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Homologs of YPO0335 gene of NC_003143_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YP_0490
( NP_991883.1 )

hypothetical protein

NC_005810
(Yersinia pestis 91001)

4e-35

100

2) YPA_3946
( YP_653852.1 )

hypothetical protein

NC_008150
(Yersinia pestis Antiqua)

4e-35

100

3) YPO0335
( YP_002345415.1 )

hypothetical protein

NC_003143
(Yersinia pestis CO92)

4e-35

100

4) YPC_0667
( YP_005622657.1 )

hypothetical protein

NC_017265
(Yersinia pestis Harbin 35)

4e-35

100

5) y0594
( NP_667931.1 )

hypothetical protein

NC_004088
(Yersinia pestis KIM)

4e-35

100

6) YPN_3334
( YP_649261.1 )

hypothetical protein

NC_008149
(Yersinia pestis Nepal516)

4e-35

100

7) YPK_3839
( YP_001722557.1 )

hypothetical protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

4e-35

100

8) YPTB0389
( YP_068934.1 )

hypothetical protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

6e-33

9) YPTS_0414
( YP_001870860.1 )

hypothetical protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

6e-33

10) YPDSF_3636
( YP_001164959.1 )

hypothetical protein

NC_009381
(Yersinia pestis Pestoides F)

2e-29

• Sequence Alignments

1) YPA_3946 in NC_008150


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

2) YPC_0667 in NC_017265


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

3) YP_0490 in NC_005810


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

4) YPO0335 in NC_003143


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

5) y0594 in NC_004088


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

6) YPN_3334 in NC_008149


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

7) YPK_3839 in NC_010465


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  141 bits (517),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88

8) YPTB0389 in NC_006155


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 88/96 (92%), Positives = 88/96 (92%), Gaps = 8/96 (8%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINSVVDLKIN  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKIS        SVVDLKIN
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKIS--------SVVDLKIN  52

Query  61  KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS  96
           KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  53  KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS  88

9) YPTS_0414 in NC_010634


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  134 bits (490),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 88/96 (92%), Positives = 88/96 (92%), Gaps = 8/96 (8%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINSVVDLKIN  60
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKIS        SVVDLKIN
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKIS--------SVVDLKIN  52

Query  61  KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS  96
           KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  53  KRLGINELPHLNRINAVQKGSRLLASRSNLGISLLS  88

10) YPDSF_3636 in NC_009381


> NC_003143_P2|1|G1|218927540|YP_002345415.1|Yersinia_pestis_CO92|+|1..267|-|YPO0335|hypothetical 
protein
Length=88

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 80/88 (91%), Positives = 80/88 (91%), Gaps = 8/88 (9%)

Query  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSL--------SVVDLKINKRLGINEL  52
           MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSL        SVVDLKINKRLGINEL
Sbjct  1   MMMITKWHSGGRLTGFMALTAVSQQKLRCPCSSLSLSVVDLKISSVVDLKINKRLGINEL  60

Query  53  PHLNRINAVQKGSRLLASRSNLGISLLS  80
           PHLNRINAVQKGSRLLASRSNLGISLLS
Sbjct  61  PHLNRINAVQKGSRLLASRSNLGISLLS  88