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Homologs of HPP12_0437 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPP12_0437
( YP_002301073.1 )

integrase/recombinase XercD family

NC_011498
(Helicobacter pylori P12)

2e-164

100

2) HPIN_08100
( YP_005782885.1 )

integrase/recombinase XercD family protein

NC_017372
(Helicobacter pylori India7)

2e-162

3) xerD
( YP_003728577.1 )

XerCD family integrase/recombinase

NC_014256
(Helicobacter pylori B8)

9e-156

4) HPGAM_05275
( YP_005780731.1 )

integrase/recombinase (XERCD family) protein

NC_017371
(Helicobacter pylori Gambia94/24)

1e-149

5) jhp0951
( NP_223668.1 )

integrase/recombinase (XERCD family)

NC_000921
(Helicobacter pylori J99)

1e-149

6) HPSA_07710
( YP_005772094.1 )

integrase/recombinase XercD family protein

NC_017361
(Helicobacter pylori SouthAfrica7)

6e-142

7) HPSJM_06865
( YP_003929250.1 )

integrase/recombinase XercD family protein

NC_014560
(Helicobacter pylori SJM180)

1e-138

8) K747_09265
( YP_008357488.1 )

hypothetical protein

NC_021215
(Helicobacter pylori UM032)

2e-120

9) K748_03495
( YP_008336602.1 )

hypothetical protein

NC_021882
(Helicobacter pylori UM298)

2e-120

10) K749_08870
( YP_008357711.1 )

hypothetical protein

NC_021216
(Helicobacter pylori UM299)

2e-120

11) HPF30_1167
( YP_005774912.1 )

integrase/recombinase

NC_017365
(Helicobacter pylori F30)

1e-119

12) HPF57_0147
( YP_005776861.1 )

integrase/recombinase

NC_017367
(Helicobacter pylori F57)

2e-115

13) HPLT_07655
( YP_005773631.1 )

integrase/recombinase (xerD)

NC_017362
(Helicobacter pylori Lithuania75)

1e-101

14) HPIN_03725
( YP_005782060.1 )

integrase/recombinase (xerD)

NC_017372
(Helicobacter pylori India7)

2e-101

15) K751_00035
( YP_007983009.1 )

integrase

NC_021218
(Helicobacter pylori UM066)

3e-101

16) xerD
( YP_007536612.1 )

integrase/recombinase

NC_020508
(Helicobacter pylori OK113)

1e-100

17) HCD_02435
( YP_006220717.1 )

integrase/recombinase (xerD)

NC_017735
(Helicobacter cetorum MIT 99-5656)

6e-101

18) HCD_06535
( YP_006221519.1 )

integrase/recombinase (xerD)

NC_017735
(Helicobacter cetorum MIT 99-5656)

6e-101

19) HPSJM_07005
( YP_003929278.1 )

integrase/recombinase (xerD)

NC_014560
(Helicobacter pylori SJM180)

6e-101

20) HP0995
( NP_207786.1 )

integrase/recombinase (xerD)

NC_000915
(Helicobacter pylori 26695)

7e-101

21) C694_05135
( YP_006934911.1 )

integrase/recombinase (xerD)

NC_018939
(Helicobacter pylori 26695)

7e-101

22) C695_05140
( YP_006893476.1 )

integrase/recombinase (xerD)

NC_018937
(Helicobacter pylori Rif1)

7e-101

23) C730_05135
( YP_006936516.1 )

integrase/recombinase (xerD)

NC_018938
(Helicobacter pylori Rif2)

7e-101

24) xerD
( YP_007539008.1 )

integrase/recombinase

NC_020509
(Helicobacter pylori OK310)

8e-101

25) HPELS_04300
( YP_005424974.1 )

integrase/recombinase (xerD)

NC_017063
(Helicobacter pylori ELS37)

9e-101

26) HPAKL117_02165
( YP_007016985.1 )

integrase/recombinase (xerD)

NC_019560
(Helicobacter pylori Aklavik117)

1e-100

27) HPSH112_01400
( YP_006226996.1 )

integrase/recombinase (xerD)

NC_017741
(Helicobacter pylori Shi112)

1e-100

28) HPSH417_07495
( YP_006225109.1 )

integrase/recombinase (xerD)

NC_017739
(Helicobacter pylori Shi417)

2e-100

29) HPGAM_07345
( YP_005781125.1 )

integrase/recombinase (xerD)

NC_017371
(Helicobacter pylori Gambia94/24)

2e-100

30) HPPC18_04855
( YP_006229202.1 )

integrase/recombinase (xerD)

NC_017742
(Helicobacter pylori PeCan18)

2e-100

31) HCW_08255
( YP_006223538.1 )

integrase/recombinase (xerD)

NC_017737
(Helicobacter cetorum MIT 00-7128)

3e-100

32) HPB8_521
( YP_003728542.1 )

hypothetical protein

NC_014256
(Helicobacter pylori B8)

5e-100

33) HPPC_07655
( YP_003927785.1 )

integrase/recombinase (xerD)

NC_014555
(Helicobacter pylori PeCan4)

2e-98

34) K750_00550
( YP_007981478.1 )

integrase

NC_021217
(Helicobacter pylori UM037)

2e-98

35) HPSA20_1106
( YP_008472052.1 )

phage integrase family protein

NC_022130
(Helicobacter pylori SouthAfrica20)

2e-89

36) HPSA_04590
( YP_005771509.1 )

integrase-recombinase protein

NC_017361
(Helicobacter pylori SouthAfrica7)

5e-89

37) xerD2
( YP_005786080.1 )

integrase/recombinase

NC_017375
(Helicobacter pylori 83)

8e-89

38) HPG27_986
( YP_002266605.1 )

integrase-recombinase protein

NC_011333
(Helicobacter pylori G27)

1e-88

39) K751_06650
( YP_007984285.1 )

integrase

NC_021218
(Helicobacter pylori UM066)

2e-88

40) xerD
( YP_005784647.1 )

integrase/recombinase

NC_017375
(Helicobacter pylori 83)

4e-88

41) HPCU_01345
( YP_005766357.1 )

integrase/recombinase (xerD)

NC_017358
(Helicobacter pylori Cuz20)

5e-88

42) HPF57_0311
( YP_005777025.1 )

integrase/recombinase

NC_017367
(Helicobacter pylori F57)

5e-88

43) HPSH112_06950
( YP_006228070.1 )

integrase/recombinase XerD

NC_017741
(Helicobacter pylori Shi112)

9e-88

44) HPSH169_01210
( YP_006225436.1 )

integrase/recombinase XerD

NC_017740
(Helicobacter pylori Shi169)

9e-88

45) HPSH417_05675
( YP_006224753.1 )

integrase/recombinase XerD

NC_017739
(Helicobacter pylori Shi417)

9e-88

46) HPSH_04480
( YP_001910361.1 )

integrase/recombinase XerD

NC_010698
(Helicobacter pylori Shi470)

9e-88

47) HPAKL117_07520
( YP_007018020.1 )

integrase-recombinase protein

NC_019560
(Helicobacter pylori Aklavik117)

1e-87

48) xerD
( YP_007536476.1 )

integrase/recombinase

NC_020508
(Helicobacter pylori OK113)

1e-61

• Sequence Alignments

1) HPP12_0437 in NC_011498


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  572 bits (2158),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240
            EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357
            HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE
Sbjct  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

2) HPIN_08100 in NC_017372


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  565 bits (2133),  Expect = 2e-162, Method: Compositional matrix adjust.
 Identities = 351/357 (99%), Positives = 355/357 (99%), Gaps = 0/357 (0%)

Query  1    MSDCKMSRVSRELFNNIKSFLHYKLKTMIRIQSMNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELFNNIKSFLH KLKTMIRIQS+NDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VMYLRQFFDYLD+KRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYTYIEKEFLQVP  240
            EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERY+YIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDIKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300
            LNAWLSD KRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357
            HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE
Sbjct  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

3) xerD in NC_014256


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  543 bits (2048),  Expect = 9e-156, Method: Compositional matrix adjust.
 Identities = 346/357 (97%), Positives = 354/357 (99%), Gaps = 0/357 (0%)

Query  1    MSDCKMNRVSRKLFDNIKSFLHYKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKM+RVSR LF+NIKSFLH KLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   RKLYNQGVRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLTKNRKPSSMAKY  120
            RKLYNQG+RHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGL+KNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRNYSFEFELKNLSFAKKETHLPKHLNKNDFKAFVQALLKYHPKTSF  180
            VMYLRQFFDYLD+KRNYSF+FELKNLSFAKKETHLPKHLNKNDFKAF+QALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP  240
            EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDATQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357
            HSFATFIYD TQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE
Sbjct  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

4) HPGAM_05275 in NC_017371


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  522 bits (1970),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 337/357 (95%), Positives = 350/357 (99%), Gaps = 0/357 (0%)

Query  1    MSDCKMSRVSRELFDNIKSFLHYKLKTMIRIQSVNDLELILKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELF+NIKSFLH KLKTMIRIQSVNDL+L+LKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGVRHTIMMQGLFLFFEYFDNRIKLKSLCNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            +KLYNQG+RHTIMMQGLFLFFEYFDNRIKLKSL NLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMVLRQFFDYLDRKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYRPKTSF  180
            VM LRQFFDYLD+KRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKY+PKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIALGGLRKFEALDLELKNIALENNHYRLLIKGKNNQERYAYIEKEFLQVP  240
            EKRNQCILLLI LGGLRKFEALDLELKNIALENNHYRLLIKGKNN+ERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDENSYGLGLHLFR  300
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNID +SYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLKGWLKDEKSD  357
            HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVL G L++EKS+
Sbjct  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

5) jhp0951 in NC_000921


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  522 bits (1969),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 337/357 (95%), Positives = 349/357 (98%), Gaps = 0/357 (0%)

Query  1    MSDCKMSRVSRELFDNIKSFLHYKFKTMIRIQSVNDLELILKWQDRVLECQSFIALKELN  60
            MSDCKMSRVSRELF+NIKSFLH K+KTMIRIQSVNDL+L+LKWQDRVLECQS+IALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGVRHTIMMQGLFLFFEYFDNRIKLKSLRNLAEEQVIDFLFGLVKNRKPSSMAKY  120
            +KLYNQG+RHTIMMQGLFLFFEYFDNRIKLKSL+NLAEEQVIDFLFGL KNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMVLRQFFDYLDRKRNYSFDFELKNLSFAKKEMYLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VM LRQFFDYLD+KRNYSFDFELKNLSFAKKE  LPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIALGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP  240
            EKRNQCILLLI LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVTLVLKGWLKNEKSE  357
            HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKV+LVL G L+NEKSE
Sbjct  301  HSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

6) HPSA_07710 in NC_017361


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  496 bits (1872),  Expect = 6e-142, Method: Compositional matrix adjust.
 Identities = 322/330 (98%), Positives = 329/330 (99%), Gaps = 0/330 (0%)

Query  1    MIRIQSVNDLQLVLKWQDRVLECQSLIALKELNHKLYNQGIRHTIMMQGLFLFFEYFDNR  60
            MIRIQSVNDLQLVLKWQDRVLECQSLIALKELN+KLYNQGIRHTIMMQGLFLFFEYFDNR
Sbjct  28   MIRIQSVNDLQLVLKWQDRVLECQSLIALKELNRKLYNQGIRHTIMMQGLFLFFEYFDNR  87

Query  61   IKLKSLRNLAEEQVIDFLFGLAKNRKSSSMAKYVMYLRQFFDYLDRKRNYNFDFELKNLS  120
            IKLKSL+NLAEEQVIDFLFGLAKNRK+SSMAKYVMYLRQFFDYLD+KRNY+FDFELKNLS
Sbjct  88   IKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYLRQFFDYLDKKRNYSFDFELKNLS  147

Query  121  FAKKETHLPKHLNKNDFKAFIYALLKYHPKTSFEKRNQCILLLIVLGGLRKFEALDLELK  180
            FAKKETHLPKHLNKNDFKAFI ALLKYHPKTSFEKRNQCILLLIVLGGLRKFEALDLELK
Sbjct  148  FAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRNQCILLLIVLGGLRKFEALDLELK  207

Query  181  NIALENNHYRLLIKGKNNKERYAYIEKEFLQVPLNAWLSDTKRLKSFKGRFVFKKAKNNT  240
            NIALENNHYRLLIKGKNNKERYAYIEKEFLQ+PLNAWLSDTKRLKSFKGRFVFKKAKNNT
Sbjct  208  NIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAWLSDTKRLKSFKGRFVFKKAKNNT  267

Query  241  TQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSRALGHSSLL  300
            TQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSRALGHSSLL
Sbjct  268  TQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSRALGHSSLL  327

Query  301  STKIYIHTTQEHNKKVALVLGGLLRNEKNE  330
            STKIYIHTTQEHNKKVALVLGGLLRNEK+E
Sbjct  328  STKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

7) HPSJM_06865 in NC_014560


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  485 bits (1829),  Expect = 1e-138, Method: Compositional matrix adjust.
 Identities = 309/322 (96%), Positives = 319/322 (99%), Gaps = 0/322 (0%)

Query  1    MSDCKMNRVSRELFDNIKSFLHYKLKTMIRIQSVNDLELILKWQDRVLECQSLIALKELN  60
            MSDCKM+RVSRELF+NIKSFLH KLKTMIRIQSVNDL+L+LKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGVRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            +KLYNQG+RHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMVLRQFFDYLDRKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VM LRQFFDYLD+KRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCILLLIALGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240
            EKRNQCILLLI LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFR  300

Query  301  HSFATFIYDETQDLVLTSKSVG  322
            HSFATFIYDETQDLVLTS+++G
Sbjct  301  HSFATFIYDETQDLVLTSRALG  322

8) K747_09265 in NC_021215


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  424 bits (1597),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 273/281 (98%), Positives = 280/281 (99%), Gaps = 0/281 (0%)

Query  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            +KLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRNYNFEFELKNLSFTKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VMYLRQFFDYLD+KRNY+F+FELKNLSF+KKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCilllialgglkkFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP  240
            EKRNQCILLLI LGGL+KFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281

9) K748_03495 in NC_021882


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  424 bits (1597),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 273/281 (98%), Positives = 280/281 (99%), Gaps = 0/281 (0%)

Query  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            +KLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRNYNFEFELKNLSFTKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VMYLRQFFDYLD+KRNY+F+FELKNLSF+KKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCilllialgglkkFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP  240
            EKRNQCILLLI LGGL+KFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281

10) K749_08870 in NC_021216


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  424 bits (1597),  Expect = 2e-120, Method: Compositional matrix adjust.
 Identities = 273/281 (98%), Positives = 280/281 (99%), Gaps = 0/281 (0%)

Query  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60
            MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120
            +KLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRNYNFEFELKNLSFTKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180
            VMYLRQFFDYLD+KRNY+F+FELKNLSF+KKETHLPKHLNKNDFKAFIQALLKYHPKTSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNQCilllialgglkkFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP  240
            EKRNQCILLLI LGGL+KFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+P
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281
            LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKI  281

11) HPF30_1167 in NC_017365


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  422 bits (1589),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 276/285 (97%), Positives = 282/285 (99%), Gaps = 0/285 (0%)

Query  1    MMQGLFLFFEYFDNRIKLKSLHNLAEEQIIDFLFGLAKNRKPSSMAKYVMYLRQFFDCLD  60
            MMQGLFLFFEYFDNRIKLKSLHNLAEEQ+IDFLFGLAKNRKPSSMAKYVMYLRQFFD LD
Sbjct  73   MMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYLRQFFDYLD  132

Query  61   RKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFVQALLKYHPKTSFEKRNQCILLLIA  120
            +KRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAF+QALLKYHPKTSFEKRNQCILLLI 
Sbjct  133  KKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRNQCILLLIV  192

Query  121  LGGLRKFEALYLELKNIALENNHYRLLIKDKNNKERYAYIEKEFLQVPLNAWLSDTKRLK  180
            LGGLRKFEAL LELKNIALENNHYRLLIK+KNNKERYAYIEKEFLQ+PLNAWLSDTKRLK
Sbjct  193  LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAWLSDTKRLK  252

Query  181  SFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQ  240
            SFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQ
Sbjct  253  SFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQ  312

Query  241  DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGVLRNEKSE  285
            DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGG+LRNEKSE
Sbjct  313  DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE  357

12) HPF57_0147 in NC_017367


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  408 bits (1536),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 275/286 (97%), Positives = 280/286 (98%), Gaps = 1/286 (0%)

Query  1    MMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMCLRQFFDYLD  60
            MMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVM LRQFFDYLD
Sbjct  73   MMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYLRQFFDYLD  132

Query  61   RKRNYSFEFELKNLSFTKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKCNQCILLLIA  120
            +KRNYSF+FELKNLSF+KKETHLPKHLNKNDFKAFIQALLKYHPKTSFEK NQCILLLI 
Sbjct  133  KKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRNQCILLLIV  192

Query  121  LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVPLNAWLSDTKRLK  180
            LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQ+PLNAWLSDTKRLK
Sbjct  193  LGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAWLSDTKRLK  252

Query  181  SFKGRFVFKKAKNNTTQKTCSLKGFIVKIFKLSNIDVKSYGLGLHLFRHSFATFIYDEAQ  240
            SFKGRFVFKKAKNNTTQKTCSLKGFI KIFKLSNIDVKSYGLGLHLFRHSFATFIYDE+Q
Sbjct  253  SFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQ  312

Query  241  DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVlgggllRNEKSE  286
            DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV  GGLLRNEKSE
Sbjct  313  DLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV-LGGLLRNEKSE  357

13) HPLT_07655 in NC_017362


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  363 bits (1362),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 225/356 (64%), Positives = 296/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKYEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK+E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

14) HPIN_03725 in NC_017372


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  362 bits (1361),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 225/356 (64%), Positives = 299/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNRLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMALILNTQDKILKCHNIEQLKQLC  60
            M + ++++  RELF+N+K+FL  K+K    IQ VND+ L+L+ QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFDYFKDNLKLRSFRVLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYSFDFALKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSF  180
            VMYLRQFFDYLD+K++YSFDF LKNL+FAK    LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLSIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLELS  240
            EKRN+CILL+++LGGLRK E L +ELK+I +E+++Y +LI+GK  KER AYI K +L+++
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGVYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

15) K751_00035 in NC_021218


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  361 bits (1358),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 226/356 (64%), Positives = 298/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMALILNTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF+N+K+FL  K+K    IQ VND+ L+L+ QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFDYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYSFDFALKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSF  180
            VMYLRQFFDYLD+K++YSFDF LKNL+FAK    LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLSIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L +ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGVYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

16) xerD in NC_020508


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1351),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 225/356 (64%), Positives = 298/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMALILNTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF+N+K+FL  K+K    IQ VND+ L+L+ QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFDYFKDNLKLRSFRMLSEEQVINFLFELAQNRNPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NR+PSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYSFDFALKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSF  180
            VMYLRQFFDYLD+K++YSFDF LKNL+FAK    LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGVYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLTENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L  N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

17) HCD_02435 in NC_017735


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1354),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMAFILDTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF+N+K+FL  K+K    IQ VND+ ++L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRTLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKRYSFDFTLKNLAFAKIKESLPRHLNDKDLKSFLKTLLDYKPTTSY  180
            VMYLRQFFDYLD+K+ YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TS+
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

18) HCD_06535 in NC_017735


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1354),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMAFILDTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF+N+K+FL  K+K    IQ VND+ ++L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRTLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKRYSFDFTLKNLAFAKIKESLPRHLNDKDLKSFLKTLLDYKPTTSY  180
            VMYLRQFFDYLD+K+ YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TS+
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

19) HPSJM_07005 in NC_014560


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1354),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 222/356 (63%), Positives = 299/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILNTQNKILKCHNVEQLRQLC  60
            M + K+++  RELF+N+K FL  K+K    IQ VND+ L+L+ Q+++L C+++  L++L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLNYKDLKSFLKTLLEYKPTTSF  180
            VMYLRQFFDYLD+K++Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLELS  240
            EKRN+C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+++
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDCRLKYFNGAYLFKKDKQK-SQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

20) C694_05135 in NC_018939


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L +FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ + K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

21) HP0995 in NC_000915


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L +FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ + K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

22) C695_05140 in NC_018937


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L +FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ + K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

23) C730_05135 in NC_018938


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1353),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L +FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ + K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

24) xerD in NC_020509


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1352),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 223/356 (63%), Positives = 298/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTNVKNFTPIQDVKDMALILDTQDKILKCHNIDQLKQLC  60
            M + K+++  RELF+N+K+FL  ++K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFDYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYSFDFTLKNLAFAKTKENLPRHLNYKDLKAFLKTLLEYSPTTSF  180
            VMYLRQFFDYLD+K++YSFDF LKNL+FAK   +LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKVYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER  YI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGVYLFKKDKQK-AQNSLTLYNFISLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

25) HPELS_04300 in NC_017063


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  360 bits (1351),  Expect = 9e-101, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 296/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQDHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQ+HNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

26) HPAKL117_02165 in NC_019560


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  359 bits (1349),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 222/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILDTQNKILKCHNVEQLRQLC  60
            M + K+++  RELF+N+K FL  K+K    IQ VND+ L+L  Q+++L C+++  L++L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLNYKDLKSFLKTLLEYKPTTSF  180
            VMYLRQFFDYLD+K++Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-SQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

27) HPSH112_01400 in NC_017741


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  359 bits (1349),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 223/356 (63%), Positives = 298/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILNTQNKVLKCNNVEQLRQLC  60
            M + K+++  RELF+N+K FL  K+K    IQ VND+ L+L+ Q++VL C+++  L++L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLNYKDLKSFLKTLLEYKPTTSF  180
            VMYLRQFFDYLD+K++Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-SQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIDNKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

28) HPSH417_07495 in NC_017739


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 223/356 (63%), Positives = 297/356 (84%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILDTQNKVLKCNNVEQLRQLC  60
            M + K+++  RELF+N+K FL  K+K    IQ VND+ L+L  Q++VL C+++  L++L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLNYKDLKSFLKTLLEYKPTTSF  180
            VMYLRQFFDYLD+K++Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-SQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

29) HPGAM_07345 in NC_017371


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  358 bits (1346),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 223/357 (63%), Positives = 296/357 (83%), Gaps = 2/357 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYGFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSMALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKKG  356
            RHSFAT+IY+ETQDLVLTS ALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K+
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKS  356

30) HPPC18_04855 in NC_017742


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  358 bits (1346),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 295/356 (83%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLVFAKTKESLPRHLNDKDLKSFLKTLLDYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQEAQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+E+QDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

31) HCW_08255 in NC_017737


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  358 bits (1346),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 223/352 (64%), Positives = 293/352 (84%), Gaps = 2/352 (0%)

Query  5    KLTKSQRELFDNIKAFLVAKVKNFTPIQDVNDMALILDIQNKVLKCHNIEQLKSLCHILY  64
            K+++  RELF+NIK+FL  K+K    IQ VND+ L+L  Q++VL C+++  LK L + LY
Sbjct  5    KMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELNRKLY  64

Query  65   NQGIKHTIMMQGLFLFFDYFKNNLKLRSFRMLSEEQVINFLFNLAQNRKPSSMAKYVMYL  124
            NQGI+HTIMMQGLFLFF+YF N +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKYVMYL
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  125  RQFFDYLDRKKRYSFDFMLKNLAFAKTKESLPRHLNDKDLKSFLKTLLEYKPTTSHEKRN  184
            RQFFDYLD+K+ YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TS EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  185  KCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPSLNAW  244
            +C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +LNAW
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  245  LSDDYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSF  303
            LSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLFRHSF  303

Query  304  ATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIDSKK  355
            AT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ + K
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

32) HPB8_521 in NC_014256


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  357 bits (1342),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 224/356 (63%), Positives = 295/356 (83%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKTSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRK SSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLNDKDLKSFLKTLLGYKPATSF  180
            VMYLRQFFDYLD+KR YSFDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

33) HPPC_07655 in NC_014555


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 221/356 (63%), Positives = 295/356 (83%), Gaps = 2/356 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMALILDTQNKVLKCHDVEQLRQLC  60
            M + K+++  RELF+N+K+FL  K+K    IQ VND+ L+L  Q++VL C+ +  L++L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFFEYF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLNYKDLKSFLKTLLEYKPTTSF  180
            VMYLRQFFDYLD+K++Y+FDF LKNL+FAK    LP+HLN +D+K+F+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCVLLIVMLGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+C+LL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGAYLFKKDKQK-SQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIDIHTTQEYNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKI IHTTQE NKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

34) K750_00550 in NC_021217


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  352 bits (1323),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 223/356 (63%), Positives = 296/356 (84%), Gaps = 2/356 (0%)

Query  1    MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLC  60
            M++ K+++  RELF N+K+FL  K K    IQ V+D+ L+L  QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTIMMQGLFLFFNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HTIMMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMVLRQFFDYLDRKKHYSFDFAFKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSF  180
            VM LRQFFDYLD+K++YSFDF +KNL+FAK    LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDEYRLKYFNGAYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK  355
            RHSFAT+IY+ETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALV+++L+ N K
Sbjct  300  RHSFATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEK  355

35) HPSA20_1106 in NC_022130


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  322 bits (1207),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 199/350 (57%), Positives = 277/350 (80%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHRDNLPKHLNSKDLKSFICTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFDLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E +DLEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LSDSKRLSSFNGRFIFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            LSD+KRL SF+GRF+FKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYDESRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSE  358
            AT++YDE++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL +
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

36) HPSA_04590 in NC_017361


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  321 bits (1204),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 198/350 (57%), Positives = 276/350 (79%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHRDNLPKHLNSKDLKSFICTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFDLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E +DLEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LSDSKRLSSFNGRFIFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            LSD+KRL SF+GRF+FKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAESRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSE  358
            AT++Y E++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL +
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

37) xerD2 in NC_017375


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  320 bits (1200),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 197/350 (57%), Positives = 274/350 (79%), Gaps = 3/350 (0%)

Query  10   LSRSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            +SR  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYKTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y  ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVAIIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA++++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

38) HPG27_986 in NC_011333


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  319 bits (1198),  Expect = 1e-88, Method: Compositional matrix adjust.
 Identities = 197/350 (57%), Positives = 274/350 (79%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENVKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTRHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG RH +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

39) K751_06650 in NC_021218


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  319 bits (1195),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 194/350 (56%), Positives = 276/350 (79%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGIRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ ++++ D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYL  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMYL
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYERRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+E+RN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNRERKAFIRREILEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNN+ER A+I +E+L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSE  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL +
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

40) xerD in NC_017375


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  318 bits (1191),  Expect = 4e-88, Method: Compositional matrix adjust.
 Identities = 196/322 (61%), Positives = 267/322 (83%), Gaps = 2/322 (0%)

Query  1    MLNNKLTKSQRELFDNLKAFLYTNVKNFTPIQDVNDMALILNTQDKILKCHNIEQLKQLC  60
            M + K+++  RELF+N+K+FL  ++K    IQ VND+ L+L+ QD++L C+++  LK+L 
Sbjct  1    MSDCKMSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELN  60

Query  61   HILYNQGIKHTVMMQGLFLFFDYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKY  120
            + LYNQGI+HT+MMQGLFLFF+YF + +KL+S++ L+EEQVI+FLF LA+NRKPSSMAKY
Sbjct  61   RKLYNQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKY  120

Query  121  VMYLRQFFDYLDRKKHYSFDFVLKNLAFAKTKESLPRHLNYKDLKAFLKTLLEYSPATSF  180
            VMYLRQFFDYLD+K++YSFDF LKNL+FAK    LP+HLN +D+KAF+++LL Y P TSF
Sbjct  121  VMYLRQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSF  180

Query  181  EKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS  240
            EKRN+CILL+++LGGLRK E L++ELK+I +E+++Y +LI+GK  KER AYI K +L+ +
Sbjct  181  EKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP  240

Query  241  LNAWLSDDYRLKYFNGVYLFKKDKQK-AQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLF  299
            LNAWLSD  RLK F+G ++FKK K++ +Q++ +L  FI+ IFKL++I + K YG GLHLF
Sbjct  241  LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNI-DVKSYGLGLHLF  299

Query  300  RHSFATLIYQETQDLVLTSRAL  321
            RHSFAT+IY+ETQDLVLTSRAL
Sbjct  300  RHSFATFIYDETQDLVLTSRAL  321

41) HPCU_01345 in NC_017358


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  318 bits (1191),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 195/350 (56%), Positives = 273/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF + +K+K L+ + EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

42) HPF57_0311 in NC_017367


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  317 bits (1190),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 195/350 (56%), Positives = 272/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCANIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C ++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVVSIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+V  +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

43) HPSH112_06950 in NC_017741


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  317 bits (1187),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 194/350 (56%), Positives = 273/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF + +K+K L+ + EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFVYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+F+ +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKYCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

44) HPSH169_01210 in NC_017740


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  317 bits (1187),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 194/350 (56%), Positives = 273/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF + +K+K L+ + EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFVYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+F+ +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKYCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

45) HPSH417_05675 in NC_017739


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  317 bits (1187),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 194/350 (56%), Positives = 273/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF + +K+K L+ + EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFVYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+F+ +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKYCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

46) HPSH_04480 in NC_010698


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  317 bits (1187),  Expect = 9e-88, Method: Compositional matrix adjust.
 Identities = 194/350 (56%), Positives = 273/350 (78%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKNLKVKRLRLINEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF + +K+K L+ + EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFVYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+F+ +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGRFVFKKSLSNYTQKYCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+GRFVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

47) HPAKL117_07520 in NC_019560


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  316 bits (1186),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 195/350 (56%), Positives = 274/350 (79%), Gaps = 3/350 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHIIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYI  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK +SMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYEKRN  188
            RQFFDYLD+ ++Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSSFNGHFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSF  308
            L+D+KRL SF+G+FVFKK+ +N TQK CS+  F+ KIF LS I+  K YG GLHLFRHSF
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDV-KSYGLGLHLFRHSF  303

Query  309  ATLVYAKSRDIVLTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG  358
            AT++Y  ++D+VLTSRALGH SL STKIYIHT+QE NK+VA +++ LL  
Sbjct  304  ATFIYDETQDLVLTSRALGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRN  353

48) xerD in NC_020508


> NC_011498_P1|1|G1|210134634|YP_002301073.1|Helicobacter_pylori_P12|+|1..1074|-|HPP12_0437|integrase/recombinase 
XercD family
Length=357

 Score =  229 bits (854),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 140/264 (54%), Positives = 206/264 (79%), Gaps = 2/264 (0%)

Query  10   LARSQRELFVGIRDFIVFKFKRMVVFNGVRDFT-KMRFLSIELEKCENIKDLEKLCHTIY  68
            ++R  RELF  I+ F+  K+K M+ +++V D+   ++     LE C+++  L  L + +Y
Sbjct  6    MSRVSRELFNNIKSFLHHKLKTMIRIQSVNDLQLVLKWQDRVLE-CQSLIALKELNRKLY  64

Query  69   NQGTKHILMMRVLFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKISSMAKYVMYV  128
            NQG +H +MM+ LFLFF+YF +++K+K L+ L EE +++FLF LAK+RK SSMAKYVMY+
Sbjct  65   NQGIRHTIMMQGLFLFFEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMYL  124

Query  129  RQFFDYLDRTKCYEFYFSLKNIAFAKHKDNLPKHLNSKDLKSFIYTLINYRTRSSYEKRN  188
            RQFFDYLD+ + Y F F LKN++FAK   +LPKHLN +D+K+FI +L++Y+ ++S+EKRN
Sbjct  125  RQFFDYLDKKRNYSFDFELKNLSFAKKETHLPKHLNKNDFKAFIQALLKYHPKTSFEKRN  184

Query  189  KCillliilgglRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREMLEKSLDEW  248
            +CILLLI+LGGLRK E ++LEL+NI LE++HY LLIKGKNNKER A+I +E L+ +L+ W
Sbjct  185  QCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIPLNAW  244

Query  249  LGDSKRLSNFNGRFVFKKSLSSKA  272
            L+D+KRL +F+GRFVFKK+ ++ +
Sbjct  245  LSDTKRLKSFKGRFVFKKAKNNTT  268