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PAthogenisity Island DataBase (PAI DB)

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Homologs of virB2 gene of NC_010161_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) virB2
( YP_001609998.1 )

VirB2 protein

NC_010161
(Bartonella tribocorum CIP 105476)

1e-28

100

2) virB2
( YP_002972357.1 )

VirB2 protein

NC_012846
(Bartonella grahamii as4aup)

1e-22

3) virB2
( YP_034051.1 )

virB2 protein

NC_005956
(Bartonella henselae Houston-1)

5e-22

4) virB2
( YP_007463087.1 )

type IV secretion system protein VirB2

NC_020301
(Bartonella vinsonii Winnie)

2e-19

5) RM11_0974
( YP_006665395.1 )

virB2 protein

NC_018533
(Bartonella quintana RM-11)

4e-15

• Sequence Alignments

1) virB2 in NC_010161


> NC_010161_P1|1|G1|163868774|YP_001609998.1|Bartonella_tribocorum_CIP_105476|+|1..321|virB2|Btr_1689|VirB2 
protein
Length=106

 Score =  119 bits (436),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  1    MTDNRFQNIIFIVTMLLFTAVFISDFSYAAPAAnggglgnldgvlgnIVTMMTGGTARLi  60
            MTDNRFQNIIFIVTMLLFTAVFISDFSYAAPAANGGGLGNLDGVLGNIVTMMTGGTARLI
Sbjct  1    MTDNRFQNIIFIVTMLLFTAVFISDFSYAAPAANGGGLGNLDGVLGNIVTMMTGGTARLI  60

Query  61   aiicvaavgigWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106
            AIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT
Sbjct  61   AIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106

2) virB2 in NC_012846


> NC_010161_P1|1|G1|163868774|YP_001609998.1|Bartonella_tribocorum_CIP_105476|+|1..321|virB2|Btr_1689|VirB2 
protein
Length=106

 Score =   99 bits (360),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 89/108 (83%), Positives = 101/108 (94%), Gaps = 2/108 (1%)

Query  1    MTDNRSQNIIFIVIMTMLLFTALLVSDPSYAAPVADGSGFAKLEGVLGNIVTMMTGPTAK  60
            MTDNR QNIIFIV  TMLLFTA+++SD SYAAP A+G+G+++L+GVLGNIVTMMTG TA+
Sbjct  1    MTDNRFQNIIFIV--TMLLFTAVFISDFSYAAPAANGGGLGNLDGVLGNIVTMMTGGTAR  58

Query  61   LiaiicvaavgigWMYGFIDLRKAAYCVLGIAIVFGAPTLVGKLASTA  108
            LIAIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLV KLA+T+
Sbjct  59   LIAIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106

3) virB2 in NC_005956


> NC_010161_P1|1|G1|163868774|YP_001609998.1|Bartonella_tribocorum_CIP_105476|+|1..321|virB2|Btr_1689|VirB2 
protein
Length=106

 Score = 97.5 bits (351),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 70/107 (66%), Positives = 94/107 (88%), Gaps = 1/107 (0%)

Query  1    MTDTISRNIIFIIIMLLLTALVVSDPsyaaaatgsasglgNVDNVLQSIVTMMTGTTAKL  60
            MTD   +NIIFI+ MLL+TA+ +SD    AA++++++GLGN+D VL +IVTMMTG TA+L
Sbjct  1    MTDNRFQNIIFIVTMLLFTAVFISD-FSYAAPAANGGGLGNLDGVLGNIVTMMTGGTARL  59

Query  61   IATICVAAVGIGWMYGFIDLRKAAYCLIGIGIVFGASALVSKLTSAS  107
            IA ICVAAVGIGWMYGFIDLRKAAYC++GI+IVFGA++LV+KL++++
Sbjct  60   IAIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106

4) virB2 in NC_020301


> NC_010161_P1|1|G1|163868774|YP_001609998.1|Bartonella_tribocorum_CIP_105476|+|1..321|virB2|Btr_1689|VirB2 
protein
Length=106

 Score = 88.9 bits (318),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 75/108 (70%), Positives = 92/108 (86%), Gaps = 2/108 (1%)

Query  1    MIDNISRNIIFVVIMLLLTALVVLDPSYAASTAASGANSLGNVDNVLQSIVTMMTGNTAR  60
            M DN  +NIIF+V MLL+TA+ + D SYAA++A +G+ +  N+D VL +IVTMMTG TAR
Sbjct  1    MTDNRFQNIIFIVTMLLFTAVFISDFSYAAPAANGGGLG--NLDGVLGNIVTMMTGGTAR  58

Query  61   LiaiicvaavgigWMYGFIDLRKAAYCIIGIGIVFGAPALVGKLVGST  108
            LIAIICVAAVGIGWMYGFIDLRKAAYC++GI+IVFGAP+LV KL G+T
Sbjct  59   LIAIICVAAVGIGWMYGFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106

5) RM11_0974 in NC_018533


> NC_010161_P1|1|G1|163868774|YP_001609998.1|Bartonella_tribocorum_CIP_105476|+|1..321|virB2|Btr_1689|VirB2 
protein
Length=106

 Score = 74.7 bits (264),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 62/92 (68%), Positives = 78/92 (85%), Gaps = 2/92 (2%)

Query  1    MLLLTALIVSNPSYAASSTSGLGNVDSVLQ--NIVTMMTGTTAKLiaiicvaavgigWMS  58
            MLL+TA+++S+ SYAA++++G G  +      NIVTMMTG TA+LIAIICVAAVGIGWM 
Sbjct  15   MLLFTAVFISDFSYAAPAANGGGLGNLDGVLGNIVTMMTGGTARLIAIICVAAVGIGWMY  74

Query  59   GFIDLRKAAYCILGIGIVFGAPTLVSTLMGSS  90
            GFIDLRKAAYC+LGI+IVFGAPTLV+ L G++
Sbjct  75   GFIDLRKAAYCVLGIAIVFGAPTLVTKLAGTT  106