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Homologs of tnpA gene of NC_010611_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) tnpA
( YP_001844879.1 )

putative transposase

NC_010611
(Acinetobacter baumannii ACICU)

6e-15

100

2) ACICU_01139
( YP_001845798.1 )

putative transposase

NC_010611
(Acinetobacter baumannii ACICU)

6e-15

100

3) KPN_pKPN5p08162
( YP_001338772.1 )

putative transposase

NC_009651
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

6e-15

100

4) p1ECUMN_0048
( YP_002405948.1 )

transposase IS26 fragment

NC_011749
(Escherichia coli UMN026)

7e-10

5) YPTS_3505
( YP_001873915.1 )

hypothetical protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

5e-09

6) YPK_0690
( YP_001719444.1 )

hypothetical protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

5e-09

• Sequence Alignments

1) tnpA in NC_010611


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 43/43 (100%), Positives = 43/43 (100%), Gaps = 0/43 (0%)

Query  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43
           MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sbjct  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43

2) ACICU_01139 in NC_010611


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 43/43 (100%), Positives = 43/43 (100%), Gaps = 0/43 (0%)

Query  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43
           MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sbjct  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43

3) KPN_pKPN5p08162 in NC_009651


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 74.2 bits (262),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 43/43 (100%), Positives = 43/43 (100%), Gaps = 0/43 (0%)

Query  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43
           MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sbjct  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43

4) p1ECUMN_0048 in NC_011749


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 57.4 bits (198),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 34/38 (90%), Positives = 35/38 (93%), Gaps = 1/38 (2%)

Query  13  IIRGFIRVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  50
            I+G I VMRALRKGQASAFYYGDPLGEMRLVSRVFEM
Sbjct  7   TIKG-IEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43

5) YPTS_3505 in NC_010634


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 54.7 bits (188),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 30/43 (70%), Positives = 37/43 (87%), Gaps = 0/43 (0%)

Query  7   IKTAYATIKGIEVMHALRKGQAKPWYYGHPQGEVRLRNYVFSL  49
           +KTAYATIKGIEVM+ALRKGQA + YYG+P GE+RL + VF +
Sbjct  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43

6) YPK_0690 in NC_010465


> NC_010611_R1|1|G1|184156540|YP_001844879.1|Acinetobacter_baumannii_ACICU|+|1..132|tnpA|ACICU_00220|putative 
transposase
Length=43

 Score = 54.7 bits (188),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 30/43 (70%), Positives = 37/43 (87%), Gaps = 0/43 (0%)

Query  7   IKTAYATIKGIEVMHALRKGQAKPWYYGHPQGEVRLRNYVFSL  49
           +KTAYATIKGIEVM+ALRKGQA + YYG+P GE+RL + VF +
Sbjct  1   MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM  43