Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
5e-128 |
91 |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
1e-124 |
87 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
1e-123 |
84 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
2e-89 |
61 |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
1e-75 |
55 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
7e-76 |
56 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
8e-76 |
61 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
8e-75 |
56 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
3e-73 |
60 |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
7e-73 |
61 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
2e-72 |
54 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
1e-71 |
55 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
6e-72 |
55 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
7e-72 |
54 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
3e-69 |
55 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
2e-68 |
60 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
2e-66 |
53 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
2e-66 |
52 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
4e-66 |
50 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
4e-66 |
50 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
2e-65 |
54 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
4e-65 |
50 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
9e-65 |
51 |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
3e-64 |
49 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
3e-64 |
49 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
5e-61 |
53 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
1e-58 |
55 |
|
two component, sigma-54 specific, Fis family transcriptional regulator |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
3e-45 |
43 |
|
two-component response regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
4e-44 |
43 |
|
sigma-54 dependent DNA-binding response regulator |
NC_016830 (Pseudomonas fluorescens F113) |
4e-44 |
43 |
|
sigma-54 dependent DNA-binding response regulator |
NC_019670 (Pseudomonas sp. UW4) |
5e-44 |
43 |
|
Fis family transcriptional regulator |
NC_013960 (Nitrosococcus halophilus Nc 4) |
1e-40 |
44 |
|
sigma-54 dependent DNA-binding response regulator |
NC_002977 (Methylococcus capsulatus Bath) |
5e-40 |
42 |
|
Fis family transcriptional regulator |
NC_008340 (Alkalilimnicola ehrlichii MLHE-1) |
2e-38 |
41 |
|
transcriptional regulatory protein TyrR |
NC_007146 (Haemophilus influenzae 86-028NP) |
2e-28 |
42 |
|
transcriptional regulatory protein TyrR |
NC_009567 (Haemophilus influenzae PittGG) |
2e-28 |
42 |
|
transcriptional regulatory protein TyrR |
NC_022356 (Haemophilus influenzae KR494) |
3e-28 |
42 |
|
transcriptional regulatory protein |
NC_009566 (Haemophilus influenzae PittEE) |
4e-28 |
42 |
|
transcriptional regulatory protein tyrr |
NC_014920 (Haemophilus influenzae F3031) |
5e-28 |
42 |
|
transcriptional regulatory protein TyrR |
NC_014922 (Haemophilus influenzae F3047) |
7e-28 |
42 |
|
Tyrosine repressor protein TyrR |
NC_017451 (Haemophilus influenzae R2866) |
7e-28 |
42 |
|
transcriptional regulatory protein TyrR |
NC_016809 (Haemophilus influenzae 10810) |
8e-28 |
42 |
|
Tyrosine repressor protein TyrR |
NC_017452 (Haemophilus influenzae R2846) |
8e-28 |
42 |
|
transcriptional regulatory protein |
NC_000907 (Haemophilus influenzae Rd KW20) |
8e-28 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='U03853' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc