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Homologs of hrpS gene of U03852

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HrpS
( YP_234283.1 )

type III transcriptional regulator HrpS

NC_007005
(Pseudomonas syringae B728a)

6e-132

2) hrpS
( NP_791207.1 )

type III transcriptional regulator HrpS

NC_004578
(Pseudomonas syringae DC3000)

2e-119

3) hrpS
( YP_273530.1 )

type III transcriptional regulator HrpS

NC_005773
(Pseudomonas syringae 1448A)

4e-115

4) Pmen_0032
( YP_001185539.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

2e-93

5) hrpR
( YP_273529.1 )

type III transcriptional regulator HrpR

NC_005773
(Pseudomonas syringae 1448A)

2e-82

6) hrpR
( NP_791206.1 )

type III transcriptional regulator HrpR

NC_004578
(Pseudomonas syringae DC3000)

7e-81

7) HrpR
( YP_234282.1 )

type III transcriptional regulator HrpR

NC_007005
(Pseudomonas syringae B728a)

1e-80

8) Dd1591_1896
( YP_003004225.1 )

sigma54 specific transcriptional regulator, Fis family

NC_012912
(Dickeya zeae Ech1591)

4e-77

9) Pmen_0033
( YP_001185540.1 )

sigma-54 dependent trancsriptional regulator

NC_009439
(Pseudomonas mendocina ymp)

3e-76

10) hrpS
( YP_003883235.1 )

HrpS type III protein secretion system regulatory protein

NC_014500
(Dickeya dadantii 3937)

2e-75

11) Dd586_1893
( YP_003333457.1 )

sigma54 specific transcriptional regulator, Fis family

NC_013592
(Dickeya dadantii Ech586)

3e-75

12) PSEBR_a5366
( YP_004356874.1 )

Fis family transcriptional regulator

NC_015379
(Pseudomonas brassicacearum NFM421)

2e-74

13) hrpS
( YP_005210952.1 )

protein HrpS

NC_016830
(Pseudomonas fluorescens F113)

3e-74

14) rspS
( YP_006322245.1 )

type III secretion system transcriptional regulator RspS

NC_017911
(Pseudomonas fluorescens A506)

1e-73

15) Ser39006_2908
( YP_008523290.1 )

sigma54 specific transcriptional regulator, Fis family

NC_022268
(Serratia sp. ATCC 39006)

2e-72

16) hrpS
( YP_050185.1 )

sigma-54-dependent enhancer-binding protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

3e-71

17) PCC21_022790
( YP_006646935.1 )

HrpS

NC_018525
(Pectobacterium carotovorum PCC21)

4e-71

18) PC1_2201
( YP_003017776.1 )

Fis family sigma-54 specific transcriptional regulator

NC_012917
(Pectobacterium carotovorum PC1)

3e-69

19) rspR
( YP_002870393.1 )

putative type III secretion system, regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-68

20) D781_3924
( YP_007346299.1 )

sigma-54 interacting regulator

NC_020064
(Serratia marcescens FGI94)

7e-68

21) hrpS
( YP_001906474.1 )

Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster)

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-66

22) hrpS
( YP_005818266.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein

NC_017445
(Erwinia sp. Ejp617)

7e-67

23) hrpS
( YP_005804080.1 )

Sigma-54-dependent enhancer-binding protein HrpS

NC_017390
(Erwinia pyrifoliae DSM 12163)

8e-67

24) hrpS
( YP_002650063.1 )

Hrp/hrc secretion/translocation pathway protein HrpS

NC_012214
(Erwinia pyrifoliae Ep1/96)

8e-67

25) hrpS
( YP_003539957.1 )

sigma-54-dependent enhancer-binding protein

NC_013971
(Erwinia amylovora ATCC 49946)

6e-65

26) hrpS
( YP_003529897.1 )

sigma-54-dependent enhancer-binding protein HrpS

NC_013961
(Erwinia amylovora CFBP1430)

6e-65

27) H045_00470
( YP_007395666.1 )

type III secretion system transcriptional regulator RspS

NC_020209
(Pseudomonas poae RE*1-1-14)

4e-58

28) DCF50_p1771
( YP_006913758.1 )

Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

NC_018867
(Dehalobacter sp. CF)

1e-44

29) DHBDCA_p1762
( YP_006910773.1 )

Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains

NC_018866
(Dehalobacter sp. DCA)

1e-44

30) atoC
( YP_003039858.1 )

acetoacetate metabolism regulatory protein atoc

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

6e-42

31) L483_30985
( YP_008097932.1 )

Fis family transcriptional regulator

NC_021491
(Pseudomonas putida H8234)

1e-39

32) PSPPH_0312
( YP_272615.1 )

sigma-54-binding protein

NC_005773
(Pseudomonas syringae 1448A)

1e-39

33) PSPTO_5217
( NP_794948.1 )

sigma-54-binding protein

NC_004578
(Pseudomonas syringae DC3000)

1e-39

34) Psyr_0327
( YP_233437.1 )

sigma-54 factor, interaction region

NC_007005
(Pseudomonas syringae B728a)

9e-40

35) TOPB45_0054
( YP_004627098.1 )

Fis family transcriptional regulator

NC_015682
(Thermodesulfobacterium geofontis OPB45)

9e-40

36) PP4_52350
( YP_008116272.1 )

hypothetical protein

NC_021505
(Pseudomonas putida NBRC 14164)

1e-39

37) PputGB1_5223
( YP_001671441.1 )

putative sigma-54 specific transcriptional regulator

NC_010322
(Pseudomonas putida GB-1)

2e-39

38) Nhal_2343
( YP_003527818.1 )

Fis family transcriptional regulator

NC_013960
(Nitrosococcus halophilus Nc 4)

4e-39

39) B479_25340
( YP_007231900.1 )

sigma-54 dependent transcriptional regulator

NC_019905
(Pseudomonas putida PC9)

5e-39

40) PADK2_04665
( YP_006480928.1 )

transcriptional regulator

NC_018080
(Pseudomonas aeruginosa DK2)

1e-38

41) PLES_10441
( YP_002438650.1 )

putative transcriptional regulator

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-38

42) PAM18_1008
( YP_005973597.1 )

putative transcriptional regulator

NC_017548
(Pseudomonas aeruginosa M18)

1e-38

43) NCGM2_5127
( YP_005983333.1 )

transcriptional regulator

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-38

44) PA3932
( NP_252621.1 )

transcriptional regulator

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-38

45) PA14_13000
( YP_789185.1 )

transcriptional regulator

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-38

46) MDS_4670
( YP_004382453.1 )

sigma-54 factor interaction domain-containing protein

NC_015410
(Pseudomonas mendocina NK-01)

6e-39

47) PPS_5018
( YP_004704425.1 )

sigma-54 dependent transcriptional regulator

NC_015733
(Pseudomonas putida S16)

6e-39

48) PPUBIRD1_4959
( YP_005932714.1 )

Sigma-54 dependent transcriptional regulator

NC_017530
(Pseudomonas putida BIRD-1)

7e-39

49) PP_5166
( NP_747267.1 )

Fis family transcriptional regulator

NC_002947
(Pseudomonas putida KT2440)

7e-39

50) M062_20795
( YP_008134566.1 )

Fis family transcriptional regulator

NC_021577
(Pseudomonas aeruginosa RP73)

8e-39

51) PputW619_0299
( YP_001747174.1 )

putative sigma-54 specific transcriptional regulator

NC_010501
(Pseudomonas putida W619)

1e-38

52) G655_05020
( YP_007707853.1 )

putative transcriptional regulator

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-38

53) flbD
( YP_006535085.1 )

sigma-54 dependent transcriptional regulator

NC_018220
(Pseudomonas putida DOT-T1E)

2e-38

54) AvCA_31690
( YP_007894117.1 )

Sigma54 -dependent activator protein

NC_021149
(Azotobacter vinelandii CA)

4e-38

55) AvCA6_31690
( YP_007899166.1 )

Sigma54 -dependent activator protein

NC_021150
(Azotobacter vinelandii CA6)

4e-38

56) Avin_31690
( YP_002800307.1 )

Sigma54 -dependent activator protein

NC_012560
(Azotobacter vinelandii DJ)

4e-38

57) H045_22055
( YP_007399967.1 )

sigma-54-binding protein

NC_020209
(Pseudomonas poae RE*1-1-14)

4e-38

58) Pput_5073
( YP_001270375.1 )

sigma-54 factor interaction domain-containing protein

NC_009512
(Pseudomonas putida F1)

7e-38

59) YSA_04462
( YP_006386302.1 )

sigma-54 factor interaction domain-containing protein

NC_017986
(Pseudomonas putida ND6)

7e-38

60) PSPA7_1175
( YP_001346560.1 )

transcriptional regulator

NC_009656
(Pseudomonas aeruginosa PA7)

4e-37

61) GAU_2190
( YP_002761702.1 )

putative response regulator

NC_012489
(Gemmatimonas aurantiaca T-27)

2e-36

62) PCA10_01930
( YP_008100530.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

1e-35

63) PSEEN5263
( YP_610671.1 )

sigma-54 dependent transcriptional regulator

NC_008027
(Pseudomonas entomophila L48)

1e-35

64) SCE1572_16595
( YP_008149739.1 )

hypothetical protein

NC_021658
(Sorangium cellulosum So0157-2)

3e-35

65) Pfl01_0222
( YP_345955.1 )

response regulator receiver domain-containing protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

2e-34

66) PFLU0214
( YP_002869907.1 )

putative sigma-54 dependent regulatory protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-33

67) PflA506_0225
( YP_006321768.1 )

sigma-54-binding protein

NC_017911
(Pseudomonas fluorescens A506)

4e-33

68) PSEBR_a233
( YP_004351370.1 )

sigma-54 dependent regulatory protein

NC_015379
(Pseudomonas brassicacearum NFM421)

1e-32

69) Pmen_4342
( YP_001189821.1 )

sigma-54 factor interaction domain-containing protein

NC_009439
(Pseudomonas mendocina ymp)

6e-30

• Sequence Alignments

1) HrpS in NC_007005


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  463 bits (1743),  Expect = 6e-132, Method: Compositional matrix adjust.
 Identities = 283/290 (98%), Positives = 288/290 (99%), Gaps = 0/290 (0%)

Query  13   AERVPNLGIVAESISQLGIDVLLSGETGTGKDTIARRIHNMSGRQGRFVPMNCAAIPESL  72
            AERVPNLGIVAESISQLGIDVLLSGETGTGKDT ARRIHNMSGRQGRFVPMNCAAIPESL
Sbjct  13   AERVPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESL  72

Query  73   AESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERL  132
            AESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERL
Sbjct  73   AESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERL  132

Query  133  GSTSTINLDICVIASAQACLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTR  192
            GSTSTI+LDICVIASAQA LDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTR
Sbjct  133  GSTSTIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTR  192

Query  193  FVAASAKELSVPIPDVCPLLQQVLTGHHWPGNIRELKAAAKRHVLGFPLLGADSQTEEHL  252
            FVAASAKEL+V+IPDVCPLLQQVLTGH+WPGNIRELKAAAKRHVLGFPLLGADSQTEEH+
Sbjct  193  FVAASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHM  252

Query  253  ACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302
            ACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI
Sbjct  253  ACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

2) hrpS in NC_004578


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  421 bits (1585),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 247/287 (87%), Positives = 273/287 (96%), Gaps = 0/287 (0%)

Query  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTIARRIHEMSGRKGRLVAMNCAAIPESLAES  75
            VPNLGIVAESISQLGIDVLLSGETGTGKDT ARRIH+MSGR+GR+V+MNCAAIPESLAES
Sbjct  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAES  75

Query  76   ELFGVVSGAYTGADRSRVGYVEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGST  135
            ELFGVVSGAYTGADRSR+GY+EAAQGGTLYLDEIDSMPL+LQAKLLRVLETRALERLGST
Sbjct  76   ELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGST  135

Query  136  STIKLDICVIASAQCSLDDAVERGQFRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTA  195
            STI LDICVIASAQ SLDDAVE G+FRRDLYFRLNVLTLKLPPLR+Q++RI+PLFTRF A
Sbjct  136  STIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVA  195

Query  196  AAARELGVPVPDVCPLLHKVLLGHDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACG  255
            A+A+EL V++PDVCPLL++VL GH WPGNIRELKAAAKRHVLGFPLLGA++Q EEH+ACG
Sbjct  196  ASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACG  255

Query  256  LKSQLRVIEKALIQESLKRHDNCVDSVSLELDVPRRTLYRRIKELQI  302
            LK QLR IEKALIQ++LKRH NC+D+ SLELD+PRRTLYRRIKEL I
Sbjct  256  LKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

3) hrpS in NC_005773


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  407 bits (1530),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 257/288 (90%), Positives = 277/288 (97%), Gaps = 0/288 (0%)

Query  15   RVPNLGIVAESISQLGIDVLLSGETGTGKDTIAQRIHTISGRKGRLVAMNCAAIPESLAE  74
            RVPNLGIVAESISQLGIDVLLSGETGTGKDT A+RIH +SGR+GR+V+MNCAAIPESLAE
Sbjct  15   RVPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAE  74

Query  75   SELFGVVSGAYTGADRSRVGYIEAAQGGTLYLDEIDSMPLSLQAKLLRVLETRALERLGS  134
            SELFGVVSGAYTGADRSR+GYIEAAQGGTLYLDEIDSMPL+LQAKLLRVLETRALERLGS
Sbjct  75   SELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGS  134

Query  135  TSTIKLDVCVIASAQSSLDDAVEQGKFRRDLYFRLNVltlqlpplrtqpERILPLFKRFM  194
            TSTI LD+CVIASAQ+SLDDAVE+GKFRRDLYFRLNVLTL+LPPLR QPERILPLF RF+
Sbjct  135  TSTIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFV  194

Query  195  AAAAKELNVASADVCPLLQQVLLGHEWPGNIRELKAAAKRHVLGFPVLGVDPQSEEHLAC  254
            AA+AKELNVA +DVCPLLQQVL GH WPGNIRELKAAAKRHVLGFP+LG D+Q+EEH+AC
Sbjct  195  AASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMAC  254

Query  255  GLKSQLRAIEKALIQQSLKRHRNCIDAASLELDMPRRTLYRRIKELQI  302
            GLK QLRAIEKALIQQ+LKRHRNCIDAASLELD+PRRTLYRRIKEL I
Sbjct  255  GLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

4) Pmen_0032 in NC_009439


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  334 bits (1255),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 192/287 (67%), Positives = 244/287 (86%), Gaps = 2/287 (0%)

Query  17   LPNLEVVASSISELNIDVLLTGETGSGKDTLAQYLHKLSGRKGPFVAMNCAAIPESLFES  76
            +PNL +VA SIS+L IDVLL+GETG+GKDT A+ +H++SGR+G FV+MNCAAIPESL ES
Sbjct  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAES  75

Query  77   ELFGVTSGAYTGADHSRMGYVEAAQGGTLYLDEIDSMPAFLQAKLLRVLETRQIERLGST  136
            ELFGV SGAYTGAD+SRMGY+EAAQGGTLYLDEIDSMP  LQAKLLRVLETR +ERLGST
Sbjct  76   ELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGST  135

Query  137  TPVPLDICVVASAQRSLDALVEQGEFRRDLYFRLNVLTLRLPALRQKREWIIPMFERFAF  196
            + + LDICV+ASAQ SLD  VE+G FRRDLYFRLNVLTL+LP+LR++ E+I+P+F RF  
Sbjct  136  STIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVA  195

Query  197  EASQDMDTALPVIDPAIEHVLLNHDWPGNLRELKSAAKRHVLGINLLGIE--AEQPIECD  254
             ++++++ A+P + P +++VL  H WPGN+RELK+AAKRHVLG+ LLG +  +E+ + C+
Sbjct  196  ASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACG  255

Query  255  LKCQLRLIEKVLIQESLQRHEHCIEAVLHELDIPRRTLYHRMKELDV  301
            LK QLR IEK LIQ++L+RH +CI+A   ELDIPRRTLY+R+KEL +
Sbjct  256  LKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

5) hrpR in NC_005773


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  298 bits (1117),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 177/274 (65%), Positives = 224/274 (82%), Gaps = 0/274 (0%)

Query  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            L++D+LL GETGTGKDT A RIH++S+R G FV MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTEFIPLDLRVIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPL+LQAKLLRVLE+R++ERLGST  I LD+ VIASA
Sbjct  89   DRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQEIAAEFQRPVPVL  210
            Q +LD+ VE+G FRRDL+FRLNVLTL LP+LR + E+ILPLF +F    A E++ ++P +
Sbjct  149  QASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDV  208

Query  211  DNGRVQILLSHDWPGNVRELKSAAKRFVLGFPLLGAEPMDARDPVTGLRMQMRVIEKMLI  270
                 Q+L +H WPGN+RELK+AAKR VLGFPLLGA++    +   GL+ Q+R IEK LI
Sbjct  209  CPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKFQLRAIEKALI  268

Query  271  QDALKRHRHNVDAVLQELELPRRTLYHRMKELGV  304
            Q+ALKRHR+ +DA   EL++PRRTLY+R+KEL++
Sbjct  269  QQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

6) hrpR in NC_004578


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  293 bits (1097),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 178/274 (65%), Positives = 225/274 (83%), Gaps = 0/274 (0%)

Query  31   LDMDLLLCGETGTGKDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            L++D+LL GETGTGKDT A RIH++S+R G FV MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPL+LQAKLLRVLE+R++ERLGST  I +D+ +IASA
Sbjct  89   DRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPAL  210
            Q +LD+ VE+G FRRDL+FRLNVLTL LP+LR + E+ILPLF +F  + A E+  + P +
Sbjct  149  QASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDV  208

Query  211  DSGRVQLLLSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLI  270
             +   Q+L +H WPGNIRELK+AAKR VLGFPLLGAD+    + A GL+ Q+R IEK LI
Sbjct  209  CPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKFQLRAIEKALI  268

Query  271  QDALKRHRHNFDAVLQELELPRRTLYHRMKELGV  304
            Q+ALKRHR+ +DA   EL++PRRTLY+R+KEL++
Sbjct  269  QQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

7) HrpR in NC_007005


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  292 bits (1094),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 175/274 (64%), Positives = 223/274 (82%), Gaps = 0/274 (0%)

Query  31   MDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGV  90
            +++D+LL GETGTGKDT A RIH++S+R G FV MNCAAIPESLAES+LFGVV+GA+TG 
Sbjct  29   LGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGA  88

Query  91   CRAREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTDFIPLDLRVIASA  150
             R+R GYIEA+ GGTLYLDEIDSMPL+LQAKLLRVLE+R++ERLGST  I LD+ VIASA
Sbjct  89   DRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASA  148

Query  151  QRPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQFTQDVAAESGRSVPTL  210
            Q +LD+ VE+G FRRDL+FRLNVLTL+LP+LR + E+ILPLF +F    A E   ++P +
Sbjct  149  QASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDV  208

Query  211  DNRRVQILLSHDWPGNVRELKSAAKRFVLGLPLLGAEPVEARDPVTGLRMQMRVIEKMLI  270
                 Q+L +H WPGN+RELK+AAKR VLG+PLLGA++    +   GL+ Q+R IEK LI
Sbjct  209  CPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKFQLRAIEKALI  268

Query  271  QDALKRHRHNFDAVLEELELPRRTLYHRMKELGV  304
            Q+ALKRHR+ +DA   EL++PRRTLY+R+KEL++
Sbjct  269  QQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

8) Dd1591_1896 in NC_012912


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  281 bits (1051),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 160/289 (56%), Positives = 231/289 (80%), Gaps = 4/289 (1%)

Query  32   SLASLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESEL  91
            +L+ + ++I+ L +D++L GETGTGKDT ARRIH++SG  G +V++NCAA+PE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  92   FGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQF  151
            FGVVSGAYTGA RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE+R++ERLGST  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  152  KPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTDIILPLFQRFLHDA  211
              +D+ VI ++Q++L+  V+EG+FRRDLYFRL+ + ++LP LR + + ILPLF RF+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  212  AARLKLSVPGVSVIMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPIVADGDGAESDTPL  271
            A  L++++P+V  ++Q+ L  H WPGNIRELKAAA R VLG+   P+++ +  +E + + 
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGF---PLLGADSQTEEHMA-  253

Query  272  TSLKVRLRRIERFLIQEALQRNDHCIDTVVSELGIPKRTLYHRIKLLNV  320
             +LK +LR IE+ LIQ+AL+R+ +CID+   EL+IP+RTLY+RIK L++
Sbjct  254  CGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

9) Pmen_0033 in NC_009439


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  278 bits (1039),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 170/292 (59%), Positives = 228/292 (79%), Gaps = 6/292 (2%)

Query  19   VPELGITLSA-GHFRMDLLLCGETGTGKDVLARHIHDLSGRTGAFVGINCAAIPEALAES  77
            VP+LGI   + +++ +D+LL GETGTGKD  AR+IH++SGR G FV +NCAAIPE+LAES
Sbjct  16   VPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAES  75

Query  78   QLFGVASGAFTGANRSRQGYIEASNDGTLYLDEIDSMPLQLQAKLLRVLETRGVERLGTT  137
            +LFGV SGA+TGA+RSR GYIEA+++GTLYLDEIDSMPL LQAKLLRVLETR++ERLG+T
Sbjct  76   ELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGST  135

Query  138  KFIPLNLRIIASTQRPLEELVEQGLFRRDLLFRLNAMTLSLPPLRQRRELILPLFKRFTR  197
              I L++ +IAS+Q +L++ VE+G FRRDL FRLN +TL LPPLR++ E ILPLF RF  
Sbjct  136  STIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVA  195

Query  198  SLGAKQANGAQALDSQLIQLLLSHPWPGNIRELKSAAKRYVIGLPPIDAGVLADLEDGDF  257
            + +     +   + + L Q+L +H WPGNIRELK+AAKR V+G+P     +L+   + + 
Sbjct  196  ASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFP-----LLGADSQTEE  250

Query  258  PHDRGLKKRMRAVEKMLIQDALKRHKNGLEAVAEELGISRRTLYQRIKELDV  309
                GLK ++RA+EK LIQ+ALKRH+N ++A + EL+I+RRTLY+RIKEL +
Sbjct  251  HMACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

10) hrpS in NC_014500


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 158/291 (55%), Positives = 228/291 (79%), Gaps = 6/291 (2%)

Query  32   SLSSLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCAAVPETLAESEL  91
            +L+ + ++I+ L +D++L GETGTGKDT ARRIH++SG  G +V++NCAA+PE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  92   FGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQF  151
            FGVVSGAYTGA RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE+R++ERLGST  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  152  KPVDMRVIVATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFERFLLEA  211
              +D+ VI ++Q++L+  V+EG+FRRDLYFRL+ + ++LP LR + E ILPLF RF+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  212  SARLKRPAPGLSAIIQEQLLMHGWPGNIRELKAAAERWVLGLSPVPIASDGDVQVMGEDT  271
            +  L+ + P++ +++Q+ L  H WPGNIRELKAAA R VLG++ +   S+ + ++     
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMA----  253

Query  272  PLTSLKVRLRRIERFLIQEALQRNDHCIDTVVNELGIPKRTLYHRIKLLNV  322
               +LK +LR IE+ LIQ+AL+R+ +CID+   EL+IP+RTLY+RIK L++
Sbjct  254  --CGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

11) Dd586_1893 in NC_013592


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  274 bits (1026),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 159/288 (56%), Positives = 228/288 (80%), Gaps = 4/288 (1%)

Query  33   LSSLIHTIAPLHVDIVLEGETGTGKDTLARRIHQLSGCPGPLVAVNCAAVPETLAESELF  92
            L+ + ++I+ L +D++L GETGTGKDT ARRIH++SG  G +V++NCAA+PE+LAESELF
Sbjct  19   LGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELF  78

Query  93   GVVSGAYTGASRSRAGYLEIADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFK  152
            GVVSGAYTGA RSR GY+E A+ G L+LDEIDSMPL+LQAK+LRVLE+R++ERLGST   
Sbjct  79   GVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTI  138

Query  153  PVNMRVIVATQTPLHKLVEKGRFRRDLYFRLDTVKIQLPTLRSRTEIILPLFQRFLHDAA  212
             +++ VI ++Q++L+  VE G+FRRDLYFRL+ + ++LP LR + E ILPLF RF+  +A
Sbjct  139  HLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASA  198

Query  213  ARLKRPVPGVSAMMQEQLLMHDWPGNIRELKAAAERWVLGLSPVPVAADGGKAGNDTPLT  272
              L+ ++P+V +++Q+ L  H WPGNIRELKAAA R VLG+   P+ + ++++ ++ +  
Sbjct  199  KELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGF---PLLGADSQTEEHMA-C  254

Query  273  SLKVRLRRIERFLIQEALQRNDHCIDNVVHELGIPKRTLYHRIKLLNV  320
            +LK +LR IE+ LIQ+AL+R+ +CID    EL+IP+RTLY+RIK L++
Sbjct  255  GLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

12) PSEBR_a5366 in NC_015379


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  272 bits (1016),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/287 (58%), Positives = 221/287 (78%), Gaps = 3/287 (1%)

Query  19   NLEAFVQSVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
            NL    +S++ L IDVLL GETGTGKDT A +IH MSG  G+FV++NCAAIPE+LAES+L
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  79   FGANTGAFTGANQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQS  138
            FG  +GA+TGA+++R G++EAA+ GTLYLDEIDSMPL+LQAKLLRVLE+R+++RLGST +
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            I +++ VIASAQ +L++ VE G FRRDLYFRLN+++LKLPPLR + ERI+PLF  +V   
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  199  AQALDRPYVAPSPALLRQLLGYAWPGNIRELQSAAKRYVLGLPALPRAEQL-EHNSSTLK  257
            A+ L+ +     P L + L G  WPGNIREL++AAKR VLG+P L    Q  EH +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  258  LKEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQI  304
            +  +L+ +EK LI++ ++RH++CID    EL+I+RRTLY R+K L I
Sbjct  258  F--QLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

13) hrpS in NC_016830


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  271 bits (1014),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 164/287 (58%), Positives = 218/287 (76%), Gaps = 3/287 (1%)

Query  19   NLEAFVQCVAPLMIDVLLRGETGTGKDTLAEKIHRMSGCSGKFVAINCAAIPETLAESQL  78
            NL    + ++ L IDVLL GETGTGKDT A +IH MSG  G+FV++NCAAIPE+LAES+L
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  79   FGANTGAFTGASQNRAGFVEAAHNGTLYLDEIDSMPLGLQAKLLRVLESRTVQRLGSTQN  138
            FG  +GA+TGA ++R G++EAA+ GTLYLDEIDSMPL+LQAKLLRVLE+R+++RLGST  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  139  IPVNMRVIASAQCPLGEMVERGEFRRDLYFRLNIISLKLPPLRSRKERIVPLFQSLVRRE  198
            I +++ VIASAQ +L++ VE G FRRDLYFRLN+++LKLPPLR + ERI+PLF  +V   
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  199  AQALDRPYVAPSPALLRQLIGYAWPGNIRELQSAAKRYVLGLPALPRAEQL-EHNSSTLK  257
            A+ L+ +     P L + L G  WPGNIREL++AAKR VLG+P L    Q  EH +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  258  LKEHLQQFEKILIEDCMRRHHHCIDKVIAELGIARRTLYYRMKCLQI  304
            +  +L+ +EK LI++ ++RH++CID    EL+I+RRTLY R+K L I
Sbjct  258  F--QLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

14) rspS in NC_017911


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  269 bits (1004),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 161/279 (58%), Positives = 222/279 (80%), Gaps = 0/279 (0%)

Query  26   NNTAALNVDILLLGETGTGKDTLAQRIHRLSGRRGNFVAVNCAAIPESLAESQLFGVNSG  85
            ++ + L +D+LL GETGTGKDT A+RIH +SGR+G FV++NCAAIPESLAES+LFGV SG
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  86   AYTGAVQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLECRGVERLGSTRFISVDMR  145
            AYTGA +SR G++EAA+ GTLYLDEIDSMPL+LQAKLLRVLE R++ERLGST  I +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  146  VIASAQQSLQIMVDQGAFRRDLYFRLNVVNIELPALRDRRERIIPLFLQMIQEEADQFNC  205
            VIASAQ SL+  V++G FRRDLYFRLNV+ + LP+LRD+ ERI+PLF + +   A ++N 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  206  TPPSPSDGLLHELLCHPWLGNVRELRSAAKRFVLGLPPLSAPACRQPPPQTDLKARLQQI  265
            + P     L + L  H W GN+REL++AAKR VLG+P L+A +  +     +LK +L+ I
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKFQLRAI  263

Query  266  EKALIEESMYRHQHCVDTVAIELGVAKRTLYYRMKQLNI  304
            EKALI++++ RH++C+D+ ++EL++++RTLY R+K+L+I
Sbjct  264  EKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

15) Ser39006_2908 in NC_022268


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  265 bits (992),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 160/284 (57%), Positives = 216/284 (77%), Gaps = 1/284 (0%)

Query  34   LSLIND-IAPLNVDIVLEGETGTGKDTLARRIHKLSGCSGPLVAVNCAAIPESLAESELF  92
            L+++ + I+ L +D++L GETGTGKDT ARRIH++SG  G +V++NCAAIPESLAESELF
Sbjct  19   LGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELF  78

Query  93   GVVSGAYTGANRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLENRGIERLGSTQFK  152
            GVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLGST   
Sbjct  79   GVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTI  138

Query  153  AVDMRVIVATQTPLSKLVEEGRFRRDLYFRLDTVKIQLPTLRSRIDIILPMFQRFTREAS  212
             +D+ VI ++Q++L   VEEG+FRRDLYFRL+ + ++LP LR + + ILP+F RF   ++
Sbjct  139  HLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASA  198

Query  213  ARLKRSSPPIPVSVHERLLTHSWQGNIRELKAAAERWVLGLPPLPMVMETSAQHHPLLKE  272
              L+ + P +   +++ L  H W GNIRELKAAA R VLG+P L    +T  +    LK 
Sbjct  199  KELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

Query  273  RLRRIEKFLIQDALTRNGHCIDDVVTELGIPKRTLYHRIKLLNV  316
            +LR IEK LIQ+AL R+ +CID    EL+IP+RTLY+RIK L++
Sbjct  259  QLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

16) hrpS in NC_004547


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  261 bits (977),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 152/286 (54%), Positives = 220/286 (77%), Gaps = 0/286 (0%)

Query  54   SSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHQISQCSGPLVAVNCAAVPENLAESE  113
            ++L+ + + I+ L +D++L GETGTGKDT A RIH++S   G +V++NCAA+PE+LAESE
Sbjct  17   PNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESE  76

Query  114  LFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQ  173
            LFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRVLE+R++ RLGST 
Sbjct  77   LFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTS  136

Query  174  FTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQE  233
               +D+ VI ++Q++L + VE G FRRDLYFRL+ + ++LP LR +++ ILPLF RF   
Sbjct  137  TIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAA  196

Query  234  AAVRLRMTLPPMTAEIDEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQQLLHPRPLQL  293
            +A  L +++P + + +++ L  H WPGNIRELKAAA R  +G++ L+   Q  +  +  L
Sbjct  197  SAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGL  256

Query  294  KDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNV  339
            K +L+ IEK LIQ+AL+RH +CID   +EL+IP+RTLY+R+K L++
Sbjct  257  KFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

17) PCC21_022790 in NC_018525


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  261 bits (975),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 152/286 (54%), Positives = 220/286 (77%), Gaps = 0/286 (0%)

Query  56   SSLAPIINVIAPLNVDIVLEGETGTGKDTLANRIHQLSRCSGPLVAVNCAAVPENLAESE  115
            ++L+ + + I+ L +D++L GETGTGKDT A RIH++S   G +V++NCAA+PE+LAESE
Sbjct  17   PNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESE  76

Query  116  LFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQ  175
            LFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRVLE+R++ RLGST 
Sbjct  77   LFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTS  136

Query  176  FTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQE  235
               +D+ VI ++Q++L + VE G FRRDLYFRL+ + ++LP LR +++ ILPLF RF   
Sbjct  137  TIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAA  196

Query  236  AAVRLKMTLPPMTAEIHEQLLTHSWPGNIRELKAAADRWALGLSPLAEIQPLLHPRPLQL  295
            +A  L++++P + + +++ L  H WPGNIRELKAAA R  LG++ L+      +  +  L
Sbjct  197  SAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGL  256

Query  296  KDRLKRIEKFLIQDALRRHDHCIDDVIVELGIPKRTLYHRLKVLNV  341
            K +L+ IEK LIQ+AL+RH +CID   +EL+IP+RTLY+R+K L++
Sbjct  257  KFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

18) PC1_2201 in NC_012917


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  254 bits (950),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 151/286 (53%), Positives = 216/286 (76%), Gaps = 0/286 (0%)

Query  52   SSLSPIINVIAPLNVDIVLEGETGTGKDTLANRIHRLSRCSGPLVAVNCAAVPENLAESE  111
            ++L+ + + I+ L +D++L GETGTGKDT A RIH +S   G +V++NCAA+PE+LAESE
Sbjct  17   PNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESE  76

Query  112  LFGVVSGAYTGANRSRAGYLESADKGILFLDEIDSMPMTLQAKMLRVLESRGVKRLGSTQ  171
            LFGVVSGAYTGA+RSR GY+E+A+ G L+LDEIDSMP++LQAK+LRVLE+R++ RLGST 
Sbjct  77   LFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTS  136

Query  172  FTPVDMRVIVATQTPLLQLVEKGLFRRDLYFRLDTVKIQLPTLRSRSDLILPLFQRFSQE  231
               +D+ VI ++Q++L + VE G FRRDLYFRL+ + ++LP LR +++ ILPLF RF   
Sbjct  137  TIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAA  196

Query  232  AAVRLRMTQPPMTAEIYEQLLTHSWPGNIRELKAAADRWAMGLSPLAEIQPLLHPRPLQL  291
            +A  L ++ P + + + + L  H WPGNIRELKAAA R  +G++ L+      +  +  L
Sbjct  197  SAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGL  256

Query  292  KDRLKRIEKFLIQDALRRHGHCIDDVIVELGIPKRTLYHRLKVLNV  337
            K +L+ IEK LIQ+AL+RH +CID   +EL+IP+RTLY+R+K L++
Sbjct  257  KFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

19) rspR in NC_012660


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  252 bits (943),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 157/286 (55%), Positives = 219/286 (77%), Gaps = 0/286 (0%)

Query  19   PDIEEILSGTAQLNIDILLLGETGTGKDTLAQRIHRLSGRRGSFIAVNCAAIPETLAESQ  78
            P++  +  + +QL ID+LL GETGTGKDT A+RIH +SGR+G F+++NCAAIPE+LAES+
Sbjct  17   PNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESE  76

Query  79   LFGVNSGAYTGAVQSRAGFIEAAHLGTLYLDEIDSMPLSLQAKLLRTLESRGVERLGSTR  138
            LFGV SGAYTGA +SR G+IEAA+ GTLYLDEIDSMPL+LQAKLLR LE+R++ERLGST 
Sbjct  77   LFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTS  136

Query  139  FIPVDMRVIASAQQSLYEMVERGTFRRDLYFRLSVVNIQLPSLRECRDRIIPLFLTMIRQ  198
             I +D+ VIASAQ SL + VE G FRRDLYFRL+V+ ++LP+LR+  +RI+PLF   +  
Sbjct  137  TIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAA  196

Query  199  EAESFKCPYpqppssllqqllCHPWPGNVRELSSTAKRFVLGLPPLSVRGKNPKISEASL  258
             A  ++ + P+  + L Q L  H WPGN+REL ++AKR VLG+P L+  ++       +L
Sbjct  197  SAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGL  256

Query  259  KERLQRIEKSLIEESLHRHNGNVDLAAADLRVAKRTFYYRMKQLGI  304
            K +L+ IEK+LI+++L RH   +D A+ +L +++RT+Y R+K+L+I
Sbjct  257  KFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

20) D781_3924 in NC_020064


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  250 bits (933),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 159/281 (57%), Positives = 213/281 (76%), Gaps = 1/281 (0%)

Query  44   LTKIVAPLHVDVLLEGETGTGKDTLARRIYELSGGNGPFVPVNCGAIPESLAESELFGVE  103
            ++  ++ L +DVLL GETGTGKDT ARRI ++SG +G FVP+NC+AIPESLAESELFGV 
Sbjct  22   VAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVV  81

Query  104  AGAYTGASHARAGYLETANNGILFLDEIDSMPLTVQAKLLRVLETRTITRLGSTKPISLH  163
            +GAYTGA ++R GY+E+A+ G L+LDEIDSMPL++QAKLLRVLETR++ RLGST  I L+
Sbjct  82   SGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLD  141

Query  164  LRVIVAAQTPLEQLVEAGRFRRDLCFRLNTIKLETPTLRSRPELIIPLFRRFAIESALRL  223
            + VI +AQ++L++ VE G+FRRDL FRLN + L  P LR +PE I+PLF RF   SA  L
Sbjct  142  ICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  224  GMPHPPRSTALDEALLLHCWPGNLRELKAAAERFILGLPPLN-QALPQESGAVLLKERLK  282
             ++ P     L++ L  H WPGN+RELKAAA R +LG+P L  ++  +E  A  LK +L+
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKFQLR  261

Query  283  RIERSLIHDCLhrhdhriddvvhELGIPRRTLYHRLKQLNI  323
             IE++LI++ L RH + ID    EL+IPRRTLY+R+K+L+I
Sbjct  262  AIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

21) hrpS in NC_010694


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  246 bits (917),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 151/285 (53%), Positives = 215/285 (76%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCSGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG  G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAAHNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEIIIPLFRYFIQQA  212
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+PLF  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  213  ATTLQCPQREITQEHYECLLSYGWPGNIRELKAAAERFVLGLPPLGFSCHCEDERP-RLK  271
            A  L+ +  ++     + L +  WPGNIRELKAAA R VLG+P LG   + E++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  272  EMMRRIEKSLIHDCLLRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK+LI++ L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

22) hrpS in NC_017445


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  246 bits (920),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 150/285 (53%), Positives = 214/285 (76%), Gaps = 1/285 (0%)

Query  12   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  71
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG +G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  72   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  131
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  132  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  191
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+PLF  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  192  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  250
            A  L+ A  ++     + L +  WPGNIRELKAAA R VLG+P LG   +  ++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  251  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  295
              +R IEK +I++ L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

23) hrpS in NC_017390


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  246 bits (919),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 150/285 (53%), Positives = 214/285 (76%), Gaps = 1/285 (0%)

Query  33   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG +G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  212
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+PLF  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  271
            A  L+ A  ++     + L +  WPGNIRELKAAA R VLG+P LG   +  ++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  272  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I++ L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

24) hrpS in NC_012214


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  246 bits (919),  Expect = 8e-67, Method: Compositional matrix adjust.
 Identities = 150/285 (53%), Positives = 214/285 (76%), Gaps = 1/285 (0%)

Query  33   TLSEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCKGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG +G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTQF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPLFRSFIQKA  212
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+PLF  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLGLSCHCGQERP-QLK  271
            A  L+ A  ++     + L +  WPGNIRELKAAA R VLG+P LG   +  ++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  272  ELMRRIEKNVIHDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I++ L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

25) hrpS in NC_013971


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  240 bits (896),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 148/285 (52%), Positives = 213/285 (75%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG +G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKA  212
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+P+F  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHCGQERP-QLK  271
            A  L+ A  ++     + L +  WPGNIRELKAAA R VLG+P L+   +  ++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I + L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

26) hrpS in NC_013961


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  240 bits (896),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 148/285 (52%), Positives = 213/285 (75%), Gaps = 1/285 (0%)

Query  33   TLAEMIKTVAPLKIDLVLEGETGTGKDTLARKIHQLSGCRGKLVAVNCAAIPETLAESEL  92
             L+ +  +++ L ID++L GETGTGKDT AR+IH++SG +G++V++NCAAIPE+LAESEL
Sbjct  18   NLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESEL  77

Query  93   FGINNGAYTGAGQARAGYVEAADNGILFLDEIDSMPLSLQAKMLRVLENRGVERLGGTRF  152
            FG+ +GAYTGA+++R GY+EAA+ G L+LDEIDSMPL+LQAK+LRVLE R++ERLG+T  
Sbjct  78   FGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTST  137

Query  153  TPVNMRVIVATQTPLLTLVERGSFRRDLYFRLNTVSIQLQPLRARIEVIIPMFRSFIQKA  212
              +++ VI ++Q++L   VE G FRRDLYFRLN ++++L PLR + E I+P+F  F+  +
Sbjct  138  IHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS  197

Query  213  ASTLQCAPREITQEHYECLLSYSWPGNIRELKAAAERFVLGLPPLDLPCHCGQERP-QLK  271
            A  L+ A  ++     + L +  WPGNIRELKAAA R VLG+P L+   +  ++ +  LK
Sbjct  198  AKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLK  257

Query  272  ELMRRIEKNVIYDCLVRHGHSIDDAAQELGIPLRTLYHRIKLLNV  316
              +R IEK +I + L RH + ID A+ EL+IP RTLY+RIK L++
Sbjct  258  FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

27) H045_00470 in NC_020209


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  217 bits (806),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 138/240 (58%), Positives = 191/240 (80%), Gaps = 0/240 (0%)

Query  1    MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLR  60
            MNCAAIPESLAES+LFGV SGA+TGA +SR G++EAA+ GTLYLDEIDSMPL+LQAKLLR
Sbjct  63   MNCAAIPESLAESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLR  122

Query  61   VLESRGVERLGSTRFIPVDMRVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQ  120
            VLE+R++ERLGST  I +D+ VIASAQ SL+  VE+G FRRDL+FRLNV+T++LP+LRDQ
Sbjct  123  VLETRALERLGSTSTIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQ  182

Query  121  RERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWLGNIRELRSTAKRFVlglppl  180
             ERI+PLF + V   A  ++ + P   + L Q L  + W GNIREL+++AKR VLG+P L
Sbjct  183  PERILPLFTRFVAASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

Query  181  spplsKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI  240
            ++     +    +LK +L+ IEKALI+++++R+  C+D  ++E++I++RTLY+R+K+L+I
Sbjct  243  GADSQTEEHMACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

28) dctD in NC_011983


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  182 bits (674),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 115/281 (41%), Positives = 185/281 (66%), Gaps = 4/281 (1%)

Query  20   IADTDVDVLVTGETGSGKEVVASLLHRWSRRAKGNFVALNCGALPETVIESELFGHEPGA  79
            I++ ++DVL++GETG+GK+  A  +H  S R +G FV++NC+A+PE++ ESELFG  +GA
Sbjct  26   ISQLGIDVLLSGETGTGKDTTARRIHNMSGR-QGRFVPMNCAAIPESLAESELFGVVSGA  84

Query  80   FTGAQKKRIGRIEHASAGTLFLDEIESMPPAVQVQLLRVLEMREVTPLGTNEVRPVDLRV  139
            +TGA++ R+G IE A +GTL+LDEI+SMP A+Q +LLRVLE R +  LG+     +D+ V
Sbjct  85   YTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICV  144

Query  140  VAAAKVDLGDPRQRGDFREDLYYRLNVVTISIPPLRDRRDDIPLLFGYFAERAASRFKRD  199
            +A+A+  L+D+ + G FR DLY+RLNV+T+ +PPLRD+ + I  LF  F   +A  ++  
Sbjct  145  IASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVA  204

Query  200  VPTMSTAIRRHLQHHDWPGNVRELSHFAERFVLGLESAAGSKPGETPSTDTVLPLPARVE  259
            +P +   +++ L  H WPGN+REL   A R VLG+   ++    E   +   L +  R  
Sbjct  205  IPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMA-CGLKFQLRA-  262

Query  260  RYEADLIRETLAQNGGDVRRTIEALGIPRKTFYDKLQRHGI  300
              E  LI+++L ++   +  +   L+IPR+T+Y +++  +I
Sbjct  263  -IEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

29) DHBDCA_p1762 in NC_018866


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 119/290 (42%), Positives = 190/290 (66%), Gaps = 13/290 (4%)

Query  40   NISKSTYNVLLNGESGTGKEIFAQAIHHDYCPEGPFVALNCASIPRNLIESELFGYEGGA  99
            +IS+   +VLL+GE+GTGK+  A+ IH+    +G FV++NCA+IP +L ESELFG  +GA
Sbjct  25   SISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGA  84

Query  100  FTGANKNGQPGKIEAANGGTLFLDEIGDMPLEVQPVLLRVLEDKRVVRINSSKYTTVNFR  159
            +TGA++ ++ G IEAA+GGTL+LDEI+ MPL +Q+ LLRVLE + + R+ S+    +++ 
Sbjct  85   YTGADR-SRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  160  LIAATNQNLFQMVQEKTFRSDLYFRLSVLAIDIPPLRDRGKDILLLAHYFLDQISKEIQC  219
            +IA+++ +L + V+E  FR DLYFRL+VL++ +PPLRD+   IL L   F+   +KE++ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  220  EPPKLSFEVYKALVEYTWPGNIRQLKNAMVYAVFKAKNGILNIGDLPNEIKHRQTTVSVT  279
              P +   + + L    WPGNIR+LK A       AK  +L +  L  + +  +      
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAA-------AKRHVLGFPLLGADSQTEEHMACGL  256

Query  280  QNNDPLPLRDIQKEAIMHALCKNKN-KDEAARELGLSKSTLYRKIKEYGL  328
            +    + LR I+K  I +AL +++N  D A+ EL++++ TLYR+IKE ++
Sbjct  257  K----FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

30) DCF50_p1771 in NC_018867


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  173 bits (639),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 119/290 (42%), Positives = 190/290 (66%), Gaps = 13/290 (4%)

Query  40   NISKSTYNVLLNGESGTGKEIFAQAIHHDYCPEGPFVALNCASIPRNLIESELFGYEGGA  99
            +IS+   +VLL+GE+GTGK+  A+ IH+    +G FV++NCA+IP +L ESELFG  +GA
Sbjct  25   SISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGA  84

Query  100  FTGANKNGQPGKIEAANGGTLFLDEIGDMPLEVQPVLLRVLEDKRVVRINSSKYTTVNFR  159
            +TGA++ ++ G IEAA+GGTL+LDEI+ MPL +Q+ LLRVLE + + R+ S+    +++ 
Sbjct  85   YTGADR-SRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  160  LIAATNQNLFQMVQEKTFRSDLYFRLSVLAIDIPPLRDRGKDILLLAHYFLDQISKEIQC  219
            +IA+++ +L + V+E  FR DLYFRL+VL++ +PPLRD+   IL L   F+   +KE++ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  220  EPPKLSFEVYKALVEYTWPGNIRQLKNAMVYAVFKAKNGILNIGDLPNEIKHRQTTVSVT  279
              P +   + + L    WPGNIR+LK A       AK  +L +  L  + +  +      
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAA-------AKRHVLGFPLLGADSQTEEHMACGL  256

Query  280  QNNDPLPLRDIQKEAIMHALCKNKN-KDEAARELGLSKSTLYRKIKEYGL  328
            +    + LR I+K  I +AL +++N  D A+ EL++++ TLYR+IKE ++
Sbjct  257  K----FQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

31) atoC in NC_012962


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  164 bits (605),  Expect = 6e-42, Method: Compositional matrix adjust.
 Identities = 117/284 (42%), Positives = 179/284 (64%), Gaps = 21/284 (7%)

Query  45   VLITGESGTGKELIAKAIHYHSPRAKGPFIKINCGALPESLLESELFGHEKGAFTGAQIQ  104
            VL++GE+GTGK+  A+ IH  S R +G F+ +NC+A+PESL ESELFG   GA+TGA+  
Sbjct  33   VLLSGETGTGKDTTARRIHNMSGR-QGRFVPMNCAAIPESLAESELFGVVSGAYTGADRS  91

Query  105  RQGLFERANQGTLLLDEVGEMSLNLQAKLLRVLQEKEFERLGGNQTIKTDIRLIAATNRN  164
            R G +E A+ GTL LDE++ M+L LQAKLLRVL+ + +ERLG+  TI  DI +IA+++ +
Sbjct  92   RMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASAQAS  151

Query  165  LATMVERAEFRQDLFYRLNVIHLSPPPLRERPEDIALLAQHFLQKFSAENNKEIIELDAS  224
            L   VE + FR+DL++RLNV+ L  PPLR++PE I  L  +F+   + E N  I ++ + 
Sbjct  152  LDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDVCPL  211

Query  225  TLPILAAYHWPGNVRELSNALERAVIMSTGSVIFPDDLPEHLLFKPPLPLSSEHQQTLER  284
               +L++ +WPGN+REL  A  R V+       FP              L+++ Q   + 
Sbjct  212  LQQVLTGHRWPGNIRELKAAAKRHVL------GFP-------------LLGADSQTEEHM  252

Query  285  SHSLKESIKAYERKLISAALANNQGNRSQTARMLGISRRALMYK  328
            + +LK  ++A E+ LI  AL  ++     ++  L+I+RR+L Y+
Sbjct  253  ACGLKFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTL-YR  295

32) L483_30985 in NC_021491


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 101/230 (44%), Positives = 147/230 (64%), Gaps = 8/230 (3%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSARLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALLVNDGAEIQPED  268
            ++P V    QQVL +H WPGN REL      +V+ F+LL   GA+ Q E+
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL---GADSQTEE  250

33) PSPPH_0312 in NC_005773


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  156 bits (576),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 92/224 (42%), Positives = 149/224 (67%), Gaps = 5/224 (2%)

Query  44   EQLAPRSLPVLIRGESGTGKELLARHIHRGSDRSGLFVSVNCGAISPTYADAELFGYAAG  103
            E ++  ++ VL+ GE+GTGK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  AHSGSVSSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVR  163
            A +G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAAGKFHERLYHYLSEGRLDLPALREQPGNILPLAEYFVGIYSQRLSL  223
            ++A++   L +AV  GKF+  LY  L+   L LP+LR+QP  ILPL   FV+  ++ L++
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVQLISEDAQRTLEAHSWPGNTRELE-----NVIHFALLVSSGD  262
            ++  +    Q+ L +H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

34) PSPTO_5217 in NC_004578


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  156 bits (575),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 94/227 (42%), Positives = 150/227 (67%), Gaps = 8/227 (3%)

Query  41   EEMEQLAPRELPVLIRGESGTGKELLARHIHRGSDRSGLFVSVNCGAISPTYADAELFGY  100
            E + QL+   + VL+ GE+GTGK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG 
Sbjct  24   ESISQLG---IDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGV  80

Query  101  AAGAHSGSVSSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPV  160
             +GA +G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +
Sbjct  81   VSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHL  140

Query  161  DVRLVAATSIDLAQAVAAGKFHERLYHYLSEGKLDLPALREQPGNILPLAEYFVGIYSQR  220
            D+ ++A++   L +AV  GKF+  LY  L+   L LP+LR+QP  ILPL   FV+  ++ 
Sbjct  141  DICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKE  200

Query  221  LSLPVQLISEDAQRTLEAHSWPGNTRELE-----NVIHFALLVSSGD  262
            L++++  +    Q+ L +H WPGN REL      +V+ F+LL + ++
Sbjct  201  LNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

35) Psyr_0327 in NC_007005


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 93/224 (42%), Positives = 149/224 (67%), Gaps = 5/224 (2%)

Query  44   EQLAPRSLPVLIRGESGTGKELLARHIHRGSDRSGLFVSVNCGAISPTYADAELFGYAAG  103
            E ++  ++ VL+ GE+GTGK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  AHSGTVSSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAQQPSPVDVR  163
            A +G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAAGKFHERLYHYLSEGRLDLPALREQPGNILPLAEYFVGIYSQRLNL  223
            ++A++   L +AV  GKF+  LY  L+   L LP+LR+QP  ILPL   FV+  ++ LN+
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVQLISEEAQRTLEAHSWPGNTRELE-----NVIHFALLVSSGD  262
            ++  +    Q+ L +H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

36) TOPB45_0054 in NC_015682


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  156 bits (577),  Expect = 9e-40, Method: Compositional matrix adjust.
 Identities = 101/245 (42%), Positives = 158/245 (65%), Gaps = 8/245 (3%)

Query  17   LAKKVAPSSSTVLILGESGTGKEVLAKYIHFCSKRKGPFVPINCAAIPEDLLEAELFGYE  76
            +A  ++  +  VL+ GE+GTGK+  A+ IH  S R+G FVP+NCAAIPE L E+ELFG  
Sbjct  22   VAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVV  81

Query  77   KGAFTGAIKSKPGKFELANQGTIFLDEIGDLSPKLQAKLLRVIQEKQVERLGGDRAIKIE  136
             GA+TGA +S+ G +E A+ GT++LDEI+ ++  LQAKLLRV++ + +ERLG+  +I ++
Sbjct  82   SGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLD  141

Query  137  VRILAATNKDLEKEVKEGKFKEDLFFRLNVIPIRLPPLRERKEDI-PLLVNFFLKRLCER  195
            + ++A+++  L+  V EGKF+ DL+FRLNV+ ++LPPLR++ E I PL+  F       +
Sbjct  142  ICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAAS--AK  199

Query  196  E-GIEEKTITPEALETLMNYHWPGNIRELENLIERLVILSENNVIGVEDLSMSSL--DLK  252
            E  +    + P   + L   +WPGNIREL     R V+     ++G +  +   +  +LK
Sbjct  200  ELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVL--GFPLLGADSQTEEHMACGLK  257

Query  253  FAVRD  257
            F +R 
Sbjct  258  FQLRA  262

37) PP4_52350 in NC_021505


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  155 bits (573),  Expect = 1e-39, Method: Compositional matrix adjust.
 Identities = 99/224 (45%), Positives = 144/224 (65%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALLVNDSE  262
            ++P V    QQVL +H WPGN REL      +V+ F+LL  DS+
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

38) PputGB1_5223 in NC_010322


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  155 bits (572),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 98/223 (44%), Positives = 143/223 (65%), Gaps = 5/223 (2%)

Query  44   ERLAPQPVPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQQVLEAHFWPGNTRELE-----NVIHFALLVNDG  261
            ++P V    QQVL +H WPGN REL      +V+ F+LL  D+
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADS  246

39) Nhal_2343 in NC_013960


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  155 bits (570),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 119/276 (44%), Positives = 178/276 (65%), Gaps = 14/276 (5%)

Query  48   VLISGESGTGKEVLAHYIHR-HSRCCEGPFVAINCAAIPENMLEATLFGYEKGAFTGAHQ  106
            VL+SGE+GTGK+  A+ IH   +R  +G FV++NCAAIPE++ E+ LFG   GA+TGA++
Sbjct  33   VLLSGETGTGKDTTARRIHNMSGR--QGRFVPMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  107  TRPGKFEQAQGGTLLLDEISEMDLDLQAKLLRVLQEREVERLGGCKVIPLDVRILATTNQ  166
            +R G +E AQGGTL LDEI  M L LQAKLLRVL+ R +ERLG+   I LD+ ++A+++ 
Sbjct  91   SRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASAQA  150

Query  167  DLREQIGNGQFREDLYYRLNVFPLQLPPLRERTQDIlplarrltasraaaVGRLPPRLTL  226
             L + + +G+FR DLY+RLNV+ L+LPPLR++ + ILPL  R+ A+ A  +    P +  
Sbjct  151  SLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDVCP  210

Query  227  AAETKLLAHPWPGNIRELDNVIQRALILEEGEAITAQALAFEAGMEAPLPRGVGELSKDL  286
              +  L +H WPGNIREL    +R       + +    L+ ++  E  ++ G   L  +L
Sbjct  211  LLQQVLTGHRWPGNIRELKAAAKR-------HVLGFPLLGADSQTEEHMACG---LKFQL  260

Query  287  KSHEKQLILDTLARCGGRRKQAAAQLGISERTLRYK  322
            ++ EK LI ++L R       A+ +L+I+ RTL Y+
Sbjct  261  RAIEKALIQQALKRHRNCIDAASLELDIPRRTL-YR  295

40) B479_25340 in NC_019905


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  154 bits (567),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 97/224 (44%), Positives = 144/224 (65%), Gaps = 5/224 (2%)

Query  44   EHLAPQSLPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++  ++ VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SQGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQQALEAHPWPGNTRELE-----NVIHFALLLNDGE  262
            ++P V    QQ L +H WPGN REL      +V+ F+LL  D++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

41) PADK2_04665 in NC_018080


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/237 (44%), Positives = 156/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   FV+  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRILESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q++L +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

42) PLES_10441 in NC_011770


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/237 (44%), Positives = 156/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   F++  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

43) PAM18_1008 in NC_017548


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 104/237 (44%), Positives = 156/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   FV+  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPTIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

44) NCGM2_5127 in NC_017549


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/237 (44%), Positives = 157/237 (67%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   F++  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

45) PA3932 in NC_002516


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (563),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 102/237 (44%), Positives = 156/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  THNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            +  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   F++  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

46) PA14_13000 in NC_008463


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (564),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 103/237 (44%), Positives = 157/237 (67%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFIGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   F++  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

47) MDS_4670 in NC_015410


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (565),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 101/232 (44%), Positives = 151/232 (66%), Gaps = 7/232 (3%)

Query  42   AEALADNGLPLLILGETGTGKELLARYIHRQSERAGLFVAVSCAAISPQWGEAELFGHLG  101
            AE++++ G+ +L+ GETGTGK+  AR IH  S R G FV+++CAAI+   +E+ELFG ++
Sbjct  23   AESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVS  82

Query  102  GAHVGAASSRAGWFGSANGGTLYLDEIADLSRTLQSKLLAALETREVYRVGASQALPVDV  161
            GA  GA  SR G + +A+GGTLYLDEI  ++ +LQ+KLL  LETR + R+G++ ++ +D+
Sbjct  83   GAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDI  142

Query  162  RLVAASSIDLARAVAAGTFDERLYAYLCDGQLRFPALRERVGDILPLAEYFLGIHASRLD  221
             ++A++   L  AV  G F   LY  L    L++P+LR++   ILPL   F++  A  L+
Sbjct  143  CVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELN  202

Query  222  LAIPPISPAAQAVLESHRWPGNTRELE-----NVIHFALLLAGNAEIGPEHL  268
            +AIP + P  Q VL +HRWPGN REL      +V+ F+LL  G      EH+
Sbjct  203  VAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL--GADSQTEEHM  252

48) PPS_5018 in NC_015733


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (566),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 98/224 (44%), Positives = 143/224 (64%), Gaps = 5/224 (2%)

Query  44   EHLAPQPLPVLIRGETGTGKELLARQIHRASDRSGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SQGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGTLELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   TL LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQQALEAHPWPGNTRELE-----NVIHFALLLNDGE  262
            ++P V    QQ L +H WPGN REL      +V+ F+LL  D++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

49) PPUBIRD1_4959 in NC_017530


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 97/224 (44%), Positives = 142/224 (64%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   F +  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQRVLEGHFWPGNTRELE-----NVIHFALLVNDGE  262
            ++P V    Q+VL GH WPGN REL      +V+ F+LL  D++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

50) PP_5166 in NC_002947


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (565),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 97/224 (44%), Positives = 142/224 (64%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFAGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   F +  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQRVLEGHFWPGNTRELE-----NVIHFALLVNDGE  262
            ++P V    Q+VL GH WPGN REL      +V+ F+LL  D++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

51) M062_20795 in NC_021577


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  153 bits (565),  Expect = 8e-39, Method: Compositional matrix adjust.
 Identities = 104/237 (44%), Positives = 156/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   FV+  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

52) PputW619_0299 in NC_010501


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 96/224 (43%), Positives = 143/224 (64%), Gaps = 5/224 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVKAGRFNERLYQYLHEGALELPPLRERCGDILPLAEYFVGIYCARLQR  223
            ++A++   L   V  G+F   LY  L+  +L LPPLR++   ILPL   FV+     L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLISEAAQQVLEAHTWPGNTRELE-----NIIHFALLVNDSE  262
            ++P +    QQVL +H WPGN REL      +++ F+LL  DS+
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

53) G655_05020 in NC_020912


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  152 bits (561),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 103/237 (44%), Positives = 157/237 (67%), Gaps = 11/237 (4%)

Query  42   ERLAPQGQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSRNHAEAELFGYAPG  101
            E ++  G  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIGDLPLTLQARLLQTLEEREVLRVGAQQPIPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI+ +PL+LQA+LL+ LE R + R+G+   I  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLDQAVRAGKFLAGLQQY--LHDGRLSLPPLRERPGDILPLAEYFMGVYAQRL  219
            +++++   LD+AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   F++  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  DLPVPAIGVETQRVLESYPWPGNIRELE-----NVVHFALLVSD--KEEILPQHLNF  269
            ++++P +    Q+VL +  WPGNIREL      +V+ F+LL +D   EE ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

54) flbD in NC_018220


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 96/219 (44%), Positives = 140/219 (64%), Gaps = 5/219 (2%)

Query  44   ERLAPQPLPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAG  103
            E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  THGGTASSRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVR  163
            +  G+  SR G + +A GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQR  223
            ++A++   L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ 
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLVSEAAQRVLEAHFWPGNTRELE-----NVIHFALL  257
            ++P V    Q+VL +H WPGN REL      +V+ F+LL
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

55) AvCA6_31690 in NC_021150


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 96/219 (44%), Positives = 145/219 (67%), Gaps = 5/219 (2%)

Query  44   ERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAG  103
            E ++  G+ VL+ GE+GTGK+  AR+IH  SGR G FV++NC+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  AYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVR  163
            AY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGL  223
            ++A++   L +AV  GKF   L   L+   L LP+LR++P  ILPL   F++  A+ L +
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PLPQLGTAAQFALERYSWPGNTRELES-----VIHFALL  257
            ++P++    Q  L    WPGN REL +     V+ F+LL
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

56) AvCA_31690 in NC_021149


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 96/219 (44%), Positives = 145/219 (67%), Gaps = 5/219 (2%)

Query  44   ERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAG  103
            E ++  G+ VL+ GE+GTGK+  AR+IH  SGR G FV++NC+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  AYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVR  163
            AY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGL  223
            ++A++   L +AV  GKF   L   L+   L LP+LR++P  ILPL   F++  A+ L +
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PLPQLGTAAQFALERYSWPGNTRELES-----VIHFALL  257
            ++P++    Q  L    WPGN REL +     V+ F+LL
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

57) Avin_31690 in NC_012560


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 96/219 (44%), Positives = 145/219 (67%), Gaps = 5/219 (2%)

Query  44   ERLAPTGLPVLIRGESGTGKELLARQIHRESGRGGLFVAVNCGALSPTWAEAELFGHAAG  103
            E ++  G+ VL+ GE+GTGK+  AR+IH  SGR G FV++NC+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  AYAGSACSRAGWFGSANGGTLYLDEIGDLPLGLQGKLLAALETREVLRVGTQQPTPVDVR  163
            AY+G+  SR G + +A+GGTLYLDEI+ +PL+LQ+KLL  LETR + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAASSVDLAQAVAAGKFNERLHRYLDEGRLELPALRERPGDILPLAEYFLGVYAQRLGL  223
            ++A++   L +AV  GKF   L   L+   L LP+LR++P  ILPL   F++  A+ L +
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PLPQLGTAAQFALERYSWPGNTRELES-----VIHFALL  257
            ++P++    Q  L    WPGN REL +     V+ F+LL
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

58) H045_22055 in NC_020209


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  151 bits (556),  Expect = 4e-38, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 149/224 (67%), Gaps = 5/224 (2%)

Query  44   ESLAPRALPVLIRGETGSGKELLARHIHRGSDRSGLFVSVNCGAISPTYADAELFGYAAG  103
            ES++  ++ VL+ GETG+GK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  SHSGAVSSRAGWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAQQPSPVDVR  163
            + +GA  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAAGKFNERLFHYLSEGKLELPALRERVGDILSLAEYFLGIYSQRLEL  223
            ++A++   L +AV  GKF   L+  L+   L LP+LR++   IL+L   F++  ++ L++
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLISEAAQRVLEQHSWPGNTRELE-----NVIHFALLVSSGD  262
            ++P +    Q+VL  H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

59) YSA_04462 in NC_017986


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  150 bits (552),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 137/212 (65%), Gaps = 5/212 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGTHGGTAS  110
            + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G+  G+  
Sbjct  31   IDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + +A GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ ++A++  
Sbjct  91   SRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASAQA  150

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPLPLVSE  230
             L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ ++P V  
Sbjct  151  SLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDVCP  210

Query  231  AAQRVLEAHFWPGNTRELE-----NVIHFALL  257
              Q+VL +H WPGN REL      +V+ F+LL
Sbjct  211  LLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

60) Pput_5073 in NC_009512


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  150 bits (552),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 95/212 (45%), Positives = 137/212 (65%), Gaps = 5/212 (2%)

Query  51   LPVLIRGETGTGKELLARQIHRTSDRGGLFVSVNCAAISPTYADAELFGYSAGTHGGTAS  110
            + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + A++ELFG  +G+  G+  
Sbjct  31   IDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSGAYTGADR  90

Query  111  SRAGWFGSASGGTLYLDEIADLPLAIQGKLLAALENREVTRVGAQQPQPVDVRLVAATSI  170
            SR G + +A GGTLYLDEI  +PLA+Q+KLL  LE R + R+G+     +D+ ++A++  
Sbjct  91   SRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICVIASAQA  150

Query  171  DLARVVRAGRFNERLYQYLREGALELPPLRERPGDILPLAEYFVGIYSVRLQRPLPLVSE  230
             L   V  G+F   LY  L   +L LPPLR++P  ILPL   FV+  +  L+ ++P V  
Sbjct  151  SLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNVAIPDVCP  210

Query  231  AAQRVLEAHFWPGNTRELE-----NVIHFALL  257
              Q+VL +H WPGN REL      +V+ F+LL
Sbjct  211  LLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL  242

61) PSPA7_1175 in NC_009656


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  148 bits (544),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 101/237 (43%), Positives = 155/237 (66%), Gaps = 11/237 (4%)

Query  42   ERLAPQSQPVLIEGETGTGKELLARQIHRHSERAGLFVAVSCSALSSNHAEAELFGYAPG  101
            E ++  +  VL+ GETGTGK+  AR+IH  S R G FV+++C+A++ + AE+ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  102  AHNGPVGSRAGWFGSANGGTLYLDEIADLPLALQAKLLQTLEEREVLRVGAQQPLPHDVR  161
            A  G+  SR G + +A+GGTLYLDEI  +PLALQAKLL+ LE R + R+G+   +  D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  162  LVTATSVDLNQAVRAGKFLEGLRQY--LHDGRLSLPPLRERPGDILPLAEYFVGVYAQRL  219
            +++++   L++AV  GKF  +L  Y  L+   L LPPLR++P  ILPL   FV+  A+ L
Sbjct  144  VIASAQASLDDAVEEGKFRRDL--YFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKEL  201

Query  220  ELPVPVIGVETQEVLERYPWPGNIRELE-----NVVHFALLVSGR--DEILPQHLNF  269
            ++++P +    Q+VL    WPGNIREL      +V+ F+LL ++   +E ++  L+F
Sbjct  202  NVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQTEEHMACGLKF  258

62) GAU_2190 in NC_012489


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  145 bits (534),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 96/214 (45%), Positives = 145/214 (68%), Gaps = 3/214 (1%)

Query  13   IASTDAGALITGESGTGKEVAARTIHELSTRASQPFVAINAAAIPEGLMESEIFGHERGA  72
            I+  + + L++GE+GTGK+ +AR IH++S R ++ FV++N AAIPE+L ESE+FG   GA
Sbjct  26   ISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGR-FVPMNCAAIPESLAESELFGVVSGA  84

Query  73   FTGAVSSRAGCFEQADRGTLLLDELAEMPIALQPKLLRVLEDGRVRRLGSAREAAFDVRV  132
            +TGA  SR G +E A+ GTL LDE+  MP+ALQ+KLLRVLE   + RLGS+    +D+ V
Sbjct  85   YTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDICV  144

Query  133  IAATNRDPMTAVDEGKLRADLMYRLNVFSIVLPALRERTEDI-PLLARHFIHLFNHKHGA  191
            IA+++     AV+EGK+R DL +RLNV+++ LP+LR++ E I PL++R F+         
Sbjct  145  IASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTR-FVAASAKELNV  203

Query  192  EVHAMRETTMDRLQAWHWPGNVRELRNVIERSVV  225
             +  +     + L + +WPGN+REL+    R V+
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVL  237

63) PCA10_01930 in NC_021499


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  143 bits (525),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 101/227 (45%), Positives = 152/227 (67%), Gaps = 8/227 (3%)

Query  40   EEVDQLAPGDLPVLIQGETGTGKELLARQIHRSSDRPGLFVAVSCSAISKSYAEAELFGH  99
            E + QL+   + VL+ GETGTGK+  AR+IH  S+R G FV+++C+AI+ S AE+ELFG 
Sbjct  24   ESISQLG---IDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGV  80

Query  100  TPGAYNGAASSRAGWFGSANGGTLYLDEIGDlplplqakllaalESREVTRVGAQQPTPV  159
             +GAY GA  SR G + +A+GGTLYLDEI+ +PL+LQAKLL  LE+R + R+G+     +
Sbjct  81   VSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHL  140

Query  160  DVRLVAATSIDLAEAVRVGKFNARLYQYLNEGRVELPPLRERPDDILPLAEYFLGIYAQR  219
            D+ ++A++   L +AV  GKF   LY  LN   + LPPLR++P+ ILPL   F++  A+ 
Sbjct  141  DICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKE  200

Query  220  LDLPLPLISAAAQAVLEAYPWPGNTRELENSVH-----FALLVSEGD  261
            L++++P + +  Q VL +  WPGN REL  +       F+LL ++++
Sbjct  201  LNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

64) PSEEN5263 in NC_008027


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  143 bits (526),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 100/235 (43%), Positives = 150/235 (64%), Gaps = 5/235 (2%)

Query  33   DERSQALRRALERLAPQPLPVLIRGETGTGKELLARQIHRASDRGGLFVSVNCAAISPTY  92
             ER   L    E ++   + VL+ GETGTGK+  AR+IH  S+R G FV++NCAAI+ + 
Sbjct  13   AERVPNLGIVAESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESL  72

Query  93   ADAELFGYSAGTQGGTASSRAGWFGSANGGTLYLDEIADLPLAIQGKLLAALENREVTRV  152
            A++ELFG  +G+  G+  SR G + +A+GGTLYLDEI  +PLA+Q+KLL  LE R + R+
Sbjct  73   AESELFGVVSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERL  132

Query  153  GATQAQAVDVRLVAASSIDLAQAVRAGRFNerlyhylhegelelPALRDRVGDILPLAEY  212
            G+T +  +D+ ++A++   L +AV  G+F   LY  L+   L LP+LRD+   ILPL   
Sbjct  133  GSTSTIHLDICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTR  192

Query  213  FVGIYSVRLDRSVPLISEAAQQALEAHAWPGNTRELE-----NVIHFALLVSDGD  262
            FV+  +  L+ ++P +    QQ L +H WPGN REL      +V+ F+LL +D++
Sbjct  193  FVAASAKELNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

65) SCE1572_16595 in NC_021658


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  141 bits (520),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 120/286 (42%), Positives = 183/286 (64%), Gaps = 7/286 (2%)

Query  24   ETVAPTPLPVLILGETGTGKEVVAEWIAGMSRHPRERFVKVNCAslseslveselFGHER  83
            E+++   + VL+ GETGTGK+  A +I  MS + + RFV +NCA+++ESL ESELFG   
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGR-QGRFVPMNCAAIPESLAESELFGVVS  82

Query  84   GAFTGAVAPREGLFEAAHEGTLFLDEVGELSPRTQAKLLRTLEYGEIVRVGSTRPRRVDV  143
            GA+TGA  +R G +EAA+ GTL+LDE++ ++   QAKLLR LE   + R+GST   ++D+
Sbjct  83   GAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDI  142

Query  144  RVIAATHRDLEQMVRDGDFRQDLYFRLNAVTLRIPPLRARTTEVlplaelfaarlarrlg  203
             VIA+++  L++ V +G FR+DLYFRLN +TL++PPLR +   +LPL   F A  A+ L 
Sbjct  143  CVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELN  202

Query  204  rpaprlapeaTAALLAHTWPGNIRELRHVIDRAVVMSKGGPIVADHLMLEAPREKADAGI  263
             + P + P     L +H WPGNIREL+    R V+   G P+++ +       E    G+
Sbjct  203  VAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVL---GFPLLGAD---SQTEEHMACGL  256

Query  264  KGDLRTFERDRIVAALDRTRQNQTRAAELLGVSRRTLTNKLNAYGI  309
            K +LR++E+  I  AL R R+    A+  L+++RRTL  +++  +I
Sbjct  257  KFQLRAIEKALIQQALKRHRNCIDAASLELDIPRRTLYRRIKELSI  302

66) Pfl01_0222 in NC_007492


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  139 bits (510),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 95/227 (42%), Positives = 151/227 (67%), Gaps = 8/227 (3%)

Query  40   EEMAQLAPRSISVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFgy  99
            E ++QL+   I VL+ GETGTGK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG 
Sbjct  24   ESISQLG---IDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGV  80

Query  100  aagsysgsassragWFGSANGGTLYLDEIGDLPLPIQIKLLSALENHEVTRVGAHQPSPV  159
             +G+Y+G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +
Sbjct  81   VSGAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHL  140

Query  160  DVRLVAATSIDLAQAVAAGKFHERLYHYLSEGHLELPALRARVGDILSLAEYFLGIYSQR  219
            D+ ++A++   L +AV  GKF+  LY  L+   L LP+LR +   IL+L   F++  ++ 
Sbjct  141  DICVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKE  200

Query  220  LDLPVPLISEAAQQVLEQHSWPGNTRELE-----NVIHFALLVSTGD  261
            L++++P +    QQVL  H WPGN REL      +V+ F+LL + ++
Sbjct  201  LNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

67) PFLU0214 in NC_012660


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  136 bits (499),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 150/224 (67%), Gaps = 5/224 (2%)

Query  44   ESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLFVSVNCGAISPTYADAELFGYaag  103
            ES++  ++ VL+ GETG+GK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  ahsgaassragWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVR  163
            A +GA  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAAGKFHERLFHYLSEGQLDLPALRERVGDILSLAEYFLGIYSQRLDL  223
            ++A++   L +AV  GKF+  L+  L+   L LP+LR++   IL+L   F++  ++ L++
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLISDAAQRVLEHHTWPGNTRELE-----NVIHFALLVSSGD  262
            ++P +    Q+VL  H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

68) PflA506_0225 in NC_017911


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  134 bits (493),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 150/224 (67%), Gaps = 5/224 (2%)

Query  44   ESLAPRALPVLIRGETGSGKELLARHIHRGSDRTGLFVSVNCGAISPTYADAELFgyaag  103
            ES++  ++ VL+ GETG+GK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  shsgaassragWFGSANGGTLYLDEIGDLPLPIQVKLLAALENHEVTRVGAHQPSPVDVR  163
            + +GA  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAVGKFHERLFHYLSEGRLDLPALRERVGDILSLAEYFLGIYSQRLDL  223
            ++A++   L +AV  GKF+  L+  L+   L LP+LR++   IL+L   F++  ++ L++
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  PVPLISDAAQQVLEHHTWPGNTRELE-----NVIHFALLVSSGD  262
            ++P +    QQVL  H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

69) PSEBR_a233 in NC_015379


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  132 bits (486),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 90/224 (41%), Positives = 147/224 (66%), Gaps = 5/224 (2%)

Query  44   EQLAPRAISVLIRGETGSGKELLARHIHRESDRGGLFVSVNCGAISPTYADAELFgyaag  103
            E ++  +I VL+ GETG+GK+  AR+IH  S+R G FV++NC+AI+ + A++ELFG  +G
Sbjct  24   ESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVSG  83

Query  104  sysgsassragWFGSANGGTLYLDEIGDLPLPIQIKLLAALENHEVTRVGAHQPSPVDVR  163
            +Y+G+  SR G + +A+GGTLYLDEI+ +PL++Q KLL  LE + + R+G+     +D+ 
Sbjct  84   AYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDIC  143

Query  164  LVAATSIDLAQAVAAGKFHERLYHYLSEGRLELPALRERVGDILSLAEYFLGIYSQRLGL  223
            ++A++   L +AV  GKF+  LY  L+   L LP+LR++   IL+L   F++  ++ L +
Sbjct  144  VIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAKELNV  203

Query  224  TVPLISEAAQLALEQHSWPGNTRELE-----NVIHFALLVSTGD  262
            ++P +    Q  L  H WPGN REL      +V+ F+LL + ++
Sbjct  204  AIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLLGADSQ  247

70) Pmen_4342 in NC_009439


> U03852|1|G1|437292|AAA17650.1|Pseudomonas_syringae_pv._syringae_Pss61|+|18..926|hrpS|-|positive 
regulatory factor
Length=302

 Score =  124 bits (452),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 101/234 (44%), Positives = 145/234 (62%), Gaps = 9/234 (3%)

Query  42   AEVLAGNGQPLLILGETGTGKELLARYIHRQSERGGLFVALSCAAISPQWGEAELFghvg  101
            AE ++  G  +L+ GETGTGK+  AR IH  S R G FV+++CAAI+   +E+ELFG V+
Sbjct  23   AESISQLGIDVLLSGETGTGKDTTARRIHNMSGRQGRFVPMNCAAIPESLAESELFGVVS  82

Query  102  gahvgaassragWFGSANGGTLYLDEIADLSRPLQSKLLAALETREVYRVGASQALPADV  161
            GA  GA  SR G + +A+GGTLYLDEI  ++ +LQ+KLL  LETR + R+G++ ++  D+
Sbjct  83   GAYTGADRSRMGYIEAAQGGTLYLDEIDSMPLALQAKLLRVLETRALERLGSTSTIHLDI  142

Query  162  RLVAASSIDLARAVAAGTFDERLYAYLCDGQLLFPALRQRVGDILPLAEYFLGIHASRLG  221
             ++A++   L  AV  G F   LY  L    L +P+LR++   ILPL   F++  A    
Sbjct  143  CVIASAQASLDDAVEEGKFRRDLYFRLNVLTLKLPPLRDQPERILPLFTRFVAASAK--E  200

Query  222  LGLAVPPISPAAQAVLEAHRWPGNTRELE-----NVIHFALLLAGNAEIGPEHL  270
            L +A+P + P  Q VL +HRWPGN REL      +V+ F+LL  G      EH+
Sbjct  201  LNVAIPDVCPLLQQVLTGHRWPGNIRELKAAAKRHVLGFPLL--GADSQTEEHM  252