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Homologs of 23S rRNA gene of Y07639

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SVEN_r5
( - )

23S ribosomal RNA

NC_018750
(Streptomyces venezuelae ATCC 10712)

e-248

86.7

2) SVEN_r2
( - )

23S ribosomal RNA

NC_018750
(Streptomyces venezuelae ATCC 10712)

e-248

86.7

• Sequence Alignments

1) SVEN_r2 in NC_018750


>Y07639|1|R1|-|-|Listeria_ivanovii_ATCC_19119|+|1..756|23S 
          Length = 756

 Score = 855 bits (2207), Expect = e-248
 Identities = 491/567 (87%)
 Strand = Plus / Plus

Query: 72  gacagtgtctgatgggtagtttaactggggcggttgcctcccaaagggtaacggaggcgc 131
           ||||||||| | |||| ||||| ||||||||||| |||||| |||| |||||||||||||
Sbjct: 82  gacagtgtcaggtgggcagtttgactggggcggtcgcctcctaaagagtaacggaggcgc 141

Query: 132 ccaaaggttccctcagcctggttggcaatcaggtgttgagtgtaagtgcacaagggagct 191
           ||||||||||||||||  ||| ||| |||||   |  ||||||||  |||||||||||||
Sbjct: 142 ccaaaggttccctcagaatggatggaaatcattcgcagagtgtaaaggcacaagggagct 201

Query: 192 tgactgtgagaccgacgggtcgagcagggacgaaagtcgggactagtgatccggcggtgg 251
           |||||| ||||| |||  |||||||||||||||||||||||  ||||||||||| |||  
Sbjct: 202 tgactgcgagactgacaagtcgagcagggacgaaagtcgggcttagtgatccggtggttc 261

Query: 252 cttgtggaagcgccgtcgctcaacggataaaaggtaccccggggataacaggctgatctt 311
           |   |||||| ||| |||||||||||||||||| |||||||||||||||||||| |||| 
Sbjct: 262 cgcatggaagggccatcgctcaacggataaaagctaccccggggataacaggcttatctc 321

Query: 312 ccccaagagtccatatcgacgggatggtttggcacctcgatgtcggctcgtcgcatcctg 371
           ||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 322 ccccaagagtccacatcgacggggaggtttggcacctcgatgtcggctcgtcgcatcctg 381

Query: 372 gggctggagtcggtcccaagggttgggctgttcgcccattaaagcggtacgcgagctggg 431
           |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 382 gggctgtagtcggtcccaagggttgg-ctgttcgcccattaaagcggcacgcgagctggg 440

Query: 432 tttagaacgtcgtgagacagttcggtccctatccgctgtgcgcgtaggaatattgagaag 491
           || ||||||||||||||||||||||||||||||||  | | ||| |||||  |||||| |
Sbjct: 441 ttcagaacgtcgtgagacagttcggtccctatccgtcgcgggcgcaggaaatttgagagg 500

Query: 492 ggctgtccctagtacgagaggaccgggacggacgaacctctggtgtgccagttgtcctgc 551
            ||||||| ||||||||||||||||||| ||||  ||| ||||||| |||||||| | ||
Sbjct: 501 agctgtccttagtacgagaggaccgggatggacacaccgctggtgtaccagttgttccgc 560

Query: 552 caagggcatggctggttggctacgttcgggagggataaccgctgaaagcatctaagcggg 611
           || | |||| ||||| | |||| ||  || |||||||| ||||||||||||||||||| |
Sbjct: 561 caggagcatcgctgggtagctatgtgtggcagggataaacgctgaaagcatctaagcgtg 620

Query: 612 aagcctgcttcgagatgagtattccca 638
           |||||  | || |||||||  ||||||
Sbjct: 621 aagcccccctcaagatgagatttccca 647

2) SVEN_r5 in NC_018750


>Y07639|1|R1|-|-|Listeria_ivanovii_ATCC_19119|+|1..756|23S 
          Length = 756

 Score = 855 bits (2207), Expect = e-248
 Identities = 491/567 (87%)
 Strand = Plus / Plus

Query: 107 gacagtgtctgatgggtagtttaactggggcggttgcctcccaaagggtaacggaggcgc 166
           ||||||||| | |||| ||||| ||||||||||| |||||| |||| |||||||||||||
Sbjct: 82  gacagtgtcaggtgggcagtttgactggggcggtcgcctcctaaagagtaacggaggcgc 141

Query: 167 ccaaaggttccctcagcctggttggcaatcaggtgttgagtgtaagtgcacaagggagct 226
           ||||||||||||||||  ||| ||| |||||   |  ||||||||  |||||||||||||
Sbjct: 142 ccaaaggttccctcagaatggatggaaatcattcgcagagtgtaaaggcacaagggagct 201

Query: 227 tgactgtgagaccgacgggtcgagcagggacgaaagtcgggactagtgatccggcggtgg 286
           |||||| ||||| |||  |||||||||||||||||||||||  ||||||||||| |||  
Sbjct: 202 tgactgcgagactgacaagtcgagcagggacgaaagtcgggcttagtgatccggtggttc 261

Query: 287 cttgtggaagcgccgtcgctcaacggataaaaggtaccccggggataacaggctgatctt 346
           |   |||||| ||| |||||||||||||||||| |||||||||||||||||||| |||| 
Sbjct: 262 cgcatggaagggccatcgctcaacggataaaagctaccccggggataacaggcttatctc 321

Query: 347 ccccaagagtccatatcgacgggatggtttggcacctcgatgtcggctcgtcgcatcctg 406
           ||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 322 ccccaagagtccacatcgacggggaggtttggcacctcgatgtcggctcgtcgcatcctg 381

Query: 407 gggctggagtcggtcccaagggttgggctgttcgcccattaaagcggtacgcgagctggg 466
           |||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 382 gggctgtagtcggtcccaagggtt-ggctgttcgcccattaaagcggcacgcgagctggg 440

Query: 467 tttagaacgtcgtgagacagttcggtccctatccgctgtgcgcgtaggaatattgagaag 526
           || ||||||||||||||||||||||||||||||||  | | ||| |||||  |||||| |
Sbjct: 441 ttcagaacgtcgtgagacagttcggtccctatccgtcgcgggcgcaggaaatttgagagg 500

Query: 527 ggctgtccctagtacgagaggaccgggacggacgaacctctggtgtgccagttgtcctgc 586
            ||||||| ||||||||||||||||||| ||||  ||| ||||||| |||||||| | ||
Sbjct: 501 agctgtccttagtacgagaggaccgggatggacacaccgctggtgtaccagttgttccgc 560

Query: 587 caagggcatggctggttggctacgttcgggagggataaccgctgaaagcatctaagcggg 646
           || | |||| ||||| | |||| ||  || |||||||| ||||||||||||||||||| |
Sbjct: 561 caggagcatcgctgggtagctatgtgtggcagggataaacgctgaaagcatctaagcgtg 620

Query: 647 aagcctgcttcgagatgagtattccca 673
           |||||  | || |||||||  ||||||
Sbjct: 621 aagcccccctcaagatgagatttccca 647