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Homologs of SAV0783 gene of NC_002758_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAHV_0779
( YP_001441369.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

3e-165

100

2) SAV0783
( NP_371307.1 )

integrase

NC_002758
(Staphylococcus aureus Mu50)

3e-165

100

3) int
( NP_645562.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

2e-164

4) SPSINT_0497
( YP_004148662.1 )

integrase

NC_014925
(Staphylococcus pseudintermedius HKU10-03)

3e-163

5) ispD_1
( YP_005752082.1 )

Integrase

NC_017347
(Staphylococcus aureus T0131)

1e-160

6) int
( YP_254017.1 )

integrase

NC_007168
(Staphylococcus haemolyticus JCSC1435)

1e-139

7) HD73_5296
( YP_007424394.1 )

YdcL (Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core)

NC_020238
(Bacillus cereus HD73)

2e-60

8) YBT020_24480
( YP_005568541.1 )

protein YdcL

NC_017200
(Bacillus thuringiensis YBT-020)

2e-60

9) int2
( YP_006929747.1 )

ICEBs1 integrase Int

NC_018877
(Bacillus thuringiensis Bt407)

2e-60

10) CT43_CH4990
( YP_005574938.1 )

DNA integration/recombination/inversion protein

NC_017208
(Bacillus thuringiensis CT-43)

2e-60

11) H175_ch5072
( YP_007481530.1 )

Integrase

NC_020376
(Bacillus thuringiensis IS5056)

2e-60

12) BTF1_15350
( YP_006611165.1 )

protein YdcL

NC_018508
(Bacillus thuringiensis HD-789)

3e-60

13) HD73_2244
( YP_007421343.1 )

YdcL (Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core)

NC_020238
(Bacillus cereus HD73)

2e-59

14) BTF1_19975
( YP_006612084.1 )

protein YdcL

NC_018508
(Bacillus thuringiensis HD-789)

7e-57

15) BTF1_15900
( YP_006611273.1 )

protein YdcL

NC_018508
(Bacillus thuringiensis HD-789)

3e-54

• Sequence Alignments

1) SAHV_0779 in NC_009782


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  574 bits (2168),  Expect = 3e-165, Method: Compositional matrix adjust.
 Identities = 368/368 (100%), Positives = 368/368 (100%), Gaps = 0/368 (0%)

Query  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60
            MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG
Sbjct  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60

Query  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120
            VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF
Sbjct  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120

Query  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180
            QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ
Sbjct  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180

Query  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRdinfdddfihinKTDYHGEVTAPK  240
            FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK
Sbjct  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK  240

Query  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300
            TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV
Sbjct  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300

Query  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360
            LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST
Sbjct  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360

Query  361  QKEIVKYL  368
            QKEIVKYL
Sbjct  361  QKEIVKYL  368

2) SAV0783 in NC_002758


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  574 bits (2168),  Expect = 3e-165, Method: Compositional matrix adjust.
 Identities = 368/368 (100%), Positives = 368/368 (100%), Gaps = 0/368 (0%)

Query  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60
            MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG
Sbjct  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60

Query  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120
            VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF
Sbjct  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120

Query  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180
            QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ
Sbjct  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180

Query  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRdinfdddfihinKTDYHGEVTAPK  240
            FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK
Sbjct  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK  240

Query  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300
            TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV
Sbjct  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300

Query  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360
            LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST
Sbjct  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360

Query  361  QKEIVKYL  368
            QKEIVKYL
Sbjct  361  QKEIVKYL  368

3) int in NC_003923


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  572 bits (2158),  Expect = 2e-164, Method: Compositional matrix adjust.
 Identities = 342/365 (94%), Positives = 356/365 (98%), Gaps = 0/365 (0%)

Query  7    NLNLSHNIYKDTKRGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGQ  66
            NLNLSHNIYKD+K GTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVG+
Sbjct  4    NLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGH  63

Query  67   LNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSIDVFKMTTQDVMKFQNK  126
            LNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKS+DVFKMTTQDVMKFQNK
Sbjct  64   LNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNK  123

Query  127  KLKEGYSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQ  186
            KLKEG SGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQ
Sbjct  124  KLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQ  183

Query  187  FYGALVTQQQKLFFKLLFYSGARKGEIRALTWRDVNFEDEFIHINKTDYHGEVTAPKTKS  246
            FY AL TQQQKLFFKLLFYSGARKGEIRALTWRD+NF+D+FIHINKTDYHGEVTAPKTKS
Sbjct  184  FYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKS  243

Query  247  AIRDIYLPTHMMDDIKDYLIWYKENNIYKDDYVLFGTFFKTYSESTIDRWFTTALKVLDD  306
            AIRDIYLPTHMM DIKDYLIWYKENNIYKDDYVLFGTF+K+YSESTIDRWFT ALKVLD+
Sbjct  244  AIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKVLDE  303

Query  307  QLPDGQTFPRIVIHELRHSHASMLVNHGASIMVIAQRLGHADSNEVYNRYGHLYPSTQKE  366
            QLP+GQ FPRIVIHELRHSHASMLVN GAS+M+IAQRLGH+D+ EVYNRYGHLYPSTQKE
Sbjct  304  QLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKE  363

Query  367  IVKYL  371
            IVKYL
Sbjct  364  IVKYL  368

4) SPSINT_0497 in NC_014925


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  567 bits (2142),  Expect = 3e-163, Method: Compositional matrix adjust.
 Identities = 331/368 (90%), Positives = 357/368 (98%), Gaps = 0/368 (0%)

Query  1    MTHDLRLAHNIYKDSKRGTYYFRITYYDKTNKRQYITRKGFKQRKEAVKKCNEIMDELEG  60
            M+ +L L+HNIYKD+K GTYYFRITYYDK+N R+YITRKGFKQRK+AVKKCNE+MDELEG
Sbjct  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60

Query  61   IGQLNRLPFDKLVEEYIEWYSARRKSSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120
            +G+LNRLPFDKLVEEYI+WYSARRK+SSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF
Sbjct  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120

Query  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFYDLKQNVASLVGNFEIESQKRLNYWTLEQ  180
            QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKF +LKQNVASLVGNFEIESQKRLNYWTLEQ
Sbjct  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180

Query  181  FNEFYDALATQQQKLFFKLLFYSGARKGEIRALTWRDVNFDDEFIHINKTDYHGEVTAPK  240
            FN+FY+ALATQQQKLFFKLLFYSGARKGEIRALTWRD+NFDD+FIHINKTDYHGEVTAPK
Sbjct  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK  240

Query  241  TKSAIRDIYLPAHMMNDIKNYLNWYKENNIYKDDYVLFGTFFKAYSESTIDRWFTTALKV  300
            TKSAIRDIYLP+HMM DIK+YL WYKENNIYKDDYVLFGTF+KAYSESTIDRWFT ALKV
Sbjct  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300

Query  301  LDNQLPDGQTFPRIVIHELRHSHASMLVNHGASIMVIAQRLGHADSNEVYNRYGHLYPST  360
            LD+QLP+GQ FPRIVIHELRHSHASMLVN GAS+M+IAQRLGH+D+ EVYNRYGHLYPST
Sbjct  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360

Query  361  QKEIVKYL  368
            QKEIVKYL
Sbjct  361  QKEIVKYL  368

5) ispD_1 in NC_017347


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  559 bits (2111),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 358/368 (98%), Positives = 362/368 (99%), Gaps = 0/368 (0%)

Query  1    MTHNLNLSHNIYKDTKRGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60
            M+ NLNLSHNIYKD+K GTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG
Sbjct  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60

Query  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120
            VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF
Sbjct  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120

Query  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180
            QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ
Sbjct  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180

Query  181  FNQFYGALVTQQQKLFFKLLFYSGARKGEIRALTWRdinfdddfihinKTDYHGEVTAPK  240
            FNQFY AL TQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK
Sbjct  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK  240

Query  241  TKSAIRDIYLPTHMMDDIKGYLNWYKENNIFKDDYVLFGTFYKAYSESTIDRWFTNALKV  300
            TKSAIRDIYLPTHMM DIK+YL WYKENNI+KDDYVLFGTFYKAYSESTIDRWFTNALKV
Sbjct  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300

Query  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360
            LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST
Sbjct  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360

Query  361  QKEIVKYL  368
            QKEIVKYL
Sbjct  361  QKEIVKYL  368

6) int in NC_007168


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  489 bits (1845),  Expect = 1e-139, Method: Compositional matrix adjust.
 Identities = 277/368 (76%), Positives = 331/368 (90%), Gaps = 6/368 (1%)

Query  1    MNHNLNLSHNIHKDGKRGTYYFRITYYDRTNKRKEIKRSGFKQRKEAVKKCNEIMNELEG  60
            M+ NLNLSHNI KD+K GTYYFRITYYD++N RK I R GFKQRK+AVKKCNE+M+ELEG
Sbjct  1    MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEG  60

Query  61   IGHINKLPFNELANEYLDWYSARRKSSSVKSLKTHLNNHLIPYFKSIDVFEMTTQDIMKF  120
            +GH+N+LPF+ L +EY+DWYSARRK+SSVK+LKTH NNHL+PYFKS+DVF MTTQD+MKF
Sbjct  61   VGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKF  120

Query  121  QNRKLKENHSGEYLKKMHIFIVSLLNHAMKYHGLQNNVASLVGNFEVESNKRFNYWTLDQ  180
            QN+KLKE HSG+YLKKMH+++VSLLNHAMK+H L++NVASLVGNFE+ES+KR+NYWTL+Q
Sbjct  121  QNKKLKEGHSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQ  180

Query  181  FNQFYEVLPTLEQKVFFKLLFYSGARKGEVRALTWEDINFKEEYIHINKTDYHGEVTSPK  240
            FNQFYE L+T +QK+FFKLLFYSGARKGE+RALTW DINF +++IHINKTDYHGEVT+PK
Sbjct  181  FNQFYEALATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPK  240

Query  241  TKAGIRDIYLPTHMMNDLKNYHSWYKEHNMYKDSYVLFGTFFKAFSESKIDRWFTNAYKL  300
            TK++IRDIYLPTHMM D+K+Y  WYKE+N+YKD YVLFGTF+KA+SES IDRWFTNA K+
Sbjct  241  TKSAIRDIYLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV  300

Query  301  L------PTDFPKIVIHEIRHSHASLLINHGASLMVIAQRLGHSSIEEVSTRYGHLYPST  354
            L        +FP+IVIHE+RHSHAS+L+N GAS+M+IAQRLGHS   EV  RYGHLYPST
Sbjct  301  LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPST  360

Query  355  QKEIVKYL  362
            QKEIVKYL
Sbjct  361  QKEIVKYL  368

7) YBT020_24480 in NC_017200


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  226 bits (842),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 152/361 (43%), Positives = 234/361 (65%), Gaps = 18/361 (4%)

Query  3    IYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTkkeareaeakMLVEKESNSNL---TFE  59
            IYKD K GTY+F +   +   T K + R+GFK +K+A      M+ E E+ ++L    F+
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   HVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINE-YS  118
             + + Y++WY+ RRK SS++++K    NHL+  F  M +  +T ++VM +QNK ++E  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDE  178
            ++YLKK H  L +++N ++KFH L  N A + GNF+ ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  PMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+I+KT Y+ +VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PNFVMNLLKSIK---KDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKI---AMVK  292
            P  +M  +K      K+  +    K+DYV+FG FY + + +++++ F N LK+    + +
Sbjct  251  PTHMMYDIKDYLIWYKENNI---YKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPN  307

Query  293  E-----IVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAF  347
                  IV+HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E+V +
Sbjct  308  GQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKY  367

Query  348  M  348
            +
Sbjct  368  L  368

8) HD73_5296 in NC_020238


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  226 bits (842),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 152/361 (43%), Positives = 234/361 (65%), Gaps = 18/361 (4%)

Query  3    IYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTkkeareaeakMLVEKESNSNL---TFE  59
            IYKD K GTY+F +   +   T K + R+GFK +K+A      M+ E E+ ++L    F+
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   HVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINE-YS  118
             + + Y++WY+ RRK SS++++K    NHL+  F  M +  +T ++VM +QNK ++E  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDE  178
            ++YLKK H  L +++N ++KFH L  N A + GNF+ ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  PMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+I+KT Y+ +VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PNFVMNLLKSIK---KDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKI---AMVK  292
            P  +M  +K      K+  +    K+DYV+FG FY + + +++++ F N LK+    + +
Sbjct  251  PTHMMYDIKDYLIWYKENNI---YKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPN  307

Query  293  E-----IVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAF  347
                  IV+HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E+V +
Sbjct  308  GQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKY  367

Query  348  M  348
            +
Sbjct  368  L  368

9) int2 in NC_018877


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  225 bits (840),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 151/361 (42%), Positives = 235/361 (66%), Gaps = 18/361 (4%)

Query  3    IYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTkkeareaeakMLVEKESNSNL---TFE  59
            IYKD K GTY+F +   +   T K + R+GFK +K+A      M+ E E+ ++L    F+
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   HVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINE-YS  118
             + + Y++WY+ RRK SS++++K    NHL+  F  M +  +T ++VM +QNK ++E  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDE  178
            ++YLKK H  L +++N ++KFH L  N A + GNF+ ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  PMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+I+KT Y+ +VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PNFVMNLLRGIK---KDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKI---AMVK  292
            P  +M  +++     K+  +    K+DYV+FG FY + + +++++ F N LK+    + +
Sbjct  251  PTHMMYDIKDYLIWYKENNI---YKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPN  307

Query  293  E-----IVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAF  347
                  IV+HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E+V +
Sbjct  308  GQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKY  367

Query  348  M  348
            +
Sbjct  368  L  368

10) CT43_CH4990 in NC_017208


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  225 bits (840),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 151/361 (42%), Positives = 235/361 (66%), Gaps = 18/361 (4%)

Query  3    IYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTkkeareaeakMLVEKESNSNL---TFE  59
            IYKD K GTY+F +   +   T K + R+GFK +K+A      M+ E E+ ++L    F+
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   HVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINE-YS  118
             + + Y++WY+ RRK SS++++K    NHL+  F  M +  +T ++VM +QNK ++E  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDE  178
            ++YLKK H  L +++N ++KFH L  N A + GNF+ ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  PMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+I+KT Y+ +VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PNFVMNLLRGIK---KDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKI---AMVK  292
            P  +M  +++     K+  +    K+DYV+FG FY + + +++++ F N LK+    + +
Sbjct  251  PTHMMYDIKDYLIWYKENNI---YKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPN  307

Query  293  E-----IVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAF  347
                  IV+HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E+V +
Sbjct  308  GQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKY  367

Query  348  M  348
            +
Sbjct  368  L  368

11) H175_ch5072 in NC_020376


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  225 bits (840),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 151/361 (42%), Positives = 235/361 (66%), Gaps = 18/361 (4%)

Query  3    IYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTkkeareaeakMLVEKESNSNL---TFE  59
            IYKD K GTY+F +   +   T K + R+GFK +K+A      M+ E E+ ++L    F+
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   HVADSYFNWYTQRRKQSSINTIKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINE-YS  118
             + + Y++WY+ RRK SS++++K    NHL+  F  M +  +T ++VM +QNK ++E  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKRINFWEFEEFKQFISVVDE  178
            ++YLKK H  L +++N ++KFH L  N A + GNF+ ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  PMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+I+KT Y+ +VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PNFVMNLLRGIK---KDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKI---AMVK  292
            P  +M  +++     K+  +    K+DYV+FG FY + + +++++ F N LK+    + +
Sbjct  251  PTHMMYDIKDYLIWYKENNI---YKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPN  307

Query  293  E-----IVMHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEVVAF  347
                  IV+HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E+V +
Sbjct  308  GQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKY  367

Query  348  M  348
            +
Sbjct  368  L  368

12) BTF1_15350 in NC_018508


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  225 bits (840),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 161/363 (45%), Positives = 237/363 (66%), Gaps = 22/363 (6%)

Query  3    IYKDEQRGTYYFVTRIRQFD--GTLKQVKRRGFKTkkeareaeakMLVEKETTS---SLT  57
            IYKD + GTYYF  RI  +D   T K + R+GFK +K+A      M+ E E  +    L 
Sbjct  11   IYKDAKLGTYYF--RITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLP  68

Query  58   FSQAADSYFNWYSQRRKQSSIETIKNVIYNHLVIEFGNLKVEQIIPKHVMNYQNKIINK-  116
            F +  + Y++WYS RRK SS+ ++K    NHL+  F ++ V ++  ++VM++QNK ++  
Sbjct  69   FDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEG  128

Query  117  YSAKHLKKIHAVLSAIFNFSIKFHGLTNNPAKITGNFEKESNKRMNFWEFEEFKQFILAV  176
             S+  LKK+H  L +++N ++KFH L +N A + GNFE ES+KR+N+W +E+F+QF  A+
Sbjct  129  HSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEAL  188

Query  177  DDPLYKTFFSVLYYSGARKGELMALTWSDINFDEKTININKTEYNRQVTEPKTKASNRII  236
                 K FF +L+YSGARKGE+ ALTW DINFD+  I+INKT+Y+ +VT PKTK++ R I
Sbjct  189  ATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDI  248

Query  237  MLPSFIMDMLHDIKKTAAL---NAPVKSDYVVFGEFYNSISSSTLRQKFIKYIKIAQVK-  292
             LP+   +M+ DIK        N   K DYV+FG FY++ S ST+ + F + +K+ + + 
Sbjct  249  YLPT---HMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQL  305

Query  293  -------KIVLHEFRHSHASYLINKGVSPLIVAQRLGHSDVATTLNTYSHLYPSKQAEVV  345
                   +IV+HE+RHSHAS L+N G S +I+AQRLGHSD +   N Y+HLYPS Q E+V
Sbjct  306  PNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIV  365

Query  346  AFM  348
             ++
Sbjct  366  KYL  368

13) HD73_2244 in NC_020238


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  223 bits (830),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 153/360 (43%), Positives = 239/360 (67%), Gaps = 16/360 (4%)

Query  3    IYKDKERGTYFFVVRVRQFD--GTQKQVKRRGFKTkkeareaeakMLVEKETNSNL---T  57
            IYKD   GTY+F  R+  +D   T+K + R+GFK +K+A      M+ E E  ++L    
Sbjct  11   IYKDAKLGTYYF--RITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLP  68

Query  58   FAQVADSYFDWYCQRRKHTSINVIRNIIYNHLIQEFNKIKIDQITAKHIMHYQNKII-NN  116
            F ++ + Y+DWY  RRK +S++ ++    NHL+  F+ + + ++T++++M +QNK + + 
Sbjct  69   FDKLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEG  128

Query  117  YSADHLKKIHTVLSSIFNFAIKFHGLTNNPARIAGNFEKESNKRMNFWEFDEFHQFIDSV  176
             S+D LKK+H  L S++N A+KFH L +N A + GNFE ES+KR+N+W +++F+QF +++
Sbjct  129  HSGDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEAL  188

Query  177  DDLLYKTFFSTLYYSGARKGELLALTWEDINFEEKTININKTEFNRKITKPKTKSSNRII  236
                 K FF  L+YSGARKGE+ ALTW DINF++  I+INKT+++  +T PKTKS+ R I
Sbjct  189  ATQQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDI  248

Query  237  MLPSLVIDLLKNLKEHATVKSPIKINYVVFGEFYTSISASTLDRKYTNYV------LNAG  290
             LP+ ++  +K+       ++  K +YV+FG FY + S ST+DR +TN +      L  G
Sbjct  249  YLPTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPNG  308

Query  291  VK--RILLHEFRHSHASYLINKGVSPLIVAQRLGHSDVATTLNTYSHLYPSKQAEVIAFI  348
             +  RI++HE+RHSHAS L+N G S +I+AQRLGHSD +   N Y+HLYPS Q E++ ++
Sbjct  309  QNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKYL  368

14) BTF1_19975 in NC_018508


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  214 bits (796),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 149/360 (42%), Positives = 232/360 (65%), Gaps = 16/360 (4%)

Query  3    IYKDEQRGTYYFVTRVRQLDGTLKQVKRRGFKTkkeareaeakMLVEKVTTS---SLTFS  59
            IYKD + GTYYF     +   T K + R+GFK +K+A      M+ E    +    L F 
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   QVADSYFDWYSQRRKQSSIVTIRNVIYNHLITEFGKLKIEQITPKHIMNYQNKIINQ-YS  118
            ++ + Y+DWYS RRK SS+ +++    NHL+  F  + + ++T +++M++QNK +++  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  AKHLKKIHAVLSAIFNFSIKFHGLTTNPARITGNFEKESNKRMNFWEFEEFKQFIAVVDE  178
            +  LKK+H  L +++N ++KFH L  N A + GNFE ES+KR+N+W +E+F+QF   +  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  LLYKAFFSTLYYSGARKGELLALTWSDINFEEKTIDINKTEFERKVTKPKTKASNRIIML  238
               K FF  L+YSGARKGE+ ALTW DINF++  I+INKT+++  VT PKTK++ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  PTHCIDLLKE--LHCEKSKEFPVKNDYVVFGEFRSSIAVSTLSRNYQKYLKMSDVK----  292
            PTH +  +K+  +    ++ +  K+DYV+FG F  + + ST+ R + + LK+ D +    
Sbjct  251  PTHMMYDIKDYLIWYKENNIY--KDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPNG  308

Query  293  ----KILIHEFRHSHASYLINKGVSPLVVAQRLGHSNVSTTLNTYSHLYPSKQAEVVAFM  348
                +I+IHE+RHSHAS L+N G S +++AQRLGHS+ +   N Y+HLYPS Q E+V ++
Sbjct  309  QNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKYL  368

15) BTF1_15900 in NC_018508


> NC_002758_P2|1|G1|15923773|NP_371307.1|Staphylococcus_aureus_subsp._aureus_Mu50|-|473..1579|-|SAV0783|integrase
Length=368

 Score =  205 bits (763),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 147/358 (42%), Positives = 230/358 (65%), Gaps = 12/358 (3%)

Query  3    IYKDKERGTYFFVVRVRQFDGTQKQVKRRGFKTkkeareaeakMLVEKETNS---SLTFA  59
            IYKD   GTY+F +   +   T+K + R+GFK +K+A      M+ E E  +    L F 
Sbjct  11   IYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKKCNEMMDELEGVGHLNRLPFD  70

Query  60   QVADSYFDWYCQRRKQSSINAIKNAIYNHLLKEFGKMKIDTITAKHVMNYQNKLLNN-YS  118
            ++ + Y+DWY  RRK SS++A+K    NHLL  F  M +  +T+++VM++QNK L++  S
Sbjct  71   KLVEEYIDWYSARRKTSSVKALKTHTNNHLLPYFKSMDVFKMTTQDVMKFQNKKLKEGHS  130

Query  119  ADTLKQIHTILSAIFNFAIKFYGLTSNPARIAGNFELESNKRMSYWEFDEFQRFIDTVDD  178
            +D LK++H  L +++N A+KF  L  N A + GNFE+ES+KR++YW +++F++F +++  
Sbjct  131  GDYLKKMHVYLVSLLNHAMKFHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALAT  190

Query  179  LLYNAFFSTLYYSGARKGELLALTWADVDFVGKTININKTEYNRQVTKPKTKSSNRiill  238
               + FF  L+YSGARKGE+ ALTW D++F +  I+INKT+Y+ +VT PKTKS+ R I L
Sbjct  191  QQQKLFFKLLFYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL  250

Query  239  ptliinllkklkEHATLTAPVKNDYVVFGEFYNSIATSTLDERYKKYV--------ATAG  290
            PT ++  +K            K+DYV+FG FY++ + ST+D ++ + +            
Sbjct  251  PTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKVLDEQLPNGQN  310

Query  291  VKKILLHEFRHSHASYLINKGVSPLVVAQRLGHSDVATTLNTYSHLYPSKQAEALAFI  348
              +I++HE+RHSHAS L+N G S +++AQRLGHSD +   N Y+HLYPS Q E + ++
Sbjct  311  FPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVYNRYGHLYPSTQKEIVKYL  368