Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
IS606 transposase |
NC_017368 (Helicobacter pylori F16) |
4e-37 |
100 |
|
IS606 transposase |
NC_020508 (Helicobacter pylori OK113) |
1e-33 |
90 |
|
transposase |
NC_017360 (Helicobacter pylori 35A) |
2e-33 |
89 |
|
IS606 transposase |
NC_017367 (Helicobacter pylori F57) |
1e-32 |
93 |
|
transposase |
NC_021215 (Helicobacter pylori UM032) |
5e-32 |
88 |
|
transposase |
NC_021882 (Helicobacter pylori UM298) |
5e-32 |
88 |
|
transposase |
NC_021216 (Helicobacter pylori UM299) |
5e-32 |
88 |
|
IS606 transposase |
NC_017926 (Helicobacter pylori XZ274) |
2e-30 |
92 |
|
IS606 transposase |
NC_017358 (Helicobacter pylori Cuz20) |
3e-29 |
82 |
|
IS606 transposase |
NC_017740 (Helicobacter pylori Shi169) |
3e-29 |
82 |
|
transposase |
NC_017375 (Helicobacter pylori 83) |
5e-29 |
84 |
|
IS606 transposase |
NC_017739 (Helicobacter pylori Shi417) |
2e-28 |
80 |
|
IS606 transposase |
NC_017365 (Helicobacter pylori F30) |
8e-27 |
91 |
|
transposase, IS605 OrfB |
NC_008781 (Polaromonas naphthalenivorans CJ2) |
7e-09 |
43 |
|
transposase IS605 OrfB |
NC_016023 (Bacillus coagulans 36D1) |
8e-08 |
43 |
|
transposase |
NC_018528 (Lactobacillus helveticus R0052) |
1e-07 |
45 |
|
transposase IS605 family |
NC_015416 (Methanosaeta concilii GP6) |
1e-06 |
44 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_017368_P1' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc