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PAthogenisity Island DataBase (PAI DB)

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Homologs of inlF gene of U77367

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) LM5578_0443
( YP_003412561.1 )

hypothetical protein

NC_013766
(Listeria monocytogenes 08-5578)

0.0

2) LM5923_0442
( YP_003415650.1 )

hypothetical protein

NC_013768
(Listeria monocytogenes 08-5923)

0.0

3) LMRG_00102
( YP_005961553.1 )

internalin

NC_017544
(Listeria monocytogenes 10403S)

0.0

100

4) inlF
( YP_006695239.1 )

internalin F

NC_018592
(Listeria monocytogenes SLCC5850)

0.0

100

5) lmo0409
( NP_463939.1 )

hypothetical protein

NC_003210
(Listeria monocytogenes EGD-e)

0.0

6) LMKG_01500
( YP_005967327.1 )

internalin F

NC_017546
(Listeria monocytogenes FSL R2-561)

0.0

7) inlF
( YP_006683740.1 )

internalin F

NC_018588
(Listeria monocytogenes SLCC2372)

0.0

8) inlF
( YP_006686674.1 )

internalin F

NC_018589
(Listeria monocytogenes SLCC2479)

0.0

9) M642_14710
( YP_008273719.1 )

internalin F

NC_021823
(Listeria monocytogenes C1-387)

0.0

10) inlF
( YP_006698090.1 )

internalin F

NC_018593
(Listeria monocytogenes SLCC7179)

0.0

11) M639_00460
( YP_008294741.1 )

internalin F

NC_021837
(Listeria monocytogenes J2-031)

0.0

12) inlF
( YP_006677974.1 )

internalin F

NC_018586
(Listeria monocytogenes SLCC2540)

0.0

13) inlF
( YP_006672238.1 )

internalin F

NC_018584
(Listeria monocytogenes ATCC 19117)

0.0

14) LM220_05422
( YP_008288619.1 )

internalin F

NC_021830
(Listeria monocytogenes J1-220)

0.0

15) M640_01000
( YP_008300754.1 )

internalin F

NC_021839
(Listeria monocytogenes J1776)

0.0

16) LM1816_01587
( YP_008286292.1 )

internalin F

NC_021829
(Listeria monocytogenes J1816)

0.0

17) M644_13940
( YP_008285369.1 )

internalin F

NC_021827
(Listeria monocytogenes J1817)

0.0

18) M645_01530
( YP_008303746.1 )

internalin F

NC_021840
(Listeria monocytogenes J1926)

0.0

19) M643_12400
( YP_008281984.1 )

internalin F

NC_021826
(Listeria monocytogenes N1-011A)

0.0

20) M641_11745
( YP_008299849.1 )

internalin F

NC_021838
(Listeria monocytogenes R2-502)

0.0

21) inlF
( YP_006692370.1 )

internalin F

NC_018591
(Listeria monocytogenes SLCC2482)

0.0

22) inlF
( YP_006680867.1 )

internalin F

NC_018587
(Listeria monocytogenes SLCC2755)

0.0

23) M637_04750
( YP_008274754.1 )

internalin F

NC_021824
(Listeria monocytogenes J2-064)

0.0

24) MUO_02260
( YP_006204671.1 )

internalin, peptidoglycan bound protein (LPXTG motif)

NC_017728
(Listeria monocytogenes 07PF0776)

0.0

25) inlF
( YP_002757146.1 )

internalin, peptidoglycan bound protein (LPXTG motif)

NC_012488
(Listeria monocytogenes Clip81459)

0.0

26) inlF
( YP_006753549.1 )

internalin F (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

0.0

27) inlF
( YP_013036.1 )

internalin

NC_002973
(Listeria monocytogenes F2365)

0.0

28) M638_13315
( YP_008279273.1 )

internalin F

NC_021825
(Listeria monocytogenes J2-1091)

0.0

29) inlA_5
( YP_007014002.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

0.0

30) inlF
( YP_006675098.1 )

internalin F

NC_018585
(Listeria monocytogenes SLCC2378)

0.0

31) LMLG_2940
( YP_005970242.1 )

internalin

NC_017547
(Listeria monocytogenes Finland 1988)

0.0

32) M642_14825
( YP_008273742.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

1e-137

33) LMLG_1991
( YP_005970265.1 )

internalin A

NC_017547
(Listeria monocytogenes Finland 1988)

1e-137

34) inlA
( YP_006698115.1 )

internalin A

NC_018593
(Listeria monocytogenes SLCC7179)

3e-137

35) M637_04850
( YP_008274774.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

3e-137

36) M643_12500
( YP_008282004.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

3e-137

37) M641_11645
( YP_008299830.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

3e-137

38) inlA
( YP_006692391.1 )

internalin A

NC_018591
(Listeria monocytogenes SLCC2482)

3e-137

39) inlA
( YP_006677996.1 )

internalin A

NC_018586
(Listeria monocytogenes SLCC2540)

3e-137

40) inlA
( YP_006680889.1 )

internalin A

NC_018587
(Listeria monocytogenes SLCC2755)

3e-137

41) MUO_02455
( YP_006204706.1 )

internalin A

NC_017728
(Listeria monocytogenes 07PF0776)

6e-137

42) inlA
( YP_002757172.1 )

Internalin A

NC_012488
(Listeria monocytogenes Clip81459)

6e-137

43) inlA
( YP_006753578.1 )

internalin A (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

6e-137

44) inlA
( YP_003412585.1 )

Internalin A

NC_013766
(Listeria monocytogenes 08-5578)

8e-137

45) inlA
( YP_003415674.1 )

Internalin A

NC_013768
(Listeria monocytogenes 08-5923)

8e-137

46) M639_00345
( YP_008294718.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

1e-136

47) LMOG_02646
( YP_005964423.1 )

internalin A

NC_017545
(Listeria monocytogenes J0161)

1e-136

48) LMRG_00126
( YP_005961575.1 )

internalin A

NC_017544
(Listeria monocytogenes 10403S)

9e-137

49) inlA
( NP_463962.1 )

internalin A

NC_003210
(Listeria monocytogenes EGD-e)

9e-137

50) LMKG_01477
( YP_005967350.1 )

internalin-A

NC_017546
(Listeria monocytogenes FSL R2-561)

9e-137

51) inlA
( YP_006683764.1 )

internalin A

NC_018588
(Listeria monocytogenes SLCC2372)

9e-137

52) inlA
( YP_006695263.1 )

internalin A

NC_018592
(Listeria monocytogenes SLCC5850)

9e-137

53) M640_01170
( YP_008300788.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

8e-136

54) LM1816_01762
( YP_008286260.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

8e-136

55) M644_13770
( YP_008285336.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

8e-136

56) M645_01700
( YP_008303780.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

8e-136

57) lse_2606
( YP_003465839.1 )

hypothetical protein

NC_013891
(Listeria seeligeri SLCC3954)

4e-87

• Sequence Alignments

1) LM5923_0442 in NC_013768


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1250 bits (4743),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 814/821 (99%), Positives = 818/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSTDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITS DGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNASEVETITEENL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGN+SEVET+TEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFIKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHF KETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

2) LM5578_0443 in NC_013766


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1250 bits (4743),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 814/821 (99%), Positives = 818/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSTDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITS DGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNASEVETITEENL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGN+SEVET+TEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFIKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHF KETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

3) LMRG_00102 in NC_017544


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1232 bits (4673),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 821/821 (100%), Positives = 821/821 (100%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

4) inlF in NC_018592


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1232 bits (4673),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 821/821 (100%), Positives = 821/821 (100%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

5) lmo0409 in NC_003210


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1227 bits (4656),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 817/821 (99%), Positives = 819/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAA QVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

6) LMKG_01500 in NC_017546


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1227 bits (4656),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 817/821 (99%), Positives = 819/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAA QVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

7) inlF in NC_018588


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1227 bits (4656),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 817/821 (99%), Positives = 819/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAA QVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

8) inlF in NC_018589


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1227 bits (4656),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 817/821 (99%), Positives = 819/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAA QVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

9) M642_14710 in NC_021823


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1226 bits (4651),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 815/821 (99%), Positives = 818/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLSKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANL+KIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDEETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYD ETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFIKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHF KETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

10) inlF in NC_018593


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1225 bits (4646),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 815/821 (99%), Positives = 818/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSTDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITS DGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEDVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTE+VVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFIKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHF KETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

11) M639_00460 in NC_021837


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score = 1221 bits (4631),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 815/821 (99%), Positives = 817/821 (99%), Gaps = 0/821 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLTKIQSSDFSNQMITNPERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANLTKIQ SDFSNQMITN ERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660
            QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK  720
            LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFT+EGWYDAEVGGTKWDFK
Sbjct  661  LYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFK  720

Query  721  TMKMPANDITLYAHFIKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780
            TMKMPANDITLYAHF KETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG
Sbjct  721  TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAG  780

Query  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821
            ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA
Sbjct  781  ENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

12) inlF in NC_018586


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  963 bits (3648),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 611/823 (75%), Positives = 738/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKAKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S  KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPLDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E LDY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTIS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFTI+
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQANFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQANFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNSNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QN+NITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

13) inlF in NC_018584


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

14) LM220_05422 in NC_021830


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

15) LM1816_01587 in NC_021829


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

16) inlF in NC_018587


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3644),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

17) inlF in NC_018591


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3644),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

18) M640_01000 in NC_021839


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

19) M644_13940 in NC_021827


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

20) M645_01530 in NC_021840


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3645),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 609/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEPT+PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YD+LLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

21) M643_12400 in NC_021826


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3644),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

22) M641_11745 in NC_021838


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  962 bits (3644),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/823 (74%), Positives = 737/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

23) M637_04750 in NC_021824


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  960 bits (3638),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 608/823 (74%), Positives = 736/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  +PPA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFLKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNF KTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPLDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E LDY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDGAVT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSAISMPAQNSNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSA S P+QN+NITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

24) MUO_02260 in NC_017728


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  957 bits (3626),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 735/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q + +G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

25) inlF in NC_012488


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  957 bits (3626),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 735/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q + +G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

26) inlF in NC_018642


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  957 bits (3626),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 735/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVVVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q + +G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  MPAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDINLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVT  780
            F+TMKMPANDI LYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P+QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

27) inlF in NC_002973


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  956 bits (3621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 736/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  +PAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPVQNNNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

28) inlA_5 in NC_019556


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  956 bits (3621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 736/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  +PAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPVQNNNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

29) inlF in NC_018585


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  956 bits (3621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 736/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  +PAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPVQNNNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

30) M638_13315 in NC_021825


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  956 bits (3621),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 607/823 (74%), Positives = 736/823 (90%), Gaps = 2/823 (0%)

Query  1    MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATLPAPINQIFPDADLAEGIRA  60
            MK+KNN+FKQ+I+IMTV+SLL+MVLGIQGNN+VKAAT  + PA+INQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   VLQKASVTDVVTQEELESITKLVVAGEKVASIQGIeyltnleylnlngnQITDISPLSNL  120
             LQK+SVTDVVT+EELESI++L V + K+ASI+G+EYLTNL +LNLNGNQITD+SPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  VKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSD  180
             KLT++YIG NKI+DIS+LQNLTN+ +LYL +++ISD+ PLANLT+MYSL LG+N N+SD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAY  240
            L+P+ NMT LN L VT S +KD+TP+A++T L  L+L+ NQIED+SPLA+LT L+ ++AY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  VNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKL  300
             N+ITDITPV+N+TRL+ L +G+N ITDLSP+ANL +LT L+++ NQI++I+ + DLT+L
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  KMLNVGSNQISDISVlnnlsqlnslflnnnqlGNEDMEVIGGLTNLTTLFLSQNHITDIR  360
              L + +N+ISDISVL+NL+++  L L  NQ+   D+ +IGGLTNLT+L L+QNHITDI 
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIV--DVKIIGGLTNLTSLQLTQNHITDIS  358

Query  361  PLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVN  420
            PLA+L+K++ +DF+NQ+I +  RNFSKTLSVPNNITSIDGTL++P TISNNGTYDAPN++
Sbjct  359  PLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLK  418

Query  421  WSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEE  480
            WS P+YLPEV+YTF Q +++G+ TS+Y+G+I QPL+E +DY+VTFN++GNTSEV TVTEE
Sbjct  419  WSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEE  478

Query  481  DLIPEPANPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDG  540
            +LIPEP++PTKQGYTFDGWYDAETGGTKWDFTTGQMPANDL LYAHFSVNSYQ NFDIDG
Sbjct  479  NLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDG  538

Query  541  AVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVS  600
             V NEAVVYD+LLNEPT+PTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV++YAHFT++
Sbjct  539  VVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTIN  598

Query  601  SYQVNFDIDGAVTNEAIVYDTLLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKIPAND  660
            +YQ NFDIDG V NE+I YDTLLNEP+TPTKQGYTFDGWYDAETGG KWDFKT  +PAND
Sbjct  599  NYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAND  658

Query  661  VTLYAHFTINNYQANFDIDGSVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWD  720
            VTLYAHFTINNYQANFDIDG+VT+E + YD+L+ EPT+P+K GF ++GWYDAEVGGTKWD
Sbjct  659  VTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWD  718

Query  721  FNTMKMPANDITLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPVQNNNITVT  780
            F+TMKMPANDITLYAHFSKETP+IPSP +  DS +TNG+ITINEPSATS P QNNNITVT
Sbjct  719  FKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVT  778

Query  781  AGENTPELTTAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA  823
            AGENT EL+TAKLPKTGDN PW+TLFAGILLSSSAFYIWRKKA
Sbjct  779  AGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA  821

31) LMLG_2940 in NC_017547


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  916 bits (3471),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 620/665 (94%), Positives = 635/665 (96%), Gaps = 4/665 (0%)

Query  1    MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60
            MKSKNNYFKQI TIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120
            ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300
            SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltqnHITDISPL  360
            TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  361  ANLSKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420
            ANL+KIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFnvegntsevetvteenL  480
            LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL  480

Query  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540
            IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV
Sbjct  481  IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVV  540

Query  541  TNEAVVYDTLLNEPTTPTKQGYTFDGWYDEETGGNKWDFKTMKMPANDVAFYAHFTINNY  600
            TNEAVVYD+LLNEPTTPTKQGYTFDGWYD ETGGNKWDFKTMKMPANDVAFYAHFTINNY
Sbjct  541  TNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNY  600

Query  601  QANFDIDGEVKNETIPYS--MNRPLQPNKVIHLMVG--MTQKQAERSGISKRRKCPRMMS  656
            QANFDIDGEVKNETI+Y   +N P  P K      G   ++  + + ++  +   +  ++
Sbjct  601  QANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVT  660

Query  657  LYMHI  661
            LY H+
Sbjct  661  LYAHF  665


 Score =  296 bits (1107),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 232/625 (38%), Positives = 398/625 (64%), Gaps = 42/625 (6%)

Query  62   LQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGN-QITDLSPLSNL  120
            +  + ++D+   ++L ++++L +  + I+ +  L  LT++  L L GN +I+DL+P+ N+
Sbjct  128  IGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNM  187

Query  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180
            T+L ++ + ++ + D++PL ++T++T L L DN+I DL PLA LT++ ++  + +++I+D
Sbjct  188  TRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIA-AYSNKITD  246

Query  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240
            + PV N+TRL+ L++ ++ + DL+P+A++  LT L L++NQI ++S L +LT+L +++  
Sbjct  247  ITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQ  306

Query  241  SNKITDITPVTNLTRLQYLDLGSNEITD------LSPVANLQKLTSLHLAN-NQITNISM  293
            +NKI+DI+ + NLT++ YL+LG N+I D      L+ +++LQ LT  H+++ + ++N++ 
Sbjct  307  NNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQ-LTQNHITDISPLANLTK  365

Query  294  LE--DLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGltnltslqltq  351
            ++  D++N     L+ N    +SV +N+T +    ++ + I +    ++     SL    
Sbjct  366  IQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYL  425

Query  352  nHI----TDISPLANLSKIQYSDFSNQMITNLERNFSKTLSVPNNITSID----GTLIAP  403
             ++    ++  P++  +  +YS+F  Q + +L  ++  T++V  N + ++      LI+ 
Sbjct  426  PEVKYTFSQKIPIGT-GTSNYSGFITQPLKEL-LDYKVTFNVEGNTSEVETVTEENLIPE  483

Query  404  ETISNNGTYDAPNLKWSLPNYLPEV---KYTFSQKIPIGTGTSNYSGFITQPLKELLDYK  460
             T + +  Y      W    Y +E    K  F+     + + + Y+ F  ++      Y+
Sbjct  484  PTSPTKQGYTFDG--W----YDAETGGTKWDFTTGQMPANDLTLYAHFSVNS------YQ  531

Query  461  VTFnvegntsevetvteenLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLT  520
              F+++G  ++   V +  L+ EPT+PTKQGYTFDGWYDAETGG KWDF T +MPAND++
Sbjct  532  ANFDIDGVVTNEAVVYDA-LLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVA  590

Query  521  LYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDEETGGNKWDFK  580
            +YAHF++N+YQANFDIDG V NE++ YDTLLNEPTTPTKQGYTFDGWYD ETGG KWDFK
Sbjct  591  FYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFK  650

Query  581  TMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIPYS--MNRPLQPNKVIHLMVG--MT  636
            T  MPANDV++YAHFTINNYQANFDIDG V +E + Y   +  P  P+K    + G   +
Sbjct  651  TKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDA  710

Query  637  QKQAERSGISKRRKCPRMMSLYMHI  661
            +  + + ++   +  +  ++LY H+
Sbjct  711  EVGGTKWDFKTMKMPANDITLYAHF  735


 Score =  181 bits (669),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 87/117 (75%), Positives = 106/117 (91%), Gaps = 0/117 (0%)

Query  480  LIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGV  539
            L+ EPT+PTKQGYTFDGWYDAETGGTKWDF T +MPAND+TLYAHF++N+YQANFDIDG 
Sbjct  620  LLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGA  679

Query  540  VTNEAVVYDTLLNEPTTPTKQGYTFDGWYDEETGGNKWDFKTMKMPANDVAFYAHFT  596
            VT+E V YD+L+ EPT+P+K G+T++GWYD E GG KWDFKTMKMPAND+++YAHF+
Sbjct  680  VTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDFKTMKMPANDITLYAHFS  736

32) LMLG_1991 in NC_017547


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  483 bits (1822),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 318/697 (46%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+DL PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKWDF
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FDIDG    +T+ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  248 bits (926),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 117/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KWDF T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FDIDG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  162 bits (598),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKWDF T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

33) M642_14825 in NC_021823


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  483 bits (1822),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 318/697 (46%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+DL PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKWDF
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FDIDG    +T+ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  248 bits (926),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 117/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KWDF T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FDIDG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  162 bits (598),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWDFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKWDF T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

34) inlA in NC_018593


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 316/697 (46%), Positives = 488/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+DL PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A F+ DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FDIDG    +T+ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  247 bits (921),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 160/209 (77%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  NLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A F+ DG   ++T+ Y+ LL+EPT PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDIDGKTTTQTVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FDIDG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  161 bits (596),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 72/140 (52%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A F+ DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

35) inlA in NC_018587


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

36) inlA in NC_018591


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

37) inlA in NC_018586


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

38) M637_04850 in NC_021824


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

39) M643_12500 in NC_021826


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

40) M641_11645 in NC_021838


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  482 bits (1818),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (611),  Expect = 7e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

41) MUO_02455 in NC_017728


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  481 bits (1813),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 312/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  +++NQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (610),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

42) inlA in NC_012488


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  481 bits (1813),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 312/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  +++NQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (610),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

43) inlA in NC_018642


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  481 bits (1813),  Expect = 6e-137, Method: Compositional matrix adjust.
 Identities = 312/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPVNQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  +++NQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  165 bits (610),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 75/140 (54%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

44) inlA in NC_013768


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  481 bits (1812),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 487/697 (70%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  162 bits (599),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

45) inlA in NC_013766


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  481 bits (1812),  Expect = 8e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 487/697 (70%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  162 bits (599),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

46) M639_00345 in NC_021837


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 314/697 (46%), Positives = 488/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+DL PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFIGWFDAKTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A +D DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  161 bits (596),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAKTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A +D DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

47) LMOG_02646 in NC_017545


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1809),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 487/697 (70%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDLDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+DL PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A F+ DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  162 bits (598),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A F+ DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

48) LMRG_00126 in NC_017544


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 312/697 (45%), Positives = 487/697 (70%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A F+ DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  162 bits (599),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A F+ DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

49) inlA in NC_003210


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  247 bits (922),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  162 bits (597),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

50) LMKG_01477 in NC_017546


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  247 bits (922),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  162 bits (597),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

51) inlA in NC_018588


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 313/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+G+EYL NL  +N++ NQ+TD++PL NLTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNVKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++V F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A FD DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  247 bits (922),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 115/209 (56%), Positives = 161/209 (78%), Gaps = 0/209 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG  T   V  + LL EP+ P K+G TF GW+DA+TGG KW+F T KMP+ND+
Sbjct  530  YQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDV  589

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             +YA+F+IN+Y A FD DG   ++T+ Y+ LL+EPT+PTK+GYTF GWYDA TGG KWDF
Sbjct  590  AFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDF  649

Query  618  ATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYD  677
             T  MPA+++TLYA+++ N+Y A FD+DG  T + V+Y++L+ EP +P+K+G+T+ GWYD
Sbjct  650  KTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYD  709

Query  678  EKTDGKKWDFATDKMPANDITLYAQFTKN  706
               +G KWDF T KMPANDITLYA+F+K+
Sbjct  710  AEVGGTKWDFKTMKMPANDITLYAHFSKE  738


 Score =  162 bits (597),  Expect = 8e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 105/140 (75%), Gaps = 0/140 (0%)

Query  498  FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++ +F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A FD DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

52) inlA in NC_018592


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  480 bits (1811),  Expect = 9e-137, Method: Compositional matrix adjust.
 Identities = 312/697 (45%), Positives = 487/697 (70%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDAALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF DA LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTNLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTFSQ + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+G TF GW+DA+TGGTKW+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDINLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A F+ DGV T+++V Y++LL+EPT PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP +PTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GYTF GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  162 bits (599),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 106/140 (76%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+G TF GW+DA+TGGTKW+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  NLYAQFSINSYTATFENDGVTTSQTVDYQGLLQEPTPPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A F+ DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

53) LM1816_01762 in NC_021829


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  477 bits (1799),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 310/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGT+W+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A +D DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GY+F GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  161 bits (594),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGT+W+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A +D DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

54) M640_01170 in NC_021839


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  477 bits (1799),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 310/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGT+W+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A +D DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GY+F GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  161 bits (594),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGT+W+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A +D DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

55) M644_13770 in NC_021827


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  477 bits (1799),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 310/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGT+W+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A +D DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GY+F GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  161 bits (594),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGT+W+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A +D DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

56) M645_01700 in NC_021840


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  477 bits (1799),  Expect = 8e-136, Method: Compositional matrix adjust.
 Identities = 310/697 (45%), Positives = 489/697 (71%), Gaps = 52/697 (7%)

Query  13   LVAILVFGSGVWINTSNGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQ  72
            +V++L+   G+    +N     A+ ++  ++INQIF D+ LAE +++ L K++VTD V++
Sbjct  17   VVSLLIMVLGI---QGNNDVKAATQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTK  73

Query  73   TDLDQVTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQI  132
             +L+ ++ L      I SI+GLEYL NL  +N++ NQ+TD++PL +LTKL +I + +N+I
Sbjct  74   EELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKI  133

Query  133  ADItplanltnltgltlfnnQITDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQL  191
            +DI+PL NLTN+T+L L +N+I+D+ PL NLT++  L L++N+ ISD++++  +T L++L
Sbjct  134  SDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNL  193

Query  192  SF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGIL  250
               G+ + DL PLA++T+L RL +S N++ D+S LA LT+L+++ A +N+I+DITP+  L
Sbjct  194  EVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNL  253

Query  251  TNLDELSLNGNQLKDIGtlasltnltdldlannQISNLAPLSGLTKLTELKLGANQISNI  310
            T L+ L L +N                      +I++L+P++ L KLT L L+ NQI+NI
Sbjct  254  TRLQYLDLGSN----------------------EITDLSPVANLQKLTSLHLANNQITNI  291

Query  311  SPlagltaltnlelnenqleDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYN  370
            S L +LT LT+L L++N++ DIS + NL ++TYL L +N+I D+  +++LT+L  L + +
Sbjct  292  SMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQ  351

Query  371  NKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSI  430
            N ++D+S+LANLT+I+    +++ I++L                        N+   +S+
Sbjct  352  NHITDISPLANLTKIQYSDFSNQMITNLER----------------------NFSKTLSV  389

Query  431  PNTVKNVTGALIAPATISDGGSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTV  490
            PN + ++ G+LIAP TIS+ G+Y  P++ W+LP+Y  EV YTF+Q + IG GT+ +SG +
Sbjct  390  PNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFI  449

Query  491  TQPLKAI--FNAKFHVDGKETTKE-VEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNF  547
            TQPLK +  ++  F+V+G+ +  E V   NL+ EP+ P K+GYTF GW+DA+TGGT+W+F
Sbjct  450  TQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDF  509

Query  548  STDKMPTNDIDLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYD  607
            +T++MP+ND+ LYA+FS+NSY A +D DGV T+++V Y++LL+EPT+PTK+GYTF GWYD
Sbjct  510  TTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYD  569

Query  608  AKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTK  667
            A TGG+KWDF T KMPA+++++YA+++ N+Y A FD+DG    +++ Y+ LL+EP TPTK
Sbjct  570  AETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTK  629

Query  668  AGYAFKGWYDEKTDGKKWDFATDKMPANDITLYAQFT  704
             GY+F GWYD  T+G KWDF T  MPAND+TLYA+FT
Sbjct  630  QGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFT  666


 Score =  161 bits (594),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 73/140 (53%), Positives = 107/140 (77%), Gaps = 0/140 (0%)

Query  498  FNAKFHVDGKETTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDI  557
            ++A+F++DG      +  + LL EP+ P K+GYTF GW+DA+TGGT+W+F T  MP+ND+
Sbjct  600  YQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDV  659

Query  558  DLYAQFSINSYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDF  617
             LYA+F+IN+Y A +D DG  T + V+Y++L+ EPT+P+K G+T+ GWYDA  GG KWDF
Sbjct  660  TLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKWDF  719

Query  618  ATSKMPAKNITLYAQYSANS  637
             T KMPA++ITLYA++S ++
Sbjct  720  KTMKMPANDITLYAHFSKET  739

57) lse_2606 in NC_013891


> U77367|1|G1|2347102|AAB67968.1|Listeria_monocytogenes_EGD|+|373..2838|inlF|-|internalin
Length=821

 Score =  315 bits (1181),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 247/597 (42%), Positives = 393/597 (66%), Gaps = 71/597 (11%)

Query  2    IKKRHSFFSFLAALLIVGSINLWV--GTSHEMVVQADSIDQPTPINQIFPDSALAEVMRY  59
            +K ++++F  + +++ V S+ + V    +++ V  A  +  P++INQIFPD+ LAE +R 
Sbjct  1    MKSKNNYFKQIITIMTVVSLLIMVLGIQGNNDVKAATQVAPPASINQIFPDADLAEGIRA  60

Query  60   QLGKSSVTDVVSQSELDNVTSVNGQKKEIISIEGVQYltnl-------------------  100
            +L KSSVTDVV++ EL++++ ++   K I SIEG++YLTNL                   
Sbjct  61   ELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNL  120

Query  101  ---tnlllAENNIRDIQPLENLTNLTVLNMIDNELTDISPlsnltnltklslGDDSII--  155
               T++ +++N+I DI PL+NLTN+T L ++DN+++D+ PL+NLT++  L LG++S I  
Sbjct  121  TKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISD  180

Query  156  ---------------------DVSPLAGLTNLINLYLTSYDLTDVSELAnltnltnlWLS  194
                                 D++PLA++T+L  L L+  ++ D+S LA LT+L N+   
Sbjct  181  LNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY  240

Query  195  SPKLSNVSVLSNFHNLETLQLRSTLVSDITPIANLKKLKLLDVSMNEIKDIsslselsnl  254
            S K+++++ ++N+  L+ L+L S  ++D++P+ANL+KL  L+++ N+I +IS L +L+NL
Sbjct  241  SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNL  300

Query  255  teltltDNHISDISALSELTNLNYLYLDVNQISDISALADLSNLEELYVMDQTITN-EPL  313
            T L L +N ISDIS L +LT++ YL L+ NQI D+  +++L+NL  L + ++ IT+  PL
Sbjct  301  TSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPL  360

Query  314  T---------------------FQTNIVINNTIKDENGALVTPLDISDNGSYTSPNITWN  352
            +                     F   + + N I   +G+L++P  IS+NG+Y +PN+ W+
Sbjct  361  ANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWS  420

Query  353  LPAYTDEVNYTFEKIGSIGNGPFYFTGTVYQPLEEVPATYNVIFDIDG-VQNSEEVVVDA  411
            LP Y  EV+YTF +  +IG G   ++G + QPL E+   Y+V F+++G   + E V  + 
Sbjct  421  LPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKEL-LDYKVTFNVEGNTSEVETVTEEN  479

Query  412  LLEEPAAPTKEGYTFTGWYDAKTGGEKWDFTTDKMPAKDITLYAQFSINNYKAIFDVDGT  471
            L+ EP++PTK+GYTF GWYDA TGG KWDFTT++MPA+D+TLYA+FS+N+Y+A FD+DG 
Sbjct  480  LIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGV  539

Query  472  TTSQTVNYQSLLTKPTDPTKEGYTFTGWYDAKTGGNKWDFTTDKMPANDITLYAQFS  528
             T+++V Y++LL  PT PTK+GYTF GWYDA TGGNKWDF T KMPAND+++YA+F+
Sbjct  540  VTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFT  596


 Score =  184 bits (681),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 107/200 (54%), Positives = 143/200 (72%), Gaps = 16/200 (8%)

Query  390  ATYNVIFDIDGVQNSEEVVVDALLEEPAAPTKEGYTFTGWYDAKTGGEKWDFTTDKMPAK  449
              Y+  FDIDG  ++E +  D+LL+EP++PTK+GYTF GWYDA TGG KWDF T  MPA+
Sbjct  598  NNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPAN  657

Query  450  DITLYAQFSINNYKAIFDVDGTTTSQTVNYQSLLTKPTDPTKEGYTFTGWYDAKTGGNKW  509
            D+TLYA+F+INNY+A FD+DG+ T + VNY++L+  PT P+K G+T+ GWYDA  GG KW
Sbjct  658  DVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTLEGWYDAEVGGTKW  717

Query  510  DFTTDKMPANDITLYAQFSKN------PENGGTDTPSNGNKTKPEQ-----PARENSTTI  558
            DF T KMPANDITLYA+FSK+      P++G    ++NG  T  E      P+++N+ T+
Sbjct  718  DFKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITV  777

Query  559  TAIEKST-----TLPKTGDN  573
            TA E++T      LPKTGDN
Sbjct  778  TAGENTTELATAKLPKTGDN  797


 Score =  183 bits (680),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 89/139 (65%), Positives = 114/139 (83%), Gaps = 0/139 (0%)

Query  390  ATYNVIFDIDGVQNSEEVVVDALLEEPAAPTKEGYTFTGWYDAKTGGEKWDFTTDKMPAK  449
             +Y+  FDIDGV  +E VV DALL+EP++PTK+GYTF GWYDA TGG+KWDF T KMPA+
Sbjct  528  NSYQANFDIDGVVTNEAVVYDALLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPAN  587

Query  450  DITLYAQFSINNYKAIFDVDGTTTSQTVNYQSLLTKPTDPTKEGYTFTGWYDAKTGGNKW  509
            D+++YA+F+INNY+A FD+DG   ++T+ Y++LL  PT PTK+GYTF GWYDA TGG KW
Sbjct  588  DVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKW  647

Query  510  DFTTDKMPANDITLYAQFS  528
            DF T  MPAND+TLYA+F+
Sbjct  648  DFKTKEMPANDVTLYAHFT  666