Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
integrase/recombinase XercD family |
NC_011498 (Helicobacter pylori P12) |
2e-164 |
100 |
|
integrase/recombinase XercD family protein |
NC_017372 (Helicobacter pylori India7) |
2e-162 |
99 |
|
XerCD family integrase/recombinase |
NC_014256 (Helicobacter pylori B8) |
9e-156 |
97 |
|
integrase/recombinase (XERCD family) protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
1e-149 |
95 |
|
integrase/recombinase (XERCD family) |
NC_000921 (Helicobacter pylori J99) |
1e-149 |
95 |
|
integrase/recombinase XercD family protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
6e-142 |
98 |
|
integrase/recombinase XercD family protein |
NC_014560 (Helicobacter pylori SJM180) |
1e-138 |
96 |
|
hypothetical protein |
NC_021215 (Helicobacter pylori UM032) |
2e-120 |
98 |
|
hypothetical protein |
NC_021882 (Helicobacter pylori UM298) |
2e-120 |
98 |
|
hypothetical protein |
NC_021216 (Helicobacter pylori UM299) |
2e-120 |
98 |
|
integrase/recombinase |
NC_017365 (Helicobacter pylori F30) |
1e-119 |
97 |
|
integrase/recombinase |
NC_017367 (Helicobacter pylori F57) |
2e-115 |
97 |
|
integrase/recombinase (xerD) |
NC_017362 (Helicobacter pylori Lithuania75) |
1e-101 |
64 |
|
integrase/recombinase (xerD) |
NC_017372 (Helicobacter pylori India7) |
2e-101 |
64 |
|
integrase |
NC_021218 (Helicobacter pylori UM066) |
3e-101 |
64 |
|
integrase/recombinase |
NC_020508 (Helicobacter pylori OK113) |
1e-100 |
64 |
|
integrase/recombinase (xerD) |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
6e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_017735 (Helicobacter cetorum MIT 99-5656) |
6e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_014560 (Helicobacter pylori SJM180) |
6e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_000915 (Helicobacter pylori 26695) |
7e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_018939 (Helicobacter pylori 26695) |
7e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_018937 (Helicobacter pylori Rif1) |
7e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_018938 (Helicobacter pylori Rif2) |
7e-101 |
63 |
|
integrase/recombinase |
NC_020509 (Helicobacter pylori OK310) |
8e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_017063 (Helicobacter pylori ELS37) |
9e-101 |
63 |
|
integrase/recombinase (xerD) |
NC_019560 (Helicobacter pylori Aklavik117) |
1e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_017741 (Helicobacter pylori Shi112) |
1e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_017739 (Helicobacter pylori Shi417) |
2e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_017371 (Helicobacter pylori Gambia94/24) |
2e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_017742 (Helicobacter pylori PeCan18) |
2e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_017737 (Helicobacter cetorum MIT 00-7128) |
3e-100 |
64 |
|
hypothetical protein |
NC_014256 (Helicobacter pylori B8) |
5e-100 |
63 |
|
integrase/recombinase (xerD) |
NC_014555 (Helicobacter pylori PeCan4) |
2e-98 |
63 |
|
integrase |
NC_021217 (Helicobacter pylori UM037) |
2e-98 |
63 |
|
phage integrase family protein |
NC_022130 (Helicobacter pylori SouthAfrica20) |
2e-89 |
57 |
|
integrase-recombinase protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
5e-89 |
57 |
|
integrase/recombinase |
NC_017375 (Helicobacter pylori 83) |
8e-89 |
57 |
|
integrase-recombinase protein |
NC_011333 (Helicobacter pylori G27) |
1e-88 |
57 |
|
integrase |
NC_021218 (Helicobacter pylori UM066) |
2e-88 |
56 |
|
integrase/recombinase |
NC_017375 (Helicobacter pylori 83) |
4e-88 |
61 |
|
integrase/recombinase (xerD) |
NC_017358 (Helicobacter pylori Cuz20) |
5e-88 |
56 |
|
integrase/recombinase |
NC_017367 (Helicobacter pylori F57) |
5e-88 |
56 |
|
integrase/recombinase XerD |
NC_017741 (Helicobacter pylori Shi112) |
9e-88 |
56 |
|
integrase/recombinase XerD |
NC_017740 (Helicobacter pylori Shi169) |
9e-88 |
56 |
|
integrase/recombinase XerD |
NC_017739 (Helicobacter pylori Shi417) |
9e-88 |
56 |
|
integrase/recombinase XerD |
NC_010698 (Helicobacter pylori Shi470) |
9e-88 |
56 |
|
integrase-recombinase protein |
NC_019560 (Helicobacter pylori Aklavik117) |
1e-87 |
56 |
|
integrase/recombinase |
NC_020508 (Helicobacter pylori OK113) |
1e-61 |
54 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc