Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative integrase |
NC_013364 (Escherichia coli 11128) |
0.0 |
100 |
|
integrase |
NC_013361 (Escherichia coli 11368) |
0.0 |
100 |
|
integrase |
NC_011353 (Escherichia coli EC4115) |
0.0 |
100 |
|
P4 family integrase |
NC_002655 (Escherichia coli EDL933) |
0.0 |
100 |
|
P4 family integrase |
NC_002655 (Escherichia coli EDL933) |
0.0 |
100 |
|
integrase |
NC_002695 (Escherichia coli Sakai) |
0.0 |
100 |
|
P4-family integrase |
NC_013008 (Escherichia coli TW14359) |
0.0 |
100 |
|
putative integrase |
NC_017906 (Escherichia coli Xuzhou21) |
0.0 |
100 |
|
putative P4-family integrase |
NC_017631 (Escherichia coli ABU 83972) |
0.0 |
99 |
|
P4 family integrase |
NC_004431 (Escherichia coli CFT073) |
0.0 |
99 |
|
P4 family integrase |
NC_017652 (Escherichia coli clone D i14) |
0.0 |
99 |
|
P4 family integrase |
NC_017651 (Escherichia coli clone D i2) |
0.0 |
99 |
|
integrase |
NC_017628 (Escherichia coli IHE3034) |
0.0 |
99 |
|
Prophage CP4-57 integrase |
NC_022370 (Escherichia coli PMV-1) |
0.0 |
99 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
0.0 |
99 |
|
putative integrase |
NC_017632 (Escherichia coli UM146) |
0.0 |
99 |
|
P4 family integrase |
NC_007946 (Escherichia coli UTI89) |
0.0 |
99 |
|
putative P4-family integrase |
NC_017328 (Shigella flexneri 2002017) |
0.0 |
99 |
|
phage integrase family site specific recombinase |
NC_010498 (Escherichia coli SMS-3-5) |
0.0 |
97 |
|
integrase |
NC_011601 (Escherichia coli E2348/69) |
0.0 |
98 |
|
integrase |
NC_018650 (Escherichia coli 2009EL-2050) |
0.0 |
98 |
|
integrase |
NC_018661 (Escherichia coli 2009EL-2071) |
0.0 |
98 |
|
integrase |
NC_018658 (Escherichia coli 2011C-3493) |
0.0 |
98 |
|
putative P4-family integrase |
NC_021290 (Aeromonas hydrophila ML09-119) |
5e-135 |
67 |
|
Integrase |
NC_020541 (Rhodanobacter sp. 2APBS1) |
6e-129 |
66 |
|
P4-family integrase |
NC_018708 (Acidovorax sp. KKS102) |
4e-128 |
64 |
|
putative integrase |
NC_016147 (Pseudoxanthomonas spadix BD-a59) |
3e-122 |
63 |
|
P4 family integrase |
NC_016002 (Pseudogulbenkiania sp. NH8B) |
4e-109 |
56 |
|
Integrase |
NC_012559 (Laribacter hongkongensis HLHK9) |
9e-87 |
48 |
|
Integrase |
NC_012559 (Laribacter hongkongensis HLHK9) |
1e-77 |
49 |
|
putative phage integrase |
NC_016585 (Azospirillum lipoferum 4B) |
7e-63 |
44 |
|
transposase |
NC_015580 (Novosphingobium sp. PP1Y) |
1e-61 |
42 |
|
integrase family protein |
NC_015422 (Alicycliphilus denitrificans K601) |
2e-61 |
44 |
|
integrase family protein |
NC_010172 (Methylobacterium extorquens PA1) |
5e-59 |
42 |
|
transposase |
NC_008343 (Granulibacter bethesdensis CGDNIH1) |
6e-59 |
41 |
|
Site-specfic recombinase, phage integrase family |
NC_012808 (Methylobacterium extorquens AM1) |
1e-58 |
44 |
|
phage integrase |
NC_007948 (Polaromonas sp. JS666) |
5e-57 |
41 |
|
Integrase |
NC_015717 (Hyphomicrobium sp. MC1) |
1e-56 |
42 |
|
DNA integration/recombination/inversion protein |
NC_020908 (Octadecabacter arcticus 238) |
1e-56 |
42 |
|
Integrase |
NC_019902 (Thioalkalivibrio nitratireducens DSM 14787) |
4e-55 |
44 |
|
transposase |
NC_019396 (Gluconobacter oxydans H24) |
8e-55 |
41 |
|
phage integrase family protein |
NC_008781 (Polaromonas naphthalenivorans CJ2) |
4e-54 |
41 |
|
Integrase |
NC_021172 (Hyphomicrobium denitrificans 1NES1) |
2e-46 |
42 |
|
phage-related integrase |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
1e-44 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002655_P2' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc