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PAthogenisity Island DataBase (PAI DB)

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Homologs of tnp gene of NC_003923_P5

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) tnp
( NP_646562.1 )

putative transposase

NC_003923
(Staphylococcus aureus MW2)

3e-26

100

2) SAVC_08250
( YP_005291243.1 )

IS3 family transposase

NC_016912
(Staphylococcus aureus VC40)

3e-26

100

3) SA2981_1760
( YP_005742509.1 )

truncated transposase

NC_017340
(Staphylococcus aureus 04-02981)

4e-23

4) SAHV_1790
( YP_001442380.1 )

transposase

NC_009782
(Staphylococcus aureus Mu3)

4e-23

5) SAV1805
( NP_372329.1 )

transposase

NC_002758
(Staphylococcus aureus Mu50)

4e-23

6) SaurJH9_1855
( YP_001247219.1 )

hypothetical protein

NC_009487
(Staphylococcus aureus JH9)

6e-23

• Sequence Alignments

1) tnp in NC_003923


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60
           MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  61  VSGQKIGRS  69
           VSGQKIGRS
Sbjct  61  VSGQKIGRS  69

2) SAVC_08250 in NC_016912


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)

Query  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60
           MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  61  VSGQKIGRS  69
           VSGQKIGRS
Sbjct  61  VSGQKIGRS  69

3) SA2981_1760 in NC_017340


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 62/68 (92%), Positives = 65/68 (96%), Gaps = 0/68 (0%)

Query  16  MCKVLKIPRSTYYDSIKRKDNKITKDDSNVERAAINIFNSNRKVFSTRRIKNHLNDKGLT  75
           MCKVL I RSTYYDSIKRKDNKITKDDSN+E+A INIFNSNRKVF+TRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  76  VSGQKIGR  83
           VSGQKIGR
Sbjct  61  VSGQKIGR  68

4) SAHV_1790 in NC_009782


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 62/68 (92%), Positives = 65/68 (96%), Gaps = 0/68 (0%)

Query  16  MCKVLKIPRSTYYDSIKRKDNKITKDDSNVERAAINIFNSNRKVFSTRRIKNHLNDKGLT  75
           MCKVL I RSTYYDSIKRKDNKITKDDSN+E+A INIFNSNRKVF+TRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  76  VSGQKIGR  83
           VSGQKIGR
Sbjct  61  VSGQKIGR  68

5) SAV1805 in NC_002758


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  101 bits (366),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 62/68 (92%), Positives = 65/68 (96%), Gaps = 0/68 (0%)

Query  16  MCKVLKIPRSTYYDSIKRKDNKITKDDSNVERAAINIFNSNRKVFSTRRIKNHLNDKGLT  75
           MCKVL I RSTYYDSIKRKDNKITKDDSN+E+A INIFNSNRKVF+TRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  76  VSGQKIGR  83
           VSGQKIGR
Sbjct  61  VSGQKIGR  68

6) SaurJH9_1855 in NC_009487


> NC_003923_P5|1|G1|21283474|NP_646562.1|Staphylococcus_aureus_subsp._aureus_MW2|-|1..210|tnp|MW1745|putative 
transposase
Length=69

 Score =  100 bits (363),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 62/68 (92%), Positives = 65/68 (96%), Gaps = 0/68 (0%)

Query  1   MCKVLKIPRSTYYDSIKRKDNKITKDDSNVERAAINIFNSNRKVFSTRRIKNHLNDKGLT  60
           MCKVL I RSTYYDSIKRKDNKITKDDSN+E+A INIFNSNRKVF+TRRIKNHLNDKGLT
Sbjct  1   MCKVLIILRSTYYDSIKRKDNKITKDDSNIEHAVINIFNSNRKVFGTRRIKNHLNDKGLT  60

Query  61  VSGQKIGR  68
           VSGQKIGR
Sbjct  61  VSGQKIGR  68