

67) NT01EI_0936
( YP_002932384.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family, putative

NC_012779
(Edwardsiella ictaluri 93-146)

1e-38

• Sequence Alignments

1) SE451236_12910 in NC_021820


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

2) ssaJ in NC_016856


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

3) STMMW_14141 in NC_016854


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

4) ssaJ in NC_003197


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

5) ssaJ in NC_016810


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

6) ssaJ in NC_016857


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

7) STU288_03365 in NC_021151


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

8) ssaJ in NC_016863


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

9) CFSAN001921_10100 in NC_021814


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  378 bits (1420),  Expect = 1e-106, Method: Compositional matrix adjust.
 Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

10) STMDT12_C14250 in NC_016860


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  376 bits (1414),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgilI  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  CYFCLRRRF  249
             YFCLRRRF
Sbjct  241  GYFCLRRRF  249

11) SeD_A1934 in NC_011205


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  376 bits (1412),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 247/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmllltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LML LTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

12) ssaJ in NC_011294


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  376 bits (1412),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

13) SSPA1342 in NC_011147


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  376 bits (1412),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

14) ssaJ in NC_006511


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  376 bits (1412),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

15) ssaJ in NC_003198


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  375 bits (1408),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIIFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRI+FLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

16) TY21A_06495 in NC_021176


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  375 bits (1408),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIIFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRI+FLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

17) ssaJ in NC_004631


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  375 bits (1408),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIIFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRI+FLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

18) SeAg_B1764 in NC_011149


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  374 bits (1405),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVQRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKV+RIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

19) CFSAN002050_13440 in NC_021818


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  374 bits (1405),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVQRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKV+RIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

20) ssaJ in NC_011274


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  374 bits (1404),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKAHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MK HRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SLLMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            S+LMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

21) CFSAN001992_04545 in NC_020307


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  374 bits (1405),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVQRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKV+RIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

22) SEEB0189_12490 in NC_021844


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

23) ssaJ in NC_006905


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

24) SEEH1578_16280 in NC_021810


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

25) CFSAN002069_01955 in NC_021812


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

26) SeHA_C1542 in NC_011083


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

27) SNSL254_A1520 in NC_011080


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMV+DVPARQTFWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

28) I137_05650 in NC_021984


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  373 bits (1401),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 247/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEEMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIE MLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYGEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTY+EGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgili  240
            SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

29) SeSA_A1505 in NC_011094


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  370 bits (1391),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 242/249 (98%), Positives = 246/249 (99%), Gaps = 0/249 (0%)

Query  1    MKVQRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60
            MKV+RIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180
            GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDVPVKQTFWIMDVINANKGKVEKWLMKYPYQLMLSltglligvgili  240
            SILMQPAEFRMV+DVP +QTFWIMDVINANKGKV KWLMKYPY LMLSLTGLL+GVGILI
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFCLRRRF  249
            GYFCLRRRF
Sbjct  241  GYFCLRRRF  249

30) ssaJ in NC_017046


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  341 bits (1282),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVVKWLMKYPYPlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

31) ssaJ in NC_022221


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  339 bits (1271),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 226/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYGEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTY+EGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

32) ssaJ in NC_016831


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  339 bits (1271),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 226/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYGEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTY+EGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

33) STBHUCCB_13670 in NC_016832


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  339 bits (1271),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 226/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMV+DVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVVKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKVVKWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

34) SN31241_24790 in NC_021902


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  337 bits (1263),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 225/229 (99%), Positives = 227/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMV+DVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

35) SPAB_01916 in NC_010102


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  337 bits (1263),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 225/229 (99%), Positives = 227/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMV+DVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

36) ssaJ in NC_012125


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  337 bits (1263),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 225/229 (99%), Positives = 227/229 (99%), Gaps = 0/229 (0%)

Query  1    MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  60
            +DLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
Sbjct  21   VDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ  80

Query  61   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  120
            FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA
Sbjct  81   FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNA  140

Query  121  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQT  180
            SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMV+DVPARQT
Sbjct  141  SPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQT  200

Query  181  FWIMDVINANKGKVEKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  229
            FWIMDVINANKGKV KWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  201  FWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

37) SARI_01572 in NC_010067


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  319 bits (1195),  Expect = 9e-89, Method: Compositional matrix adjust.
 Identities = 222/249 (90%), Positives = 239/249 (96%), Gaps = 0/249 (0%)

Query  1    MKVHRIlfltalaflltGCDVDLYRSLPEDEANQMLALLMQHHINAEKKQEENGITLRVE  60
            MKVHRI+FLT L+F+LT+CDVDLYRSLPEDEANQMLALLMQHHI+AEKKQEE+G+TLRVE
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVE  60

Query  61   QSQFINAVELLRLNGYPHRQFMTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120
            QSQFINAVELLRLNGYPHRQF TADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  121  GVINTKVTIALPIYDEGSNYSPSSVAVFIKYSPQVNMEALRIKIKDLIEKSIPGLQYGRI  180
            GVIN+KVTIALP YDEGSN SPSSVAVFIKYSPQVNMEA+R+KIKDLIE SIPGLQY++I
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  181  SILMQPAEFRMVPDAPARQTFSMMDVISANKEKVVKWLIKYPYQlmlsltglllgvgivi  240
            SILMQPAEFRMV+D PARQTF +MDVI+ANK KVVKWL+KYPY LMLSLTGLLLGVGI+I
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYPLMLSLTGLLLGVGILI  240

Query  241  gYFWLRRRF  249
            GYF LRRRF
Sbjct  241  GYFCLRRRF  249

38) SBOV14061 in NC_022241


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  316 bits (1186),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 212/215 (99%), Positives = 213/215 (99%), Gaps = 0/215 (0%)

Query  1    MLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLV  60
            MLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLV
Sbjct  35   MLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLV  94

Query  61   VSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQ  120
            VSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQ
Sbjct  95   VSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQ  154

Query  121  VNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQTFWIMDVINANKGKV  180
            VNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMV+DVPARQTFWIMDVINANKGKV
Sbjct  155  VNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVPARQTFWIMDVINANKGKV  214

Query  181  EKWLMKYPYQlmlsltglllgvgiligYFCLRRRF  215
             KWLMKYPY LMLSLTGLLLGVGILIGYFCLRRRF
Sbjct  215  VKWLMKYPYPLMLSLTGLLLGVGILIGYFCLRRRF  249

39) SG1295 in NC_007712


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  229 bits (852),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 124/208 (60%), Positives = 172/208 (83%), Gaps = 10/208 (4%)

Query  18   GCRIELYSGLPEEDANQMLAILMQHHIDADKQRGEGGGITLRVDQTQFINAVELLRLNGF  77
            +C ++LY +LPE++ANQMLA+LMQHHIDA+K + E +G+TLRV+Q+QFINAVELLRLNG+
Sbjct  18   ACDVDLYRSLPEDEANQMLALLMQHHIDAEK-KQEEDGVTLRVEQSQFINAVELLRLNGY  76

Query  78   PHRKYTTTEMMFPPNQLVVSPNEEQQKILYLKEQRIEGMLSQMEGVVQADVAIASRSQGG  137
            PHR++TT++ MFP+NQLVVSP+EEQQKI +LKEQRIEGMLSQMEGV++A V+IA  + + 
Sbjct  77   PHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDE  136

Query  138  EGDTAPISVAVFIKYSPQVNMETFRMQIRNLVENAVPGLQYDHISILMQPASYRIAAPTP  197
             ++++P SVAVFIKYSPQVNME+FR++I++L+E ++PGLQY  ISILMQPA +R+ A  P
Sbjct  137  GSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVP  196

Query  198  GNH--------QDPQGRAIHWLMQHYRF  217
            + +        +  +G+ + WLM+ Y +
Sbjct  197  ARQTFWIMDVINANKGKVVKWLMK-YPY  223

40) YpsIP31758_3822 in NC_009708


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

41) YPTB0319 in NC_006155


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

42) YPTS_0343 in NC_010634


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

43) YPK_3910 in NC_010465


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  192 bits (711),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

44) A1122_03825 in NC_017168


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

45) YpAngola_A3937 in NC_010159


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

46) YPA_4020 in NC_008150


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

47) YPC_0745 in NC_017265


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

48) fliF1 in NC_005810


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

49) YPO0263 in NC_003143


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

50) YPD4_0227 in NC_017154


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

51) YPD8_0232 in NC_017160


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

52) YPN_3406 in NC_008149


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

53) YPDSF_3708 in NC_009381


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

54) YPZ3_0225 in NC_014029


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  191 bits (709),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 105/220 (48%), Positives = 167/220 (76%), Gaps = 10/220 (4%)

Query  3    SLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVD  62
             +++++ + ++T+ L++CD++LY +L+E+EANQMLALLM H+I+AEK+ E  G V L V+
Sbjct  2    KVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVE  60

Query  63   KRQFINAVELLRQNGFPRQRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMD  122
            + QFINAVELLR NG+P+++F T D +FPANQLV SP +EQ K+ FLKEQ++E MLS+M+
Sbjct  61   QSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQME  120

Query  123  GVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQSYQSQIKGLVRDAVPGIDYAKI  182
            GVI+A VT+A+P   +G N+ P + +VFIKYSP+VN+++++ +IK+L+  ++PG++Y+KI
Sbjct  121  GVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI  180

Query  183  SVVMQPANYRFSASEAEQQ---------QGPQTTVQWLLR  213
            S++MQPA++R  A  + +Q               V+WL++
Sbjct  181  SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMK  220

55) YE105_C0327 in NC_015224


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  186 bits (691),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 98/206 (48%), Positives = 161/206 (79%), Gaps = 10/206 (4%)

Query  19   GCGMELYSGLSEGEANQMLALLMLHQIKAEKQSEKGGTVALNVDKSQFINAVELLRQHGF  78
            +C+++LY +L+E+EANQMLALLM H+I AEK+ E +G V+L V++SQFINAVELLR +G+
Sbjct  18   ACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVEQSQFINAVELLRLNGY  76

Query  79   PRQRFASVDELFPSNQLVTSPGQEQAKMVYLKEQQLESMLSHMDGVIQADVTIAMPAPTD  138
            P+++F++ D +FP+NQLV SP +EQ K+ +LKEQ++E+MLS+M+GVI+A VTIA+P+  +
Sbjct  77   PHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDE  136

Query  139  GKSSVPHAASVFIKYSPEVNLLSYQPQIKNLIRDGIPGIDFSQISVVMQPTNYRFSAPAT  198
            G ++ P + +VFIKYSP+VN+ +++ +IK+LI  +IPG+++S+IS++MQP+++R  A   
Sbjct  137  GSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVP  196

Query  199  QQQS---------HSEAALQWLLRHA  215
             +Q+         +    ++WL++ +
Sbjct  197  ARQTFWIMDVINANKGKVVKWLMKYP  222

56) Y11_35351 in NC_017564


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  186 bits (691),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 98/206 (48%), Positives = 161/206 (79%), Gaps = 10/206 (4%)

Query  19   GCGMELYSGLSEGEANQMLALLMLHQIKAEKQSEKGGTVALNVDKSQFINAVELLRQHGF  78
            +C+++LY +L+E+EANQMLALLM H+I AEK+ E +G V+L V++SQFINAVELLR +G+
Sbjct  18   ACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRVEQSQFINAVELLRLNGY  76

Query  79   PRQRFASVDELFPSNQLVTSPGQEQAKMVYLKEQQLESMLSHMDGVIQADVTIAMPAPTD  138
            P+++F++ D +FP+NQLV SP +EQ K+ +LKEQ++E+MLS+M+GVI+A VTIA+P+  +
Sbjct  77   PHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDE  136

Query  139  GKSSVPHAASVFIKYSPEVNLLSYQPQIKNLIRDGIPGIDFSQISVVMQPTNYRFSAPAT  198
            G ++ P + +VFIKYSP+VN+ +++ +IK+LI  +IPG+++S+IS++MQP+++R  A   
Sbjct  137  GSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFRMVADVP  196

Query  199  QQQS---------HSEAALQWLLRHA  215
             +Q+         +    ++WL++ +
Sbjct  197  ARQTFWIMDVINANKGKVVKWLMKYP  222

57) Sbal117_2078 in NC_017579


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 93/183 (51%), Positives = 136/183 (75%), Gaps = 3/183 (1%)

Query  10   LLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQFINAV  69
            +L F LT+C VDLYR LP+DEANQM+ALLM +HIDA  E  Q  + V+L++E+ QFINAV
Sbjct  11   VLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDA--EKKQEEDGVTLRVEQSQFINAV  68

Query  70   ELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVISARVS  129
            ELLR NG+P  +++  + +FP+ QLV SP +E+ K+ +LKEQ++E  LS M+GVI+A+V+
Sbjct  69   ELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVT  128

Query  130  IAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISVFLQAA  189
            IA P+ D G + A   S +V+IKYSPQ N+     +IK L++ ++PGL Y +IS+++Q+A
Sbjct  129  IALPTYDEGSN-ASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPA  187

Query  190  SYR  192
             +R
Sbjct  188  EFR  190

58) Sbal_1962 in NC_009052


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 93/183 (51%), Positives = 136/183 (75%), Gaps = 3/183 (1%)

Query  10   LLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQFINAV  69
            +L F LT+C VDLYR LP+DEANQM+ALLM +HIDA  E  Q  + V+L++E+ QFINAV
Sbjct  11   VLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDA--EKKQEEDGVTLRVEQSQFINAV  68

Query  70   ELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVISARVS  129
            ELLR NG+P  +++  + +FP+ QLV SP +E+ K+ +LKEQ++E  LS M+GVI+A+V+
Sbjct  69   ELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVT  128

Query  130  IAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISVFLQAA  189
            IA P+ D G + A   S +V+IKYSPQ N+     +IK L++ ++PGL Y +IS+++Q+A
Sbjct  129  IALPTYDEGSN-ASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPA  187

Query  190  SYR  192
             +R
Sbjct  188  EFR  190

59) Sbal195_2266 in NC_009997


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  169 bits (626),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 91/183 (50%), Positives = 136/183 (75%), Gaps = 3/183 (1%)

Query  10   LLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIDKDQFINAV  69
            +L F LT+C VDLYR LP+DEANQM+ALLM +HIDA  E  Q  + V+L++++ QFINAV
Sbjct  11   VLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDA--EKKQEEDGVTLRVEQSQFINAV  68

Query  70   ELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVISARVS  129
            ELLR NG+P  +++  + +FP+ QLV SP +E+ K+ +LKEQ++E  LS M+GVI+A+V+
Sbjct  69   ELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVT  128

Query  130  IAEPAPDSGRQIALTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISVFLQAA  189
            IA P+ D G + +   S +V+IKYSPQ N+     +IK L++ ++PGL Y +IS+++Q+A
Sbjct  129  IALPTYDEGSNAS-PSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPA  187

Query  190  SYR  192
             +R
Sbjct  188  EFR  190

60) Sbal678_2276 in NC_016901


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  169 bits (626),  Expect = 7e-44, Method: Compositional matrix adjust.
 Identities = 91/183 (50%), Positives = 136/183 (75%), Gaps = 3/183 (1%)

Query  10   LLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIDKDQFINAV  69
            +L F LT+C VDLYR LP+DEANQM+ALLM +HIDA  E  Q  + V+L++++ QFINAV
Sbjct  11   VLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDA--EKKQEEDGVTLRVEQSQFINAV  68

Query  70   ELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVISARVS  129
            ELLR NG+P  +++  + +FP+ QLV SP +E+ K+ +LKEQ++E  LS M+GVI+A+V+
Sbjct  69   ELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVT  128

Query  130  IAEPAPDSGRQIALTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISVFLQAA  189
            IA P+ D G + +   S +V+IKYSPQ N+     +IK L++ ++PGL Y +IS+++Q+A
Sbjct  129  IALPTYDEGSNAS-PSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPA  187

Query  190  SYR  192
             +R
Sbjct  188  EFR  190

61) Sbal175_2403 in NC_017571


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  168 bits (620),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 93/183 (51%), Positives = 135/183 (74%), Gaps = 3/183 (1%)

Query  10   LLVFALTGCKVDLYRDLPQDEANQMVALLMLNHIDASAEADQKSGNVSLKIEKDQFINAV  69
            +L F LT+C VDLYR LP+DEANQM+ALLM +HIDA  E  Q  + V+L++E+ QFINAV
Sbjct  11   VLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDA--EKKQEEDGVTLRVEQSQFINAV  68

Query  70   ELLRQNGFPKPHYANIEDLFPSGQLVTSPAQEEAKMGYLKEQQLERTLSSMDGVISASVS  129
            ELLR NG+P  +++  + +FP+ QLV SP +E+ K+ +LKEQ++E  LS M+GVI+A V+
Sbjct  69   ELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVT  128

Query  130  IAEPAPDTGRQLAQTKSASVYIKYSPQANLTNTENQIKSLVQNAVPGLSYDNISVFLQAA  189
            IA P+ D G + A   S +V+IKYSPQ N+     +IK L++ ++PGL Y +IS+++Q+A
Sbjct  129  IALPTYDEGSN-ASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPA  187

Query  190  SYR  192
             +R
Sbjct  188  EFR  190

62) ssaJ in NC_005085


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 91/191 (48%), Positives = 139/191 (73%), Gaps = 1/191 (0%)

Query  1    MKALRRLWPLLILMSLMGCKVDLYSGLSEDEANQMLALLMLRNVDAEKKIIKEGNVTVRV  60
            MK  R +   ++   L +C VDLY +L+EDEANQMLALLM +++DAEKK   +G VT+RV
Sbjct  1    MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDG-VTLRV  59

Query  61   EKEQFTDAVEVLRQHGLPSKRTETMADLFPSGQLVTSPAQEQAKIGYLKEQLLEKMLRGM  120
            E+ QF +AVE+LR +G P ++  T   +FP+ QLV SP +EQ KI +LKEQ +E ML  M
Sbjct  60   EQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQM  119

Query  121  DGVISAQVSIAESVSQNRREAPAPSASVFIKYSPGINMQSRETDIKRLIHTGVPNLRSEN  180
            +GVI+A+V+IA +  ++  +A+++S +VFIKYSP +NM++    IK LI+ ++P L+  +
Sbjct  120  EGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSK  179

Query  181  ISVVLQAADYR  191
            IS+++Q+A++R
Sbjct  180  ISILMQPAEFR  190

63) SVI_2241 in NC_014012


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  157 bits (581),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 136/185 (74%), Gaps = 3/185 (1%)

Query  8    LLLLVILLSGCKVDLFRDLSQDDANQMVALLMLHHIDAASELDDKSGTITLKIDKDQFIN  67
            L +L ++L++C VDL+R L++D+ANQM+ALLM HHIDA    ++  + +TL++++ QFIN
Sbjct  9    LTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEE--DGVTLRVEQSQFIN  66

Query  68   AVELLRQNGFPKPHYSSIEDLFPSGQLVTSPTQEEAKMNYLKEQQLERTLSTMDGVISAR  127
            AVELLR NG+P  ++++ + +FP+ QLV SP +E+ K+N+LKEQ++E  LS M+GVI+A+
Sbjct  67   AVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAK  126

Query  128  VTIAEMELDPNRREPTDKSASVFIKYSPQANLSNAKNNIKKLIQNSVTGLSVDNISVYLQ  187
            VTIA    D    +++  S +VFIKYSPQ N+   + +IK LI+ S+ GL   +IS+ +Q
Sbjct  127  VTIALPTYDEG-SNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQ  185

Query  188  ESNYR  192
             +++R
Sbjct  186  PAEFR  190

64) ETAC_04110 in NC_020796


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 86/176 (49%), Positives = 130/176 (74%), Gaps = 0/176 (0%)

Query  15   LLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEGVTLLVERERFVDAVEVLRQN  74
            +L++C  +LY  L E EANQM+ALL+ ++I A+K+ E +GVTL VE+ +F++AVE+LR N
Sbjct  15   FLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLN  74

Query  75   GLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGVINAEVSVAEPRV  134
            G P+R+  T + +FP+ QLV SP++E+ K+N+LK Q+IE ML+ M+GVINA V++A P  
Sbjct  75   GYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTY  134

Query  135  IVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISVTLQRAEYR  190
              G  ++ +S AVFIKYSP++N+ A    I+ LI+ +IPGL   +IS+ +Q AE+R
Sbjct  135  DEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFR  190

65) esaJ in NC_013508


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 86/176 (49%), Positives = 130/176 (74%), Gaps = 0/176 (0%)

Query  15   LLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEGVTLLVERERFVDAVEVLRQN  74
            +L++C  +LY  L E EANQM+ALL+ ++I A+K+ E +GVTL VE+ +F++AVE+LR N
Sbjct  15   FLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLN  74

Query  75   GLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGVINAEVSVAEPRV  134
            G P+R+  T + +FP+ QLV SP++E+ K+N+LK Q+IE ML+ M+GVINA V++A P  
Sbjct  75   GYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTY  134

Query  135  IVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISVTLQRAEYR  190
              G  ++ +S AVFIKYSP++N+ A    I+ LI+ +IPGL   +IS+ +Q AE+R
Sbjct  135  DEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFR  190

66) esaJ in NC_017309


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 86/176 (49%), Positives = 130/176 (74%), Gaps = 0/176 (0%)

Query  15   LLSGCKSELYSKLDEKEANQMMALLIYNNIPADKRVEKEGVTLLVERERFVDAVEVLRQN  74
            +L++C  +LY  L E EANQM+ALL+ ++I A+K+ E +GVTL VE+ +F++AVE+LR N
Sbjct  15   FLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLN  74

Query  75   GLPRRKTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLGSMDGVINAEVSVAEPRV  134
            G P+R+  T + +FP+ QLV SP++E+ K+N+LK Q+IE ML+ M+GVINA V++A P  
Sbjct  75   GYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTY  134

Query  135  IVGEAPPQASAAVFIKYSPEINLPAREAEIRALIHNGIPGLAPDRISVTLQRAEYR  190
              G  ++ +S AVFIKYSP++N+ A    I+ LI+ +IPGL   +IS+ +Q AE+R
Sbjct  135  DEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKISILMQPAEFR  190

67) NT01EI_0936 in NC_012779


> Y09357|1|G1|1669745|CAA70532.1|Salmonella_enterica_subsp._enterica_serovar_Typhimurium_LT2|+|203..952|ssaJ|-|secretion 
system 
apparatus
Length=249

 Score =  152 bits (562),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 93/191 (49%), Positives = 138/191 (73%), Gaps = 2/191 (1%)

Query  1    MKITPWILLFSMLPL-LSGCKSELYSKLDEKEANQMMALLIYNKIPADKRMEKDGVTLLV  59
            MK+   I+++++L + L++C  +LY  L E EANQM+ALL+ + I A+K+ E DGVTL V
Sbjct  1    MKVHR-IVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRV  59

Query  60   DQDRFVDAVEVLRQNGLPRPQTVTMQELFPSGQLVTSPEQEEAKLNYLKSQQIEKMLSSM  119
            +Q +F++AVE+LR NG P+ Q  T + +FP+ QLV SP++E+ K+N+LK Q+IE MLS M
Sbjct  60   EQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQM  119

Query  120  DGVINAEVSVAEPRAIVGEAPPLASAAVFIKYSPDVNLPAREAEIRALINNGIPGLAPDR  179
            +GVINA V++A P    G  ++ +S AVFIKYSP+VN+ A    I+ LI+ +IPGL   +
Sbjct  120  EGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSK  179

Query  180  ISVTLQRAEYR  190
            IS+ +Q AE+R
Sbjct  180  ISILMQPAEFR  190