> NC_009457_P2|1|G1|147673063|YP_001217005.1|Vibrio_cholerae_O395|+|1..7947|-|VC0395_A1059|RTX
protein
Length=2648
Score = 1928 bits (7323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1140/2129 (54%), Positives = 1643/2129 (78%), Gaps = 78/2129 (3%)
Query 872 NLHALSGSENI--RQELENTSPLISA--EQKL---------NIVFSEQETGFLLTQ-ASD 917
+LHAL+ + N+ ++ EN +++I++ ++ L N++ E + GF + ++
Sbjct 533 ELHALGETSNLENNKQQENVASIINTMLNDMLPFYALRTERNLLVQEGDEGFEVRAWPGT 592
Query 918 ETNEKFIYIKNGDNQEQQKIMSNFILTHYRDFDSIPEQLYFLDNTIVSLDKNHSRILSEK 977
E + K I + + ++ Q+K + FIL+++ +F+ +P++L+++DN ++S + ++++L++K
Sbjct 593 EDKSKTIILEDPEDAAQHKAIERFILANFDNFEQMPDELFLVDNKVISHHEGRTHVLAQK 652
Query 978 VGENWQPVAYSNLMTADELTSAAEVTGKARGENYKAIIQSLRDYELQSTNTNNTPIDIFQ 1037
V+ WQ A +LM+ EL AA+VTGK RGE+Y+ +I++L DY+ T+ + + +
Sbjct 653 VDGAWQYNATVELMSVTELLDAANVTGKIRGESYQQVIDALTDYHASITEHADYEPESVE 712
Query 1038 QLSTLRIQINSYLLKHPDSKRNEALQQLRDQVDIRYKHASILLSNSQQVDSNNTFSYLYE 1097
+L LR +I++Y+L HPDS R EA++ L +QV+ R + S+L Q ++++N+FS LY+
Sbjct 713 KLLNLRKKIEGYVLGHPDSGRVEAMNSLLNQVNTRLDEVSLLSVAEQTIQAQNSFSRLYD 772
Query 1098 IFSNANLKINKHIYLDENGNFVTKGKNNLQNQDKLISGKNAITSIKRLVEKEYGSEITNQ 1157
+ ANLK +KH+YLD+NG+FVTKGK NL N D L S + +K V +EYG +++
Sbjct 773 QLEAANLKESKHLYLDQNGDFVTKGKGNLANIDLLGSREAVLEKVKLTVSNEYGQTVADT 832
Query 1158 VFNQFTENEFAQNGHGIDLSGLKKIHQAIEQQVSPISSTLYIWKPSKHSRLGHAALQIGS 1217
+F ++ +++A++G G+D++GL+K+HQAIEQ++SP+S+TLYIWKPS HS LGHAALQIG
Sbjct 833 IFAGLSAKDLAKDGKGVDIAGLNKVHQAIEQHLSPVSATLYIWKPSDHSALGHAALQIGQ 892
Query 1218 GRLQLDSDSVQDNHDDNYVSWWPAGSKS--LVNPLNITTEENPDLKLRWYDLSQPVSRST 1275
GR QL++++ D +++NYVSWWP GSKS + N LN++T ++PDLKLRW D+SQP ++
Sbjct 893 GRTQLEGQAAADFNQQNYVSWWPLGSKSSNISNILNVATKDQPDLKLRWSDFSQPAHQND 952
Query 1276 NFMTLQIDIQEEEKTNFKLNKNEGKNDRQLKEFRDKTNLTRGLE----NITPKIAGLLLK 1331
TL+ D+ EE+ F L+ + K LK F +K N ++G++ + + A++LL
Sbjct 953 ---TLEHDVASEENDGFGLHDGDIK----LKRFIEKLNAAKGIDASFKEASEGYASVLLG 1005
Query 1332 VPHWISETHIPPEISHPFIKQWNSPNSNLLEVSTNFSIAVKNWLKVAFPTAMINQTFALe 1391
P+ + T IP+++ +PF+ QWN + ++++V+ F+ ++ + + ++++ ++
Sbjct 1006 NPDMLETTGIPAHVFQPFVEQWNDTSYDMMDVAHRFAQELRLQAQRSDDPELLEKRIG-- 1063
Query 1392 ikkikeieDRKTENFKTSVADDTNDGVVFRINLEGLDAAAMQKEWKRINSQSDPRYQLLT 1451
+ I+++ +R E++ T A ++++G VFRINLEGLD AAMQ EW R+++++D+RYQLLT
Sbjct 1064 -NVIRQFAERALEEIETFKASQADQGRVFRINLEGLDVAAMQAEWHRLSNDPDARYQLLT 1122
Query 1452 KNCSSIVARILKAGGADQLIGHHWKPRFGIWTPNELYKFSQKIQEARLAQIAVQQGKPIH 1511
KNCSS VA++LKAGGAD+LIGH W P+FG+WTP EL++F+Q +QEA+L A +Q+ +
Sbjct 1123 KNCSSTVAKVLKAGGADKLIGHTWLPKFGVWTPTELFNFGQALQEAQLEIAAKKQSHQVT 1182
Query 1512 SNLQALSDHNK----VAIDNDGTSPNERKNLSPLTRFFNDHFFGSYERRRDMTTVMRI-- 1565
L+ALS+++K VAI+NDGT+P ++ +LSPLTRF+N++++G E RR + + +
Sbjct 1183 DVLDALSGNEKPKENVAIENDGTPPRDKESLSPLTRFLNNELYGDKEARRKIGEITQTLL 1242
Query 1566 ------KNEEKITLKGDAGRLTGSYYRG---NDNIPEATDKKVVLFLHGSNSPTEKQSSS 1616
+ +KITL+G+AGRLTG Y +G ++ + KVVLFLHGS S++E Q+S+
Sbjct 1243 DHAVEKGESQKITLQGEAGRLTGYYHQGTAPSEGETSSPSGKVVLFLHGSGSSAEEQASA 1302
Query 1617 FYHYYNQQGIDMLAINMRGFGESDGSPTEQGMYADAQTMFRYLVNDKGIDPKNIIIHGYS 1676
+ + Y++QGIDMLA+N+RG+GESDG+P+E+G+Y DA+TMF YLVNDKGIDP NIIIHGYS
Sbjct 1303 IRNHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDKGIDPSNIIIHGYS 1362
Query 1677 MGAPIAAKLASDISANGQHIAGLFLDRPMPSMSKAIESYDEYSLKKLTGQLAKKINGQFS 1736
MG+PIAA LA + NGQ ++GL+LDRPMPSM+KAI + + + + G +AK +NGQFS
Sbjct 1363 MGGPIAADLARYAAQNGQAVSGLLLDRPMPSMTKAITAHEVANPAGIVGAIAKAVNGQFS 1422
Query 1737 VEKNLQGFSKDIPIILLTDCGELGIGGEKMRTKLLDKGYLVKGERTDVSHLESLKLMNQY 1796
VEKNL+G++K+ +I+LLTD LG GEK+RTKL GY V GE+T +H S +LM+QY
Sbjct 1423 VEKNLEGLPKETSILLLTDNEGLGNEGEKLRTKLTASGYNVTGEQTFYGHEASNRLMSQY 1482
Query 1797 GKQIISSLLSPEYVNNTNHRNALDSIQNP-------------------------IKKNKV 1831
+ QI+S+L S+ V++ ++++LD+ + +++V
Sbjct 1483 ADQIVSGLSSSASVDEDLDQQGLDTTSTKDQGISNKNDHLQVVDSKEALADGKILHNQNV 1542
Query 1832 TDWGMVYVKPNDNGGDSRFDSQIIIQTEDDPIVaqaasalaakhaKNSIVVQLDADGHYR 1891
WG + V P +GG++RFD+QII+Q E+DP+VA+AA+ LA+KHA +S+VVQLD+DG+YR
Sbjct 1543 NSWGPITVTPTTDGGETRFDGQIIVQMENDPVVAKAAANLAGKHAESSVVVQLDSDGNYR 1602
Query 1892 VAYGDPAQLSGKIRWQLVGHGRETTENNHLRLSNYNADELSNQLVKFNTVFSKENNINTT 1951
V YGDP++L GK+RWQLVGHGR+ +E N+ RLS Y+ADEL+ +L KF+ F++ +NIN
Sbjct 1603 VVYGDPSKLDGKLRWQLVGHGRDHSETNNTRLSGYSADELAVKLAKFQQSFNQAENINNK 1662
Query 1952 PEHISIVGCSLISNDKQAGFAHQFINALDQQGIRSSVSARVTEVAVDSNGHKYTKDNNGE 2011
P+HISIVGCSL+S+DKQ GF+HQFINA+D +G+R VS R +E+AVD G+K TKD NG+
Sbjct 1663 PDHISIVGCSLVSDDKQKGFGHQFINAMDANGLRVDVSVRSSELAVDEAGRKHTKDANGD 1722
Query 2012 WVAKQTQNKVVLDWNNEGKITTEFEQIHNGVAEGDIDLTKVGASA-DNKVRGAIADNNEV 2070
WV K +NKV L W+ +G + + E+I+NG+AEGDIDL+++G + D+ RGAI+DNN+V
Sbjct 1723 WVQKAENNKVSLSWDAQGEVVAKDERIRNGIAEGDIDLSRIGVNNVDEPARGAIGDNNDV 1782
Query 2071 FTAPkkgkkstkqsssgsdnsslsysgNIQVSVGDGEFTTVNWGTSNLGIKVGTGGFKSL 2130
F AP K K T +++S ++ +SYSGNIQV+VG+GEFT+VNWGTSN+GIKVGTGGFKSL
Sbjct 1783 FDAPEKRKPETEVIANSSSSNQFSYSGNIQVNVGEGEFTAVNWGTSNVGIKVGTGGFKSL 1842
Query 2131 VFGDNNVMVHVGNGDSKHSVDIAGYQAFEGMQLFVGTRNVSFNLGRSNDLIVMLEKSIPT 2190
FGDNNVMVH+G+G+SKHSVDI+GYQA+EG Q+F+G RNVSFN+G+SNDLI+M++KSIPT
Sbjct 1843 AFGDNNVMVHIGDGESKHSVDIGGYQALEGAQMFLGNRNVSFNFGHSNDLILMMDKSIPT 1902
Query 2191 PPLINPFDGAARITKVLESIACSGENNDNDWLSVQNDQWTLAGAKKFAIDMSGIDQTSNV 2250
PPL+NPFDGAARI+ VL++IA SGE +D WL+ Q++QWTL+GAKKF DMSG+DQ+S+V
Sbjct 1903 PPLVNPFDGAARISGVLQGIATSGEGED--WLAAQEQQWTLSGAKKFVKDMSGLDQSSSV 1960
Query 2251 DYKTLTDLNSQNKRSSRGLKSDLEATLNKKYNQWLGGSGNNNEMGKISRAEQFRQLDSKI 2310
DY TL +L+SQN R SRGLK D EATLNK+YNQWL+G+GN+ +++SRA+++RQ + K+
Sbjct 1961 DYTTLVELDSQNERDSRGLKHDAEATLNKQYNQWLSGNGNSG-TSQLSRADKLRQANEKL 2019
Query 2311 AFNFAIGGQGADIQVTAGNWNLMFGDNIQSIIDTNLGSLFGLMTQQFTATGMVETTFTYT 2370
AFNFA+GGQGADIQVT+GNWN+MFGDNIQSI+DTNLGSLFGLMTQQFTATG TTFTYT
Sbjct 2020 AFNFAVGGQGADIQVTTGNWNFMFGDNIQSILDTNLGSLFGLMTQQFTATGQAKTTFTYT 2079
Query 2371 PQNLPTKLKNKLLGRLASVSSDTTLGDIFGVDSTTDGKIISRNGEPIDVVAILKDMLAVV 2430
PQ+LP +LKNKLLG+LA+V+++TTL+DIFGVD T+ G+I+SRNG+++D VAILK+ML V+
Sbjct 2080 PQDLPRQLKNKLLGQLAGVGAETTLADIFGVDYTASGQIVSRNGQAVDGVAILKEMLEVI 2139
Query 2431 TEFGGEKLSAFIDPTKLLDNLQSSINLGKDGIISFAESHGLKEKATEDQQNESEVSINAQ 2490
EF+G++L AF+DP+KLLD+L+++I++G DGI SFAE+HGLKEKA E+++++S VS+N+
Sbjct 2140 GEFSGDQLQAFVDPAKLLDSLKAGIDMGADGIKSFAETHGLKEKAPEEEKDNSSVSVNGA 2199
Query 2491 ----TPITTSQTENSKITEENDRPFGFNSLNIPNLFATIFNKDKQTDMRDLAENLKENLA 2546
+ +T N+ +E +DR+FGFNSLN+PNLFATIF++DKQ +M+ L ENLK+NL+
Sbjct 2200 NVNSAQGATVADGNTETAETQDRAFGFNSLNLPNLFATIFSQDKQKEMKSLVENLKQNLT 2259
Query 2547 ADLLNMEKKTLDFLRNNGHLKGDGDIHVSLGNYNFNWGGDGNDLGAYLGDNNNFWGGRGS 2606
ADLLNM KT+DFLRN+GHL+GDGDI++SLGNYNFNWGGDG+DLGAYLGDNNNFWGGRG
Sbjct 2260 ADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGD 2319
Query 2607 DTFYATGISNIFTGGYGNDLGVLMGRSNMMFggdgddTAIIAGRINNVYLGDGLDKAFVF 2666
D FYATG SNIFTGG GND+GVLMGR NMMFGGDG+DTA++AGRIN+V+LG G D++FVF
Sbjct 2320 DVFYATGKSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDDQSFVF 2379
Query 2667 GEGGEIHTNAGNDYAVTTGNYNRIFSGSEQDFVVTIGNHNQISLEEGNDFAKIFGNYNRL 2726
GEGGEI+T +G DY VT+GN+NR+ +G +QD+ VTIGN+NQ+ L GNDFA+IFGNYNR+
Sbjct 2380 GEGGEIDTGSGRDYVVTSGNFNRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRI 2439
Query 2727 NGGGGDDEIQLMGYHAVVDGGDGNDQLIAASFSKFSLLNGNTGNDIIILGGYQNHFKGGN 2786
N+G+G+D ++LMGYHAV++GGDG+D+LIA+++SKFS +NG G D+++LGGYQN FKGG
Sbjct 2440 NAGAGNDVVKLMGYHAVLNGGDGDDHLIATAISKFSQFNGGEGRDLMVLGGYQNTFKGGT 2499
Query 2787 GIDSFLINNNVIDCYIDDISQEDNIVLGGIDWNKLWFERSGYDLKISHIRFPQNTGEQAT 2846
++DSF+++ +VID ++DI EDNIV+ GIDW+KLWFERSGYDLK+S +R P N ++Q+
Sbjct 2500 DVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDLKLSILRDPSNDSDQSK 2559
Query 2847 FEHIGSTTFTDYFNGNQAKIVIAMTDKDHSDQREYTALSSNALAIQIQAMSTFPMKAGAS 2906
FEHIGS TF+DYFNGN+A++VI+M++KD S++REYT LS +A+ +QAMS F +AG +
Sbjct 2560 FEHIGSVTFSDYFNGNRAQVVIGMSEKDLSGEREYTMLSDSAIDALVQAMSGFEPQAGDN 2619
Query 2907 GFFDNISDEAKQMIAVAWTDTISGKGILV 2935
GF+D++ ++ I++AW+D + KG++V
Sbjct 2620 GFIDSLESKSQAAISMAWSDVVHKKGLMV 2648
Score = 446 bits (1680), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 269/644 (42%), Positives = 426/644 (67%), Gaps = 46/644 (7%)
Query 247 KNIYLDNINDPTQQKIIEHFILANYSNFEAMPNELHLENDKIKSSHNNKDRILAEYVEHK 306
K I L++ +D++Q+K IE+FILAN+ NFE MP+EL L ++K+ S H+ + ++LA+ V+
Sbjct 597 KTIILEDPEDAAQHKAIERFILANFDNFEQMPDELFLVDNKVISHHEGRTHVLAQKVDGA 656
Query 307 WQMLTDSKVMSVDELHKVASVKGKIQGESYKSIITTLSEYHEKESNTNCLPIEKLRVLAQ 366
WQ + +MSV EL A+V GKI+GESY+ +I +L++YH ++ E + L +
Sbjct 657 WQYNATVELMSVTELLDAANVTGKIRGESYQQVIDALTDYHASITEHADYEPESVEKLLN 716
Query 367 LRNQIDSYLLGHPDSERNDGLKQLQTQVNTRYKHASALIQDSHTINADSSFSRLYDSLSN 426
LR++I++Y+LGHPDS R ++++ L QVNTR + S L +TI+A++SFSRLYD L
Sbjct 717 LRKKIEGYVLGHPDSGRVEAMNSLLNQVNTRLDEVSLLSVAEQTIQAQNSFSRLYDQLEA 776
Query 427 ANLKRSKHIYIDINGHFVTEGKNNLQGKNRLTSGKEVIERVKNAVEKEYGAPIANKVFSQ 486
ANLK SKH+Y+D NG+FVT GK NL + L S V+E+VK +V +EYG +A+ +F+
Sbjct 777 ANLKESKHLYLDQNGDFVTKGKGNLANIDLLGSREAVLEKVKLTVSNEYGQTVADTIFAG 836
Query 487 FANNEFAENGEGIDVSGLKKIHRAIERELSPHSATLYIWKPSNHSNLEHATLQIGQGRLL 546
++ +++A +G G+D++GL+K+H+AIE++LSP SATLYIWKPS+HS L HA+LQIGQGR
Sbjct 837 LSAKDLAKDGKGVDIAGLNKVHQAIEQHLSPVSATLYIWKPSDHSALGHAALQIGQGRTQ 896
Query 547 LNTEDAQNNHKENYISWWPNKAKSYFDVMGVPSQLKESLASDVAAEENDGFGLNYK-YKQ 605
L+ + A + +++NY+SWWP +KS S++ + L +VA+ ++ ++ L + Q
Sbjct 897 LEGQAAADFNQQNYVSWWPLGSKS--------SNISNIL--NVATKDQPDLKLRWSDFSQ 946
Query 606 LNRYDRLMNIAKGETVSTADDLSLADAKNILMIPNYIENSNIPRTIGQPFIDEWVITQKK 665
+ + + + + D+++L D+ + + +IE+ N ++ I+ +F
Sbjct 947 PAHQND--TLEHDVASEENDGFGLHDGD--IKLKRFIEKLNAAKGIDASF---------- 992
Query 666 LNNIATNFLEAVQGKFSGNTITINGAMILLTEPTLLSKRKIPLSVAQPFIEQWDNIKTQQ 725
++ + + A +LL +P +L IP V QPF+EQW++ +
Sbjct 993 -KEASEGY-----------------ASVLLGNPDMLETTGIPAHVFQPFVEQWNDTSYDM 1034
Query 726 EDISIQLLKAMKTWIQEGKDPTLTKKRIALVENEFAEQKQKSIDRFKTSLPDEGRVFRIN 785
D++ ++ + ++ Q + DP L KRI+ V +FAE+ I+ FK+S +D+GRVFRIN
Sbjct 1035 MDVAHRFAQELRLQAQRSDDPELLEKRIGNVIRQFAERALEEIETFKASQADQGRVFRIN 1094
Query 786 LEGLDVAAMQAEWQRIKNSPNGRYHLLTQNCSSIVAKVLKAGGADELIGYNWQPKYNIWT 845
LEGLDVAAMQAEW+R+ N P++RY+LLT+NCSS VAKVLKAGGAD LIG W PK+ +WT
Sbjct 1095 LEGLDVAAMQAEWHRLSNDPDARYQLLTKNCSSTVAKVLKAGGADKLIGHTWLPKFGVWT 1154
Query 846 PNQMFAFAQELQEAQM---ARQQSRMIPPNLHALSGSENIRQEL 886
P ++F F+Q LQEAQ+ A++QS+ + L+ALSG+E+ ++++
Sbjct 1155 PTELFNFGQALQEAQLEIAAKKQSHQVTDVLDALSGNEKPKENV 1198 |