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PAthogenisity Island DataBase (PAI DB)

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Homologs of SAOV_0274 gene of NC_017337_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAOV_0274
( YP_005735791.1 )

putative prophage integrase

NC_017337
(Staphylococcus aureus ED133)

0.0

100

2) SAB0258c
( YP_415762.1 )

phage-related integrase

NC_007622
(Staphylococcus aureus RF122)

0.0

3) SAPIG0334
( YP_005733144.1 )

integrase

NC_017333
(Staphylococcus aureus ST398)

1e-177

4) C248_0310
( YP_006709071.1 )

phage integrase family protein

NC_018608
(Staphylococcus aureus 08BA02176)

1e-175

5) int
( YP_185210.1 )

prophage L54a, integrase

NC_002951
(Staphylococcus aureus COL)

3e-170

6) SaurJH1_0311
( YP_001315460.1 )

phage integrase family protein

NC_009632
(Staphylococcus aureus JH1)

3e-169

7) SaurJH9_0304
( YP_001245687.1 )

phage integrase family protein

NC_009487
(Staphylococcus aureus JH9)

3e-169

8) int
( YP_001331297.1 )

integrase

NC_009641
(Staphylococcus aureus Newman)

3e-169

9) SATW20_03260
( YP_005730346.1 )

phage integrase

NC_017331
(Staphylococcus aureus TW20)

3e-169

10) SAS0891
( YP_043018.1 )

phage integrase

NC_002953
(Staphylococcus aureus MSSA476)

1e-149

11) SaurJH1_1039
( YP_001316182.1 )

phage integrase family protein

NC_009632
(Staphylococcus aureus JH1)

8e-149

12) SaurJH9_1020
( YP_001246397.1 )

phage integrase family protein

NC_009487
(Staphylococcus aureus JH9)

8e-149

13) SABB_00412
( YP_008168652.1 )

putative phage integrase

NC_021670
(Staphylococcus aureus Bmb9393)

3e-124

14) CA347_1485
( YP_008128343.1 )

phage integrase family protein

NC_021554
(Staphylococcus aureus CA-347)

3e-124

15) SAUSA300_1438
( YP_494135.1 )

phiSLT ORF401-like protein, integrase

NC_007793
(Staphylococcus aureus FPR3757)

3e-124

16) SAEMRSA15_14090
( YP_006237753.1 )

phage integrase

NC_017763
(Staphylococcus aureus HO 5096 0412)

3e-124

17) SAA6159_01417
( YP_005739563.1 )

pathogenicity island protein, integrase

NC_017338
(Staphylococcus aureus JKD6159)

3e-124

18) M013TW_1502
( YP_005297931.1 )

phage integrase

NC_016928
(Staphylococcus aureus M013)

3e-124

19) BN843_14930
( YP_007868558.1 )

Phage integrase

NC_021059
(Staphylococcus aureus M1)

3e-124

20) SA957_1443
( YP_008585538.1 )

integrase

NC_022442
(Staphylococcus aureus SA957)

3e-124

21) USA300HOU_1490
( YP_001575377.1 )

integrase

NC_010079
(Staphylococcus aureus TCH1516)

3e-124

22) int2
( YP_005747735.1 )

prophage L54a integrase

NC_017342
(Staphylococcus aureus TCH60)

7e-124

23) SAOUHSC_01582
( YP_500097.1 )

bacteriophage integrase

NC_007795
(Staphylococcus aureus NCTC 8325)

9e-124

24) SAPIG1554
( YP_005734350.1 )

integrase

NC_017333
(Staphylococcus aureus ST398)

6e-120

25) SAAG_01400
( YP_008449411.1 )

integrase

NC_022113
(Staphylococcus aureus 55/2053)

7e-119

26) SAR1562
( YP_040964.1 )

phage integrase

NC_002952
(Staphylococcus aureus MRSA252)

7e-119

27) int
( NP_646259.1 )

integrase

NC_003923
(Staphylococcus aureus MW2)

7e-119

28) A284_11360
( YP_007386029.1 )

Integrase

NC_020164
(Staphylococcus warneri SG1)

2e-84

29) int
( YP_254496.1 )

integrase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

5e-80

30) int
( YP_008167977.1 )

Integrase

NC_021670
(Staphylococcus aureus Bmb9393)

6e-73

31) SARLGA251_07460
( YP_005754746.1 )

integrase

NC_017349
(Staphylococcus aureus LGA251)

2e-72

32) int3
( YP_005748445.1 )

prophage L54a integrase

NC_017342
(Staphylococcus aureus TCH60)

1e-71

33) SLGD_02010
( YP_003472225.1 )

pathogenicity island protein, integrase

NC_013893
(Staphylococcus lugdunensis HKU09-01)

7e-72

34) SAAG_01239
( YP_008448745.1 )

integrase

NC_022113
(Staphylococcus aureus 55/2053)

8e-72

35) SAT0131_00377
( YP_005751641.1 )

Integrase

NC_017347
(Staphylococcus aureus T0131)

3e-70

36) SAAV_0787
( YP_003281710.1 )

pathogenicity island protein, integrase

NC_013450
(Staphylococcus aureus ED98)

4e-70

37) SAA6008_00346
( YP_005743732.1 )

pathogenicity island protein, integrase

NC_017341
(Staphylococcus aureus JKD6008)

4e-65

38) SAR0366
( YP_039823.1 )

integrase

NC_002952
(Staphylococcus aureus MRSA252)

4e-65

39) int
( YP_005744209.1 )

pathogenicity island protein, integrase

NC_017341
(Staphylococcus aureus JKD6008)

2e-62

40) rbsU
( YP_005752134.1 )

Pathogenicity island protein, integrase

NC_017347
(Staphylococcus aureus T0131)

2e-62

41) SATW20_08890
( YP_005730901.1 )

integrase

NC_017331
(Staphylococcus aureus TW20)

2e-62

42) int
( YP_493499.1 )

integrase

NC_007793
(Staphylococcus aureus FPR3757)

3e-62

43) USA300HOU_0850
( YP_001574750.1 )

integrase

NC_010079
(Staphylococcus aureus TCH1516)

3e-62

44) SACOL0885
( YP_185756.1 )

pathogenicity island protein, integrase

NC_002951
(Staphylococcus aureus COL)

4e-62

45) M013TW_0806
( YP_005297248.1 )

Integrase, superantigen-encoding pathogenicityislands SaPI

NC_016928
(Staphylococcus aureus M013)

4e-62

46) SA40_0754
( YP_008587399.1 )

integrase

NC_022443
(Staphylococcus aureus SA40)

4e-62

47) SA957_0769
( YP_008584867.1 )

integrase

NC_022442
(Staphylococcus aureus SA957)

4e-62

• Sequence Alignments

1) SAOV_0274 in NC_017337


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  646 bits (2442),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/401 (100%), Positives = 401/401 (100%), Gaps = 0/401 (0%)

Query  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60
            MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

2) SAB0258c in NC_007622


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  637 bits (2407),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/401 (99%), Positives = 397/401 (99%), Gaps = 0/401 (0%)

Query  1    MWMEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVALNKNTKQAQKEAMFRLEEKIKEKLH  60
            MW+EKFKNKNNETSYRYYEKYKDPYTDKWKRVSV LNKNTKQAQKEAMFRLEEKIKEKLH
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKSSSILKTLTFHSLLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            DKSS+ LKTLTFHSLLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQGIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQ IQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

3) SAPIG0334 in NC_017333


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  615 bits (2325),  Expect = 1e-177, Method: Compositional matrix adjust.
 Identities = 385/401 (97%), Positives = 398/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEDKIKEKLN  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLE+KIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   NQSSSILKTLTFHTLLDEWFEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            ++SS+ LKTLTFH+LLDEW+EYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNIYSENQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSN+YS NQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSRRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGS+RKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

4) C248_0310 in NC_018608


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  609 bits (2301),  Expect = 1e-175, Method: Compositional matrix adjust.
 Identities = 392/401 (98%), Positives = 399/401 (99%), Gaps = 0/401 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

5) int in NC_002951


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  591 bits (2232),  Expect = 3e-170, Method: Compositional matrix adjust.
 Identities = 391/401 (98%), Positives = 399/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

6) SaurJH1_0311 in NC_009632


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  588 bits (2219),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 389/401 (98%), Positives = 397/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTI INGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGH DEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

7) SaurJH9_0304 in NC_009487


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  588 bits (2219),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 389/401 (98%), Positives = 397/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTI INGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGH DEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

8) int in NC_009641


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  588 bits (2219),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 389/401 (98%), Positives = 397/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTI INGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGH DEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

9) SATW20_03260 in NC_017331


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  588 bits (2219),  Expect = 3e-169, Method: Compositional matrix adjust.
 Identities = 389/401 (98%), Positives = 397/401 (99%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180
            YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240
            KEEAKMYNYLEMEQVIQIRDFILND+NMQYRARILVAGAVEVQALTGMRIGELLALQVKD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300
            VDLKNKTI INGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360
            WEP+YVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401
            SLKAIMKRVGH DEKTTIKVYTHVTEKMDRELEQKLEKLVY
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

10) SAS0891 in NC_002953


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  522 bits (1971),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 333/401 (84%), Positives = 382/401 (96%), Gaps = 0/401 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHTLLDEWLEYHIKTSGSKVTTLNNIKTRVKNIKKNSAKELLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG KVTTL+N+KTR+KNIKKNS+++LLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQMFINKLSSIYSTNQLRYQLGHMKEAIKYAVKFYDYPNEHLLTGVKLPKKRKTIEDIE  180
            YMQ FIN LS++YS+NQ++ QLGHMKEAIKYAVKFY+YPNEH+L +V LPKK KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDEAKMYNYLELQQVIQIRDFILNYNSLHYRTRILIAGALEVQALTGMRIGELLALQIKD  240
            K+EAKMYNYLE++QVIQIRDFILN ++++YR+RIL+AGA+EVQALTGMRIGELLALQ+KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTLHRIKCNTGFGYKDTTKTTGSKRNITINSRTAKVLKKIMLENKKMKQ  300
            VDLKNKTIDINGT+HRIKCN+GFG KDTTKT+GSKR+I+INSR A+VLKKIMLENKKM+Q
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WKPSYIDRGFLFTTSKGNPLQIDKINKLLSLAAESLNINKKVTTHTLRHTHISLLVEMNV  360
            W P+Y+DRGF+FTT +GNP+Q  +INK LS AAESLNINKKVTTHTLRHTHISLL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELDRKLEKLIY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDREL++KLEKL+Y
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

11) SaurJH1_1039 in NC_009632


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  520 bits (1960),  Expect = 8e-149, Method: Compositional matrix adjust.
 Identities = 334/401 (84%), Positives = 382/401 (96%), Gaps = 0/401 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKDTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNK+TKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHTLLEEWLEYHIKTSGSKVTTLNNIKTRVKNIkknsskdlllnkldTK  120
            +KSS+ELKTLTFH+LL+EWLEYH KTSG KVTTL+N+KTR+KNIKKNSS++LLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQMFINKLSSIYSTNQLRYQLGHMKEAIKYAVKFYDYPNEHLLTGVKLPKKRKTIEDIE  180
            YMQ FIN LS++YS+NQ++ QLGHMKEAIKYAVKFY+YPNEH+L +V LPKK KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDEAKMYNYLELQQVIQIRDFILNYNSLHYRTRILIAGALEVQALTGMRIGELLALQIKD  240
            K+EAKMYNYLE++QVIQIRDFILN ++++YR+RIL+AGA+EVQALTGMRIGELLALQ+KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTLHRIKCNTGFGYKDTTKTTGSKRNITINSRTAKVLKKIMLENKKMKQ  300
            VDLKNKTIDINGT+HRIKCN+GFG KDTTKT+GSKR+I+INSR A+VLKKIMLENKKM+Q
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WKPSYIDRGFLFTTSKGNPLQIDKINKLLSLAAESLNINKKVTTHTLRHTHISLLVEMNI  360
            W P+Y+DRGF+FTT +GNP+Q  +INK LS AAESLNINKKVTTHTLRHTHISLL EMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELDRKLEKLIY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDREL++KLEKL+Y
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

12) SaurJH9_1020 in NC_009487


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  520 bits (1960),  Expect = 8e-149, Method: Compositional matrix adjust.
 Identities = 334/401 (84%), Positives = 382/401 (96%), Gaps = 0/401 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKDTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNK+TKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHTLLEEWLEYHIKTSGSKVTTLNNIKTRVKNIkknsskdlllnkldTK  120
            +KSS+ELKTLTFH+LL+EWLEYH KTSG KVTTL+N+KTR+KNIKKNSS++LLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQMFINKLSSIYSTNQLRYQLGHMKEAIKYAVKFYDYPNEHLLTGVKLPKKRKTIEDIE  180
            YMQ FIN LS++YS+NQ++ QLGHMKEAIKYAVKFY+YPNEH+L +V LPKK KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDEAKMYNYLELQQVIQIRDFILNYNSLHYRTRILIAGALEVQALTGMRIGELLALQIKD  240
            K+EAKMYNYLE++QVIQIRDFILN ++++YR+RIL+AGA+EVQALTGMRIGELLALQ+KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  VDLKNKTIDINGTLHRIKCNTGFGYKDTTKTTGSKRNITINSRTAKVLKKIMLENKKMKQ  300
            VDLKNKTIDINGT+HRIKCN+GFG KDTTKT+GSKR+I+INSR A+VLKKIMLENKKM+Q
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WKPSYIDRGFLFTTSKGNPLQIDKINKLLSLAAESLNINKKVTTHTLRHTHISLLVEMNI  360
            W P+Y+DRGF+FTT +GNP+Q  +INK LS AAESLNINKKVTTHTLRHTHISLL EMNI
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELDRKLEKLIY  401
            SLKAIMKRVGHTDEKTTIKVYTHVTEKMDREL++KLEKL+Y
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKLVY  401

13) SABB_00412 in NC_021670


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEDGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

14) CA347_1485 in NC_021554


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

15) SAEMRSA15_14090 in NC_017763


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

16) SAA6159_01417 in NC_017338


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

17) M013TW_1502 in NC_016928


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

18) BN843_14930 in NC_021059


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

19) SA957_1443 in NC_022442


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

20) SAUSA300_1438 in NC_007793


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

21) USA300HOU_1490 in NC_010079


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  438 bits (1650),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

22) int2 in NC_017342


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  437 bits (1645),  Expect = 7e-124, Method: Compositional matrix adjust.
 Identities = 297/399 (75%), Positives = 356/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikiriknikrYCSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RIKNIK+  S+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

23) SAOUHSC_01582 in NC_007795


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  437 bits (1644),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 298/399 (75%), Positives = 356/399 (90%), Gaps = 0/399 (0%)

Query  1    MWIEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MWIEKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikiriknikrYCSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RIKNIK+  S+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLQKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND+++Q R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEKGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

24) SAPIG1554 in NC_017333


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  424 bits (1595),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 290/392 (74%), Positives = 350/392 (90%), Gaps = 0/392 (0%)

Query  5    NKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikeklnnksssel  64
            NKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL++KSS+EL
Sbjct  8    NKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLHDKSSNEL  67

Query  65   kTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTKYMQIFIN  124
            KTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTKYMQ FIN
Sbjct  68   KTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFIN  127

Query  125  KLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIEKDESKMY  184
             LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIEK+E+KMY
Sbjct  128  ELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIEKEEAKMY  187

Query  185  NYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKDIDLLNKT  244
            NYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD+DL NKT
Sbjct  188  NYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKDVDLKNKT  247

Query  245  INITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKRWNSSYVD  304
            I+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++W+++YVD
Sbjct  248  IDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPNYVD  307

Query  305  RGFIFTTKKGNPLCNNQITGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNVSLKAIMK  364
            RGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+SLKAIMK
Sbjct  308  RGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMK  367

Query  365  RVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  396
            RVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  368  RVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

25) SAAG_01400 in NC_022113


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  420 bits (1582),  Expect = 7e-119, Method: Compositional matrix adjust.
 Identities = 296/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

26) SAR1562 in NC_002952


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  420 bits (1582),  Expect = 7e-119, Method: Compositional matrix adjust.
 Identities = 296/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

27) int in NC_003923


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  420 bits (1582),  Expect = 7e-119, Method: Compositional matrix adjust.
 Identities = 296/399 (75%), Positives = 357/399 (90%), Gaps = 0/399 (0%)

Query  1    MWfekfknknneTKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRleekikekln  60
            MW+EKFKNKNNET YRYYEKYKDPYTDKWKRVSVVLNKNTKQ+QKEAMFRLEEKIKEKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   nkssselkTLTFHALLDEWLEYHIKTSGSKLTTLnnikirirnikrYSSENLLLNKLDTK  120
            +KSS+ELKTLTFH+LLDEWLEYH KTSG K+TTL+N+K RI+NIK+ SS+NLLLNK+DTK
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YMQIFINKLSDIYSQNQVTRQLGDMKGAIKYAVKFYNYPNEYLLTNVKIPKRRKTIEDIE  180
            YMQ FIN LS++YS NQV RQLG+MK AIKYAVKFYNYPNE +L +V +PK+ KTIEDIE
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  181  KDESKMYNYLEMNQVLQIRDHILNDNKLHKRNRILIASILEVQALTGMRIGELQALQEKD  240
            K+E+KMYNYLEM+QV+QIRD ILND++++ R RIL+A+ +EVQALTGMRIGEL ALQ KD
Sbjct  181  KEEAKMYNYLEMEQVIQIRDFILNDSNMQYRARILVAGAVEVQALTGMRIGELLALQVKD  240

Query  241  IDLLNKTINITGTIHRIKYEEGFGYKDttktisskrsisinsrtVEIFKKIILENKMLKR  300
            +DL NKTI+I GTIHRIK + GFG KDTTKT +SKR I+INSR  +++KKI+LENK +++
Sbjct  241  VDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ  300

Query  301  WNSSYVDRGFIFTTKKGNPLCNNQIAGVLKKTTKALNMNKKVTTHTFRHTHITLLVEMNV  360
            W+++YVDRGFIFTT +GNP+  ++I   L  ++ +LN+NKKVTTHT+RHTHI+LL EMN+
Sbjct  301  WEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI  360

Query  361  SLKAIMKRVGHVDEKTTIRIYTHVTEKMDRELTQKLENI  399
            SLKAIMKRVGH DEKTTI++YTHVTEKMDREL QKLE++
Sbjct  361  SLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

28) A284_11360 in NC_020164


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  306 bits (1145),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 185/406 (46%), Positives = 294/406 (73%), Gaps = 10/406 (2%)

Query  1    MWHEKFTNKHGNVQYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQKRLNERIEAKLN  60
            MW EKF NK+ +  YRYYEKYKDP T+KW+RVSVVLNKN KQ+QKEA  RL+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHAACDEWLEYYKNHSGSKATTIKEKVSNTNTVKNSIDKEVLINNITHT  120
            DK++  LK+LTFH+  DEWLEY  + SG K TT+ +  +  + +K++  +++L+N+I   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YLQDIINEWAKLHSKGHVQSLVIIIRSVFKYAFKYYDLQDISVLDKIDIPKKAKTRDEL-  179
            Y+Q +INE +++ S  +V+  +  ++  +KYA K+Y+  +  +L+ + +PKK+KT +++ 
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  180  --QAKRNNYLEDSEVKELLECFDYLIKHKNHSSRKRNYNMVKAIVQFQIANGMRIGELLA  237
              +AK  NYL   E+ ++++  D+++++ N   R R   +V + V+ Q   GMRIGELLA
Sbjct  181  KEEAKMYNYL---EMEQVIQIRDFILNDSNMQYRAR--ILVAGAVEVQALTGMRIGELLA  235

Query  238  IKSDNINYEDKTLDIDGTINWVTDKETGAFGVKETTKTSKSYRTIGITTQSINLLKTLIL  297
            ++  +++  +KT+DI+GTI+++  K  ++FG K+TTKT+ S R I+I ++  N+LK ++L
Sbjct  236  LQVKDVDLKNKTIDINGTIHRI--KCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKENQWNDNFIDRGYIFTNTAGSPIDLNKINTIIKEATEISSIKKSVTTHTLRHTHIS  357
            ENKK +QW+ N++DRG+IFT   G+P++ ++IN  +  A+E  +I+K VTTHTLRHTHIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  TLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDQMAKDMMNKLEKV  403
             LA++ I+LKAI  RVGH+D KTT+ +YTHVT++M +++ +KLEK+
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

29) int in NC_007168


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  291 bits (1090),  Expect = 5e-80, Method: Compositional matrix adjust.
 Identities = 195/405 (49%), Positives = 291/405 (72%), Gaps = 9/405 (2%)

Query  1    MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRTSVVLNKNGKQSQKEAQKRLNERIEAKLN  60
            MW EKF NK+ ET YRYYEKYKDP T+KW+R SVVLNKN KQ+QKEA  RL+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTNLKTLTFHAACDEWFERYKLTSGSKQSTITTKSYKVAHIKRNIDKDILVENMNAD  120
            DK++ +LKTLTFH+  DEW+E    TSG K +T+     ++ +IK+N  +++L++++++ 
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  VIQDLINSSLKDGLSHKLVKDDLSIIKNILRYAQKKYHITDISYIDDVVMPKKATTREEV  180
             +Q +IN  L +  S + VK +L+ +K+ ++YA K Y+  +   ++ V +PKK+ T E++
Sbjct  121  YMQTFINE-LSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  K---AKRENYLEMAEVLAIVEELNRIANKKRASYMKRSYLFTAYIVEFQVLNGMRIGELL  237
                AK  NYLEM +V+ I +    I N     Y  R  ++ A  VE Q L GMRIGELL
Sbjct  180  EKEEAKMYNYLEMEQVIQIRD---FILNDSNMQYRAR--ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQPDNIDFENKKLVIDGTIHWRKDGNKVGFKDTTKTASSYRTISLTTRSCDILRRVMLE  297
            A+Q  ++D+ NK + I+GTIH+ K     G KDTTKTA+S R I++ +R  ++L+++MLE
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLE  294

Query  298  NKKAVQWEIMYVDRGFIFTSHRGNSLPLTSinrniqiaaqnigiEKHVTSHTMRHSHISL  357
            NKK  QWE  YVDRGFIFT+ +GN++  + IN+ +  AA+++ I+K VT+HT+RH+HISL
Sbjct  295  NKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISL  354

Query  358  LSQLGVSLRAIMERVGHTDHKTTLQIYSHVTEQMDKDMMNKLEKI  402
            L+++ +SL+AIM RVGHTD+KTT+++Y+HVTE+MD+++ +KLEK+
Sbjct  355  LAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

30) int in NC_021670


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  267 bits (1000),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 188/406 (47%), Positives = 293/406 (73%), Gaps = 10/406 (2%)

Query  1    MWHEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRRLNERIEAKLN  60
            MW EKF NK+ ET YRYYEKYKDP T+KW+RVSVVLNKN KQ+QKEA  RL+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DNTPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            D+++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  ---KAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++   I+D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQ-IRDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

31) SARLGA251_07460 in NC_017349


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 184/406 (46%), Positives = 292/406 (72%), Gaps = 10/406 (2%)

Query  1    MWHDKFTNKHGDVQYRFYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW +KF NK+ +  YR+YEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHAASDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH+  DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQIFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q +++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  K---AKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++  I +D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

32) int3 in NC_017342


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  264 bits (985),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 185/406 (46%), Positives = 293/406 (73%), Gaps = 10/406 (2%)

Query  9    MWYEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRRLNERIEAKLN  68
            MW EKF NK+ ET YRYYEKYKDP T+KW+RVSVVLNKN KQ+QKEA  RL+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  69   DNTPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  128
            D+++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  129  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  188
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  189  ---KAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  245
                AK  +YLE++++   I+D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQ-IRDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  246  AIKNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  305
            A++  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  306  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILRESAKDVGIEKEisshilrhshis  365
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  +A  + I+K +++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  366  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  411
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

33) SLGD_02010 in NC_013893


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  264 bits (987),  Expect = 7e-72, Method: Compositional matrix adjust.
 Identities = 186/406 (46%), Positives = 292/406 (72%), Gaps = 10/406 (2%)

Query  1    MWHEKFTNKHGNIQYRFYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW EKF NK+ +  YR+YEKYKDP T+KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHAASDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH+  DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  K---AKRNKYLELNEIQSIIKDINMKAQKMHSCIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++  I +D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFIFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhshis  357
            ENKK  +W+  Y++R FIFT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

34) SAAG_01239 in NC_022113


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  264 bits (986),  Expect = 8e-72, Method: Compositional matrix adjust.
 Identities = 185/406 (46%), Positives = 293/406 (73%), Gaps = 10/406 (2%)

Query  1    MWYEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRRLNERIEAKLN  60
            MW EKF NK+ ET YRYYEKYKDP T+KW+RVSVVLNKN KQ+QKEA  RL+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DNTPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            D+++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  ---KAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++   I+D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQ-IRDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIKNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A++  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILRESAKDVGIEKEisshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  +A  + I+K +++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

35) SAT0131_00377 in NC_017347


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  259 bits (967),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 165/404 (41%), Positives = 279/404 (70%), Gaps = 11/404 (2%)

Query  1    MWVREI-TKNNSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQKDAQLELNKIIEQRLK  59
            MW+  +  KNN T+YRY E+Y DP T+K K VSV  NKN  ++QK+A + L+  I ++L 
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  60   HNSTKQLEKLTFHDVCDEWLEHYKTHSGSKPTTIKEKKSNANTVKNAIDSKVLISKITHT  119
            ++S+++L  LTFH + DEWLE     SG K TT+ + K+  + +K+    ++L++KI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  120  YLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDISVLDKIDIPKKAQTRNEL-  178
            Y+Q +INE ++  S  +V+  +  ++  +KYA K+Y+  +  +L+ + +PKK++T +++ 
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  179  --QAKRNNYLEDSEVKELLQCFDYLIKHKRHATRKRNYEMVKALVEFQINNGMRIGELLA  236
              +AK  NYL   E+ +++Q  D+++++     R R   +V + VE Q   GMRIGELLA
Sbjct  181  KEEAKMYNYL---EMEQVIQIRDFILNDSNMQYRARI--LVAGAVEVQALTGMRIGELLA  235

Query  237  IKKDNINYEDKTLDIDGTINWVTDKETGAFGVKETTKTSKSYRTIGLTTQSINLLKTLIL  296
            ++  +++  +KT+DI+GTI+++  K  ++FG K+TTKT+ S R I++ ++  N+LK ++L
Sbjct  236  LQVKDVDLKNKTIDINGTIHRI--KCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  297  DNKKENQWNEDFIDRGYVFTNTAGSPIDLNKVNSIIKEATEISSINKRVTTHTLRHTHIS  356
            +NKK +QW+ +++DRG++FT   G+P++ +++N  +  A+E  +INK+VTTHTLRHTHIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  357  TLAQLGINLKAIQDRVGHSDYKTTLEIYTHVTDQMAKDMMNKLE  400
             LA++ I+LKAI  RVGH+D KTT+ +YTHVT++M +++ +KLE
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLE  397

36) SAAV_0787 in NC_013450


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  258 bits (965),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 184/406 (46%), Positives = 291/406 (72%), Gaps = 10/406 (2%)

Query  1    MWYEKFTNKHGETKYRYYEKYKDPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW EKF NK+ ET YRYYEKYKDP T+KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DNTPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            D+++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDELDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++EL S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  ---KAKRNKYLELNEIQSIIKDINMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++   I+D+ ++  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQ-IRDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIKNEVIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A++   +D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILRKSAKDVGIEKEisshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  +A  + I+K +++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

37) SAA6008_00346 in NC_017341


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  242 bits (902),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 169/406 (42%), Positives = 280/406 (69%), Gaps = 11/406 (2%)

Query  1    MWVREI-TKNNSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQKDAQLELNKIIEQRLK  59
            MW+  +  KNN T+YRY E+Y DP T+K K VSV  NKN  ++QK+A + L+  I ++L 
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  60   HYSTKQLENLTFHDACDEWLEHYKTHSGSKPTTIKEKKSNTNTVKNAIDSKVLISKITHT  119
            + S+++L  LTFH   DEWLE     SG K TT+ + K+  + +K+    ++L++KI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  120  YLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDISVLDKIDIPKKAQTRNEF-  178
            Y+Q +INE ++  S  +V+  +  ++  +KYA K+Y+  +  +L+ + +PKK++T +++ 
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  179  --QAKRNNYLEDSEVKELLECFDYLIKHKRHATRKRNYEMVKALVEFQINNGMRIGELLA  236
              +AK  NYL   E+ ++++  D+++++     R R   +V + VE Q   GMRIGELLA
Sbjct  181  KEEAKMYNYL---EMEQVIQIRDFILNDSNMQYRARI--LVAGAVEVQALTGMRIGELLA  235

Query  237  IKTDNVDVENKTLEIDGTINWVTDVVTGAFGVKETTKTSKSYRTIGLTAQSInllkklml  296
            ++  +VD+ NKT++I+GTI+++     ++FG K+TTKT+ S R I++ ++  N+LKK+ML
Sbjct  236  LQVKDVDLKNKTIDINGTIHRIK--CNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  297  enkkenQWNDKFIDRGYIFTNTAGSPIDLNKVNNIIKEATDISSINKRVTTHTLRHTHIS  356
            ENKK +QW+ +++DRG+IFT   G+P++ +++N+ +  A++  +INK+VTTHTLRHTHIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  357  TLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDKMAKDMMNKLEGI  402
             LA++ I+LKAI  RVGH+D KTT+ +YTHVT+KM +++ +KLE +
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

38) SAR0366 in NC_002952


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  242 bits (902),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 169/406 (42%), Positives = 280/406 (69%), Gaps = 11/406 (2%)

Query  1    MWVREI-TKNNSTAYRYLERYTDPLTGKYKTVSVTRNKNNVRSQKDAQLELNKIIEQRLK  59
            MW+  +  KNN T+YRY E+Y DP T+K K VSV  NKN  ++QK+A + L+  I ++L 
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  60   HYSTKQLENLTFHDACDEWLEHYKTHSGSKPTTIKEKKSNTNTVKNAIDSKVLISKITHT  119
            + S+++L  LTFH   DEWLE     SG K TT+ + K+  + +K+    ++L++KI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  120  YLQNIINEWAKSHSIGHVQSLVIVIRSVFKYAFKYYDLHDISVLDKIDIPKKAQTRNEF-  178
            Y+Q +INE ++  S  +V+  +  ++  +KYA K+Y+  +  +L+ + +PKK++T +++ 
Sbjct  121  YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE  180

Query  179  --QAKRNNYLEDSEVKELLECFDYLIKHKRHATRKRNYEMVKALVEFQINNGMRIGELLA  236
              +AK  NYL   E+ ++++  D+++++     R R   +V + VE Q   GMRIGELLA
Sbjct  181  KEEAKMYNYL---EMEQVIQIRDFILNDSNMQYRARI--LVAGAVEVQALTGMRIGELLA  235

Query  237  IKTDNVDVENKTLEIDGTINWVTDVVTGAFGVKETTKTSKSYRTIGLTAQSInllkklml  296
            ++  +VD+ NKT++I+GTI+++     ++FG K+TTKT+ S R I++ ++  N+LKK+ML
Sbjct  236  LQVKDVDLKNKTIDINGTIHRIK--CNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  297  enkkenQWNDKFIDRGYIFTNTAGSPIDLNKVNNIIKEATDISSINKRVTTHTLRHTHIS  356
            ENKK +QW+ +++DRG+IFT   G+P++ +++N+ +  A++  +INK+VTTHTLRHTHIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  357  TLAQLGINLKAIQERVGHSDYKTTLEIYTHVTDKMAKDMMNKLEGI  402
             LA++ I+LKAI  RVGH+D KTT+ +YTHVT+KM +++ +KLE +
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

39) int in NC_017341


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  233 bits (869),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 171/384 (45%), Positives = 275/384 (72%), Gaps = 10/384 (2%)

Query  23   DPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHAASDEWFQN  82
            DP T+KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+DK++  LK+LTFH+  DEW++ 
Sbjct  23   DPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLHDKSSNELKTLTFHSLLDEWLEY  82

Query  83   YIKTSGSKRttiktklsklntlkkFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDA  142
              KTSG K TT+    ++++ +KK   +++L+NKI   Y Q  ++E+ S+ Y  +  K  
Sbjct  83   HTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINEL-SNVYSANQVKRQ  141

Query  143  LSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEVK---AKRNKYLELNEIQSIIKD  199
            L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++    AK  +YLE++++  I +D
Sbjct  142  LGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQI-RD  200

Query  200  INMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHW  259
            + ++  +M+   +    ++VA   E QAL GMRIGE+LA+Q  D+D+ NK+++INGTIH+
Sbjct  201  FILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELLALQVKDVDLKNKTIDINGTIHR  256

Query  260  FHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNH  319
            +  + +GFG KDTTKT +S R I+++SR  ++LKK +LENKK  +W+  Y++R F+FT  
Sbjct  257  IKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPNYVDRGFIFTTC  315

Query  320  KGNPMQTERFNKILREAAKDVGIDKEVsshilrhshisllsQQGVSLKAIMDRVGHSDHR  379
            +GNPMQ  R+NK L  AA  + I+K V++H LRH+HISLL++  +SLKAIM RVGH+D++
Sbjct  316  QGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEK  375

Query  380  TTLSIYSHVTEQMDKDMMNKLEQV  403
            TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  376  TTIKVYTHVTEKMDRELEQKLEKL  399

40) rbsU in NC_017347


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  233 bits (869),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 171/384 (45%), Positives = 275/384 (72%), Gaps = 10/384 (2%)

Query  23   DPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHAASDEWFQN  82
            DP T+KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+DK++  LK+LTFH+  DEW++ 
Sbjct  23   DPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLHDKSSNELKTLTFHSLLDEWLEY  82

Query  83   YIKTSGSKRttiktklsklntlkkFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDA  142
              KTSG K TT+    ++++ +KK   +++L+NKI   Y Q  ++E+ S+ Y  +  K  
Sbjct  83   HTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINEL-SNVYSANQVKRQ  141

Query  143  LSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEVK---AKRNKYLELNEIQSIIKD  199
            L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++    AK  +YLE++++  I +D
Sbjct  142  LGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQI-RD  200

Query  200  INMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHW  259
            + ++  +M+   +    ++VA   E QAL GMRIGE+LA+Q  D+D+ NK+++INGTIH+
Sbjct  201  FILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELLALQVKDVDLKNKTIDINGTIHR  256

Query  260  FHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNH  319
            +  + +GFG KDTTKT +S R I+++SR  ++LKK +LENKK  +W+  Y++R F+FT  
Sbjct  257  IKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPNYVDRGFIFTTC  315

Query  320  KGNPMQTERFNKILREAAKDVGIDKEVsshilrhshisllsQQGVSLKAIMDRVGHSDHR  379
            +GNPMQ  R+NK L  AA  + I+K V++H LRH+HISLL++  +SLKAIM RVGH+D++
Sbjct  316  QGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEK  375

Query  380  TTLSIYSHVTEQMDKDMMNKLEQV  403
            TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  376  TTIKVYTHVTEKMDRELEQKLEKL  399

41) SATW20_08890 in NC_017331


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  233 bits (869),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 171/384 (45%), Positives = 275/384 (72%), Gaps = 10/384 (2%)

Query  23   DPLTNKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHAASDEWFQN  82
            DP T+KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+DK++  LK+LTFH+  DEW++ 
Sbjct  23   DPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLHDKSSNELKTLTFHSLLDEWLEY  82

Query  83   YIKTSGSKRttiktklsklntlkkFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDA  142
              KTSG K TT+    ++++ +KK   +++L+NKI   Y Q  ++E+ S+ Y  +  K  
Sbjct  83   HTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTKYMQTFINEL-SNVYSANQVKRQ  141

Query  143  LSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEVK---AKRNKYLELNEIQSIIKD  199
            L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++    AK  +YLE++++  I +D
Sbjct  142  LGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIEKEEAKMYNYLEMEQVIQI-RD  200

Query  200  INMKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHW  259
            + ++  +M+   +    ++VA   E QAL GMRIGE+LA+Q  D+D+ NK+++INGTIH+
Sbjct  201  FILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELLALQVKDVDLKNKTIDINGTIHR  256

Query  260  FHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNH  319
            +  + +GFG KDTTKT +S R I+++SR  ++LKK +LENKK  +W+  Y++R F+FT  
Sbjct  257  IKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQWEPNYVDRGFIFTTC  315

Query  320  KGNPMQTERFNKILREAAKDVGIDKEVsshilrhshisllsQQGVSLKAIMDRVGHSDHR  379
            +GNPMQ  R+NK L  AA  + I+K V++H LRH+HISLL++  +SLKAIM RVGH+D++
Sbjct  316  QGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNISLKAIMKRVGHTDEK  375

Query  380  TTLSIYSHVTEQMDKDMMNKLEQV  403
            TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  376  TTIKVYTHVTEKMDRELEQKLEKL  399

42) int in NC_007793


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  232 bits (865),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 191/406 (48%), Positives = 293/406 (73%), Gaps = 10/406 (2%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEEKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I EKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKKPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK +  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  K---AKRNKYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

43) USA300HOU_0850 in NC_010079


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  232 bits (865),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 191/406 (48%), Positives = 293/406 (73%), Gaps = 10/406 (2%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEEKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I EKL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKKPTTLKSLTFHVACDEWFQNYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK +  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEV  180
            Y Q  ++E+ S+ Y  +  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +++
Sbjct  121  YMQTFINEL-SNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDI  179

Query  181  K---AKRNKYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEML  237
                AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE+L
Sbjct  180  EKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGELL  234

Query  238  AIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAIL  297
            A+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK +L
Sbjct  235  ALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKIML  293

Query  298  ENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhshis  357
            ENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+HIS
Sbjct  294  ENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHIS  353

Query  358  llsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            LL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  354  LLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

44) SACOL0885 in NC_002951


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  231 bits (863),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 293/408 (72%), Gaps = 14/408 (3%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHVACDEWFQSYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDNKGYVYQVN--KDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYD  178
            Y Q  ++E+ N   VY  N  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +
Sbjct  121  YMQTFINELSN---VYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIE  177

Query  179  EVK---AKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGE  235
            ++    AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE
Sbjct  178  DIEKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGE  232

Query  236  MLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKA  295
            +LA+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK 
Sbjct  233  LLALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKI  291

Query  296  ILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhsh  355
            +LENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+H
Sbjct  292  MLENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTH  351

Query  356  isllsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            ISLL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  352  ISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

45) M013TW_0806 in NC_016928


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  231 bits (863),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 293/408 (72%), Gaps = 14/408 (3%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHVACDEWFQSYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDNKGYVYQVN--KDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYD  178
            Y Q  ++E+ N   VY  N  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +
Sbjct  121  YMQTFINELSN---VYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIE  177

Query  179  EVK---AKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGE  235
            ++    AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE
Sbjct  178  DIEKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGE  232

Query  236  MLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKA  295
            +LA+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK 
Sbjct  233  LLALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKI  291

Query  296  ILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhsh  355
            +LENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+H
Sbjct  292  MLENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTH  351

Query  356  isllsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            ISLL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  352  ISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

46) SA40_0754 in NC_022443


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  231 bits (863),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 293/408 (72%), Gaps = 14/408 (3%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHVACDEWFQSYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDNKGYVYQVN--KDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYD  178
            Y Q  ++E+ N   VY  N  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +
Sbjct  121  YMQTFINELSN---VYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIE  177

Query  179  EVK---AKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGE  235
            ++    AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE
Sbjct  178  DIEKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGE  232

Query  236  MLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKA  295
            +LA+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK 
Sbjct  233  LLALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKI  291

Query  296  ILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhsh  355
            +LENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+H
Sbjct  292  MLENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTH  351

Query  356  isllsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            ISLL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  352  ISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399

47) SA957_0769 in NC_022442


> NC_017337_P1|1|G1|384546538|YP_005735791.1|Staphylococcus_aureus_subsp._aureus_ED133|-|1..1206|-|SAOV_0274|putative 
prophage 
integrase
Length=401

 Score =  231 bits (863),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 192/408 (48%), Positives = 293/408 (72%), Gaps = 14/408 (3%)

Query  1    MWLEKFknknketkyryyekykDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLN  60
            MW+EKFKNKN+ET YRYYEKYKDP T KW+RVSVVLNKN KQ+QKEA   L+E+I  KL+
Sbjct  1    MWIEKFKNKNNETSYRYYEKYKDPYTDKWKRVSVVLNKNTKQAQKEAMFRLEEKIKEKLH  60

Query  61   DKTPTTLKSLTFHVACDEWFQSYIKTSGSKRttiktklsklntlkkFVDEDILINKITLS  120
            DK++  LK+LTFH   DEW++   KTSG K TT+    ++++ +KK   +++L+NKI   
Sbjct  61   DKSSNELKTLTFHSLLDEWLEYHTKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK  120

Query  121  YAQQVFDEMDNKGYVYQVN--KDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYD  178
            Y Q  ++E+ N   VY  N  K  L+  K+ + Y+ ++Y+  + ++L+ +TL K+ K+ +
Sbjct  121  YMQTFINELSN---VYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIE  177

Query  179  EVK---AKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGE  235
            ++    AK  +YLE++++  I +D+  +  +M+   +    ++VA   E QAL GMRIGE
Sbjct  178  DIEKEEAKMYNYLEMEQVIQI-RDFILNDSNMQYRAR----ILVAGAVEVQALTGMRIGE  232

Query  236  MLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKA  295
            +LA+Q  D+D+ NK+++INGTIH++  + +GFG KDTTKT +S R I+++SR  ++LKK 
Sbjct  233  LLALQVKDVDLKNKTIDINGTIHRIKCN-AGFGHKDTTKTAGSKRKIAINSRIANVLKKI  291

Query  296  ILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVsshilrhsh  355
            +LENKK  +W+  Y++R F+FT  +GNPMQ  R+NK L  AA  + I+K V++H LRH+H
Sbjct  292  MLENKKMQQWEPNYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTH  351

Query  356  isllsQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQV  403
            ISLL++  +SLKAIM RVGH+D++TT+ +Y+HVTE+MD+++ +KLE++
Sbjct  352  ISLLAEMNISLKAIMKRVGHTDEKTTIKVYTHVTEKMDRELEQKLEKL  399