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Homologs of unnamed gene of JQ994271

537

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EcE24377A_3377
( YP_001464377.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

1e-172

2) EcSMS35_3112
( YP_001745129.1 )

site-specific recombinase, phage integrase family protein

NC_010498
(Escherichia coli SMS-3-5)

9e-173

3) SeHA_C4738
( YP_002048369.1 )

integrase

NC_011083
(Salmonella enterica SL476)

3e-172

4) SN31241_7100
( YP_008358628.1 )

CP4-like integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

7e-172

5) W5S_1285
( YP_006282258.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

4e-133

6) ETAC_13020
( YP_007630085.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

5e-133

7) int
( YP_001908356.1 )

Prophage integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-132

8) YPK_3149
( YP_001721873.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

6e-131

9) M621_05660
( YP_008157963.1 )

integrase

NC_021659
(Serratia plymuthica S13)

2e-129

10) int
( YP_008137204.1 )

integrase Int

NC_021591
(Serratia odorifera 4Rx13)

2e-129

11) PAU_01003
( YP_003039840.1 )

putative phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-129

12) int
( YP_003713510.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

5e-129

13) CE10_4227
( YP_006146216.1 )

putative prophage integrase

NC_017646
(Escherichia coli CE10)

6e-128

14) ECIAI39_4188
( YP_002410064.1 )

putative prophage integrase

NC_011750
(Escherichia coli IAI39)

6e-128

15) O3M_00580
( YP_006767801.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

1e-127

16) O3O_25120
( YP_006781906.1 )

hypothetical protein

NC_018661
(Escherichia coli 2009EL-2071)

1e-127

17) O3K_00550
( YP_006776846.1 )

hypothetical protein

NC_018658
(Escherichia coli 2011C-3493)

1e-127

18) ybl160
( YP_003001213.1 )

ybl160

NC_012892
(Escherichia coli BL21(DE3))

2e-127

19) ECD_03516
( YP_003056085.1 )

hypothetical protein

NC_012971
(Escherichia coli BL21(DE3))

2e-127

20) intC
( NP_756353.1 )

prophage integrase

NC_004431
(Escherichia coli CFT073)

2e-127

21) ECBD_0066
( YP_003034330.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

2e-127

22) ECB_03516
( YP_003046695.1 )

Int

NC_012967
(Escherichia coli REL606)

2e-127

23) ECP_3765
( YP_671637.1 )

phage integrase

NC_008253
(Escherichia coli 536)

3e-127

24) SSON_3744
( YP_312525.1 )

integrase

NC_007384
(Shigella sonnei Ss046)

3e-127

25) int4
( NP_994857.1 )

integrase

NC_005810
(Yersinia pestis 91001)

1e-126

26) A1122_00590
( YP_005519823.1 )

integrase

NC_017168
(Yersinia pestis A1122)

1e-126

27) YpAngola_A3853
( YP_001608158.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

1e-126

28) int
( YP_002345935.1 )

integrase

NC_003143
(Yersinia pestis CO92)

1e-126

29) int
( YP_005504005.1 )

integrase

NC_017154
(Yersinia pestis D106004)

1e-126

30) int
( YP_005507871.1 )

integrase

NC_017160
(Yersinia pestis D182038)

1e-126

31) YPC_0922
( YP_005622895.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

1e-126

32) y3271
( NP_670570.1 )

integrase

NC_004088
(Yersinia pestis KIM)

1e-126

33) YPN_3086
( YP_649013.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

1e-126

34) int
( YP_003567008.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

1e-126

35) Dd586_2842
( YP_003334387.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

1e-126

36) YPDSF_0629
( YP_001162011.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

2e-126

37) YpsIP31758_0884
( YP_001399868.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-126

38) int
( YP_071664.1 )

phage integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

3e-126

39) YPTS_3293
( YP_001873705.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-126

40) YPK_0925
( YP_001719679.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

3e-126

41) intL
( NP_290239.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_002655
(Escherichia coli EDL933)

5e-126

42) ECO55CA74_21080
( YP_006161321.1 )

putative integrase for prophage 933L and the LEE pathogenicity island

NC_017656
(Escherichia coli RM12579)

5e-126

43) ECs4534
( NP_312561.1 )

integrase

NC_002695
(Escherichia coli Sakai)

5e-126

44) intL
( YP_003080451.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_013008
(Escherichia coli TW14359)

5e-126

45) CDCO157_4272
( YP_006315138.1 )

putative integrase

NC_017906
(Escherichia coli Xuzhou21)

5e-126

46) ETEC_3899
( YP_006117440.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

5e-126

47) intL
( YP_003501848.1 )

CP4-like integrase

NC_013941
(Escherichia coli CB9615)

1e-125

48) ECH74115_5032
( YP_002273139.1 )

integrase

NC_011353
(Escherichia coli EC4115)

1e-125

49) intC
( YP_691185.1 )

integrase

NC_008258
(Shigella flexneri 8401)

5e-126

50) EcHS_A0329
( YP_001457101.1 )

site-specific recombinase, phage integrase

NC_009800
(Escherichia coli HS)

6e-126

51) SFxv_4026
( YP_005729297.1 )

Sai integrase

NC_017328
(Shigella flexneri 2002017)

1e-125

52) S4835
( NP_839238.1 )

integrase

NC_004741
(Shigella flexneri 2457T)

1e-125

53) SF3698
( NP_709437.1 )

integrase

NC_004337
(Shigella flexneri 301)

1e-125

54) ECABU_c41260
( YP_006108090.1 )

putative phage integrase

NC_017631
(Escherichia coli ABU 83972)

4e-125

55) intC
( YP_006156223.1 )

putative prophage integrase

NC_017652
(Escherichia coli clone D i14)

4e-125

56) intC
( YP_006151304.1 )

putative prophage integrase

NC_017651
(Escherichia coli clone D i2)

4e-125

57) SeSA_A0666
( YP_002113632.1 )

integrase

NC_011094
(Salmonella enterica CVM19633)

1e-124

58) PC1_2870
( YP_003018435.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-124

59) EcSMS35_0299
( YP_001742404.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

3e-124

60) ETAF_0751
( YP_005698365.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

1e-123

61) Pecwa_1403
( YP_003258809.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

7e-124

62) ECSE_0264
( YP_002291539.1 )

putative phage integrase

NC_011415
(Escherichia coli SE11)

1e-123

63) Pat9b_1012
( YP_004114892.1 )

integrase family protein

NC_014837
(Pantoea sp. At-9b)

3e-123

64) O3K_20180
( YP_006780702.1 )

prophage CPS-53 integrase

NC_018658
(Escherichia coli 2011C-3493)

8e-123

65) EC55989_0268
( YP_002401394.1 )

prophage CPS-53 integrase

NC_011748
(Escherichia coli 55989)

8e-123

66) ETEC_0316
( YP_006113905.1 )

prophage integrase

NC_017633
(Escherichia coli ETEC H10407)

1e-122

67) Pecwa_1377
( YP_003258785.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

2e-122

68) Dda3937_00938
( YP_003884289.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

2e-122

69) ECABU_c03450
( YP_006104480.1 )

DNA integration/recombination/invertion protein

NC_017631
(Escherichia coli ABU 83972)

3e-122

70) A3UG_04555
( YP_006476358.1 )

prophage CPS-53 integrase

NC_018079
(Enterobacter cloacae SDM)

4e-122

71) ECO55CA74_01660
( YP_006157517.1 )

Integrase for prophage CP-933I

NC_017656
(Escherichia coli RM12579)

9e-122

72) W5S_3565
( YP_006284507.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

2e-121

73) YE4117
( YP_001008254.1 )

putative phage integrase

NC_008800
(Yersinia enterocolitica 8081)

2e-121

74) ECs0289
( NP_308316.1 )

integrase

NC_002695
(Escherichia coli Sakai)

2e-121

75) SMWW4_v1c08950
( YP_007404718.1 )

putative site specific integrase

NC_020211
(Serratia marcescens WW4)

3e-121

76) PC1_3281
( YP_003018833.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

4e-121

77) G2583_0351
( YP_003497974.1 )

Integrase for prophage CP-933I

NC_013941
(Escherichia coli CB9615)

5e-121

78) Z0324
( NP_285976.1 )

integrase for prophage CP-933I

NC_002655
(Escherichia coli EDL933)

1e-120

79) intS
( YP_004950715.1 )

prophage CPS-53 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

8e-121

80) PAGR_g2495
( YP_005993222.1 )

site-specific recombinase, phage integrase family

NC_017554
(Pantoea ananatis PA13)

6e-120

81) KPK_4426
( YP_002240225.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

6e-120

82) SeSA_A0374
( YP_002113350.1 )

site-specific recombinase, phage integrase family protein

NC_011094
(Salmonella enterica CVM19633)

1e-119

83) SEEB0189_04710
( YP_008307295.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

2e-119

84) ECENHK_04640
( YP_006577439.1 )

integrase

NC_018405
(Enterobacter cloacae ENHKU01)

3e-119

85) A225_1133
( YP_006496884.1 )

phage integrase

NC_018106
(Klebsiella oxytoca E718)

4e-119

86) A225_4904
( YP_006500577.1 )

phage integrase

NC_018106
(Klebsiella oxytoca E718)

5e-119

87) KPHS_10130
( YP_005225313.1 )

putative site specific integrase

NC_016845
(Klebsiella pneumoniae HS11286)

9e-119

88) N559_4136
( YP_008427041.1 )

site specific integrase

NC_022082
(Klebsiella pneumoniae JM45)

9e-119

89) EAE_02780
( YP_004590770.1 )

Integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-118

90) ETAE_0799
( YP_003294855.1 )

site specific integrase

NC_013508
(Edwardsiella tarda EIB202)

3e-118

91) KOX_02335
( YP_005016447.1 )

Integrase

NC_016612
(Klebsiella oxytoca KCTC 1686)

3e-118

92) int
( YP_002399202.1 )

Integrase from prophage

NC_011745
(Escherichia coli ED1a)

3e-118

93) A225_1439
( YP_006497184.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

4e-118

94) ECH74115_0306
( YP_002268886.1 )

site-specific recombinase, phage integrase family

NC_011353
(Escherichia coli EC4115)

6e-118

95) ETAF_0741
( YP_005698355.1 )

prophage CP-933I integrase protein

NC_017309
(Edwardsiella tarda FL6-60)

3e-117

96) int
( YP_002383909.1 )

Integrase

NC_011740
(Escherichia fergusonii ATCC 35469)

3e-117

97) ECNA114_2439
( YP_006139547.1 )

putative phage integrase

NC_017644
(Escherichia coli NA114)

5e-117

98) ECSF_2224
( YP_003350214.1 )

putative phage integrase

NC_013654
(Escherichia coli SE15)

5e-117

99) EAE_24695
( YP_004595111.1 )

putative integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

1e-116

100) ETAC_11945
( YP_007629870.1 )

putative phage integrase

NC_020796
(Edwardsiella tarda C07-087)

1e-116

101) ESA_03025
( YP_001439090.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

2e-116

102) CSSP291_04405
( YP_007439767.1 )

putative integrase

NC_020260
(Cronobacter sakazakii Sp291)

3e-116

103) ECL_03688
( YP_003614171.1 )

putative integrase

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-116

104) ECL_01076
( YP_003611586.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-116

105) EAE_06555
( YP_004591514.1 )

hypothetical protein

NC_015663
(Enterobacter aerogenes KCTC 2190)

7e-116

106) S70_17360
( YP_006217973.1 )

CPS-53 (KpLE1) prophage, Sf6-like integrase

NC_017731
(Providencia stuartii MRSN 2154)

2e-115

107) PC1_2828
( YP_003018394.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-115

108) SMWW4_v1c00920
( YP_007403919.1 )

phage integrase

NC_020211
(Serratia marcescens WW4)

2e-115

109) YE105_C2844
( YP_004299043.1 )

Integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

3e-115

110) YPTB3886
( YP_072362.1 )

integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

4e-115

111) YPTS_4103
( YP_001874506.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

4e-115

112) YE105_C3845
( YP_004300042.1 )

putative phage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-115

113) xerC4
( NP_994679.1 )

phage integrase

NC_005810
(Yersinia pestis 91001)

6e-115

114) A1122_05665
( YP_005520819.1 )

putative phage integrase

NC_017168
(Yersinia pestis A1122)

6e-115

115) YPA_4123
( YP_654029.1 )

putative phage integrase

NC_008150
(Yersinia pestis Antiqua)

6e-115

116) YPO4033
( YP_002348896.1 )

phage integrase

NC_003143
(Yersinia pestis CO92)

6e-115

117) YPD4_3547
( YP_005506754.1 )

putative phage integrase

NC_017154
(Yersinia pestis D106004)

6e-115

118) YPD8_3553
( YP_005510614.1 )

putative phage integrase

NC_017160
(Yersinia pestis D182038)

6e-115

119) y4052
( NP_671345.1 )

integrase

NC_004088
(Yersinia pestis KIM)

6e-115

120) YPN_3680
( YP_649607.1 )

phage integrase

NC_008149
(Yersinia pestis Nepal516)

6e-115

121) YPDSF_3775
( YP_001165093.1 )

phage integrase

NC_009381
(Yersinia pestis Pestoides F)

6e-115

122) YpAngola_A4153
( YP_001608430.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

8e-115

123) SEEH1578_21245
( YP_008248300.1 )

integrase

NC_021810
(Salmonella enterica 41578)

1e-114

124) CFSAN002069_19870
( YP_008252715.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

2e-114

125) SeHA_C2638
( YP_002046450.1 )

integrase

NC_011083
(Salmonella enterica SL476)

2e-114

126) YPC_4545
( YP_005626217.1 )

putative phage integrase

NC_017265
(Yersinia pestis Harbin 35)

2e-114

127) plu0125
( NP_927495.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-114

128) EC042_3992
( YP_006098276.1 )

integrase

NC_017626
(Escherichia coli 042)

1e-113

129) Y11_30661
( YP_006006565.1 )

phage integrase

NC_017564
(Yersinia enterocolitica Y11)

5e-114

130) ETAE_3428
( YP_003297470.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

7e-114

131) PAU_01009
( YP_003039846.1 )

putative phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-113

132) EKO11_0064
( YP_005275792.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-113

133) KO11_04405
( YP_006163219.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

2e-113

134) LY180_18845
( YP_008566814.1 )

integrase

NC_022364
(Escherichia coli LY180)

2e-113

135) ECW_m3936
( YP_006126516.1 )

putative integrase

NC_017635
(Escherichia coli W)

2e-113

136) WFL_19235
( YP_006175275.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

2e-113

137) intS
( YP_003466695.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-113

138) P12B_c3788
( YP_006170775.1 )

Sai integrase-like protein

NC_017663
(Escherichia coli P12b)

7e-113

139) EbC_44590
( YP_003743837.1 )

phage integrase

NC_014306
(Erwinia billingiae Eb661)

5e-112

140) ECA3460
( YP_051550.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

7e-112

141) EcSMS35_4002
( YP_001745965.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

9e-112

142) PAU_02730
( YP_003041563.1 )

putative prophage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-111

143) Spro_3887
( YP_001480111.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

2e-111

144) A79E_0092
( YP_006633935.1 )

phage integrase, Phage P4-associated

NC_018522
(Klebsiella pneumoniae 1084)

3e-111

145) KP1_5380
( YP_002921868.1 )

phage integrase family protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

3e-111

146) SerAS9_4095
( YP_004507455.1 )

integrase

NC_015567
(Serratia plymuthica AS9)

3e-111

147) SerAS12_4096
( YP_004502503.1 )

integrase family protein

NC_015566
(Serratia sp. AS12)

3e-111

148) SerAS13_4096
( YP_006026917.1 )

integrase family protein

NC_017573
(Serratia sp. AS13)

3e-111

149) YPK_0061
( YP_001718828.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

6e-111

150) ECO26_4941
( YP_003231837.1 )

integrase

NC_013361
(Escherichia coli 11368)

7e-111

151) SEEH1578_04845
( YP_008245042.1 )

integrase

NC_021810
(Salmonella enterica 41578)

7e-111

152) EcolC_0053
( YP_001723066.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

1e-110

153) ENC_02820
( YP_007844422.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-110

154) PputGB1_0681
( YP_001666927.1 )

integrase family protein

NC_010322
(Pseudomonas putida GB-1)

2e-110

155) A3UG_00595
( YP_006475574.1 )

hypothetical protein

NC_018079
(Enterobacter cloacae SDM)

4e-110

156) Psest_4016
( YP_007242119.1 )

integrase

NC_019936
(Pseudomonas stutzeri RCH2)

1e-108

157) SU5_02989
( YP_006088602.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

7e-109

158) PST_0259
( YP_001170808.1 )

phage integrase family site specific recombinase

NC_009434
(Pseudomonas stutzeri A1501)

7e-109

159) intS
( YP_003712222.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

9e-109

160) Spro_0108
( YP_001476346.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

6e-108

161) SARI_03887
( YP_001572823.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

3e-107

162) ENC_24500
( YP_007846063.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

3e-106

163) SBG_2173
( YP_004731002.1 )

phage integrase

NC_015761
(Salmonella bongori NCTC 12419)

2e-105

164) CFSAN001992_09575
( YP_007471661.1 )

prophage CPS-53 integrase

NC_020307
(Salmonella enterica CFSAN001992)

3e-105

165) ECNA114_4679
( YP_006141802.1 )

Putative integrase

NC_017644
(Escherichia coli NA114)

6e-103

166) SSON53_21650
( YP_005458822.1 )

hypothetical protein

NC_016822
(Shigella sonnei 53G)

1e-102

167) SEEH1578_01295
( YP_008244336.1 )

Phage integrase, Phage P4-associated protein

NC_021810
(Salmonella enterica 41578)

1e-101

168) SU5_03538
( YP_006089141.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

1e-101

169) CFSAN002069_16980
( YP_008252158.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

1e-101

170) SeHA_C3266
( YP_002047021.1 )

site-specific recombinase, phage integrase family

NC_011083
(Salmonella enterica SL476)

1e-101

171) M495_08725
( YP_008229693.1 )

integrase

NC_021741
(Serratia liquefaciens ATCC 27592)

2e-101

172) YPA_0385
( YP_650298.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

3e-101

173) ECED1_5046
( YP_002400791.1 )

putative prophage integrase

NC_011745
(Escherichia coli ED1a)

1e-99

174) CDCO157_0285
( YP_006311144.1 )

putative integrase

NC_017906
(Escherichia coli Xuzhou21)

3e-96

175) XBJ1_1315
( YP_003467235.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase (fragment)

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-89

176) intC
( YP_003296511.1 )

prophage Sf6-like integrase

NC_013508
(Edwardsiella tarda EIB202)

2e-86

177) GM21_1254
( YP_003021073.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

3e-85

178) RSc0968
( NP_519089.1 )

cp4-like integrase

NC_003295
(Ralstonia solanacearum GMI1000)

8e-85

179) vinT
( YP_007990957.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

6e-84

180) PSPTO_5344
( NP_795075.1 )

site-specific recombinase, phage integrase family

NC_004578
(Pseudomonas syringae DC3000)

1e-83

181) HYPMC_0824
( YP_004674631.1 )

Integrase

NC_015717
(Hyphomicrobium sp. MC1)

3e-83

182) intB
( NP_900321.1 )

prophage CP4-like integrase

NC_005085
(Chromobacterium violaceum ATCC 12472)

5e-83

183) Xaut_3444
( YP_001418330.1 )

integrase family protein

NC_009720
(Xanthobacter autotrophicus Py2)

3e-82

184) AvCA_40500
( YP_007894968.1 )

Phage integrase

NC_021149
(Azotobacter vinelandii CA)

4e-82

185) AvCA6_40500
( YP_007900017.1 )

Phage integrase

NC_021150
(Azotobacter vinelandii CA6)

4e-82

186) Avin_40500
( YP_002801161.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

4e-82

187) Q7A_2891
( YP_006297314.1 )

integrase

NC_017857
(Methylophaga sp. JAM1)

5e-82

188) Rfer_1354
( YP_522619.1 )

phage integrase

NC_007908
(Rhodoferax ferrireducens T118)

6e-82

189) D782_3965
( YP_007342049.1 )

Integrase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

7e-82

190) GBP346_A1152
( YP_002895874.1 )

site-specific recombinase, phage integrase family

NC_012695
(Burkholderia pseudomallei MSHR346)

3e-81

191) intB
( YP_001242175.1 )

P4-like integrase

NC_009485
(Bradyrhizobium sp. BTAi1)

4e-81

192) intB
( YP_001143574.1 )

phage integrase

NC_009348
(Aeromonas salmonicida A449)

6e-81

193) int
( YP_008002391.1 )

integrase Int

NC_021237
(Pseudomonas fluorescens CHA0)

7e-81

194) NAL212_1009
( YP_004294089.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

1e-80

195) SYN_01916
( YP_461774.1 )

DNA integration/recombination/inversion protein

NC_007759
(Syntrophus aciditrophicus SB)

1e-80

196) Pcar_1823
( YP_006717564.1 )

integrase, bacteriophage P4-type

NC_007498
(Pelobacter carbinolicus DSM 2380)

2e-80

197) NCGM2_0360
( YP_005978635.1 )

site-specific recombinase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

4e-80

198) Dret_1610
( YP_003198472.1 )

integrase family protein

NC_013223
(Desulfohalobium retbaense DSM 5692)

1e-79

199) MICA_2451
( YP_004866754.1 )

phage integrase family protein

NC_016026
(Micavibrio aeruginosavorus ARL-13)

6e-80

200) AMBLS11_09695
( YP_006824971.1 )

prophage CP4-like integrase

NC_018692
(Alteromonas macleodii Black Sea 11)

7e-80

201) AHML_14825
( YP_008044080.1 )

phage integrase

NC_021290
(Aeromonas hydrophila ML09-119)

8e-80

202) Gbem_2993
( YP_002139792.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

9e-80

203) PFLU0179
( YP_002869874.1 )

putative phage integrase

NC_012660
(Pseudomonas fluorescens SBW25)

2e-79

204) MADE_1010570
( YP_004427250.1 )

integrase

NC_011138
(Alteromonas macleodii Deep ecotype)

2e-79

205) Neut_1125
( YP_747345.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

2e-79

206) Neut_1755
( YP_747954.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

2e-79

207) i14_4873a
( YP_006156926.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

4e-79

208) i02_4873a
( YP_006152007.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

4e-79

209) EbC_31530
( YP_003742531.1 )

integrase

NC_014306
(Erwinia billingiae Eb661)

5e-79

210) PputW619_4347
( YP_001751196.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

8e-79

211) EcSMS35_4753
( YP_001746674.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

9e-79

212) UMNK88_2903
( YP_006134630.1 )

integrase

NC_017641
(Escherichia coli UMNK88)

1e-78

213) C380_06330
( YP_006853614.1 )

phage integrase

NC_018708
(Acidovorax sp. KKS102)

1e-78

214) Gbem_3253
( YP_002140046.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

2e-78

215) ECP_4521
( YP_672358.1 )

prophage P4 integrase

NC_008253
(Escherichia coli 536)

2e-78

216) EKO11_1417
( YP_005277110.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-78

217) intS
( YP_006125209.1 )

prophage integrase

NC_017635
(Escherichia coli W)

2e-78

218) intS
( YP_006173930.1 )

putative integrase

NC_017664
(Escherichia coli W)

2e-78

219) intC
( YP_006169453.1 )

putative prophage integrase

NC_017663
(Escherichia coli P12b)

3e-78

220) ECABU_c48360
( YP_006108746.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

3e-78

221) UM146_21610
( YP_006113162.1 )

prophage P4 integrase

NC_017632
(Escherichia coli UM146)

3e-78

222) KN400_0440
( YP_006889485.1 )

integrase, bacteriophage P4-type

NC_017454
(Geobacter sulfurreducens KN400)

3e-78

223) O3M_07705
( YP_006769202.1 )

prophage CPS-53 integrase

NC_018650
(Escherichia coli 2009EL-2050)

4e-78

224) O3O_17880
( YP_006783329.1 )

prophage CPS-53 integrase

NC_018661
(Escherichia coli 2009EL-2071)

4e-78

225) O3K_07755
( YP_006778258.1 )

prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_018658
(Escherichia coli 2011C-3493)

4e-78

226) intS
( YP_002403615.1 )

prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011748
(Escherichia coli 55989)

4e-78

227) ECs3231
( NP_311258.1 )

prophage Sf6-like integrase

NC_002695
(Escherichia coli Sakai)

5e-78

228) intS
( YP_003079150.1 )

CPS-53 (KpLE1) prophage; prophage CPS-53 integrase

NC_013008
(Escherichia coli TW14359)

5e-78

229) ECH74115_3582
( YP_002271839.1 )

integrase

NC_011353
(Escherichia coli EC4115)

6e-78

230) intC
( NP_288921.1 )

prophage integrase

NC_002655
(Escherichia coli EDL933)

6e-78

231) CDCO157_2996
( YP_006313865.1 )

putative prophage Sf6-like integrase

NC_017906
(Escherichia coli Xuzhou21)

6e-78

232) intB
( YP_543812.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

6e-78

233) CFSAN002050_22445
( YP_008262355.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

6e-78

234) CE10_2735
( YP_006144782.1 )

CPS-53 (KpLE1) prophage prophage CPS-53 integrase

NC_017646
(Escherichia coli CE10)

6e-78

235) intS
( YP_002408455.1 )

putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011750
(Escherichia coli IAI39)

6e-78

236) ECO26_3335
( YP_003230282.1 )

integrase

NC_013361
(Escherichia coli 11368)

7e-78

237) A11S_2095
( YP_007643514.1 )

Integrase

NC_020812
(Micavibrio aeruginosavorus EPB)

9e-78

238) E2348C_2486
( YP_002329990.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

1e-77

239) APECO1_4218
( YP_853449.1 )

phage integrase

NC_008563
(Escherichia coli APEC O1)

2e-77

240) EcDH1_1309
( YP_006091271.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

2e-77

241) intS
( YP_006129687.1 )

prophage integrase

NC_017638
(Escherichia coli DH1)

2e-77

242) ECOK1_2630
( YP_006101776.1 )

phage integrase family protein

NC_017628
(Escherichia coli IHE3034)

2e-77

243) intS
( YP_001731284.1 )

CPS-53 (KpLE1) prophage; prophage CPS-53 integrase

NC_010473
(Escherichia coli K-12)

2e-77

244) intS
( YP_002927317.1 )

CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase

NC_012759
(Escherichia coli K-12)

2e-77

245) intS
( YP_490590.1 )

prophage CPS-53 integrase

NC_007779
(Escherichia coli K-12)

2e-77

246) intS
( NP_416850.1 )

CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase

NC_000913
(Escherichia coli K12)

2e-77

247) intS_2
( YP_008572328.1 )

Putative prophage CPS-53 integrase

NC_022370
(Escherichia coli PMV-1)

2e-77

248) intS
( YP_002392173.1 )

prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011742
(Escherichia coli S88)

2e-77

249) UM146_05080
( YP_006109933.1 )

CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase

NC_017632
(Escherichia coli UM146)

2e-77

250) intC
( YP_541631.1 )

prophage integrase

NC_007946
(Escherichia coli UTI89)

2e-77

251) GBP346_A3075
( YP_002897757.1 )

integrase

NC_012695
(Burkholderia pseudomallei MSHR346)

2e-77

252) Ent638_0463
( YP_001175202.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

2e-77

253) Galf_2041
( YP_003847811.1 )

integrase family protein

NC_014394
(Gallionella capsiferriformans ES-2)

3e-77

254) APECO78_02320
( YP_007379647.1 )

phage integrase family site specific recombinase

NC_020163
(Escherichia coli APEC O78)

3e-77

255) CE10_5017
( YP_006146968.1 )

phage integrase family site specific recombinase

NC_017646
(Escherichia coli CE10)

3e-77

256) Varpa_2722
( YP_004155031.1 )

integrase family protein

NC_014931
(Variovorax paradoxus EPS)

3e-77

257) intS
( YP_003500406.1 )

prophage integrase

NC_013941
(Escherichia coli CB9615)

4e-77

258) ECO55CA74_14300
( YP_006159989.1 )

prophage integrase

NC_017656
(Escherichia coli RM12579)

4e-77

259) SARI_03312
( YP_001572286.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

4e-77

260) EAE_09085
( YP_004592016.1 )

prothage integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

1e-76

261) c3556
( NP_755431.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

1e-76

262) SSON53_14055
( YP_005457328.1 )

prophage Sf6-like integrase

NC_016822
(Shigella sonnei 53G)

7e-77

263) intC
( YP_311283.1 )

prophage Sf6-like integrase

NC_007384
(Shigella sonnei Ss046)

7e-77

264) A11S_1005
( YP_007642445.1 )

phage integrase

NC_020812
(Micavibrio aeruginosavorus EPB)

7e-77

265) ECO111_5079
( YP_003237359.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

8e-77

266) ECO26_4069
( YP_003230994.1 )

integrase

NC_013361
(Escherichia coli 11368)

8e-77

267) ECO26_5300
( YP_003232178.1 )

integrase

NC_013361
(Escherichia coli 11368)

8e-77

268) ECO103_3550
( YP_003223418.1 )

integrase

NC_013353
(Escherichia coli 12009)

8e-77

269) ECO103_4929
( YP_003224745.1 )

integrase

NC_013353
(Escherichia coli 12009)

8e-77

270) E2348C_3220
( YP_002330696.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

8e-77

271) EC042_3174
( YP_006097466.1 )

integrase

NC_017626
(Escherichia coli 042)

2e-76

272) EC042_4610
( YP_006098876.1 )

integrase

NC_017626
(Escherichia coli 042)

2e-76

273) O3M_04655
( YP_006768605.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

2e-76

274) O3O_21040
( YP_006782711.1 )

Prophage integrase

NC_018661
(Escherichia coli 2009EL-2071)

2e-76

275) O3K_04610
( YP_006777642.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

2e-76

276) int
( YP_002404232.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

2e-76

277) EcolC_0747
( YP_001723746.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

2e-76

278) UMNK88_3667
( YP_006135366.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

2e-76

279) EcolC_3878
( YP_001726809.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

2e-76

280) c5216
( NP_757064.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

2e-76

281) Dd586_0394
( YP_003331995.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

3e-76

282) ROD_50201
( YP_003368377.1 )

integrase

NC_013716
(Citrobacter rodentium ICC168)

3e-76

283) ECP_2962
( YP_670846.1 )

P4-type integrase

NC_008253
(Escherichia coli 536)

3e-76

284) ECABU_c32560
( YP_006107255.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

3e-76

285) int
( YP_859807.1 )

Int ( P4-type integrase)

NC_008563
(Escherichia coli APEC O1)

3e-76

286) CE10_3417
( YP_006145430.1 )

integrase

NC_017646
(Escherichia coli CE10)

3e-76

287) i14_3273
( YP_006155358.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

3e-76

288) i02_3273
( YP_006150439.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

3e-76

289) EcE24377A_3314
( YP_001464322.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

3e-76

290) int
( YP_002400684.1 )

Prophage integrase

NC_011745
(Escherichia coli ED1a)

3e-76

291) int
( YP_006141472.1 )

Integrase

NC_017644
(Escherichia coli NA114)

3e-76

292) ECS88_4720
( YP_002394207.1 )

integrase

NC_011742
(Escherichia coli S88)

3e-76

293) intB
( YP_007493033.1 )

putative prophage P4 integrase

NC_020409
(Desulfovibrio piezophilus C1TLV30)

4e-76

294) APECO1_3534
( YP_854214.1 )

P4-like integrase

NC_008563
(Escherichia coli APEC O1)

4e-76

295) intB
( YP_003501106.1 )

Site-specific recombinase, phage integrase family protein

NC_013941
(Escherichia coli CB9615)

4e-76

296) CE10_4872
( YP_006146828.1 )

Prophage integrase

NC_017646
(Escherichia coli CE10)

4e-76

297) ECH74115_4272
( YP_002272448.1 )

site-specific recombinase, phage integrase family protein

NC_011353
(Escherichia coli EC4115)

4e-76

298) Z4313
( NP_289539.1 )

pathogenicity island integrase

NC_002655
(Escherichia coli EDL933)

4e-76

299) ECO55CA74_17295
( YP_006160577.1 )

Site-specific recombinase, phage integrase family protein

NC_017656
(Escherichia coli RM12579)

4e-76

300) int
( YP_002392871.1 )

Prophage integrase

NC_011742
(Escherichia coli S88)

4e-76

301) ECs3843
( NP_311870.1 )

integrase

NC_002695
(Escherichia coli Sakai)

4e-76

302) ECSP_3940
( YP_003079757.1 )

pathogenicity island integrase

NC_013008
(Escherichia coli TW14359)

4e-76

303) CDCO157_3594
( YP_006314460.1 )

integrase

NC_017906
(Escherichia coli Xuzhou21)

4e-76

304) ECED1_3430
( YP_002399303.1 )

integrase

NC_011745
(Escherichia coli ED1a)

5e-76

305) int
( YP_002409310.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

6e-76

306) GM18_2884
( YP_004199604.1 )

integrase family protein

NC_014973
(Geobacter sp. M18)

7e-76

307) Tbd_0943
( YP_314701.1 )

integrase prophage protein

NC_007404
(Thiobacillus denitrificans ATCC 25259)

8e-76

308) int
( YP_002410463.1 )

Prophage integrase

NC_011750
(Escherichia coli IAI39)

9e-76

309) EAM_3037
( YP_003540101.1 )

integrase

NC_013971
(Erwinia amylovora ATCC 49946)

1e-75

310) intB
( YP_003529741.1 )

integrase

NC_013961
(Erwinia amylovora CFBP1430)

1e-75

311) ECUMN_3322
( YP_002414004.1 )

integrase

NC_011751
(Escherichia coli UMN026)

2e-75

312) ECA2879
( YP_050970.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-75

313) Dd586_3778
( YP_003335314.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

4e-75

314) CFSAN001992_11535
( YP_007472047.1 )

phage integrase family site-specific recombinase

NC_020307
(Salmonella enterica CFSAN001992)

5e-75

315) EcolC_1237
( YP_001724230.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

6e-75

316) S70_13465
( YP_006217222.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

7e-75

317) Ppro_2300
( YP_901965.1 )

phage integrase family protein

NC_008609
(Pelobacter propionicus DSM 2379)

1e-74

318) S70_06120
( YP_006215787.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

8e-75

319) intB
( YP_004950346.1 )

prophage P4 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

2e-74

320) EKO11_4021
( YP_005279654.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-74

321) KO11_23100
( YP_006166928.1 )

site-specific recombinase, phage integrase family protein

NC_017660
(Escherichia coli KO11FL)

2e-74

322) LY180_22530
( YP_008567507.1 )

integrase

NC_022364
(Escherichia coli LY180)

2e-74

323) ECW_m4652
( YP_006127166.1 )

putative P4-type integrase

NC_017635
(Escherichia coli W)

2e-74

324) WFL_22655
( YP_006175953.1 )

site-specific recombinase, phage integrase family protein

NC_017664
(Escherichia coli W)

2e-74

325) ECO111_3718
( YP_003236059.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

3e-74

326) Despr_0274
( YP_004193749.1 )

integrase family protein

NC_014972
(Desulfobulbus propionicus DSM 2032)

4e-74

327) ECO103_5061
( YP_003224874.1 )

integrase

NC_013353
(Escherichia coli 12009)

6e-74

328) intA_4
( YP_008574436.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

6e-74

329) Dda3937_03406
( YP_003881783.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

1e-73

330) SEEB0189_19950
( YP_008310270.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

1e-73

331) Dd586_0881
( YP_003332472.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

7e-74

332) EC042_4741
( YP_006098991.1 )

integrase

NC_017626
(Escherichia coli 042)

7e-74

333) Ser39006_0951
( YP_008521333.1 )

protein of unknown function DUF4102

NC_022268
(Serratia sp. ATCC 39006)

8e-74

334) Mpe_A1087
( YP_001020283.1 )

prophage CP4-like integrase

NC_008825
(Methylibium petroleiphilum PM1)

1e-73

335) NH8B_1979
( YP_004847208.1 )

phage integrase family protein

NC_016002
(Pseudogulbenkiania sp. NH8B)

2e-73

336) Entcl_3878
( YP_003943402.1 )

integrase family protein

NC_014618
(Enterobacter cloacae SCF1)

2e-73

337) ENC_43890
( YP_007847599.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

2e-73

338) O3M_22875
( YP_006772189.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

3e-73

339) O3K_22970
( YP_006781250.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

3e-73

340) int
( YP_002405550.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

3e-73

341) SFxv_3245
( YP_005728584.1 )

Site-specific recombinase, phage integrase family protein

NC_017328
(Shigella flexneri 2002017)

3e-73

342) S4822
( NP_838459.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

3e-73

343) SF2964
( NP_708738.1 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

3e-73

344) SSPA3984
( YP_002144818.1 )

integrase

NC_011147
(Salmonella enterica AKU12601)

3e-73

345) int
( YP_153333.1 )

integrase

NC_006511
(Salmonella enterica ATCC 9150)

3e-73

346) Cpha266_1627
( YP_912072.1 )

phage integrase family protein

NC_008639
(Chlorobium phaeobacteroides DSM 266)

4e-73

347) RSc1871
( NP_519992.1 )

integrase prophage protein

NC_003295
(Ralstonia solanacearum GMI1000)

4e-73

348) SbBS512_E4814
( YP_001882951.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

5e-73

349) PSTAB_3439
( YP_004715809.1 )

putative phage integrase

NC_015740
(Pseudomonas stutzeri ATCC 17588)

5e-73

350) PC1_0871
( YP_003016457.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

5e-73

351) SPAB_03412
( YP_001589593.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

5e-73

352) intZ
( YP_002927401.1 )

CPZ-55 prophage; putative integrase

NC_012759
(Escherichia coli K-12)

6e-73

353) intZ
( NP_416937.2 )

CPZ-55 prophage; predicted integrase

NC_000913
(Escherichia coli K12)

6e-73

354) EKO11_4043
( YP_005279675.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

7e-73

355) KO11_22995
( YP_006166907.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

7e-73

356) LY180_22420
( YP_008567485.1 )

integrase

NC_022364
(Escherichia coli LY180)

7e-73

357) WFL_22550
( YP_006175932.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

7e-73

358) intZ
( YP_001731371.1 )

CPZ-55 prophage; integrase

NC_010473
(Escherichia coli K-12)

9e-73

359) ECOK1_4788
( YP_006103840.1 )

site-specific recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

9e-73

360) KPHS_05400
( YP_005224840.1 )

putative P4-type integrase

NC_016845
(Klebsiella pneumoniae HS11286)

1e-72

361) N559_4601
( YP_008427480.1 )

P4-type integrase

NC_022082
(Klebsiella pneumoniae JM45)

1e-72

362) NH8B_1001
( YP_004846247.1 )

prophage CP4-like integrase

NC_016002
(Pseudogulbenkiania sp. NH8B)

1e-72

363) STY4821
( NP_458899.1 )

integrase

NC_003198
(Salmonella enterica CT18)

1e-72

364) t4518
( NP_808103.1 )

integrase

NC_004631
(Salmonella enterica Ty2)

1e-72

365) TY21A_22985
( YP_007928753.1 )

integrase

NC_021176
(Salmonella enterica Ty21a)

1e-72

366) ETAC_14745
( YP_007630430.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

2e-72

367) PCA10_49420
( YP_008105279.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

2e-72

368) int
( YP_002389727.1 )

Prophage integrase

NC_011741
(Escherichia coli IAI1)

2e-72

369) intB
( YP_049780.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-72

370) A458_03985
( YP_006456472.1 )

putative phage integrase

NC_018028
(Pseudomonas stutzeri CCUG 29243)

2e-72

371) KOX_09480
( YP_005017861.1 )

phage integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

2e-72

372) Y11_15011
( YP_006005000.1 )

integrase

NC_017564
(Yersinia enterocolitica Y11)

3e-72

373) W5S_1543
( YP_006282507.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

4e-72

374) ETAE_3092
( YP_003297134.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

4e-72

375) GM18_2022
( YP_004198761.1 )

integrase family protein

NC_014973
(Geobacter sp. M18)

4e-72

376) Pecwa_1766
( YP_003259159.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-72

377) SNSL254_A4836
( YP_002043726.1 )

integrase

NC_011080
(Salmonella enterica SL254)

4e-72

378) intB
( YP_002405686.1 )

integrase; KpLE2 phage-like element

NC_011748
(Escherichia coli 55989)

5e-72

379) ECO26_5435
( YP_003232308.1 )

integrase

NC_013361
(Escherichia coli 11368)

5e-72

380) Pecwa_0718
( YP_003258145.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

6e-72

381) SN31241_8570
( YP_008358775.1 )

Integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

6e-72

382) RCFBP_11461
( YP_003745377.1 )

prophage integrase

NC_014307
(Ralstonia solanacearum CFBP2957)

1e-71

383) CKO_03532
( YP_001455048.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

1e-71

384) intB
( YP_050980.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-71

385) Alide2_0433
( YP_004386371.1 )

integrase family protein

NC_015422
(Alicycliphilus denitrificans K601)

2e-71

386) ECENHK_02620
( YP_006577041.1 )

phage integrase family site-specific recombinase

NC_018405
(Enterobacter cloacae ENHKU01)

2e-71

387) NMBM01240355_1501
( YP_005902124.1 )

Prophage CP4-57 integrase

NC_017517
(Neisseria meningitidis M01-240355)

2e-71

388) Nit79A3_1833
( YP_004695037.1 )

integrase

NC_015731
(Nitrosomonas sp. Is79A3)

2e-71

389) EBL_c34780
( YP_006321045.1 )

prophage P4 integrase

NC_017910
(Escherichia blattae DSM 4481)

3e-71

390) Ser39006_3432
( YP_008523814.1 )

integrase family protein

NC_022268
(Serratia sp. ATCC 39006)

4e-71

391) Dsui_0218
( YP_005026479.1 )

Integrase

NC_016616
(Dechlorosoma suillum PS)

6e-71

392) A225_0566
( YP_006496338.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

6e-71

393) EcDH1_3727
( YP_006093621.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

1e-70

394) intB
( YP_006131525.1 )

site-specific recombinase

NC_017638
(Escherichia coli DH1)

1e-70

395) intB
( YP_001733029.1 )

KpLE2 phage-like element; integrase

NC_010473
(Escherichia coli K-12)

1e-70

396) intB
( YP_492408.1 )

integrase

NC_007779
(Escherichia coli K-12)

1e-70

397) intB
( YP_002415396.1 )

putative integrase; KpLE2 phage-like element

NC_011751
(Escherichia coli UMN026)

1e-70

398) ETAF_2789
( YP_005700383.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

1e-70

399) ECO55CA74_24440
( YP_006161977.1 )

Prophage integrase

NC_017656
(Escherichia coli RM12579)

1e-70

400) PFLU5281
( YP_002874783.1 )

putative phage integrase

NC_012660
(Pseudomonas fluorescens SBW25)

1e-70

401) PAGR_g3659
( YP_005994368.1 )

integrase

NC_017554
(Pantoea ananatis PA13)

7e-71

402) H650_18115
( YP_008109377.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

8e-71

403) NMV_0809
( YP_005878233.1 )

putative prophage integrase

NC_017501
(Neisseria meningitidis 8013)

9e-71

404) Pecwa_1669
( YP_003259066.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

9e-71

405) SMD_1781
( YP_006184502.1 )

integrase

NC_017671
(Stenotrophomonas maltophilia D457)

9e-71

406) ETEC_4611
( YP_006118149.1 )

putative phage integrase

NC_017633
(Escherichia coli ETEC H10407)

1e-70

407) intB
( YP_002410602.1 )

putative integrase; KpLE2 phage-like element

NC_011750
(Escherichia coli IAI39)

1e-70

408) Fraau_3064
( YP_005379074.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

2e-70

409) intB
( YP_003001820.1 )

intB

NC_012892
(Escherichia coli BL21(DE3))

2e-70

410) intB
( YP_003056695.1 )

integrase

NC_012971
(Escherichia coli BL21(DE3))

2e-70

411) intB
( YP_002400869.1 )

putative integrase; KpLE2 phage-like element

NC_011745
(Escherichia coli ED1a)

2e-70

412) ECBD_3766
( YP_003037938.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

2e-70

413) intB
( YP_006171360.1 )

Prophage P4 integrase (Int(P4))

NC_017663
(Escherichia coli P12b)

2e-70

414) intB
( YP_003047305.1 )

putative integrase

NC_012967
(Escherichia coli REL606)

2e-70

415) YSA_03449
( YP_006385748.1 )

putative phage integrase

NC_017986
(Pseudomonas putida ND6)

2e-70

416) Nmul_A2184
( YP_412868.1 )

Phage integrase

NC_007614
(Nitrosospira multiformis ATCC 25196)

3e-70

417) SPC_4619
( YP_002640109.1 )

integrase

NC_012125
(Salmonella enterica RKS4594)

3e-70

418) ETEC_4481
( YP_006118020.1 )

KpLE2 phage-like element; predicted integrase

NC_017633
(Escherichia coli ETEC H10407)

4e-70

419) ETEC_3157
( YP_006116702.1 )

phage integrase

NC_017633
(Escherichia coli ETEC H10407)

6e-70

420) YpsIP31758_0809
( YP_001399793.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

6e-70

421) amb0488
( YP_419851.1 )

integrase

NC_007626
(Magnetospirillum magneticum AMB-1)

7e-70

422) YpsIP31758_3540
( YP_001402494.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

8e-70

423) A1122_08715
( YP_005521414.1 )

integrase

NC_017168
(Yersinia pestis A1122)

2e-69

424) YpAngola_A4051
( YP_001608341.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

2e-69

425) YPA_2939
( YP_652846.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

2e-69

426) intB
( YP_002348329.1 )

integrase

NC_003143
(Yersinia pestis CO92)

2e-69

427) intB
( YP_005506227.1 )

integrase

NC_017154
(Yersinia pestis D106004)

2e-69

428) intB
( YP_005510085.1 )

integrase

NC_017160
(Yersinia pestis D182038)

2e-69

429) YPN_0651
( YP_646583.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

2e-69

430) intB
( YP_003569204.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

2e-69

431) intB
( NP_992037.1 )

integrase

NC_005810
(Yersinia pestis 91001)

3e-69

432) intB
( NP_668085.1 )

integrase

NC_004088
(Yersinia pestis KIM)

3e-69

433) Dd1591_3702
( YP_003005986.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

6e-69

434) YPDSF_3248
( YP_001164578.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

1e-68

435) YPK_3676
( YP_001722396.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

1e-68

436) GM21_0997
( YP_003020820.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

1e-68

437) G432_12985
( YP_007616912.1 )

symbiosis island integrase

NC_020561
(Sphingomonas sp. MM-1)

1e-68

438) Acry_2428
( YP_001235540.1 )

phage integrase family protein

NC_009484
(Acidiphilium cryptum JF-5)

9e-69

439) Dsui_1791
( YP_005028016.1 )

Integrase

NC_016616
(Dechlorosoma suillum PS)

2e-68

440) YE105_C1329
( YP_004297528.1 )

putative cp4-like integrase protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-68

441) intB
( YP_005625501.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

2e-68

442) KPK_1811
( YP_002237656.1 )

integrase

NC_011283
(Klebsiella pneumoniae 342)

2e-68

443) NAL212_2545
( YP_004295511.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

3e-68

444) Pput_3353
( YP_001268663.1 )

phage integrase family protein

NC_009512
(Pseudomonas putida F1)

4e-68

445) Dd703_3541
( YP_002989121.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

6e-68

446) int
( YP_004730693.1 )

bacteriophage integrase

NC_015761
(Salmonella bongori NCTC 12419)

1e-67

447) PAU_03981
( YP_003042810.1 )

p4 integrase-like protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-67

448) Dd586_1478
( YP_003333051.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

3e-67

449) SFxv_4606
( YP_005729812.1 )

putative P4-type integrase

NC_017328
(Shigella flexneri 2002017)

3e-67

450) S4839
( NP_839619.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

3e-67

451) SF4224
( NP_709936.2 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

3e-67

452) THI_2314
( YP_003624766.1 )

putative Phage integrase

NC_014145
(Thiomonas sp. 3As)

3e-67

453) MU9_135
( YP_007503554.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

4e-67

454) Dda3937_00080
( YP_003883684.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

4e-67

455) CFSAN002050_16945
( YP_008261284.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

4e-67

456) SARI_03082
( YP_001572064.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

4e-67

457) SFV_4227
( YP_691515.1 )

P4-type integrase

NC_008258
(Shigella flexneri 8401)

4e-67

458) ELI_09990
( YP_458887.1 )

symbiosis island integrase

NC_007722
(Erythrobacter litoralis HTCC2594)

6e-67

459) intB
( YP_410419.1 )

prophage P4 integrase

NC_007613
(Shigella boydii Sb227)

6e-67

460) Rahaq2_2006
( YP_005200009.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

2e-66

461) intB
( YP_002153152.1 )

prophage integrase

NC_010554
(Proteus mirabilis HI4320)

3e-66

462) KPK_4978
( YP_002240755.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

3e-66

463) Niako_6128
( YP_005011756.1 )

integrase family protein

NC_016609
(Niastella koreensis GR20-10)

3e-66

464) Rvan_1263
( YP_004011624.1 )

integrase family protein

NC_014664
(Rhodomicrobium vannielii ATCC 17100)

4e-66

465) Tint_0383
( YP_003642124.1 )

integrase family protein

NC_014153
(Thiomonas intermedia K12)

6e-66

466) ECABU_c49370
( YP_006108845.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

2e-65

467) SBO_4174
( YP_410429.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

3e-65

468) MU9_117
( YP_007503536.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

1e-64

469) EBL_c09420
( YP_006318568.1 )

putative phage integrase

NC_017910
(Escherichia blattae DSM 4481)

1e-64

470) c5371
( NP_757219.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

6e-65

471) i14_4891
( YP_006156950.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

6e-65

472) i02_4891
( YP_006152031.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

6e-65

473) PSPA7_5324
( YP_001350655.1 )

integrase

NC_009656
(Pseudomonas aeruginosa PA7)

7e-65

474) UMN798_2960
( YP_005398107.1 )

bacteriophage integrase

NC_017046
(Salmonella enterica 798)

9e-65

475) SL1344_2712
( YP_005182607.1 )

bacteriophage integrase

NC_016810
(Salmonella enterica SL1344)

9e-65

476) STM474_2864
( YP_005243712.1 )

site-specific recombinase, phage integrase family

NC_016857
(Salmonella enterica ST4/74)

9e-65

477) Glov_3112
( YP_001953338.1 )

integrase

NC_010814
(Geobacter lovleyi SZ)

2e-64

478) CFSAN001992_19740
( YP_007473660.1 )

phage integrase family protein

NC_020307
(Salmonella enterica CFSAN001992)

2e-64

479) SNSL254_A2952
( YP_002041998.1 )

phage integrase family protein

NC_011080
(Salmonella enterica SL254)

2e-64

480) SN31241_38450
( YP_008361760.1 )

Prophage CP4-57 integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-64

481) Tbd_2005
( YP_315763.1 )

cp4-like integrase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

2e-64

482) Dd703_3554
( YP_002989134.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

3e-64

483) mll6432
( NP_106945.1 )

symbiosis island integrase

NC_002678
(Mesorhizobium loti MAFF303099)

4e-64

484) Pecwa_0447
( YP_003257894.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-64

485) ETAE_2742
( YP_003296788.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

5e-64

486) BN69_1891
( YP_006591993.1 )

Phage integrase family protein

NC_018485
(Methylocystis sp. SC2)

5e-64

487) Rahaq2_2650
( YP_005200640.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-63

488) W5S_0459
( YP_006281457.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

7e-64

489) Dd1591_1514
( YP_003003849.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

1e-63

490) Xaut_2233
( YP_001417134.1 )

integrase family protein

NC_009720
(Xanthobacter autotrophicus Py2)

2e-63

491) SLG_29060
( YP_004836038.1 )

putative integrase

NC_015976
(Sphingobium sp. SYK-6)

2e-63

492) SbBS512_E4662
( YP_001882825.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

2e-63

493) SSON53_18230
( YP_005458150.1 )

P4-type integrase

NC_016822
(Shigella sonnei 53G)

2e-63

494) SBO_1221
( YP_407678.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

3e-63

495) Nham_0294
( YP_575650.1 )

phage integrase

NC_007964
(Nitrobacter hamburgensis X14)

4e-63

496) Veis_2767
( YP_997525.1 )

phage integrase family protein

NC_008786
(Verminephrobacter eiseniae EF01-2)

4e-63

497) LPO_0155
( YP_006504236.1 )

Integrase

NC_018139
(Legionella pneumophila Lorraine)

5e-63

498) Mesau_02378
( YP_007304184.1 )

Integrase

NC_019973
(Mesorhizobium australicum WSM2073)

6e-63

499) Mesci_2349
( YP_004141546.1 )

integrase family protein

NC_014923
(Mesorhizobium ciceri WSM1271)

6e-63

500) Mesop_2493
( YP_004611061.1 )

integrase family protein

NC_015675
(Mesorhizobium opportunistum WSM2075)

6e-63

501) Alide_1445
( YP_004126093.1 )

integrase family protein

NC_014910
(Alicycliphilus denitrificans BC)

8e-63

502) Pecwa_1693
( YP_003259087.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

8e-63

503) Rahaq2_1748
( YP_005199761.1 )

Integrase

NC_016818
(Rahnella aquatilis CIP 78.65)

1e-62

504) SBO_4322
( YP_410566.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

9e-63

505) LFML04_0012
( YP_006765226.1 )

phage integrase family protein

NC_018649
(Leptospirillum ferriphilum ML-04)

2e-62

506) EJP617_01070
( YP_005816675.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

2e-62

507) Fraau_1988
( YP_005378057.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

2e-62

508) W5S_1636
( YP_006282600.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

2e-62

509) Fraau_2605
( YP_005378631.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

4e-62

510) ECP_1962
( YP_669862.1 )

bacteriophage integrase

NC_008253
(Escherichia coli 536)

1e-61

511) ECABU_c22620
( YP_006106313.1 )

P4-like integrase

NC_017631
(Escherichia coli ABU 83972)

1e-61

512) c2449
( NP_754341.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

1e-61

513) i14_2259
( YP_006154368.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

1e-61

514) i02_2259
( YP_006149449.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

1e-61

515) ECOK1_2168
( YP_006101333.1 )

integrase/recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

1e-61

516) intA_3
( YP_008571925.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

1e-61

517) UM146_07190
( YP_006110343.1 )

bacteriophage integrase

NC_017632
(Escherichia coli UM146)

1e-61

518) UTI89_C2204
( YP_541203.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

1e-61

519) RPC_0628
( YP_530520.1 )

phage integrase

NC_007925
(Rhodopseudomonas palustris BisB18)

2e-61

520) t2647
( NP_806358.2 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

2e-61

521) TY21A_13395
( YP_007926930.1 )

integrase family protein

NC_021176
(Salmonella enterica Ty21a)

2e-61

522) Msil_1557
( YP_002361869.1 )

integrase family protein

NC_011666
(Methylocella silvestris BL2)

6e-60

523) RORB6_03735
( YP_007872993.1 )

phage integrase

NC_021066
(Raoultella ornithinolytica B6)

1e-59

524) PAU_03975
( YP_003042804.1 )

prophage p4 integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-59

525) XALc_1804
( YP_003376288.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

4e-59

526) XCV2217
( YP_363948.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

1e-57

527) PFL_4977
( YP_262056.1 )

phage integrase family site-specific recombinase

NC_004129
(Pseudomonas protegens Pf-5)

5e-57

528) SBOV27691
( YP_008506597.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

7e-57

529) MCA0676
( YP_113189.1 )

phage integrase site specific recombinase

NC_002977
(Methylococcus capsulatus Bath)

1e-55

530) ybl123
( YP_003000524.1 )

ybl123

NC_012892
(Escherichia coli BL21(DE3))

2e-55

531) PFLU1878
( YP_002871513.1 )

putative integrase

NC_012660
(Pseudomonas fluorescens SBW25)

3e-55

532) XALc_1632
( YP_003376121.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

1e-54

533) ETA_03770
( YP_001906331.1 )

P4-type integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-54

534) MICA_2176
( YP_004866484.1 )

phage integrase family protein

NC_016026
(Micavibrio aeruginosavorus ARL-13)

2e-53

535) UMNK88_5213
( YP_006136842.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

2e-53

536) GbCGDNIH1_1802
( YP_745623.1 )

DNA integration/recombination/inversion protein

NC_008343
(Granulibacter bethesdensis CGDNIH1)

5e-49

537) PSJM300_10880
( YP_006524598.1 )

integrase

NC_018177
(Pseudomonas stutzeri DSM 10701)

3e-48

• Sequence Alignments

1) EcE24377A_3377 in NC_009801


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  599 bits (2261),  Expect = 1e-172, Method: Compositional matrix adjust.
 Identities = 386/392 (99%), Positives = 389/392 (99%), Gaps = 0/392 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDIS  60
            MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYT  120
            LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
            RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQ TDIL QLKTFSGQYRLVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSIQ  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS Q
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

2) EcSMS35_3112 in NC_010498


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  599 bits (2262),  Expect = 9e-173, Method: Compositional matrix adjust.
 Identities = 388/392 (99%), Positives = 389/392 (99%), Gaps = 0/392 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
            RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQ TDIL QLKTFSGQYRLVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSIQ  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS Q
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

3) SeHA_C4738 in NC_011083


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  597 bits (2255),  Expect = 3e-172, Method: Compositional matrix adjust.
 Identities = 387/394 (99%), Positives = 389/394 (99%), Gaps = 0/394 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
            RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQ TDIL QLKTFSGQYRLVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSLSRQES  394
            +IRGTYNHA Y+DGRREMMQWYADYIDSLS Q S
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

4) SN31241_7100 in NC_021902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  596 bits (2250),  Expect = 7e-172, Method: Compositional matrix adjust.
 Identities = 386/394 (98%), Positives = 389/394 (99%), Gaps = 0/394 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
            RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQTTDILLQLKTFSGQYQLVFP  300
            RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQ TDIL QLKTFSGQY+LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSLSRQES  394
            +IRGTYNHA Y+DGRREMMQWYADYIDSLS Q S
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

5) W5S_1285 in NC_017845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  467 bits (1761),  Expect = 4e-133, Method: Compositional matrix adjust.
 Identities = 259/391 (67%), Positives = 338/391 (87%), Gaps = 0/391 (0%)

Query  1    MPLNARQIETAKPQDTEYKLTDGAGLYLLIKPNGAKYWRLKYRVAGKEKKLSIGVYPDIS  60
            M+L ARQ+ETA+P++ +YKL+D  GLYLL+K  GA+YWRLKYR+AGKEKKL++GVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARLKREEARKIVASGGDPSEQKQVERQAKKISIDNTFKAIALEWHEYKRPNWSKGYA  120
            LAEAR+KR++ARKI++ GGDP+E+K+ E+ ++KIS  NTF A+A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR++++I PLEML  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPDFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA  NPASEL+S+L++PKA+H+PHL +DELP FLR L+ Y GS VT++AT +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RTIELR AEW E+DF+++LW +P  RMKMRR H+VPLS QV D LQQL++ +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFIDGLEH  391
            +IRGTYNHA Y++ RR M+QWY+D+ID+L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

6) ETAC_13020 in NC_020796


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 246/391 (63%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVEASKAKDKPYKLADGGGLYLLVNPNGTKYWRLKYRVAGKEKLLAVGVYPNVT  60
            M L ARQVE++++K+K YKL+D  GLYLLV+  G++YWRLKYR+AGKEK LA+GVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVKREDAKRVLAAGGDPGQEKQEEKRAKVMAVTNSFEKLAREWHEHKRPTWSKGYA  120
            LA+AR+KR+DA+++++ GGDPG+ K+ EK ++ ++ TN+F+ LA EWH+HK  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDILEYLRKDIFPYIGKRAITDIKPMDMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
              +LE L KDIFPY+GKR++TDI P++ML +LR++E+RG L+KL+K RQ C QIF YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEHNPVVDLASALKTPKQKHFPHLMADQLGEFLRALADYSGSRVTQNATRLLMLTGV  240
            TGRA  NP  +L+S+L +PK  HFPHL AD+L  FLR LA+Y GS VT+ AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTVELRAAEWAEVDLDLSLWQIPPERMKMRRPHIVPLSEQALAIMQEMRRISGKGKYIFP  300
            RT+ELR+AEW+E+D+D +LW IP  RMKMRR H+VPLS Q   I+Q+++ +SG+ + +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDAGKPMSEASINQVIKRIGYDGKATGHGFRHTMSTILHEQGYNTAWVETQLAHADKN  360
            GR D  KPMSEASIN V+KRIGYDG+ATGHGFRHTMSTILHEQG+N+AW+E QLAH DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYLDALAN  391
            SIRGTYNHA Y+DGRREM+QWYADY+D+L++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

7) int in NC_010694


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  465 bits (1754),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 247/390 (64%), Positives = 320/390 (83%), Gaps = 0/390 (0%)

Query  1    MKLNARQVDTARGKDKPYKLADGGGLYLLVNPNGARYWRLKYRAAGKEKLLAVGVYPDVS  60
            M L ARQV+TAR K+K YKL+D  GLYLLV+  GARYWRLKYR AGKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARRRRDEAKKILAAGGDPGQEKQAEKQSKILAVQNSFEAIALEWHEHKKTNWSEGYA  120
            L++AR +RD+A+KI++ GGDPG+ K+ EK ++ ++  N+F+A+A EWH+HK  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  TDILEYLSKDIFPFVGKRAINEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTHAVI  180
              +LE L KDIFP++GKR++ +I P EML +LR++E+RG L+KL+K RQ C QIF  A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAENNPVTDLAGALKAPKQKHFPHLNVDQIPPFLNDLSNYSGSMITRYATQLLMITGL  240
            TGRA  NP ++L+++L APK  HFPHL  D++P FL  L++Y GS +TR AT+LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRASEWSDIDFDKGIWQIPAERMKMRRPHIVPISSQAKSLLEAIHQLTGRGKYVFP  300
            RTIELR++EWS+IDFD+++W IP  RMKMRR H+VP+S Q   +L+ +  ++G+ + VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDAGKPMSEASINQVIKRIGYDGKATGHGFRHTMSTILHEQGYNSAWVETQLAHVDKN  360
            GR D  KPMSEASIN V+KRIGYDG+ATGHGFRHTMSTILHEQG+NSAW+E QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDALE  390
            SIRGTYNHA Y+DGRREM+QWYADY+D+L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

8) YPK_3149 in NC_010465


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  460 bits (1733),  Expect = 6e-131, Method: Compositional matrix adjust.
 Identities = 239/392 (61%), Positives = 328/392 (84%), Gaps = 0/392 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALG+YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKATVENTFKAIALEWHEYKRPNWSKGYA  120
            L+EAR +RD+A++ ++++ DP+E+K+ EK ++K +  NTF A+A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR++++I PLE+L  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAESNPASELASALTPPKSVHYPHLLADELPAFLEALAAYSGSPITRLATKILMLTGV  240
            TGRA  NPASEL+S+L++PK+ H+PHL ADELP FL  LA Y GSP+TR+AT++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRMAEWKEFDFDQRVWEVPVQRMKMRRPHLVPLSDQVVTALREIQAVTGRYNLVFP  300
            RTIELR AEW E+DFD+ +W +P  RMKMRR H+VPLS QV   L+++++ +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRREMLQWYGEYVDGLAAR  392
            +IRGTYNHA Y++ RREM+QWY++Y+D+L+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

9) M621_05660 in NC_021659


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  455 bits (1713),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 238/390 (62%), Positives = 325/390 (84%), Gaps = 0/390 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALG+YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKATVENTFKAIALEWHEYKRPNWSKGYA  120
            L+EAR +RD+A++ ++++ DP+E+K+ EK ++K +  NTF A+A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR++++I PLE+L  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAETNPASELASALTPPKSVHYPHLLADDFPAFLQALATYSGSPITRLATKILMLTGV  240
            TGRA  NPASEL+S+L++PK+ H+PHL AD++P FL+ LA Y GSP+TR+AT++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRMAEWKEFDFEKRVWEVPVERMKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFP  300
            RTIELR AEW E+DF++ +W +P  RMKMRR H+VPLS QV   L++++  +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLDQRRVMLQWYADYMDNLE  390
            +IRGTYNHA Y+D RR M+QWYADY+D+L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

10) int in NC_021591


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  455 bits (1713),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 237/390 (61%), Positives = 325/390 (84%), Gaps = 0/390 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALG+YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKAMVENTFKAIALEWHEYKRPNWSKGYA  120
            L+EAR +RD+A++ ++++ DP+E+K+ EK ++K    NTF A+A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR++++I PLE+L  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAETNPASELASALTSPKSVHYPHLLADDFPAFLQALAAYSGSPITRLATKILMLTGV  240
            TGRA  NPASEL+S+L++PK+ H+PHL AD++P FL+ LA Y GSP+TR+AT++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRMAEWKEFDFEKRVWEVPVERMKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFP  300
            RTIELR AEW E+DF++ +W +P  RMKMRR H+VPLS QV   L++++  +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRREMLQWYGDYVDNLE  390
            +IRGTYNHA Y++ RREM+QWY+DY+D+L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

11) PAU_01003 in NC_012962


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  454 bits (1712),  Expect = 3e-129, Method: Compositional matrix adjust.
 Identities = 250/390 (65%), Positives = 325/390 (84%), Gaps = 0/390 (0%)

Query  1    MKLNARQVESAKAKATDYKLADGSGLYLLVKKNGARYWRLKYRIAGKEKLLALGIYPNLS  60
            M L ARQVE+A++K  DYKL+D  GLYLLVK  GARYWRLKYRIAGKEK LALG+YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARAKRDEAKQHLANGVDPAEVKKTKQKEIIRQATNTFEAIAKEWHSYKLPNWSVGYA  120
            LA+AR KRD+A++ +++G DP+E K+  +      ATNTF+A+A EWH  K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDLLESFNKDIFPYIGKRIITDIKPLDMLETLRKMEQRGVLDKLKKIRQACSQVFKYAIV  180
              +LE+++KDIFPY+GKR +TDI PL+MLE LR++E+RG L+KL+K+RQ C+Q+F+YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRSEYNPAAELSGALASPKVKHFPHLLADELPLFLQTLSQYKGSIITQIATKLLLLTGV  240
            TGR+  NPA+EL+++LA+PK  HFPHL ADELP+FL+ L++Y GS +T++AT+LLLLTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAKWDELDLDRKIWEIPLERMKMRRTHIVPLSEQVLSLFKTLEVITGRFEFIFH  300
            RTIELR+A W E+D+D  +W IP  RMKMRR H+VPLS QV  +++ L  ++G++ ++F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEAAINQVIKRIGYGSRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D NKPMSEA+IN V+KRIGY++RATGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLE  390
            SIRGTYNHA Y+DGRREM+QWYADY+DSL 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

12) int in NC_014228


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  453 bits (1708),  Expect = 5e-129, Method: Compositional matrix adjust.
 Identities = 254/391 (65%), Positives = 320/391 (82%), Gaps = 0/391 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLADGGGLYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDIS  60
            M LTARQV+TA+PKEK YKL+D  GLYLLV+  GARYWRLKYRIAGKEK LALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARTKRNEARRTLSDGNDPIeekkaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYA  120
            LAEAR KR++AR+ +S+G DP E K+ EK ++ ++ +N+F+++A EWH+HK  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDILEYLKKDIFPYIGKRAVTEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
              +LE L KDIFPY+GKR+VT+I P EML +LR++E+RG L+KL+K RQ C QIF YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPVTDLASALKTPKQKHFPHLLADQMNEFLIALAGYSGSEVTQSATRLLMLTGV  240
            TGRA  NP ++L+S+L +PK  HFPHL AD++  FL  LA Y GS VT+ AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRESEWTEFDFDKDIWQIPAERMKMRRPHIVPLSNQVKAILIKLHSITGRGKYVFP  300
            RTIELR +EW+E+DFD+ +W IP  RMKMRR H+VPLS QV  IL +L +++G+ + VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDAGKPMSEAAINQVIKRIGYDGRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  KPMSEA+IN V+KRIGYDGRATGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYADHMEMLEH  391
            SIRGTYNHA Y++GRREM+QWYAD ++ L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

13) ECIAI39_4188 in NC_011750


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  450 bits (1695),  Expect = 6e-128, Method: Compositional matrix adjust.
 Identities = 247/392 (64%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q+IS  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

14) CE10_4227 in NC_017646


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  450 bits (1695),  Expect = 6e-128, Method: Compositional matrix adjust.
 Identities = 247/392 (64%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q+IS  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

15) O3M_00580 in NC_018650


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1691),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

16) O3O_25120 in NC_018661


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1691),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

17) O3K_00550 in NC_018658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1691),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

18) ECD_03516 in NC_012971


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

19) ybl160 in NC_012892


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

20) ECBD_0066 in NC_012947


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

21) ECB_03516 in NC_012967


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

22) intC in NC_004431


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  449 bits (1690),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 319/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

23) ECP_3765 in NC_008253


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  448 bits (1686),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 244/393 (63%), Positives = 318/393 (81%), Gaps = 0/393 (0%)

Query  1    MALTDIKVKTVKPKDKPYKLADGSGMYLLINTNGSKYWRMKYRFAGKEKMLSLGVYPDVT  60
            MALT  +V T +PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L+LGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKRSEARKILAAGGDPGEVKKEEKIALQMSLKNTFEAIAREWHRSKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWH+ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYLGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPYLGKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDINLEKKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHYPLVFI  300
            RT ELR A+W +I++++ LW IP   MKM+R H+VPLS QV  +++QL  +S +Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELIGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GR D  KP+S  SIN V+  IGY GR TGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLASQT  393
            SIRGTYNHA Y+DGRREMMQWYADYIDSL+ Q 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

24) SSON_3744 in NC_007384


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  448 bits (1687),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 246/392 (63%), Positives = 318/392 (82%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAGAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

25) A1122_00590 in NC_017168


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

26) YpAngola_A3853 in NC_010159


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

27) YPC_0922 in NC_017265


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

28) int4 in NC_005810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

29) int in NC_003143


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

30) int in NC_017154


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

31) int in NC_017160


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

32) y3271 in NC_004088


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

33) YPN_3086 in NC_008149


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

34) int in NC_014029


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

35) Dd586_2842 in NC_013592


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  445 bits (1678),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 233/391 (60%), Positives = 324/391 (83%), Gaps = 0/391 (0%)

Query  1    MALTDVKVRSAKPMDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGVYPEIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALGVYP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQVTNSIDPSEKKKVEKQARKVAVENTFKSVALEWHEYKRPNWSKGYA  120
            L+EAR +RD+A++ ++++ DP+EKK+ EK ++K++  NTF ++A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIEPLEALTTLRKLEKRGVLDKLRKVRQACKQVCTYAIV  180
              ++EA+++DIFP +GKR++++I PLE L  LR++EKRG L+KLRKVRQ C+Q+  YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKTNPFAELASALTTAKSTHYPHLLADQLPAFLKALEAYSGSPITRLATRILMLTGV  240
            TGRA  NP +EL+S+L+++K++H+PHL AD+LP FL+ L  Y GSP+TR+AT +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRLAEWKEFDFDKRVWEVPVERMKMRRPHLVPLSDQVIEALRELQMITGRYNLVFP  300
            RTIELR AEW E+DFD+ +W +P  RMKMRR H+VPLS QV + L++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPISEASINQVLKRIGYHGKATGHGFRHTMSTILHEEGFNTAWIELQLAHVDKN  360
            GR DI KP+SEASIN VLKRIGY+G+ATGHGFRHTMSTILHE+GFN+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQHLENRRGMLQWYADYLESLTN  391
            +IRGTYNHA  ++ RR M+QWYADY++SL++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

36) YPDSF_0629 in NC_009381


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1674),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 324/391 (83%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWVEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

37) YpsIP31758_0884 in NC_009708


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1674),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

38) int in NC_006155


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1674),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

39) YPTS_3293 in NC_010634


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1674),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

40) YPK_0925 in NC_010465


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1674),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L ARQVETA+PK+K YKL+D  GLYLLV+T G+RYWRLKYR+AGKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

41) intL in NC_002655


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

42) ECs4534 in NC_002695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

43) intL in NC_013008


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

44) ECO55CA74_21080 in NC_017656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

45) CDCO157_4272 in NC_017906


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

46) ETEC_3899 in NC_017633


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  444 bits (1671),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 241/389 (62%), Positives = 314/389 (81%), Gaps = 0/389 (0%)

Query  1    MALTDIKVKTAKPKEKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKEK YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGNPGVAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARKI++ GG+PG  K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLACALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+ +LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIALFKQLEPITKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  ++ +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSL  389
            +IRGTYNHA Y+DGRREMMQWYADYIDSL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

47) ECH74115_5032 in NC_011353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  443 bits (1667),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  25   MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  84
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  85   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  144
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  145  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  204
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  205  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  264
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  265  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  324
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  325  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  384
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  385  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  415
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

48) intL in NC_013941


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  443 bits (1667),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  25   MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  84
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  85   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  144
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  145  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  204
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  205  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  264
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  265  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  324
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  325  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  384
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  385  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  415
            SIRGTYNHA Y+DGRREMMQWYADYIDSLSE
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

49) intC in NC_008258


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  443 bits (1670),  Expect = 5e-126, Method: Compositional matrix adjust.
 Identities = 243/392 (62%), Positives = 317/392 (81%), Gaps = 0/392 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+ +LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQAIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN  +  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRDTYNHALYLDGRREMMQWYADYIDSLSSR  392
            SIR+TYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

50) EcHS_A0329 in NC_009800


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  443 bits (1670),  Expect = 6e-126, Method: Compositional matrix adjust.
 Identities = 241/388 (63%), Positives = 315/388 (82%), Gaps = 0/388 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L ARQV++A+P+EK YKL+D  GLYL V  +G+RYWR+KYR+ GKEK++A+GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARALRDDAKKKLAEGIDPSLAKKEEKLVRDVQLNNTFQAVALEWHGTKVSRWSEGYA  120
            LA+AR  RDDA+K ++EG DP+  K+ EKL + +   NTF+A+A EWH  K   WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIIEAFNKDIFPYIGQQPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVFRYAIV  180
              ++EA++KDIFPY+G+++V +I PL +L++LRRIE RG+ EK +KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEELPDFFKALAGYTGSPLVVLAARLLILTGV  240
            TGRA  NPA++LTS++++  + H+P L  +ELP F++ LA Y GSP+  +A+ LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVMSGQYPLVFP  300
            RT ELR+A WSE+D+++A+W IP  RMKM+R H+VPLS Q  +I+QQLK  SGQY LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY GR TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHALYLEGRREMMQWYADYINA  388
            +IRGTYNHALY++GRREMMQWYADYI++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

51) SFxv_4026 in NC_017328


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  442 bits (1665),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 316/391 (81%), Gaps = 0/391 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++   +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+L
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            A+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y  
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
             ++++++KDIFPY+GKR++++I P+ +LE LR++EKRG+LEK+RKVRQ C ++FRYAI T
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+R
Sbjct  182  GRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            T ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF G
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            R D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSSR  401
            IRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

52) S4835 in NC_004741


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  442 bits (1665),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 316/391 (81%), Gaps = 0/391 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++   +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+L
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            A+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y  
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
             ++++++KDIFPY+GKR++++I P+ +LE LR++EKRG+LEK+RKVRQ C ++FRYAI T
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+R
Sbjct  182  GRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            T ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF G
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            R D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSSR  401
            IRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

53) SF3698 in NC_004337


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  442 bits (1665),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 316/391 (81%), Gaps = 0/391 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++   +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+L
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            A+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y  
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
             ++++++KDIFPY+GKR++++I P+ +LE LR++EKRG+LEK+RKVRQ C ++FRYAI T
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+R
Sbjct  182  GRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            T ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF G
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            R D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSSR  401
            IRGTYNHALY+DGRREMMQWYADYIDSLS +
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

54) ECABU_c41260 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  440 bits (1659),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 239/392 (61%), Positives = 316/392 (81%), Gaps = 0/392 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKEK YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLTRE  392
            +IRGTYNHA Y+DGRREMMQWYADYI+SL+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

55) intC in NC_017652


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  440 bits (1659),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 239/392 (61%), Positives = 316/392 (81%), Gaps = 0/392 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKEK YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLTRE  392
            +IRGTYNHA Y+DGRREMMQWYADYI+SL+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

56) intC in NC_017651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  440 bits (1659),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 239/392 (61%), Positives = 316/392 (81%), Gaps = 0/392 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PKEK YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLTRE  392
            +IRGTYNHA Y+DGRREMMQWYADYI+SL+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

57) SeSA_A0666 in NC_011094


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  439 bits (1654),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 239/393 (61%), Positives = 315/393 (81%), Gaps = 0/393 (0%)

Query  1    MKLTARQISTAKPTEKPYKLSDGGGLYLLVNPNGSRYWRMKYRYAGKEKLLSIGVYPDVT  60
            M LTARQ+ TA+P EK YKLSD  GLYLLV+  G+RYWR+KYR AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARDKRTQAKRILAAGDDPSEVKQAEREAKNLAVNNSFELLALEWHEHKKPNWSSGYA  120
            LAEAR KR +A++I++ G+DP+E K+ E+ +++++  N+F+ LA EWH+HK  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDILEYLRKDIFPYIGKKAITDIKPMTMLSVLKKMEDRGVLDKLKKTRQACRQIFTYAII  180
              +LE L KDIFPY+GK+++TDI P+ ML +L+++E RG L+KL+K RQ C QIF YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPVTDLAGALKTPKQQHFPHLMPTQIGPFIHAVNTYSGSKVTRIATLLLMYTSV  240
            TGRA  NP ++L+++L +PK  HFPHL + ++  F++ +  Y GS VTR+AT LL+ T++
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRASEWTEFDLDNDLWQIPKERMKMRRPHLVPLSRQVKSHLLELKKITGWGKYVFP  300
            RTIELR++EW+E+D+DN LW IP  RMKMRR H+VPLSRQV   L +LK ++G  + VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDAHKPMSEASINQVIKRIGFAGKVTGHGFRHTMSTILHEKGFNSAWIEAQLAHADRN  360
            GR D +KPMSEASIN V+KRIG+ G+ TGHGFRHTMSTILHE+GFNSAWIE QLAH D+N
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLDGRREMLQWYADYLDELVGKV  393
            +IRGTYNHA Y+DGRREM+QWYADY+D L  +V
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

58) PC1_2870 in NC_012917


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  438 bits (1651),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 243/391 (63%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEIT  60
            M+LT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYA  120
            L+EAR +RD+A++ I+ G DP+E+K+ +K  ++    NTF A+A EWH+ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLMEAFENDIFPDIGKRPVAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR+V++I PLEML  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPTFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA  NPASEL+S+L++PKA+H+PHL +DELP FLR L+ Y GS VT++AT +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSAQVIDALQQLQAVTGRYNLVFP  300
            RTIELR AEW E+DF+++LW +P  RMKMRR H+VPLS QV D LQQL++ +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFIDGLEH  391
            +IRGTYNHA Y++ RR M+QWY+D+ID+L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

59) EcSMS35_0299 in NC_010498


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  437 bits (1647),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 238/394 (61%), Positives = 319/394 (81%), Gaps = 0/394 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L ARQV++A+P+EK YKL+D  GLYL V  +G+RYWR+KYR+ GKEK++A+GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQAVALEWHGTKVSRWSEGYA  120
            LA+AR  RD+A+K ++EG DP+  K+ EKL + +   NTF+A+A EWH  K   WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIIEAFNKDIFPYIGQLPVNDIKPLVLLNVLRRMESRGATEKAKKVRQRCSEVFRYAIV  180
              ++EA++KDIFPY+G+ +V DI PL +L++LRR+E RG+ EK +KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEELPDFFKALAGYTGSPLVVLAARLLILTGV  240
            TGRA  NPA++LTS++++  + H+P L  +ELP F++ LA Y GSP+  +A+ LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVISGQYPLVFP  300
            RT ELR+A WSE+D+++A+W IP  RMKM+R H+VPLS Q  +I+QQLK +SGQY LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASMNQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D  K MSEAS+N V+KRIGY G+ TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHALYLEGRREMMQWYADCIGRIGNDVN  394
            +IRGTYNHALY++GRREMMQWYAD I+ ++++V+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

60) ETAF_0751 in NC_017309


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  436 bits (1641),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 234/390 (60%), Positives = 314/390 (81%), Gaps = 0/390 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L ARQV++A+P+EK YKL+D  GLYL V  +G+RYWR+KYR+ GKEK++A+GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWHGTKVSRWSEGYT  120
            LA+AR  RD+A+K ++EG DP+  K+ EKL + +   NTF+++A EWH  K   WSE+Y+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDIFPYIGQQPVNEIKPLVLLHVLRRMESRGATEKAKKVRQRCSEVFRYAIV  180
              +LEA++KDIFPY+G+++V +I PL +L++LRR+E RG+ EK +KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEKLPDFFKALSSYTGSPLVVLAARLLILTGV  240
            TGRA  NPA++LTS++++  + H+P L  + LP F++ L+ Y GSP+  +A+ LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVMSGQYPQVFP  300
            RT ELR+A WSE+D+++A+W IP  RMKM+R H+VPLS Q  +I+QQLK  SGQY  VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY G+ TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYADYIDNIG  390
            +IRGTYNHA Y++GRREMMQWYADYID+++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

61) Pecwa_1403 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  436 bits (1643),  Expect = 7e-124, Method: Compositional matrix adjust.
 Identities = 240/391 (62%), Positives = 324/391 (83%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEIT  60
            M+LT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+ GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYS  120
            L+EAR +RD+A++ I+ G DP+E+K+ +K  ++    NTF A+A EWH+ K  +WS +Y+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLMEAFENDIFPDIGKRPVAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR+V++I PLEML  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPDFLRALSTYSGSKITQLATRILMLTGV  240
            TGRA  NPASEL+S+L++PKA+H+PHL +DELP FLR L+ Y GS +T++AT +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RTIELR AEW E+DF+++LW +P  RMKMRR H+VPLS QV D LQQL++ +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFTDGLEH  391
            +IRGTYNHA Y++ RR M+QWY+D+ D+L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

62) ECSE_0264 in NC_011415


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  435 bits (1640),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 239/389 (62%), Positives = 310/389 (80%), Gaps = 0/389 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L ARQV++A+P+EK YKL+D  GLYL V  +G+RYWR+KYR+ GKEK++A+GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWHGTKVSRWSEGYA  120
            LA+AR  RD+A+K ++EG DP+  K+ EKL + +   NTF+++A EWH  K   WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIIEAFNKDIFPYIGQLPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVFRYAIV  180
              ++EA++KDIFPY+G+ +V +I PL +L++LRRIE RG+ EK +KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVVELPDFFKALSGYTGSPLVVLAARLLILTGV  240
            TGRA  NPA++LTS++++  + H+P L   ELP F++ L+ Y GSP+  +A+ LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGACWSEFDFEKAVWEIPAERMKMKRPHLVPLSTQALEIAQQLKVMSGQYPLVFP  300
            RT ELR+A WSE+DF++A+W IP  RMKM+R H+VPLS Q  +I QQLK  SGQY LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY G+ TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRLEMMQWYADYIDKL  389
            +IRGTYNHA Y+DGR EMMQWYADYID L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

63) Pat9b_1012 in NC_014837


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  434 bits (1636),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 236/391 (61%), Positives = 315/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNVRQIETAKPKDKAWKLADGGGLYLEIFPTGGKSWRLKYRFAGKEKRVVFGLYPAVT  60
            M L  RQ+ETA+PK+K  KL+D  GLYL +  TG++ WRLKYR+AGKEK++ +G+YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARGKREDAKRILAAGGDPGAAKQEAKQAKILAVNNNFEAMAREWHGTKRANWSQGYA  120
            LA+AR KR+DA++I++ GGDPG  K+  K ++ ++  N F+A+A EWH  K  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDILEYLRKDIFPHIGKMPVTEITPMLMLAVLRKMEQRGVLDKLKKTRQACSQIYVYAIV  180
              +LE L KDIFP +GK +VT+I P+ ML +LR++E+RG L+KL+K RQ C+QI+ YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPVSELAGALKSPKQKHFPHLLNNEIGAFLRALCGYSGSKMTQYATRLLMLTGT  240
            TGRA  NP SEL+++L +PK  HFPHL  +E+  FLR L  Y GS +T+ AT LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWREFDLSKGLWEIPEGRMKMRRKHSVPLSRQAVELLEEIQQLTGRGKYVFP  300
            RTIELR+AEW E+D+ ++LW IPE+RMKMRRKH VPLSRQ  ++L++++ ++G+ + VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRSNAGKPMSEATINQVIKRVGYDGRATGHGFRHTMSTVLHEQGYNSAWIEVQLAHVDKN  360
            GR +  KPMSEA+IN V+KR+GYDGRATGHGFRHTMST+LHEQG+NSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYLDGLRD  391
            SIRGTYNHA Y+DGRREM+QWYADY+D+L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

64) EC55989_0268 in NC_011748


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  433 bits (1630),  Expect = 8e-123, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPSGGKYWRFKYRVAGKEKLLALGVYPEVT  60
            M L ARQ++TA+PKEK YKL+D  GLYLLVK +G++YWR+KYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LA+AR KR++A++ I+ G DP E KR EK+++     NTF  +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FPY+GK+++++I PLE+L++LRRIE RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA  NPA++LTS++ +  + H+P L A ELP F++ L+ Y GS++  MA+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWDEIDLNKAIWEIPASRMKMRRPHVVPLSKQALSLIGQIKELTGNYPLMFP  300
            RT ELR+A W EID+++A+W IP SRMKMRR HVVPLS+Q   ++ Q+K ++G+Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY+G+ TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

65) O3K_20180 in NC_018658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  433 bits (1630),  Expect = 8e-123, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPSGGKYWRFKYRVAGKEKLLALGVYPEVT  60
            M L ARQ++TA+PKEK YKL+D  GLYLLVK +G++YWR+KYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LA+AR KR++A++ I+ G DP E KR EK+++     NTF  +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FPY+GK+++++I PLE+L++LRRIE RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA  NPA++LTS++ +  + H+P L A ELP F++ L+ Y GS++  MA+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWDEIDLNKAIWEIPASRMKMRRPHVVPLSKQALSLIGQIKELTGNYPLMFP  300
            RT ELR+A W EID+++A+W IP SRMKMRR HVVPLS+Q   ++ Q+K ++G+Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY+G+ TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

66) ETEC_0316 in NC_017633


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  432 bits (1627),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 243/391 (63%), Positives = 314/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L ARQ++TA+PKEK YKL+D  GLYLLVK  G++YWRLKYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarakredakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LA+AR KR+DA++ I+ G DP E KR EK+++     NTF  +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FPY+GK+++++I PLE+L++LRRIE RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA  NPA++LTS++ +  + H+P L A ELP F++ L+ Y GS++  MA+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWDEIDFNKALWEIPASRMKMRRPHIVPLSEQALSLIGKIREITGNYPLMFP  300
            RT ELR+A W EIDF++ALW IP SRMKMRR H+VPLS Q   ++ +++ ++G+Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

67) Pecwa_1377 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  432 bits (1625),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 240/391 (62%), Positives = 324/391 (83%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFAGKQKTLALGVYPEIT  60
            M+LT  +V +A+P +K YKL+D  G+ L+V   G++YWRL+YR+AGK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWREYKRPNWSKGYA  120
            L+EAR +RD+A++ I+ G DP+E+K+ +K  ++    NTF A+A EW++ K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
              ++EA+++DIFP +GKR++++I PLEML  LR++EKRG L+KLRK+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAENNpaselasalpppkaTHYPYLLPDELPDFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA  NPASEL+S+L++PKA+H+P L +DELP FLR L+ Y GS VT++AT +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRQAEWKEFDFEKRLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RTIELR AEW E+DF++ LW +P  RMKMRR H+VPLS QV D LQQL++ +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GR DI KPMSEASIN VLKRIGY+G+ATGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRSMLQWYGDFVDGLEH  391
            +IRGTYNHA Y++ RR M+QWY+D++D+L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

68) Dda3937_00938 in NC_014500


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  431 bits (1624),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 237/391 (61%), Positives = 312/391 (80%), Gaps = 0/391 (0%)

Query  1    MKLNARQVDTAKPKDKPYKLSDGGGLYLLVNPNGSRYWRLKYRVDGKEKLLALGVYPAIS  60
            M L ARQV+TA+PK+K YKLSD  GLYLLV+  G+RYWRLKYR+ GKEK LALGVYP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARGKRDEAKRGIAGGIDPNVARREEKIAREAQIKNTFQDIALEWHASKIKKWSAGYA  120
            LA+AR KRD+A++ I+ G DP   +R EK+++     NTF+ +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFNKDVFPYIGNKPIAQIKPLELLNVLRRMESRGATEKAKKVRQRCGEVFRYAIV  180
              ++EA++KD+FPY+G++++++I PLE+L++LRR+E RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESSHYPFLNAQELPEFFHALSEYTGSKlvllaarllilTGV  240
            TGRA  NPA++LTS++ +  ++H+P L A+ELP F++ L+EY GS +  +A+ LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRAANWQEIDTENARWEIPAERMKMRRPHCVPLSRQAIAILDEIREMTGRYPLVFP  300
            RT ELR+A+W EID +NA W IP  RMKMRR H VPLSRQ   IL++++  +G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRNTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  + MSEASIN V+KRIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMESLEN  391
            +IRGTYNHA Y+DGRREM+QWYADY++SL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

69) ECABU_c03450 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  431 bits (1623),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 314/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L ARQ++TA+PKEK YKL+D  GLYLLVK  G++YWRLKYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarakredakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LA+AR KR+DA++ I+ G DP E KR EK+++     NTF  +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FPY+GK+++++I PLE+L++LRRIE RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTTKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA  NPA++LTS++ +  + H+P L + ELP F++ L+ Y GS++  MA+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWDEIDFNKAIWEIPASRMKMRRPHIVPLSEQALSLIGKIREITGNYPLMFP  300
            RT ELR+A W EIDF++A+W IP SRMKMRR H+VPLS Q   ++ +++ ++G+Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

70) A3UG_04555 in NC_018079


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  431 bits (1621),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 237/391 (61%), Positives = 313/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNARQVDAAKPKDNPYKLADGGGLYLLIKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L ARQV++A+PK++ YKL+D  GLYLL+K  G++YWRLKYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIAREIQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LA+AR KR++A++ I+ G DP E KR EK+++ I   NTF  +A EWH  K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKARKVRQRCGEVFRYAIV  180
              +LEA++KD+FPY+GK+++++I PLE+L++LRRIE RG+ EK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHFPFLTPKELPDFFNALSGYSGSELVVLAARLLIITGL  240
            TGRA  NPA++LTS++ +  + HFP L + ELP F+  L+ Y GS +  +A+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRGAFWDEINISKAVWEIPASRMKMRRPHVVPLSRQALTLIGQIQELTGNYPLVFP  300
            R  ELR+A W EI++ +A+W IP SRMKMRR HVVPLSRQ   ++ Q++ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY+G+ TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMEALEN  391
            SIRGTYNHA Y+DGRREM+QWYADY+++L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

71) ECO55CA74_01660 in NC_017656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  429 bits (1617),  Expect = 9e-122, Method: Compositional matrix adjust.
 Identities = 226/386 (59%), Positives = 310/386 (81%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D  GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LA+AR +RD+ARK+++EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  300
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  360
            GR D N+PMSEASIN  +KRIGY+G+ TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYFSGRKSMMDWYSNLI  386
            SIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

72) W5S_3565 in NC_017845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  428 bits (1612),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 241/389 (62%), Positives = 309/389 (80%), Gaps = 0/389 (0%)

Query  1    MKLNARQVDTAKPKDKPYKLADGGGLYLLVKPNGARYWRLKYRVAGKEKLLALGVYPDVT  60
            M L ARQV+TA+PK+K YKL+D  GLYLLVK  GARYWRLKYR+AGKEK LALGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarakrdeakrGIAGGIDPSEAKRKEKAILEAQVNNTFQDIATEWHSSKLKKWSEGYA  120
            LA+AR KRD+A++ I+ G DP+E KRKEK        NTF+ +ATEWH  K   WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFNKDVFPYIGKKPIAEIKPLELLNVLRRMEGRGATEKAKKVRQRCGEVFRYAIV  180
              ++EA++KD+FPY+GK+++++I PLE+L++LRR+E RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESSHYPFLAAPDLPAFFEALSSYSGSMLVVLAARLLIITGL  240
            TGRA  NPA++LTS++ +  ++H+P L A +LP F+  L+ Y GS +  +A+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGATWKEIDSDTAVWEIPAERMKMRRPHIVPLSSQAQAIIARIREMTGRYPHIFP  300
            RT ELR+A W EID D A+W IP  RMKMRR H+VPLS Q   I+ +++  +G+Y  +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKTMSEASINQVFKRIGYSGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR D  K MSEASIN V+KRIGY G+ TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDAL  389
            SIRGTYNHA Y+DGRREM+QWYADY+D+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

73) YE4117 in NC_008800


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  428 bits (1611),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 233/390 (60%), Positives = 314/390 (81%), Gaps = 0/390 (0%)

Query  1    MKLNARQVETAKQKEKSYKLTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVS  60
            M L ARQVETA+ KEK YKL+D  GLYL V ++GA+YWR+KYR +GKEK++A+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKRETAKKLLASGTDPGETKKAEKLAQKIAMENSFELMAREWHKNKADRWSLRYR  120
            LA+AR KR+ A+K+++ G DPGE K+ EKL+QKI+  N+F+ +A EWH++K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIDTFEKDIFPFIGRRPIADIKPMELLETLKRMEKRGALEKMRKVRQRCGEVFRYAII  180
              ++++++KDIFP++G+R+++DI P+E+LE L+R+EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAGALQTHKKQHLPFLTAQELPYFLRDLAGYTGSIITKTATRIIMLTGV  240
            TGRA  NPA++L+++L + K  H+P L A+ELP FLR LA Y GS +T+ AT +++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDLDLDKGLWHIPPEHMKMKRPHVVPLSIQVITAFKQLHPLTHHYPLVFI  300
            RT ELR A W ++D+D++LW IP  +MKM+R HVVPLS QV   ++QL  ++ +Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDHRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGYNSAWIETQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQG+NSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRQEMLQWYSDYMDSLE  390
            SIRGTYNHA Y+DGR+EM+QWY+DY+DSL 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

74) ECs0289 in NC_002695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  428 bits (1612),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 225/386 (59%), Positives = 310/386 (81%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y ++D  GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LA+AR +RD+ARK+++EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  300
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  360
            GR D N+PMSEASIN  +KRIGY+G+ TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYFSGRKSMMDWYSNLI  386
            SIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

75) SMWW4_v1c08950 in NC_020211


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  428 bits (1611),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 226/386 (59%), Positives = 309/386 (81%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSRRDEARKLVVEGKNPSEVRKEQKLALQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LA+AR +RD+ARK++ EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFKNDIFPYVGARPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKANEIPDFLRALESYTGSRVVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+A+E+P FLR L  Y GS V ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAASWSEFDLDNAIWEIPAERMKMRRPHLVPLSTQALHLLNELVVMTGNYRYVFP  300
            RTIELR+A WSE+D+DNA+W IP  RMKMRR H+VPLS Q  ++L++L   +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRVTGHGFRHSLSTILHEQGYESAWIETQLAHVDKN  360
            GR D NKPMSEASIN V+KRIGY+GR TGHGFRH++STILHEQG++SAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGAYNHAQYISQRGLMLQWYSDFI  386
            SIRG+YNHA YI  R  M+QWY+D+I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

76) PC1_3281 in NC_012917


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  427 bits (1608),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 227/386 (59%), Positives = 317/386 (83%), Gaps = 0/386 (0%)

Query  1    MALNDMQVRSAKPEEKPYTLGDGLGLSLLIEPTGSKSWRFRYRFGGKPKMISFGAYPLVS  60
            MAL   QV +A+P EK Y L+D  GL LL+  TG++ WR++YR++GK K +++G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARKKRDEARKQVLDGINPSEQRKAQKLNLMSESENTFEIIACEWHAMKSARWSAGYA  120
            LAEAR KRD+ARK + +G +P+E+++ +KL     + NTF+ +A EWH  KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFRNDIFPYVGKRSIAEIKPLELLNVLRKMEKRGALEKMKKVRQRCSEVFRYAIA  180
              ++EA+ +DIFPY+GKRS+++I PLE+L++LR++EKRG+LEK++KVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEINPAADLTSVLTTHKAQHYPFLKADEIPTFIQAVESYTGSVLVQIAAKLLMLTGV  240
            TGRA +NPA++LTS L++ KA H+P L+ADE+P F++ +  Y GS + ++A++LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWSEFDLEHAIWEIPAERMKKRRSHLVPLSTQALSLLSKLQTISGNYKYVFP  300
            RTIELR+AEWSE+D+++A+W IP  RMK RR H+VPLS Q   +L +L+T+SG+Y+ VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEGSINRMIKHIGYEGRLTGHGFRHTMSTILHEKGYDSAWIEMQLAHVDKN  360
            GR D NKPMSE+SIN ++K+IGY+GR TGHGFRHTMSTILHE+G++SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLEQRRDMMQWYSNCF  386
            SIRGTYNHALY++ RR+MMQWY++ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

77) G2583_0351 in NC_013941


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  427 bits (1608),  Expect = 5e-121, Method: Compositional matrix adjust.
 Identities = 226/386 (59%), Positives = 310/386 (81%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L   Q+  A+P  K Y L+D  GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LA+AR +RD+ARK+++EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GR D N+PMSEASIN  +KRIGY+G+ TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

78) Z0324 in NC_002655


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  426 bits (1602),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 225/386 (59%), Positives = 310/386 (81%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L   Q+  A+P  K Y ++D  GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LA+AR +RD+ARK+++EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GR D N+PMSEASIN  +KRIGY+G+ TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

79) intS in NC_016514


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  426 bits (1605),  Expect = 8e-121, Method: Compositional matrix adjust.
 Identities = 238/391 (61%), Positives = 312/391 (80%), Gaps = 2/391 (0%)

Query  24   MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPTVT  83
            M L AR+VE+A+ KEK YKLSD  GLYL V   G+RYWR+KYR+AGKEK+L++GVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  84   LADARQKREDAKKLLAAGEDPGEVKKAKKQALNAAIETLNPFRDVALEWHKMKSPKWSEG  143
            LA+AR KR+DA+K+++ G DPGE  K +K+ L   I + N F+ +A EWH+ KS  WSE+
Sbjct  61   LAEARIKRDDARKIISEGGDPGE--KKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  144  YASDIIEAFEKDIFPHIGHRPIADIQPLELLGVLRLIEARGAMEKAKKVRQRCGEVFRYA  203
            YA  ++EA++KDIFP +G R+++DI PLE+L +LR IE RG++EK +KVRQ C ++FRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  204  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKAKELPEFFTALNAYSGSPIVllgaqllilt  263
            I TGRA  NPA++L+S++ +  A H+P L+A ELP F+  L  Y GSP+  ++++LL+LT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  264  glRTGELRAGEWSEVDFNNAVWEIPKERMKMRRSHIVPLPKQALSHLKSLKDLTGNYPLM  323
            GLRT ELR++EWSE+DF+NA+W IP  RMKMRR H+VPL++Q    L+ LK ++G+Y L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  324  FPGRNDPSKPMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  383
            FPGR D +KPMSEASIN V+KRIGY GR TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  384  KNSIRGIYNHAQYLEGRREMMQWYANYLSEL  414
            KNSIRG YNHA Y++GRREMMQWYA+Y+  L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

80) PAGR_g2495 in NC_017554


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  423 bits (1593),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 227/389 (59%), Positives = 309/389 (80%), Gaps = 0/389 (0%)

Query  1    MQLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKCVVFGVYPTIT  60
            M L ARQVETA+PK+K YKL+D  G+YL V   G++ WR+KYRIAGKEK + +GVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSKRDDAKKLLVNGVDPSAFKQESKQAHIEEVKNTFQQIALEWHNMKVKKWSAGYA  120
            LA+AR KRDDA+K++ +G DP+  K+  K ++     NTF+ +A EWH+ K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEDRGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FP++G+R+V+DI PLE+L++L+++E RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESTHYPFLTTEELPAFFKALAGYSGSELMVLAARLLIITGL  240
            TGRA  NPA++LTS++ +  ++H+P L ++ELP F++ LA Y GS +  +A+ LL++TGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWSEIDTKKALWEISAERMKMRRPHIIPLSTQALAIIEQIRAMTGQFPLLFP  300
            RT ELR+A WSEID  +ALW I+  RMKMRR H++PLS Q   I++Q+++ +GQ+ L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPSKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHVDKN  360
            GR D +K MSEASIN V+KRIGY GR TGHGFRHTMST+LHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMASL  389
            +IRGTYNHA Y+DGRREM+QWYADY+ SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

81) KPK_4426 in NC_011283


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  423 bits (1594),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 225/391 (58%), Positives = 313/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKRVVFGVYPTIT  60
            M L ARQVETA+PK+K YKL+D  G+YL V   G++ WR+KYRIAGKEK++ +GVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSKRDDAKKLLVNGVDPSAFKKESKLAQIEEVKNTFQQIALEWHNMKVKKWSAGYA  120
            LA+AR KRDDA+K++ +G DP+  K+  KL+Q     NTF+ +A EWH+ K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEERGATEKAKKVRQRCGEVFRYAIV  180
              +LEA++KD+FP++G+R+V+DI PLE+L++L+++E RG+ EK +KVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLTSAMQGHESKHYPFLTIEELPAFFKALAGYSGSELVVLAARLMIITGV  240
            TGRA  NPA++LTS++ +  + H+P L  +ELP F++ LA Y GS +  +A+ L+++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRGALWSEIYTDKGLWEISAERMKMRRPHIVPLSVQALEIIEKIRAMTGNFHLMFP  300
            RT ELR+A WSEI  D++LW I+  RMKMRR H+VPLS Q  +I++++++ +G+++L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPSKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHLDKN  360
            GR D +K MSEASIN V+KRIGY GR TGHGFRHTMST+LHEQG+N+AWIE QLAH+DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            +IRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

82) SeSA_A0374 in NC_011094


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  422 bits (1590),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 242/394 (62%), Positives = 310/394 (79%), Gaps = 2/394 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLADGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPAVS  60
            M L AR+VE+A+ KEK YKL+D  GLYL V   G+RYWR+KYR+AGKEK+L++GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREDAKKLLAAGNDPGEVkkakklalTSATEIVNPFKEVALEWHKMKSPKWSKG  120
            LA+AR KR+DA+K+++ G DPGE  K +K  LT      N F  +A EWH+ KS  WS +
Sbjct  61   LAEARIKRDDARKIISEGGDPGE--KKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  121  YASDILEAFEKDIFPHIGQRPIADIKPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            YA  +LEA++KDIFP +G+R+++DI PLE+LE+LR IE RG++EK +KVRQ C ++FRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  181  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKATELPEFFTALNAYTGSPIVVLGAHLLILT  240
            I TGRA  NPA++L+S++ +  A H+P L+A ELP F+  L  Y GSP+  ++++LL+LT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  GLRTGELRAAEWCEIDFDNALWEIPKERMKMRRAHLVPLSNQalalletlkeltGNYPLM  300
            GLRT ELR+AEW EIDFDNALW IP  RMKMRR H+VPLS Q   +L+ LK ++G+Y L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGRNDPSKSMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            FPGR D +K+MSEASIN V+KRIGY GR TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYLEGRREMMQWYANYLSELVGN  394
            KNSIRG YNHA Y++GRREMMQWYA+Y+  L  +
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

83) SEEB0189_04710 in NC_021844


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  421 bits (1586),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 224/390 (58%), Positives = 305/390 (79%), Gaps = 0/390 (0%)

Query  1    MKLTARQVETAKPKDKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LTARQVETA+PK+K YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARNKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS SY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE RG+ EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++++    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHMVPLSSQAIDLLNQLKPMTGAGTLLFP  300
            R  ELR AEW E+DF+  +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GR + +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRKEMMQWYGDFTSNLG  390
            SIRGTYNHA Y++GR+EMMQWY+D+  +L+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

84) ECENHK_04640 in NC_018405


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  421 bits (1585),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 225/386 (59%), Positives = 310/386 (81%), Gaps = 0/386 (0%)

Query  1    MPLNDMLIRRAKPEDKPYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L    +  A+P +K Y L+D +GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSRRDEARKLVAEGKNPSEVRKEQKRALQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LAEAR +RD+ARK+++EG +P+E ++ +K + +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAADLSSALEVHQSNHFPFLKADEIPEFLRALEGYTGSKLVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRSHLVPLSTQALDLLNELKTMTGNYRYVFP  300
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LKT +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGKVTGHGFRHTLSTVLHEKGYDSVWIETQLAHVDKN  360
            GR D NKPMSEASIN V+KRIGY+G+ TGHGFRHT+ST+LHE+G++S WIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYIDNRKCMLQSYADFI  386
            +IRGTYNHA YID R+ M+Q YAD+I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

85) A225_1133 in NC_018106


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  420 bits (1582),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 230/388 (60%), Positives = 316/388 (82%), Gaps = 0/388 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR+AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LA+AR +RDDARK+++EG +P+E ++ +K++ +  + ++F+ +ATEWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFQNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+++DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPAAELSSALDVHQSNHFPFLKADEIPDFLRALNGYTGSRLVLIATKLLMITGV  240
            TGRA  NPA+EL+S+L   ++ HFP L+ADE+P FLR L  Y GS +  +AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWSEFDLDNAIWEIPAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RTIELR+A WSE+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEASVNQVIKRIGYGGKVTGHGFRHSMSTILHEHGFESSWIEMQLAHVDKN  360
            GR D NKPMSEAS+N V+KRIGY+G+ TGHGFRH+MSTILHE+GF+S+WIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDKRKVMMQWYADNVQE  388
            SIRGTYNHA Y+D R+ MMQWYAD ++ 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

86) A225_4904 in NC_018106


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  420 bits (1582),  Expect = 5e-119, Method: Compositional matrix adjust.
 Identities = 226/389 (59%), Positives = 305/389 (79%), Gaps = 0/389 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEALTREWYQRRYDRWSVSYR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+AL+ EW Q++   WS SY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
              ++ +++KD+FPY+G R++ DI P+E+L +L +IE RG+ EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLQTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++++    H++ L  DELP FL+ L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFDSAWIELQLAHVDKN  360
            GR D +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYSDYLKLL  389
            SIRGTYNHA Y++GRREMMQWY+DY+  L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

87) KPHS_10130 in NC_016845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  419 bits (1579),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 231/391 (60%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LA+AR +RDDARK+++EG +P+E ++ +K++ +  + ++F+ +ATEWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+++DIFPY+G R++ +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKADELPDFLRALDSYTGSRLVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADELP FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWSEFDLDNAIWEISAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RTIELR+A WSE+D+DNA+W I+  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRLTGHGFRHTMSTILHEKGFDSAWIEIQLAHVDKN  360
            GR D NKPMSEASIN V+KRIGY+GR TGHGFRHTMSTILHE+GF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRSSMIQWYNDYIYSIKD  391
            SIRGTYNHA Y++ R  M+QWY DYI S+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

88) N559_4136 in NC_022082


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  419 bits (1579),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 231/391 (60%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LA+AR +RDDARK+++EG +P+E ++ +K++ +  + ++F+ +ATEWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+++DIFPY+G R++ +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKADELPDFLRALDSYTGSRLVQIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADELP FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWSEFDLDNAIWEISAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RTIELR+A WSE+D+DNA+W I+  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRLTGHGFRHTMSTILHEKGFDSAWIEIQLAHVDKN  360
            GR D NKPMSEASIN V+KRIGY+GR TGHGFRHTMSTILHE+GF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRSSMIQWYNDYIYSIKD  391
            SIRGTYNHA Y++ R  M+QWY DYI S+ +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

89) EAE_02780 in NC_015663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  418 bits (1574),  Expect = 2e-118, Method: Compositional matrix adjust.
 Identities = 225/387 (59%), Positives = 302/387 (79%), Gaps = 0/387 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARGKREDAKRTLAAGNDPSLERKIEKLSRQQNAENSFEAITREWYQRRYDRWSVSYR  120
            L+EAR KR+DA++ ++ G DP+  ++ EKL+++ +A N+F+A++ EW Q++   WS SY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE RG+ EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPALASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVIVKIAMQLLILTGV  240
            TGRA  NPA+ L+S++++    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWREFDFERKVWNVPAERMKMRRPHLVPLSGQAIDLLNQLKPMTEAGTLLFP  300
            R  ELR AEW E+DF+  +W +P  RMKMRR H+VPLS Q  D+L+QLK  +    L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSEMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GR + +KPMSE ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYSNYIS  387
            SIRGTYNHA Y++GRREMMQWY++YI 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYID  387

90) ETAE_0799 in NC_013508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  418 bits (1572),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 229/389 (59%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  77
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR+AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  78   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSTKWSEGYA  137
            LA+AR +RDDARK+++EG +P+E ++ +K++ +  + ++F+ +ATEWHQ KS  WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  138  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
              ++EA+++DIFPY+G R++ +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  198  TGRAEFNPAADLSSALDVHQSNHFPFLKADEIPDFLRALDGYTGSKLVQIATKLLMITGV  257
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  258  RTIELRAALWSEFDLDNAIWEIPAERMKMRRAHLVPLSTQALDLLNELKIMSGNYRYVFP  317
            RTIELR+A WSE+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  SG+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  318  GRNDPNKPMSEASINQVIKRIGYSGRVTGHGFRHTLSTILHEKGFSTAWVEMQLAHTDKN  377
            GR D NKPMSEASIN V+KRIGY GR TGHGFRHT+STILHE+GF++AW+EMQLAH DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  KIRGTYNHAQYLEDRRNMMQFYANYFIPL  406
             IRGTYNHA Y+++RR+MMQ YA+Y+ +L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

91) KOX_02335 in NC_016612


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  418 bits (1572),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 226/391 (58%), Positives = 305/391 (79%), Gaps = 0/391 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLSAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LAEAR KR+DA++ +S G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS SY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
              ++ +++KD+FPY+G R++ DI P+E+L +L +IE RG+ EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++++    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GR D +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYGELLSFMCD  391
            SIRGTYNHA Y+DGRREMMQWY++ +  + +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

92) int in NC_011745


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  418 bits (1572),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 221/391 (57%), Positives = 301/391 (77%), Gaps = 0/391 (0%)

Query  14   MLLSDLAIRRAKPKEKAYTLNDGNGLSLLIEPNGSKGWRLRYRFAGKPKMLSLGVYPEVS  73
            M L+   +  A+PKEK Y L+D  GL LL+   G++ WRL+YR+AGK K L+LGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  74   LSDARTARDEAKRLIAGGVNPSEVRKAQKREQANKCGNTFEVIAREWYEKRLDRWSPSYA  133
            L++AR  RD+A+++I+ G +P+E ++ +K  Q     NTF+ +A EW + +   WS SYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  134  EEMIETFEKDVFPYIGGRPIAEIKPMELLAVLSRLNDRGATEKLRKVRQRCGEVFRYAII  193
              ++E+++KD+FPY+G R++++I P+E+L +L R++ RG+ EKLRKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  194  TGRAEYNPAPDLASAFAPHKKEHYAYLKVDELPEFFRVFNTYTGSQIVKLGMRLLILTGL  253
            TGRA  NPA++L+S++A+ K  H++ L+ DELP F+R +  Y GS + +++  LL+LTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  254  RPGELRQAEWQEIDFDNRLWEVPKERMKMRRPHCVPLSEQAIAILEQLKHMTGQYPFIFP  313
            R  ELR AEW EIDFDN LW +P  RMKMRR H VPLS Q   IL+QLK  +GQY ++FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  314  GRIQHSKPMSEMAMNVLIRRIGYAGRVTGHGFRHTMSTILHEQGYNSAWIETQLAHVDKN  373
            GR + +KPMSE ++N++++RIGY GR TGHGFRHTMSTILHEQG+NSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  374  SIRGTYNHAQYLDGRREMLQWYADYMDSLEQ  404
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

93) A225_1439 in NC_018106


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  417 bits (1570),  Expect = 4e-118, Method: Compositional matrix adjust.
 Identities = 228/362 (63%), Positives = 298/362 (83%), Gaps = 0/362 (0%)

Query  1    MNPNGSRYWRLKYRIAGKEKLLALGVYPDITLAVARQKRADAKKVLAAGGDPGqekqeek  60
            ++  G+RYWRLKYRIAGKEK LALGVYPD++LA AR KR DA+K+++ GGDPG+ K+ EK
Sbjct  30   VKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEK  89

Query  61   qakeqaVANSFERLAMEWHSHKSTSWSEGYAEHLLMYLKKDIFPFIGQKAITDISQVEML  120
             ++  + +N+F+ LA EWH HKS SWSE+YA  +L  L KDIFP++G++++TDI  +EML
Sbjct  90   LTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEML  149

Query  121  NVLRKMEQRGVLDKLKKTRQACRQIFTYAIITGRAEHNPVSDLAGALKPPKQQHYPHLLV  180
            ++LR++E+RG L+KL+K RQ C QIF YAI TGRA  NP S+L+++L +PK  H+PHL  
Sbjct  150  EILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLRA  209

Query  181  DQIPDFLRALNEYSGSTITRNATRLLMLTGLRTIELRASEWVDIDFDKGIWNIPAERMKM  240
            D++P FLR L EY GS +TR AT LL+LTGLRTIELR++EW +IDFD+++W IP  RMKM
Sbjct  210  DELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKM  269

Query  241  RRPHLVPLSTQVRELLEEIHQLTGRGKYVFPGRNDAGKPMSEASINQVIKRIGYDGKATG  300
            RR H+VPLS QV ++L+++  ++G+ + VFPGR D  KPMSEASIN V+KRIGYDG+ATG
Sbjct  270  RRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATG  329

Query  301  HGFRHTMSTILHERGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRRDMLQWYADYMAAL  360
            HGFRHTMSTILHE+G+N+AWIE QLAHVDKNSIRGTYNHA Y+DGRR+M+QWYADY+ +L
Sbjct  330  HGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

Query  361  EN  362
             +
Sbjct  390  SE  391

94) ECH74115_0306 in NC_011353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  417 bits (1569),  Expect = 6e-118, Method: Compositional matrix adjust.
 Identities = 223/386 (58%), Positives = 308/386 (80%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L   Q+  A+P  K Y ++D  GL LL+   G++ WR++YR AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LA+AR +RD+ARK+++EG +P+E ++ +KL+ +  + N+F+ +A EWHQ KS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVNRPAIA  197
              ++EA+ +DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++ R AIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS + ++AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RTIELR+A W E+D+DNA+W IP  RMKMRR H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GR D N+PMSEASIN  +KRIGY+G+ TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

95) ETAF_0741 in NC_017309


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  414 bits (1560),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 227/384 (60%), Positives = 312/384 (82%), Gaps = 0/384 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  60
            M+L   Q+  A+P  K Y L+D +GL LL+   G++ WR++YR+AGK K ++LGVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSEGYA  120
            LA+AR +RDDARK+++EG +P+E ++ +K++ +  + ++F+ +ATEWHQ KS  WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SDIMEAFQNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
              ++EA+++DIFPY+G R+V +I PLE+L++LR+IEKRG+LEK+RKVRQ C+++FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPAADLSSALDVHQSNHFPFLKADEIPDFLRALDGYTGSQLVLIATKLLMITGV  240
            TGRA  NPA++L+S+L   ++ HFP L+ADE+P FLR L  Y GS +  +AT+LL++TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAALWSEFDLDNAIWEIPAERMKMRKAHLVPLSTQALDLLNELKIMTGNYRYVFP  300
            RTIELR+A WSE+D+DNA+W IP  RMKMR+ H+VPLS Q  D+L++LK  +G+YR VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPYKPMSEASINQLIKRIGYGGRLTGHGFRHTFSTILHEAGFNSIWIELQLAHVDKN  360
            GR D  KPMSEASIN ++KRIGY+GR TGHGFRHT STILHE GFNS WIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGIYNHANYIESRKDMMQWYSD  384
            SIRG YNHA YI++R++MMQWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

96) int in NC_011740


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  414 bits (1559),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 224/386 (59%), Positives = 302/386 (79%), Gaps = 0/386 (0%)

Query  1    MKLTARQVETAKPKDKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LTARQVETA+PK+K YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAVGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS SY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE RG+ EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++++    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF+  +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKSMSDMALIVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GR + +K+MS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYGDLI  386
            SIRGTYNHA Y++GRREMMQWY+D I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

97) ECNA114_2439 in NC_017644


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  413 bits (1556),  Expect = 5e-117, Method: Compositional matrix adjust.
 Identities = 219/388 (57%), Positives = 315/388 (82%), Gaps = 0/388 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+  Q+  A+PK+K Y L+D  GL LL+ T+G++ WR++YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARTKRDEARSMLANGINPSEARKADKIALQFAHENSFESVAREWHSSKKATWSEGYA  120
            LA+AR KRD+AR ++++G +P+E ++ +K++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
            + VL+ ++KDIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y+GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAINILKKLQEITGNYSLVFP  300
            RTIELR+AEW+E+D+DNALW IP  RMK RR H+VPLS Q  +IL++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVSKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESAWIEMQLAHVDKN  360
            GR D++KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIKDRQVMMEWYASLLNT  388
            SIRGTYNHA YI +R+ MM+WYA  +++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

98) ECSF_2224 in NC_013654


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  413 bits (1556),  Expect = 5e-117, Method: Compositional matrix adjust.
 Identities = 219/388 (57%), Positives = 315/388 (82%), Gaps = 0/388 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+  Q+  A+PK+K Y L+D  GL LL+ T+G++ WR++YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARTKRDEARSMLANGINPSEARKADKIALQFAHENSFESVAREWHSSKKATWSEGYA  120
            LA+AR KRD+AR ++++G +P+E ++ +K++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
            + VL+ ++KDIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y+GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAINILKKLQEITGNYSLVFP  300
            RTIELR+AEW+E+D+DNALW IP  RMK RR H+VPLS Q  +IL++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVSKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESAWIEMQLAHVDKN  360
            GR D++KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIKDRQVMMEWYASLLNT  388
            SIRGTYNHA YI +R+ MM+WYA  +++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

99) EAE_24695 in NC_015663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  412 bits (1551),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 247/389 (64%), Positives = 321/389 (83%), Gaps = 0/389 (0%)

Query  1    MTLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGIYPDIS  60
            M+L ARQVETA+P++K YKL+D  GLYL+V+T G++YWR+KYR+AGKEKKL++G+YPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARTKRDEARKLLANDKDPGEVKKATLLAKKLSVTNTFEAIALEWYSAKVSGWSKSYA  120
            LAEAR KRD+ARK+++++ DPGE K+   L++K+S TNTF+A+A EW   K  +WS SYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DYVKRAFKNNVFPYLGSQPVNEIKPLALLSVLQKMEKRGATELASKVRQRCNEVFRYAIV  180
              V  A+ +++FPYLG ++V +I PL +L +L+++EKRG+ E   KVRQ CN++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLGSALQGHEKQHYPFLTAAELPDFLQKLSNYSGSlitllatrllmltgl  240
            TGRA  NPA++L S+L +    H+P L A ELP FL+KL++Y GS +T +AT LL+LTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtVELRLAEWREIDFDNRIWEIPKTRMKMKRPHVVPlsaqslsalrqlKVLTGNYKLIFA  300
            RT+ELR AEW EIDFDN +W IP +RMKM+R HVVPLS Q    L+QLK ++G+Y+L+F+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVNIAMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GR D+N +MSEASINMV+KRIGYD RATGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYADFMDAF  389
            SIRGTYNHA Y++GRREMMQWYAD++D++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

100) ETAC_11945 in NC_020796


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  412 bits (1551),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 219/388 (57%), Positives = 310/388 (80%), Gaps = 0/388 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRYRYRFAGKPKMISFGVYGDVS  60
            M L+  Q+  A+PK+K Y L+D  GL LL+ T+G++ WR +YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKAEKIALQFAHENSFESVAREWHGSKKATWSEGYA  120
            LA+AR KRD+AR +++ G +P+E ++ EK++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
            + VL+ ++KDIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPAFISALENYKGSLVTKYATQLLMLTGV  240
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWVEFDLENAIWEIPKERMKKRRPHLVPLSTQALSILRQLQVITGNYSLVFP  300
            RTIELR+AEW E+D++NA+W IP  RMK RR H+VPLS Q   IL+QL+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESTWIEMQLAHVDKN  360
            GR D+ KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE+GF+S+WIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYILSRKKMMQWYSEFISN  388
            SIRGTYNHA YI +R+ MMQWY+++I +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

101) ESA_03025 in NC_009778


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  412 bits (1550),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 240/391 (62%), Positives = 313/391 (81%), Gaps = 2/391 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFGGKEKRLSFGVYPTVS  60
            M L AR+VE+A+ KEK YKLSD  GLYL V   G+RYWR+KYR++GKEK+L++GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREEAKKLLATGDDPSEVkkakklaliaaTEIVNPFRDVALEWHKMKSPKWSEG  120
            LA+AR KR++A+K+++ G+DP+E  K +K  L       N F+ +A EWH+ KS  WSE+
Sbjct  61   LAEARIKRDDARKIISEGGDPGE--KKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  121  YASDILEAFDKDIFPHIGHRPIADIQPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            YA  +LEA+DKDIFP +G R+++DI PLE+LE+LR IE RG++EK +KVRQ C ++FRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  181  IVTGRAVYNPAPDLASAMQGHEAVHYPFLKASELPEFFTVLNAYTGSPIVllgahllilt  240
            I TGRA  NPA++L+S++ +  A H+P L+A ELP F+  L  Y GSP+  ++++LL+LT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  glRTGELRAAEWREVDFDNAIWEIPKERMKMRRAHIVPLSKQALVYLKRLKELTGNYPLM  300
            GLRT ELR+AEW E+DFDNA+W IP  RMKMRR H+VPLS+Q    L++LK ++G+Y L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGRNDPSKFMSEASINQVFKRIGYGGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            FPGR D +K MSEASIN V+KRIGY+GR TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYLDGRREMMQWYGDFINGL  391
            KNSIRG YNHA Y+DGRREMMQWY+D+I++L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

102) CSSP291_04405 in NC_020260


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  411 bits (1547),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 247/389 (64%), Positives = 323/389 (84%), Gaps = 0/389 (0%)

Query  1    MPLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDIS  60
            M+L ARQVETA+P++K YKL+D  GLYL+V+T G++YWR+KYR+AGKEKKL++G YPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARTKRDEARKTLANDKDPGEVKKAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYA  120
            LAEAR KRD+ARK ++++ DPGE K+ E L+QK+S TNTF+A+A EW + K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DYVNRAFKNNVFPFVGSQPVNEIKPLELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIV  180
              V  A+ +++FP++G ++V +I PLE+L +L+R+EKRG+ E   KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLGSALQGYEKQHYPFLTAAELPEFLQKLSQYTGSlvtllatrllmltgl  240
            TGRA  NPA++L S+L +    H+P L A ELP FL+KL++Y GS VT +AT LL+LTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtvELRMAEWSEIDFENHIWEIPKSRMKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFA  300
            RT+ELR AEWSEIDF+N +W IP SRMKMRR H+VPLS Q    L+QLK ++G Y+++F+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVNKPMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D+NKPMSEASINMV+KRIGYD RATGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKEMMQWYGDYLDGL  389
            +IRGTYNHA Y++GR+EMMQWY+DY+D+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

103) ECL_03688 in NC_014121


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  411 bits (1547),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 247/389 (64%), Positives = 323/389 (84%), Gaps = 0/389 (0%)

Query  1    MPLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDIS  60
            M+L ARQVETA+P++K YKL+D  GLYL+V+T G++YWR+KYR+AGKEKKL++G YPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARTKRDEARKTLANDKDPGEVKKAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYA  120
            LAEAR KRD+ARK ++++ DPGE K+ E L+QK+S TNTF+A+A EW + K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DYVNRAFKNNVFPFVGSQPVNEIKPLELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIV  180
              V  A+ +++FP++G ++V +I PLE+L +L+R+EKRG+ E   KVRQ C+++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAADLGSALQGYEKQHYPFLTAAELPEFLQKLSQYTGSlvtllatrllmltgl  240
            TGRA  NPA++L S+L +    H+P L A ELP FL+KL++Y GS VT +AT LL+LTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtvELRMAEWSEIDFENHIWEIPKSRMKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFA  300
            RT+ELR AEWSEIDF+N +W IP SRMKMRR H+VPLS Q    L+QLK ++G Y+++F+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVNKPMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GR D+NKPMSEASINMV+KRIGYD RATGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKEMMQWYGDYLDGL  389
            +IRGTYNHA Y++GR+EMMQWY+DY+D+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

104) ECL_01076 in NC_014121


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  411 bits (1547),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 241/391 (62%), Positives = 312/391 (80%), Gaps = 2/391 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPTVS  60
            M L AR+VE+A+ KEK YKLSD  GLYL V   G+RYWR+KYR+AGKEK+L++GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREDAKKLLAAGEDPGEVkkakkhaltaatEILNPFREVALEWHKMKSPKWSEG  120
            LA+AR KR+DA+K+++ G DPGE  K +K+ LT      N F+ +A EWH+ KS  WSE+
Sbjct  61   LAEARIKRDDARKIISEGGDPGE--KKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  121  YASDIIEAFEKDIFPHIGHRPIADIKPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            YA  ++EA++KDIFP +G R+++DI PLE+LE+LR IE RG++EK +KVRQ C ++FRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  181  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKVNELPEFFTALNAYSGSPIVllgahllilt  240
            I TGRA  NPA++L+S++ +  A H+P L+ +ELP F+  L  Y GSP+  ++++LL+LT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  glRTGELRAAEWREVDFDNAVWEIPKERMKMRRTHIVPLSKQALVHLGRLKELTGNYPLM  300
            GLRT ELR+AEW E+DFDNA+W IP  RMKMRR H+VPLS+Q    L +LK ++G+Y L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGRNDPSKFMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            FPGR D +K MSEASIN V+KRIGY GR TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYIEGRREMMQWYADFLEGL  391
            KNSIRG YNHA YI+GRREMMQWYAD++++L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

105) EAE_06555 in NC_015663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  410 bits (1542),  Expect = 7e-116, Method: Compositional matrix adjust.
 Identities = 239/389 (62%), Positives = 316/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLSDGGGLYLEVATSGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LTARQV+TA+PKEK YKLSD  GLYL V T+G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaeardkreaakkVLAAGNDPGEVKKAEKIAQKLGFENTFEAIAREWHQVRADRWSLRYR  120
            LAEAR KR+ A+K+++ G DPGE K+ EK++QK++  NTF+A+A EWHQ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIDTFEKDVFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KD+FPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLKDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FL+ LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVALFESLKPITGLYPLVFI  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV  +++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESINQVIELLGYKGRVTGHGFRHTMSTILHEEGFDSAWIETQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHE+GF+SAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGAYNHAQYLDGRKEMMQWYADYITHL  389
            +IRG+YNHA Y+DGR+EMMQWYADYI  L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

106) S70_17360 in NC_017731


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  408 bits (1536),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 222/391 (57%), Positives = 311/391 (80%), Gaps = 0/391 (0%)

Query  1    MKLTVKQIDSSKPKEKDYKLSDGGGLYLLVKTNGGKYWRLKYRIDGKEKLLAIGVYPTVT  60
            M LT +Q+++++PKEKDYKLSD  GLYLLVKT G++YWRLKYRI GKEK LA+GVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   ladarrkrddakrlladGIDPNQQRKEQKQASKIDSVNTFKNIALEWYEGRKDRWSVGYR  120
            LA+AR KRDDA++++++G DP ++++ +K + KI + NTF  +A EW + +   WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDMMDAFEKDVFPYIGNRPIAEIKPMELLEVLSIMEKRGATEKLKKVRQRCGEVWKYAII  180
              +++A++KD+FPY+G+R++++I P+E+LE+L  +EKRG+ EKL+KVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFVPHKREHYAHLSVSELPDFLSSIDKYMGSQIVRVALRVLILTGV  240
            TGRA  NPA++L+S++ + K  H++HL   ELP FL  +  Y GS + R+A  +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEINFDTKIWEIPAEKMKMRRPHIVPLSEQVIDLLRQIHPISGSYQYIFP  300
            R  ELR AEWSEI+FD  +W IP  +MKMRR H+VPLS QV D+L+Q+  +SG Y+ +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SRTDYRKHISDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            +R D  K +S+ ++N +++R+GY GRATGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIDGRREMLQWYADYMGALEN  391
            SIRGTYNHA YIDGRREM+QWYADY+++L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

107) PC1_2828 in NC_012917


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  408 bits (1535),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 217/390 (56%), Positives = 306/390 (79%), Gaps = 2/390 (0%)

Query  1    MLLTDLKIKKAKAQDKPYTLNDGNGLSLLIDPKGTKGWRFRYQFANKPKLISFGTYDTVS  60
            M LT  ++  A++++K Y L+D  GL LL+   G++ WR++Y++A K K +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKRDEARSMLANGINPSDARRADKLSLLFSTENTFEAVAREWHTSKLTTWSEGYA  120
            LA+AR KRD+AR ++++G +P++ +R +KL+  +S+ NTF+A+A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KEVIHYLEKEIFPFLGKRPIDQITPLELLAVLQKIEKRGALEQASKIRRRCGEVFRYAVV  180
            + V++ L+K+IFP+LGKR++ +I PLE+L +L++IEKRG+LE+  K+R+ C ++FRYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAMYNPAPDLDLASAMNKPKNNHFPFLTESELPDFVQALNNYKGSQITKYATQLLMLT  240
            TGRA  NPA++L  +S++  PK  HFP L   ELP F++ L +Y GS +T+ AT+LL+LT
Sbjct  181  TGRATVNPASEL--TSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  GVRTIELRAAEWVEFDLDNALWEIPKERMKKRRPHLVPLSTQAVTILKELKVLTGYYQLV  300
            G+RTIELR+AEW E+D+DNALW IP  RMK RR H+VPLS Q   IL++LK ++G Y+LV
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGRNDTRKPMSDAAINKVIKMLGYHGRLTGHGFRHTMSTILHEHGFNSAWIETQLAHVD  360
            FPGR D  KPMS+A+IN V+K +GY+GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVD
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGTYNHAQYLEGRREMLQWYGEFTSE  390
            KNSIRGTYNHA Y++GRREM+QWY+++   
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDS  388

108) SMWW4_v1c00920 in NC_020211


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  408 bits (1537),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 307/390 (79%), Gaps = 0/390 (0%)

Query  1    MLLTDIQIRRSKPQEKPYTLNDGQGLSLLINTDGSKGWRFRYRYAGKAKLMSFGTYPLVT  60
            M LT  Q+  ++P+EK Y L+D +GL LL++T G++ WR++YR AGK K +++G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRGEARKQVANGIDPVAEKKAQKLARKLSVENSFEAISREWHTNKANRWTLAYR  120
            LA+AR KR++ARK +++G DP   K+ +KL++K+S  N+F+A++ EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMRTFEQDVFPYIGQRPIAEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FPY+G+R++++I PLE+LE+LRRIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPYFVKDLEGYTGSIITKNAAKIVMLTGV  240
            TGRA  NPA++L+S+LA PK  H P L A+ELP F++ L  Y GS +T+ A+++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWEEIDFERGIWEIPAERMKMRRPHIVPLSTQAVELLKQLQPITGHYPYIFI  300
            RT E+R A W EIDF+ ++W IP  RMKMRR H+VPLS Q  ++L+QL+ ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRRKPISKESVNQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR +  KP+S  S+N V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  GIRGTYNHAQYLEKRRVMLQWYADFISGLA  390
            +IRGTYNHA Y++ RR M+QWYAD+I +L+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

109) YE105_C2844 in NC_015224


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  408 bits (1534),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 213/384 (56%), Positives = 305/384 (80%), Gaps = 0/384 (0%)

Query  1    MLLNDFKIRSAKPTDKAYTLNDGKGLSLIISPNGVKGWRFRYQFGGKAHMISFGVYGPVS  60
            M L   ++ +A+P +K Y L+D +GL L++   G + WR++Y+++GK   +++GVY  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARRQREEAKSALANGTNPSDARKAEKIALKYPAKNTFEDIAREWHTSKLATWTPEYA  120
            LA+AR +R++A+  +++G +P++ ++ EK++ K +A NTF+ +A EWH  K  +W+  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DTVIRGFDNNVFPYIGKRPIDQIAPLELLAVLQRIEKRGALELTGKIRRRCGEVFRYAVV  180
             +V+ ++D+++FPY+GKR++ +I PLE+L +L+RIEKRG+LE   K+R+ C ++FRYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATYNPAPDLASALNRPKNGHYPFLTESELPEFIQALDNYKGSKQTKYATQLLMLTGV  240
            TGRAT NPA++L+S+L  PK +H+P L   ELP F++ L +Y GS  T+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWSEFDLDNALWEVPKERMKKRRPHLVPLSKQALAILEKLKVLTGNYKLVFP  300
            RTIELR+AEWSE+D+DNALW +P  RMK RR H+VPLS+Q   IL++LK ++G+Y+LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDAGKPMSEASINKVIKMLGYHGRATGHGFRHTMSTILHEKGYNSAWIETQLAHVDKN  360
            GR D  KPMSEASIN V+K +GY+GRATGHGFRHTMSTILHE+G+NSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYGD  384
            SIRGTYNHA Y++GRREM+QWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

110) YPTB3886 in NC_006155


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1532),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 236/389 (61%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDIKVKTAKPIDKAYKLTDGGGMYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVS  60
            M+LT  +V TA+P +K YKL+D  G+YLLVK  G++YWRLKYR+ GKEK L++GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKRDEARKVLAAGGDPGEVKKADKLAQKLSSENTFEAIAREWHKQKADRWSLRYR  120
            LA+AR KRD+ARK+++ GGDPGE K+ +KL+QK+S+ NTF+A+A EWH++K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYLGRRPIAEIKPMelletlrrlekrGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPYLG+R++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP F+R LA Y GS +T+ AT++++ TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFEKRLWEIPSEVIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFI  300
            RT ELR A W +IDF++ LW IP   +KM+R H+VPLS QV +++Q LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRAKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAHYLEGRREMMQWYGDNLESM  389
            +IRGTYNHA Y++GRREMMQWY+D ++S+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

111) YPTS_4103 in NC_010634


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1532),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 236/389 (61%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDIKVKTAKPIDKAYKLTDGGGMYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVS  60
            M+LT  +V TA+P +K YKL+D  G+YLLVK  G++YWRLKYR+ GKEK L++GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKRDEARKVLAAGGDPGEVKKADKLAQKLSSENTFEAIAREWHKQKADRWSLRYR  120
            LA+AR KRD+ARK+++ GGDPGE K+ +KL+QK+S+ NTF+A+A EWH++K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYLGRRPIAEIKPMelletlrrlekrGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPYLG+R++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP F+R LA Y GS +T+ AT++++ TG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFEKRLWEIPSEVIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFI  300
            RT ELR A W +IDF++ LW IP   +KM+R H+VPLS QV +++Q LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRAKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAHYLEGRREMMQWYGDNLESM  389
            +IRGTYNHA Y++GRREMMQWY+D ++S+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

112) YE105_C3845 in NC_015224


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1533),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 214/384 (56%), Positives = 306/384 (80%), Gaps = 0/384 (0%)

Query  1    MPLSDIQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLIS  60
            M+L+  Q+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDMARKQVADGTDPAEVKKADKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ +KL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLENGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++N+LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            GR D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRRDMLQWYAD  384
            SIRGTYNHA Y++ RR+M+QWYAD
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

113) A1122_05665 in NC_017168


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

114) YPA_4123 in NC_008150


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

115) xerC4 in NC_005810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

116) YPO4033 in NC_003143


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

117) YPD4_3547 in NC_017154


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

118) YPD8_3553 in NC_017160


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

119) y4052 in NC_004088


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

120) YPN_3680 in NC_008149


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

121) YPDSF_3775 in NC_009381


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  407 bits (1530),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 217/386 (57%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

122) YpAngola_A4153 in NC_010159


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  406 bits (1529),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 216/386 (56%), Positives = 306/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSEKSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ ++F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I PLE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

123) SEEH1578_21245 in NC_021810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  405 bits (1525),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 219/384 (58%), Positives = 308/384 (81%), Gaps = 0/384 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+  Q+  A+PK+K Y L+D  GL LL+ TTG++ WR++YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  120
            LA+AR KRD+AR +++ G +P+E ++ +K++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
            + VL+ +++DIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y+GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  300
            RTIELR+AEW+E+D+DNALW IP  RMK RR H+VPLS Q   IL++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  360
            GR D+ KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLENRRKMMQIYSD  384
            SIRGTYNHA Y++ RR MMQ Y+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

124) CFSAN002069_19870 in NC_021812


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  405 bits (1524),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 219/384 (58%), Positives = 308/384 (81%), Gaps = 0/384 (0%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+  Q+  A+PK+K Y L+D  GL LL+ TTG++ WR++YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  136
            LA+AR KRD+AR +++ G +P+E ++ +K++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  137  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  196
            + VL+ +++DIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  197  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  256
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y+GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  257  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  316
            RTIELR+AEW+E+D+DNALW IP  RMK RR H+VPLS Q   IL++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  317  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  376
            GR D+ KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  377  SIRGTYNHAQYLENRRKMMQIYSD  400
            SIRGTYNHA Y++ RR MMQ Y+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

125) SeHA_C2638 in NC_011083


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  405 bits (1524),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 219/384 (58%), Positives = 308/384 (81%), Gaps = 0/384 (0%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+  Q+  A+PK+K Y L+D  GL LL+ TTG++ WR++YR+AGK K +++GVY DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  136
            LA+AR KRD+AR +++ G +P+E ++ +K++ +++  N+F+++A EWH  K  +WSE+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  137  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  196
            + VL+ +++DIFP++G+R++ +I PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  197  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  256
            TGRA  N A++L+ +L  PK+ HFP L   ELP F+  L +Y+GS VT+ AT+LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  257  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  316
            RTIELR+AEW+E+D+DNALW IP  RMK RR H+VPLS Q   IL++L+ ++G+Y LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  317  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  376
            GR D+ KPMSEASIN V+K +GY+GR TGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  377  SIRGTYNHAQYLENRRKMMQIYSD  400
            SIRGTYNHA Y++ RR MMQ Y+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

126) YPC_4545 in NC_017265


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  405 bits (1523),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 216/386 (56%), Positives = 305/386 (80%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+ RQ+  A+P+EK Y LSD +GL LL+   G++ WR++YR+AGK + ++LG Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LAEAR KRD ARK +++G DP+E K+ EKL+Q++S+ N+F+A++ EWH+ K+  WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITQLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ +++ DIFPY+GKR++++I  LE+L++L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA  NPA++L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT E+R A W EID++ +LW IP  RMKMRR H+VPLS QV  +++QL  ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G  D +KP+S  ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHA Y++ RREM+QWYAD I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

127) plu0125 in NC_005126


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  404 bits (1520),  Expect = 4e-114, Method: Compositional matrix adjust.
 Identities = 238/392 (61%), Positives = 318/392 (82%), Gaps = 0/392 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKCLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQarekreaakkllSAGSDLGELKKAEKIAQKLNYDNTFEAIAREWHQLRADRWSLRYR  120
            LA+AR KR+ A+K++S G+D GE K+ EK++QK++  NTF+A+A EWHQ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRRRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVR+ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLKDLAGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FL+ LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFESLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYSDYIVSLPED  392
            +IRGTYNHA Y++GRREMMQWY+DYI SL+E+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

128) EC042_3992 in NC_017626


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  403 bits (1515),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 305/386 (80%), Gaps = 0/386 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LAEAR KRD ARK +++G DP E ++  +L+QK+S+ N+F+A+  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
              ++ ++++D+FP++GKR++++I PLE+LE+LRRIEKRG+LEK RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVVDLFKQLKPITGHYPYIFI  300
            RT E+R A W E+D+++++W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRNKPISKESVSQVIESLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR + NKP+S  S++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRKKMMNWYANHI  386
            SIRGTYNHA Y++GR+ MM+WYA+ I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

129) Y11_30661 in NC_017564


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  403 bits (1518),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 209/373 (57%), Positives = 303/373 (82%), Gaps = 4/373 (1%)

Query  2    KPKE----MTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVSLADARQKRETA  57
            +PKE    ++D  GLYL V ++GA+YWR+KYR +GKEK++A+GVYP+VSLA+AR KR+ A
Sbjct  12   RPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDA  71

Query  58   KKLLASGTDPAEVKKADKLAQRLSSENSFEAISREWHKAKADRWSLGYREEIMSTFEADI  117
            +K+++ G DP+E K+ +KL+Q++S+ N+F+A++ EWH+ K+  WS +Y   ++ +++ DI
Sbjct  72   RKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDI  131

Query  118  FPYIGKRPIAEITPLELLDVLQRIEKRGALEKTHKVRQRCGEVFRYAIITGRAEYNPAPD  177
            FPY+GKR++++I PLE+L++L+RIEKRG+LEK +KVRQ C ++FRYAI TGRA  NPA++
Sbjct  132  FPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASE  191

Query  178  LASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGVRTKEMRFATWQ  237
            L+S+L++PK  H+P L A+E+P F+R L  Y GS +T+ A+++L+LTG+RT E+R A W 
Sbjct  192  LTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWS  251

Query  238  EIDLESGLWEIPAERMKMRRPHIVPLSTHVIALFKQLLPITGHYPYIFIGRNDRKKPISK  297
            EID++++LW IP  RMKMRR H+VPLS +V  +++QL  ++G+Y  +F GR D +KP+S 
Sbjct  252  EIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSE  311

Query  298  ETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQY  357
             ++N V+  +GY GRATGHGFRHTMSTILHEQG++SAWIE+QLAHVDKNSIRGTYNHA Y
Sbjct  312  ASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALY  371

Query  358  LEKRRDMLQWYAD  370
            ++ RR+M+QWYAD
Sbjct  372  IDGRREMMQWYAD  384

130) ETAE_3428 in NC_013508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  403 bits (1516),  Expect = 7e-114, Method: Compositional matrix adjust.
 Identities = 210/386 (55%), Positives = 304/386 (79%), Gaps = 0/386 (0%)

Query  1    MALSDIQIKRAKPQDKPYTLNDGQGLSILIKPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MAL+  Q+  A+P++K Y L+D +GL +L+K  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKREVARKQVANGIDPVEERKAQKLAQQLSTENSFEAISREWHANKADRWTVAYR  120
            LAEAR KR+ ARK +++G DP E ++ +KL+Q++S+ N+F+A++ EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FP++GKR++ +I PLE+LE+LRRIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWDEVDFDKRIWEIPAERMKMRRPHIVPLSTQAMELFKQLQPITGHYPYIFI  300
            RT E+R A W E+DFD+ +W IP  RMKMRR H+VPLS Q  ++++QL+ ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRRKPISKESINQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHVDKN  360
            GR +  KP+S  SIN V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYSNYL  386
            SIRGTYNHA Y++ RREM+QWY++Y+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

131) PAU_01009 in NC_012962


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 249/393 (64%), Positives = 326/393 (83%), Gaps = 3/393 (0%)

Query  1    MKLTARQIDTAKPKDKSYKLSDGGGMYLEIFPNGSKCWRLKYRFAGKEKRLAFGTYPTVT  60
            M LTARQ++TA+PK+K YKLSD  G+YL +   G++ WRLKYR+AGKEK+LA+G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaearkkredakkILANGNDPGLVKRQEKREKALIINNSFEKIALEWHTYKLPNWSKGYA  120
            LAEAR KR+DA+KI+++G DPG  KR+EK  + +   N+F+ +A EWH  K  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDLLEGFTKDIFPFIGKHAITDIKPLDMLTVLRKMEQRGVLDKLKKIRQACNQVFRYAIV  180
              +LE++ KDIFP++GK+++TDI PL+ML +LR++E+RG L+KL+K+RQ CNQ+FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPTAELAGALATPKAKHFPHLNVDELPAFLQALSFYSGSKITQIAtklllltgl  240
            TGRA  NP++EL+++LA+PKA HFPHL  DELP FL+ L+ Y GS +T++AT+LLLLTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  rtielRASTWTEIDFDKAIWEIPQERMKMRRPHIVPLSEQalallkelaaITGRFNFVFH  300
            RTIELR++ W+EIDFD+A+W IP+ RMKMRR H+VPLS Q   +L++L +++G++ +VF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDASKPMSEAAINAINQVLKRIGYDGRATGHGFRHTMSTILHEQGYNTAWIETQLAHV  360
            GR D +KPMSEA+IN    VLKRIGYDGRATGHGFRHTMSTILHEQG+N+AWIE QLAHV
Sbjct  301  GRCDINKPMSEASINM---VLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  361  DKNSIRGTYNHAQYLDGRREMLQWYADYMDMLE  393
            DKNSIRGTYNHA Y+DGRREM+QWYADY+D L 
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQWYADYIDSLS  390

132) KO11_04405 in NC_017660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWH+ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR L+ Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHA Y++GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

133) EKO11_0064 in NC_016902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWH+ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR L+ Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHA Y++GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

134) LY180_18845 in NC_022364


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWH+ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR L+ Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHA Y++GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

135) ECW_m3936 in NC_017635


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWH+ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR L+ Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHA Y++GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

136) WFL_19235 in NC_017664


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1512),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 317/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWH+ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR L+ Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV ++++ LK ++G Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHA Y++GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

137) intS in NC_013892


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  402 bits (1513),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 208/390 (54%), Positives = 298/390 (77%), Gaps = 0/390 (0%)

Query  1    MKLTDMAIKRAKPKEKSYMLADGNGLSLLVETNGSKGWRYRYQFTGKTKMISLGIYPVVT  60
            M LT   +  A+PKEK Y L+D  GL LLV T G++ WR +Y+++GK K ++LG+YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTEARAKRDEARKQVANGINPSEARKAEKVASISQSENTFKNIALEWYEGRKDRWSVGYR  120
            L+EAR KRD+ARK +++G +P+E ++ EK++    + NTF  +A EW + +   WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDMMDAFEKDVFPYIGDRPIADIKPMELLEVLSVMEKRGTTEKLKKVRQRCGEVWKYAII  180
              +++A++KD+FPY+G R+++DI P+E+LE+L  +EKRG+ EKL+KVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFVPHKREHYAHLSVSELPEFLSSIDKYMGSQIVRVALRILILTGV  240
            TGRA  NPA++L+S++ + K  H++HL   ELP FL  +  Y GS + R+A  +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEINFDIGIWEIPAEKMKMRRPHIVPLSEQVIELLKQIHPISGSYQYIFP  300
            R  ELR AEWSEI+FD ++W IP  +MKMRR H+VPLS QV ++L+Q+  +SG Y+ +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SRTDYRKHISDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQGYNTAWIEAQLAHVDKN  360
            +R D  K +S+ ++N +++R+GY GRATGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMETLE  390
            SIRGTYNHA Y+DGRREM+QWYADY+++L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

138) P12B_c3788 in NC_017663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  400 bits (1504),  Expect = 7e-113, Method: Compositional matrix adjust.
 Identities = 240/392 (62%), Positives = 316/392 (81%), Gaps = 0/392 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYKNTFEAIAREWHQLRADRWSLRYR  120
            LAEAR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWHQ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LRR+EKRG+LEK+RKVRQ C ++FR AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLAGYTGSVITKTATQIIMLTGV  240
            TGRA  NPA++L+++LA+PK +HFP L A+ELP FLR LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVQLFGSLKPITGLNPLVFV  300
            RT ELR A W +I+F++ LW IP   MKM+R H+VP+S QV +++  LK ++G   LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYADYITSNAKH  392
            +IRGTYNHA Y++GRREMMQWYADYI S + +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

139) EbC_44590 in NC_014306


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  397 bits (1493),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 208/384 (55%), Positives = 303/384 (79%), Gaps = 0/384 (0%)

Query  1    MPLTDIQIRRAKPLDKPYTMNDGQGLALLINPDGSKGWRFRYRYAGKARLMSFGSYSLVS  60
            M+LT  Q+  A+P +K Y ++D +GL LL++  G++ WR++YR AGK + +++G Y+ VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDTARKQVANGIDPVEERKAQKLAQQLSSENSFEAISKEWHANKADRWTLAYR  120
            LAEAR KRD ARK +++G DP E ++ +KL+Q++S+ N+F+A++ EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEILKTFEQDVYPFIGRRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
              +L ++++D++P++G+R++++I PLE+LE+LRRIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPHFISDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+S+LA PK  H P L A+ELP F+  L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFASWCEVDLVKGVWEIPAERMKMRRPHIVPLSTQVIDLFKQLKLITGHYPYIFI  300
            RT E+R A W E+D+ +++W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKETVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR + +KP+S  +++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  NIRGTYNHALYIKQRKSMLQWYSD  384
            +IRGTYNHALYI  R+ M+QWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

140) ECA3460 in NC_004547


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  397 bits (1492),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 214/367 (59%), Positives = 300/367 (82%), Gaps = 0/367 (0%)

Query  37   IGDGLGLSLLIEPTGSKSWRFRYRFGGKPKMISFGAYPLVSLAEARKKRDEARKQVLDGI  96
            ++D  GL LL+  TG++ WR++YR++GK K +++G YP VSLAEAR KRD+ARK + +G 
Sbjct  20   LSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGG  79

Query  97   NPSEHRKAQKLNLMSESENTFETIAREWHTMKSVCWSVGYASDIMEAFRNDIFPYVGKRS  156
            +P+E ++ +KL     + NTF+++A EWH  KS+ WS +YA  ++EA+ +DIFPY+GKRS
Sbjct  80   DPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRS  139

Query  157  IAEVKPLELLNVMRKMEKRGALEKMKKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVH  216
            ++++ PLE+L+++R++EKRG+LEK++KVRQ C+++FRYAIATGRA  NPA++L+S+L   
Sbjct  140  VTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAP  199

Query  217  QSHHFPFLKADEIPDFLRALEGYTGSKLVRIATKLLLITGVRTIELRAALWSEFDLGNAI  276
            ++ HFP L+ADE+P FLR L  Y GS + R+AT+LLL+TG+RTIELR+A WSE+D++NA+
Sbjct  200  KAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNAL  259

Query  277  WEIPEERMKKRRAHLVPLSTQALDLLNELKIMTGNYRYVFPGRNNPNKPMSEASINQVIK  336
            W IPE RMK RR H+VPLS Q  D+L++LK  +G+YR VFPGR + NKPMSEASIN V+K
Sbjct  260  WTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLK  319

Query  337  RIGFGGEVTGHGFRHMLSTILHEEGFDSSFIEIQLAHVDRNSIRGTYNHAQYLEKRRHMM  396
            RIG++G  TGHGFRH +STILHE+GF+S+ IE+QLAHVD+NSIRGTYNHA Y++ RR+MM
Sbjct  320  RIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMM  379

Query  397  QYYSDYV  403
            Q Y+DY+
Sbjct  380  QWYADYI  386

141) EcSMS35_4002 in NC_010498


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  396 bits (1490),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 209/384 (55%), Positives = 302/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LAEAR KRD ARK +++G DP E ++  +L+QK+S+ N+F+A+  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
              ++ ++++D+FP++GKR++++I PLE+LE+LRRIEKRG+LEK RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVVDLFKQLKPITGHYPYIFI  300
            RT E+R A W E+D+++++W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKESVSQVIELIGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHVDKN  360
            GR + +KP+S  S++ V+  IGY GRATGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  RIRGTYNHAQYLEHRKKMMQWYSD  384
             IRGTYNHA Y++ R+ MMQWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

142) PAU_02730 in NC_012962


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  395 bits (1485),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 208/390 (54%), Positives = 297/390 (77%), Gaps = 0/390 (0%)

Query  1    MKLTDLAIKRAKPKEKAYTLADGNGLSLLIDTKGSKGWRYRYQFAGKTKMISLGVYPVVT  60
            M LT   +  A+PKEK Y L+D  GL LL+ T G++ WR +Y++AGK K ++LGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTEARAKRDEARKLVANGINPSEARKAEKTAAINQTEHTFKNIALEWYNSRKDRWSVGYR  120
            L+EAR KRD+ARK++++G +P+E ++ EK +    + +TF  +A EW + +   WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDMMSAFENDVFPYIGDRPIAEIKPLELLEVLSIMEKRGTTEKLKKVRQRCGEVWKYAII  180
              ++ A+++D+FPY+G R++++I PLE+LE+L  +EKRG+ EKL+KVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFIPHKREHYAHLSVGELPEFLRSIDKYMGSQIVRTALRILILTGV  240
            TGRA  NPA++L+S++ + K  H++HL  +ELP FLR +  Y GS + R A  +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEIDLDKAIWEISAEKMKMRRAHIVPLSEQVINLLKQIQPISGSYQYVFP  300
            R  ELR AEWSEID+D+A+W I+  +MKMRR H+VPLS QV ++L+Q++ +SG Y+ VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SRTDYRKHLSDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQNYPSEWIETQLAHVDKN  360
            +R D  K +S+ ++N +++R+GY GRATGHGFRHTMSTILHEQ + S WIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDALE  390
            SIRGTYNHA Y+DGRREM+QWYADY+D+L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

143) Spro_3887 in NC_009832


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  395 bits (1485),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 205/390 (53%), Positives = 299/390 (77%), Gaps = 0/390 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LT  ++  ++P++K Y LSD  GL +L+   G++ WR++YR+ GK K L+LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTDARQKRDEAKKLVVSGINPSEARKQQKRDRQDVTGNTFEGIAREWYEKRRDRWSESYA  120
            L++AR KRD+A+K++  G +P+E ++++K  ++  + NTF+++A EW + +   WSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMKTFESDVFPYIGNRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
              ++ +++ D+FPY+G+R++++I P+E++  L +++ RG+ EKLRKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPEFFRIFNTYTGSLIVKLAMRLLIITGT  240
            TGRA  NPA++L+S++++ K  H++ L   ELP F+R +  Y GS + ++A  LL++TG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSFVFP  300
            R  ELR AEWSE+DFDN LW +P  RMK RR H VPLS Q   IL+QLK ++G+Y +VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLE  390
            SIRGTYNHA Y+DGRREM+QWYADY+DSL 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

144) A79E_0092 in NC_018522


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 211/384 (55%), Positives = 300/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P+EK Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LAEAR KR+ +RK +++G DP E ++ +KL+QK+S+ N+F+A+  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
              ++ +++KD+FP++GKR+ ++I PLE+LE+LRRIEKRG+LEK RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATGDEIDLEKAIWEIPAERMKMRRPHIVPLSTQVIDLFRQLKPITGHYPYIFI  300
            RT E+R A   EID+++A+W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR + +KP+S  S++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYIEDRTKMMQWYSD  384
             IRG YNHA YI++R  MMQWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

145) KP1_5380 in NC_012731


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 211/384 (55%), Positives = 300/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P+EK Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LAEAR KR+ +RK +++G DP E ++ +KL+QK+S+ N+F+A+  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
              ++ +++KD+FP++GKR+ ++I PLE+LE+LRRIEKRG+LEK RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATGDEIDLEKAIWEIPAERMKMRRPHIVPLSTQVIDLFRQLKPITGHYPYIFI  300
            RT E+R A   EID+++A+W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR + +KP+S  S++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYIEDRTKMMQWYSD  384
             IRG YNHA YI++R  MMQWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

146) SerAS12_4096 in NC_015566


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 205/389 (53%), Positives = 297/389 (77%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LT  ++  ++P++K Y LSD  GL +L+   G++ WR++YR+ GK K L+LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L++AR KRD+A+K+++ G +P+E ++++K  ++  + NTF+++A EW   +   WSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
              ++ +++ D+FPY+G R++++I P+E++  L +++ RG+ EKLRKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA  NPA++L+S++++ K  H++ L   ELP F+R +  Y GS + ++A  LL++TG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR AEWSE+DFDN LW +P  RMK RR H VPLS Q   IL+QLK ++G+Y  VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHA Y+DGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

147) SerAS13_4096 in NC_017573


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 205/389 (53%), Positives = 297/389 (77%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LT  ++  ++P++K Y LSD  GL +L+   G++ WR++YR+ GK K L+LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L++AR KRD+A+K+++ G +P+E ++++K  ++  + NTF+++A EW   +   WSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
              ++ +++ D+FPY+G R++++I P+E++  L +++ RG+ EKLRKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA  NPA++L+S++++ K  H++ L   ELP F+R +  Y GS + ++A  LL++TG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR AEWSE+DFDN LW +P  RMK RR H VPLS Q   IL+QLK ++G+Y  VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHA Y+DGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

148) SerAS9_4095 in NC_015567


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 205/389 (53%), Positives = 297/389 (77%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LT  ++  ++P++K Y LSD  GL +L+   G++ WR++YR+ GK K L+LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L++AR KRD+A+K+++ G +P+E ++++K  ++  + NTF+++A EW   +   WSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
              ++ +++ D+FPY+G R++++I P+E++  L +++ RG+ EKLRKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA  NPA++L+S++++ K  H++ L   ELP F+R +  Y GS + ++A  LL++TG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR AEWSE+DFDN LW +P  RMK RR H VPLS Q   IL+QLK ++G+Y  VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR + +KP+SE ++N++++RIGY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHA Y+DGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

149) YPK_0061 in NC_010465


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  393 bits (1480),  Expect = 6e-111, Method: Compositional matrix adjust.
 Identities = 238/390 (62%), Positives = 322/390 (83%), Gaps = 0/390 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT RQ++TA+PKEK YKLSD  GLYL V T G+RYWRLKYR AGKEK+LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQarekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHQLRADRWSLRYR  120
            LA+AR KR+ A+K++S G+DPGE K+ EK++QK++  NTF+A+A EWHQ ++  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPLELLETLRKMEKRGALEKMRKVRQRCGEVYRYAII  180
              ++++++KDIFPY+GKR++++I PLE+LE LR++EKRG+LEK+RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNpapdlataltppKKQHFPFLTAEELPYFLKNLAGYTGSVitktatkiilltaV  240
            TGRA  NPA++L+++L++PK  HFP L A+ELP FL++LA Y GS +T+ AT+++LLT++
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFTRWQDIDLEKGIWEIPAEVMKMKRPHVVPLSKQVIELFNSLKPLSGHYELVFI  300
            RT ELR + W +ID+++++W IP   MKM+R HVVPLS+QV ++++ LK +SG+Y LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDHRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGYNSAWIETQLAHIDKN  360
            GR D  KP+S  S+N V+  +GY GR TGHGFRHTMSTILHE+G+NSAWIE QLAH+DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYMDGRREMMQWYADYLDALE  390
            +IRGTYNHA Y+DGRREMMQWYADY+D+L 
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

150) ECO26_4941 in NC_013361


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  393 bits (1479),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 211/384 (55%), Positives = 300/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            LAEAR KRD ARK +++G DP E ++ +KL+QK+S+ N+F++++ EWH  K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FP++GKR++++I PLE+LE+L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFVRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWQELDLEKGLWEIPAERMKMRRPHIVPLSRQVIRLFQQLKPITGHYPYIFI  300
            RT E+R A W E+D++++LW IP  RMKMRR H+VPLSRQV  ++QQLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRKKPISKESINQVIELLGFKGRITGHGFRHTMSTILHEAGFNSAWIEMQLAHVDKN  360
            GR + +KP+S  SIN V+  +G+ GR TGHGFRHTMSTILHE GFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGVYNHAQYLNGRSRMLQFYAD  384
            SIRG YNHA Y++GR  M+Q YAD
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

151) SEEH1578_04845 in NC_021810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  393 bits (1479),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 211/384 (55%), Positives = 300/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            LAEAR KRD ARK +++G DP E ++ +KL+QK+S+ N+F++++ EWH  K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FP++GKR++++I PLE+LE+L+RIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFVRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWQELDLEKGLWEIPAERMKMRRPHIVPLSRQVIRLFQQLKPITGHYPYIFI  300
            RT E+R A W E+D++++LW IP  RMKMRR H+VPLSRQV  ++QQLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRKKPISKESINQVIELLGFKGRITGHGFRHTMSTILHEAGFNSAWIEMQLAHVDKN  360
            GR + +KP+S  SIN V+  +G+ GR TGHGFRHTMSTILHE GFNSAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGVYNHAQYLNGRSRMLQFYAD  384
            SIRG YNHA Y++GR  M+Q YAD
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

152) EcolC_0053 in NC_010468


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  392 bits (1476),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 205/384 (54%), Positives = 303/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDTQIKRAKPQDKPYTLNDGQGLSLLINPDGTKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LAEAR KRD ARK +++G DP E ++  +L+QK+S+ N+F+A+  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
              ++ ++++D+FP++GKR++++I PLE+LE+LRRIEKRG+LEK RKVRQ C +++RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIQDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F++ L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRLATWNEVDLEKGIWEIPAERMKMRRPHIVPLSTQVIALFEQLKPITGHYPYIFI  300
            RT E+R A W+E+D+++++W IP  RMKMRR H+VPLS QV  +++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKESVSQVIELLGYKGRATGHGFRHSLSTILHEHGFDSAWIEMQLAHVDKN  360
            GR + +KP+S  S++ V+  +GY GRATGHGFRH++STILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRLHMMQWYSD  384
            SIRGTYNHA Y++ R +MMQWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

153) ENC_02820 in NC_021046


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  392 bits (1474),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 203/384 (53%), Positives = 298/384 (78%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSMLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL +L++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRDTARKQVANGIDPVEERKALKLAQKLSTENSFESVSREWHSTKADRWTVAYR  120
            LAEAR KRD ARK +++G DP E ++  KL+QK+S+ N+F++++ EWH  K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FP++GKR++ +I PLE+LE+LRRIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVHKQKHHPFLSSEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA  NPA++L+ +LA  K  H P L ++ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWDEVDLDKGVWQIPAERMKMRRPHLVPLSTQVIDLFKQLKPITGHYPYIFI  300
            RT E+R A W E+D+D+++W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKETVSQVIELLGYKGRATGHGFRHTMSTILHEQGFESAWIEMQLAHADKN  360
            GR + +KP+S  +++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAH DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYLEERKKMLQWYSN  384
             IRG YNHA Y++ R+ M+QWY++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

154) PputGB1_0681 in NC_010322


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  391 bits (1472),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 213/390 (55%), Positives = 297/390 (77%), Gaps = 0/390 (0%)

Query  1    MPLTALQVKNAAPRERDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTVDKVT  60
            M+LTA QV  A P+E+DY L+D  GL+L ++++G++ WR+++R+ GK+  ++LG    V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARQLASESRQLVAQGRHPGLERKVARAQAAISRANTFKSLALEWHQHKSQRWSVGYA  120
            LA+AR    ++R+++++G +PG  ++  +    IS +NTF +LA EWHQHKS  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  NDVMEAFELDIFPLLGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
              V+EA++ DIFP LG  ++TDI P++ L+++RRIE RG+LEKLRKVRQ C++++R+AIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPISDIGGALQTPTSRHYPFLPIAELPELIRSFQACPGHDVVKIATRLLILTGV  240
            TGRA  NP S++ ++L +P + H+P L   ELP ++R +    G  V ++AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTAELRGALWSEFDLKDALWQIPASRMKMRRAHLVPLSKQAVAALSELEGITGGYTLAFP  300
            RT ELR+A WSE+D+ +ALW IP SRMKMRR H+VPLS+Q    L +L  ++G Y L FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYRSEWVETQLAHVDKN  360
            GR D  KPMSEA+IN +LKR GYDGRATGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYAEHLEALS  390
            SIRGTYNHA Y++GRREM+QWYA+ +++LS
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

155) A3UG_00595 in NC_018079


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  391 bits (1469),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 199/386 (52%), Positives = 302/386 (79%), Gaps = 0/386 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYGLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRETARKQVANCIDPVQERKAQKLAQQLSTENSFESICREWHANKANRWTVAYR  120
            LAEAR KR+ ARK +++  DP + ++ +KL+Q++S+ N+F+++  EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIENRGALEKTRKVRQRCGEVYRYAVI  180
              ++ ++++D+FP++GKR++++I PLE+LE+LRRIE+RG+LEK RKVRQ C +++RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIQDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F++ L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVIDLFKQLKPITQNYPYIFI  300
            RT E+R A W E+D+++++W IP  RMKMRR H+VPLS QV D+++QLK ++ +Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKESVSHVIELLGYKGRATGHGFRHTMSTILHEKGFDTQWIELQLAHIDKN  360
            GR + +KP+S  S++ V+  +GY GRATGHGFRHTMSTILHE+GF++ WIE+QLAH+DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGIYNHALHIENRRIMLQWYADYL  386
            SIRG YNHAL I+ RR M+QWYADY+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

156) Psest_4016 in NC_019936


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  386 bits (1450),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 207/391 (53%), Positives = 297/391 (76%), Gaps = 0/391 (0%)

Query  1    MPLTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVT  60
            M+LTA QV +A P+  DY L+D  GL+L ++++G++ WR+++R+ GK+  ++LG    V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARQLASDARQLVAQGRHPGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYA  120
            LA+AR    DAR+++++G +PG  ++  +    +S +NTF +LA EWHQHK+  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  GDVVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
              V+EA++ D+FP +G  ++TDI P++ L+++RRIE RG+LEKLRKVRQ C++++R+AIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGV  240
            TGRA  NP +++ ++L +P + H+P L   E+P ++R +    G  V ++AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTAELRGVPWSEFDLDKALWLIPAARMKMRRAHLVPLSQQAVAVLRELERITGGYTLAFP  300
            RT ELR+  WSE+D+D+ALW IP +RMKMRR H+VPLS+Q   +L++L  ++G Y L FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKN  360
            GR D  KPMSEA+IN +LKR GYDGRATGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYANHVDELHD  391
            SIRGTYNHA Y++GRREM+QWYA+ +D L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

157) SU5_02989 in NC_017623


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  386 bits (1453),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 209/360 (59%), Positives = 293/360 (82%), Gaps = 0/360 (0%)

Query  2    GLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEA  61
            GL LL+ TTG++ WR++YR+AGK K +++GVY DVSLA+AR KRD+AR +++ G +P+E 
Sbjct  25   GLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEK  84

Query  62   RKANKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIE  121
            ++ +K++ +++  N+F+++A EWH  K  +WSE+YA+ VL+ +++DIFP++G+R++ +I 
Sbjct  85   KRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDIL  144

Query  122  PLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHF  181
            PLE+L +L++IEKRG+LE+  K+R+ C +++RYA+ATGRA  N A++L+ +L  PK+ HF
Sbjct  145  PLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHF  204

Query  182  PFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPK  241
            P L   ELP F+  L +Y+GS VT+ AT+LL+LTG+RTIELR+AEW+E+D+DNALW IP 
Sbjct  205  PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPE  264

Query  242  ERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYH  301
             RMK RR H+VPLS Q   IL++L+ ++G+Y LVFPGR D+ KPMSEASIN V+K +GY+
Sbjct  265  SRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYD  324

Query  302  GRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSD  361
            GR TGHGFRHTMSTILHE GF+SAWIEMQLAHVDKNSIRGTYNHA Y++ RR MMQ Y+D
Sbjct  325  GRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYAD  384

158) PST_0259 in NC_009434


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  386 bits (1453),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 208/391 (54%), Positives = 297/391 (76%), Gaps = 0/391 (0%)

Query  1    MPLTALQVKSAAPRESDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVT  60
            M+LTA QV +A P+E DY L+D  GL+L ++++G++ WR+++R+ GK+  ++LG    V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVQARQLASDARQLVAQGRHPGLERKAMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYA  120
            L +AR    DAR+++++G +PG  ++  +    +S +NTF +LA EWHQHK+  WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  GDVMEAFELDVFPQVGNLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
              V+EA++ D+FP +G+ ++TDI P++ L+++RRIE RG+LEKLRKVRQ C++++R+AIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPIADIGGALQTPTSRHYPFLPIAELPALIRSIQACPGHDVVKIATRLLILTGV  240
            TGRA  NP +++ ++L +P + H+P L   ELP ++R +    G  V ++AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTAELRGAPWSEFDLDQALWLIPAARMKMRRAHLVPLSNHAVAALRELERITGGYTLAFP  300
            RT ELR+A WSE+D+D+ALW IP +RMKMRR H+VPLS +    L++L  ++G Y L FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKN  360
            GR D  KPMSEA+IN +LKR GYDGRATGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYANHLDELHD  391
            SIRGTYNHA Y++GRREM+QWYA+ +D L +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

159) intS in NC_014228


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  386 bits (1452),  Expect = 9e-109, Method: Compositional matrix adjust.
 Identities = 207/370 (56%), Positives = 292/370 (79%), Gaps = 0/370 (0%)

Query  1    MKLTARQVETVKPQEKDFKLSDGGGLYLLVKVNGSKYWRLKYRIAGKEKLLAIGTFPLVT  60
            M LTARQVET +P+EKD+KLSD  GLYLLVK  G++YWRLKYRIAGKEK LA+G +P V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARRKRDEAKKLIAEGIDPNQDKKQKKLAAQGEISNTFESIAREWYEGRKDRWSVGYR  120
            LAEAR KRD+A+K+I+EG DP + K++ KL+ +   +NTF+++A EW + +   WS +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDMMDAFEKDVFPYIGHRPIAEIKPLELLDLLSIMEKRGVTDKLKKVRQRCGEVWTYAII  180
              +++A++KD+FPY+G R++++I PLE+L++L  +EKRG  +KL+KVRQ C ++  YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAFIPHQREHYAHLSVDELPEFLRSIDKYMGSQIVRTALRMLILTGV  240
            TGRA  NPA++L+S++ + +  H++HL  DELP FLR +  Y GS + R A  +L+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RPGELRKAEWSEIDLDKAVWTIPAEKMKMRCTHVVPLSEQVINLLKQIQPISGNYQYVFP  300
            R  ELR AEWSEID+D+A+WTIP  +MKMR  HVVPLS QV ++L+Q++ +SG+Y+ VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SRTDYRKHISDMAINTMIRRMGYSGRATGHGFRHTMSTILHDQDYNTEWVEKQLAHVDKN  360
            +R D  K +S+ +IN +++R+GY GRATGHGFRHTMSTILH+Q++N+ W+E QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYSRII  370
            SIRGTY++ +
Sbjct  361  SIRGTYNHAL  370

160) Spro_0108 in NC_009832


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  383 bits (1441),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 212/386 (55%), Positives = 303/386 (79%), Gaps = 0/386 (0%)

Query  1    MLLTDIQIRRSKPQEKPYTLNDGQGLSLLINTDGSKGWRFRYRYAGKAKLMSFGTYPLVT  60
            M LT  Q+  ++P+EK Y L+D +GL LL++T G++ WR++YR AGK K +++G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKRGEARKQVANGIDPVADkkaqklaqklSFENSFEAISREWHTNKADRWTLAYR  120
            LAEAR KR++ARK +++G DP   K+ +KL+QK+S  N+F+A++ EWH +K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIMRTFEQDVFPHIGQRPIAEIKPLELLEVLRRIEKRGALEKTRKIRQRCGEVFRYAII  180
              ++ ++++D+FP +G+R++++I PLE+LE+LRRIEKRG+LEK RK+RQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPYFVKDLEGYTGSIITKNAAKIVMLTGV  240
            TGRA  NPA++L+S+LA PK  H P L A+ELP F++ L  Y GS +T+ A+++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWEEIDFERAIWEIPAARMKMRRLHIVPLSTQVVELFKQLQPITGHYPYIFI  300
            RT E+R A W EIDF+ A+W IP +RMKMRR H+VPLS QV ++++QL+ ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRRKPISKESVNQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR +  KP+S  S+N V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  GIRGTYNHAQYFAQRQSMMQWYSDNI  386
            +IRGTYNHA Y+  R+ MMQWY+D I
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

161) SARI_03887 in NC_010067


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  381 bits (1433),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 207/384 (54%), Positives = 302/384 (79%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALT  Q+  A+P++K Y L+D +GL LL++  G++ WR+++R+AGK + +++G Y  VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaearekrdaarkQVANGIDPVEERKALKLAQKLSTENSFESVSREWHSTKADRWTVAYR  120
            LAEAR KRD ARK +++G DP E ++  KL+QK+S+ N+F++++ EWH  K+  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
              ++ ++++D+FP++GKR++ +I PLE+LE+LRRIEKRG+LEK RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA  NPA++L+ +LA PK  H P L A+ELP F+R L  Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQEMRFATWDEVNLEKGIWEIPAERMKMRRPHIVPLSTQVIDLFKQLKPITGHYPYIFI  300
            RT E+R A W E+++++++W IP  RMKMRR H+VPLS QV D+++QLK ++G+Y  +F 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHTDKN  360
            GR + +KP+S  S++ V+  +GY GRATGHGFRHTMSTILHEQGF+SAWIE+QLAH DKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAIYLENRRIMLQWYSD  384
            +IRGTYNHA+Y++ RR M+QWY+D
Sbjct  361  SIRGTYNHALYIDGRREMMQWYAD  384

162) ENC_24500 in NC_021046


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  378 bits (1421),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 220/389 (57%), Positives = 291/389 (75%), Gaps = 2/389 (0%)

Query  1    MKLNARQVETAKPAEKDYKLPDGNGLILLVKTSGAKYWRYRYTFAGKEKMLALGVYPAVS  60
            M L ARQVETA+P EKDYKL+D  GL LLVKT+GA+YWR +Y +AGKEK LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaaarekrdearrNVAAGVDPV--KAKSHVaaaaaKTITFKEIATEWHEFKKPRWSPGYA  118
            LA AR KRD+AR+ ++ G DP   K K  ++   + T TF  +ATEWH+ K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  SDILEAFNKDIFPAVGKLPVAEIEPVQMLTALRKIENRGATEKAAKTRRWCGEVFSYAVA  178
              +LEA++KDIFP +GK +V++I P++ML  LR+IE+RG+ EK  K R+ C ++F YA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  TGRAKYNPVSELNSAMTGHKGESFPFLTAEELPDFLAALESYKGSPLPRLGLQIMMLAGL  238
            TGRA  NP SEL S++++ K+  FP L A+ELP FL  L  Y GSP+ R++ ++++L+GL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RTYELRHSKWEWVDFDNQLWEIPAEFMKTDRPHLVPLSEQLVVLLKELHGLTGRYVNMFP  298
            RT ELR + W  +DFDN LW IP   MK  R H+VPLS Q+  +L++L  ++G+Y  +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  299  GRNDPSKVMSENTINRMIHTLGYKGRVVGHGFRHTFSTILNDKGFNSDWVELQIAHVDKN  358
            GR D +K MSE +IN ++  +GY GR  GHGFRHT STIL+++GFNS W+E+Q+AHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  NIRGVYNHALYMEGRREMMQWYADYIDQL  387
            +IRG YNHALY++GRREMMQWYADYID L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

163) SBG_2173 in NC_015761


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  375 bits (1410),  Expect = 2e-105, Method: Compositional matrix adjust.
 Identities = 197/392 (51%), Positives = 289/392 (74%), Gaps = 2/392 (0%)

Query  1    MALTNVQIKNAAPGETDYTLSDGSGLFIIIKPQGSKLWRFRYRREGKLRRLSLGAYPEIS  60
            MALT  Q+  A P E DY LSD  GL++++K  G++ WR++YR  GK ++L+LG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSQARIKAAEARAKLAQGISPVDERREQKEASKV--INSFEGVCLEWQATRKATWSESYA  118
            L++ARIK  +AR  +++G  P + +R +K + K+   N+F+++  EW+  +  +WSESYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  DDTKRLFERNVFPVLGARPIGDIQPLELLDLLRKIEDRGANELATKVRRRCGEVYAYAIV  178
                  +++++FP LG R++ DI PLE+L++LR+IE RG+ E   KVR+ C +++ YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  TGRAKYNPARDLATAMQRFQRGHYASLDTADLPAFLTALEATTGNIMVNLAVRLLMLTGL  238
            TGRA  NPA +L++++   + +H++ L + +LP FL  L    G+ +  +A  LL+LTGL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RPGELRKGEWKEIDIDNALWEIPAERMKARRPHLVPLSKQAIELLRSVKAISGNYSLMFP  298
            R  ELR +EW EID+DNALW IP  RMK RR H+VPLS+Q  ++L+ +K++SG+Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  299  GRNDVTRPMSDMAMNQLIKRCGYGEKLTGHGFRHMMSTILHEKGFNSAWIELQLAHVDKN  358
            GR D+ +PMS+ ++N ++KR GY+ + TGHGFRH MSTILHE+GFNSAWIE+QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  TIRGTYNRAQYLEGRREMMQWYADHLQSLKTQ  390
            +IRGTYN+A Y++GRREMMQWYAD ++SL  Q
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

164) CFSAN001992_09575 in NC_020307


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  374 bits (1407),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 215/389 (56%), Positives = 290/389 (75%), Gaps = 2/389 (0%)

Query  1    MKLNARQVETAKPGEKDYKLPDGNGLILLVKTSGAKYWRYRYTFAGREKMLALGVYPAVS  60
            M L ARQVETA+P EKDYKL+D  GL LLVKT+GA+YWR +Y +AG+EK LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaaarekrdearrNVAAGVDPV--KVKSHVaaaaaNSITFKDIAIEWHEFKKPRWSPGYA  118
            LA AR KRD+AR+ ++ G DP   K K  ++   + + TF  +A EWH+ K   WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  SDILEAFNKDIFPAVGKLPVAEIEPVQMLTALRKIENRGATEKAAKTRRWCGEVFSYAVA  178
              +LEA++KDIFP +GK +V++I P++ML  LR+IE+RG+ EK  K R+ C ++F YA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  TGRAKYNPVSELNSAMTGHKGESFPFLTAEELPDFLAALEGYKGSPLPRLGLQIMMLAGL  238
            TGRA  NP SEL S++++ K+  FP L A+ELP FL  L  Y GSP+ R++ ++++L+GL
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RTYELRHSKWEWVDFDNRLWEIPAEFMKMDRPHLVPLSDQLVVLLKELHGLTGRFVNMFP  298
            RT ELR + W  +DFDN LW IP   MKM R H+VPLS Q+  +L++L  ++G++  +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  299  GRNDPSKVMSENTINRMIHTLGYKGRVVGHGFRHTFSTILNDRGFNSDWVELQIAHVDKN  358
            GR D +K MSE +IN ++  +GY GR  GHGFRHT STIL+++GFNS W+E+Q+AHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  NIRGVYNHALYMEGRRGMMQWYADFIDQL  387
            +IRG YNHALY++GRR MMQWYAD+ID L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

165) ECNA114_4679 in NC_017644


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  367 bits (1378),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 211/394 (54%), Positives = 298/394 (76%), Gaps = 4/394 (1%)

Query  1    MPLTVRQIESAKPADKDYKLSDGQGLYLLVKKSGSRYWNLKYRFAGKEKKLVIGVYPDIS  60
            M+LT RQ+E+A+P +KDYKLSD +GLYLLVK +G+RYW LKYR+AGKEKKL +GVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARQKRDEARKLLAEGKDPSYEKQALKFAIRESMACTFRTIAEELLTHMARRWTAGYQ  120
            LA+AR KRD+ARK+++EG DP+  K+  K++ + S + TF+++A E   H +  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  ADQRARLENHVFPALGNRPVTGIRPMEILNVLRVIEEQGKLEALRKTRQLCAQVFDYAIA  180
                  L++++FP LG+R+VT+I P+E+L++LR IE +G LE LRK RQ C Q+F YAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATVNPASTLSGVLLPPEKQQRRTLSEEQMGAFMHQMTA--SGNLMSLATRMLVLTAV  238
            TGRATVNPAS L++ L +P   +   L  +++  F+++++   ++ +  +AT +L+LT++
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RTGELRLASWDEINFTEALWVIPKERMKMRRPHVVPLSRQVLALLKEIKTRTESRHSAFI  298
            RT ELR A W EI+F +ALW IP  RMKMRR HVVPLSRQV  +L+++KT +   +  ++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSG--QYRLV  298

Query  299  IPGAFRKDRPRGRKCINEFLEQSGWHALTTAHGFRHTFSTILHDHDFSSAWIELQLAHVD  358
            +PG    ++P +   IN  L + G ++ +T+HGFRHT STILH+++F+SAWIE+QLAHVD
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  359  KNVMRGTYNHAQYLDGRREMMQWYADYIDSLSSQ  392
            KN +RGTYNHA Y+DGRREMMQWYADYIDSLS Q
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

166) SSON53_21650 in NC_016822


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  365 bits (1373),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 197/341 (58%), Positives = 269/341 (79%), Gaps = 0/341 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALT  +V TA+PK+K YKL+D  G+YLL++T G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AR KR +ARK+++ GGDPGE K+ EK++Q++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RT ELR A W +IDF+  LW IP   MKM+R H+VPLS QV  +++QL  +S +  LVF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILR  341
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTIL+
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILH  341

167) SEEH1578_01295 in NC_021810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 198/356 (56%), Positives = 271/356 (77%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDV 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS S  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE R + EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++ +    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GR + +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

168) SU5_03538 in NC_017623


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 198/356 (56%), Positives = 271/356 (77%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDV 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS S  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE R + EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++ +    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GR + +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

169) CFSAN002069_16980 in NC_021812


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 198/356 (56%), Positives = 271/356 (77%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDV 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS S  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE R + EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++ +    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GR + +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

170) SeHA_C3266 in NC_011083


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  362 bits (1360),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 198/356 (56%), Positives = 271/356 (77%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LTARQVETA+PKEK YKL+D  GLYLLV+  G RYWRLKYR  GKEK LA+GVYPDV 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LAEAR KR+DA++ ++ G DP+  ++ EKL+++  A N+F+A++ EW Q++   WS S  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
              +L +++KD+FPY+G R++ DI P+E+L +L +IE R + EK+RKVRQ C ++ +YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA  NPA++L+S++ +    H++ L  DELP FLR L  Y GS + ++A +LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR AEW E+DF++ +W +P  RMKMRR H+VPLS Q  D+L+QLK  +G   L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GR + +KPMS+ ++ ++++RIGY GR TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

171) M495_08725 in NC_021741


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  361 bits (1358),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 202/391 (52%), Positives = 290/391 (75%), Gaps = 4/391 (1%)

Query  1    MKLNARQVDTAKPKDKDYKMPDGNGLFLLVKTSGAKYWRFRYTFAGREKMLAIGVYPAVS  60
            M L ARQV+TA+PK+KDYK++D  GL+LLVKT+GA+YWR++Y +AG+EK LA+GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSVARDKRDEARRSVAAGEDPVIVKNRGAATK----ATTFKEIANEWHEFKKPGWSAVYA  116
            L+ AR KRD+AR+ ++ G DP   K +   T+    + TF  +A EWH+ K  +WS  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  117  EDILEAFEKDIYPAVGRLPVSEIEPVQMLTALRVIENRGATEKASKTRRWCGEVFGYAVA  176
              +LEA++KDI+P +G+ +V++I P++ML  LR IE+RG+ EK  K R+ C ++F YA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  177  TGRAKYNPVSELRKAMKGHKGVsfpfleaeelpeflsaVDGYLGSPLPKLGIKIMMLAGM  236
            TGRA  NP SEL  ++ + K+  FP L A+ELP FL  +  Y GSP+ +++ ++++L+G+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  237  RTRELRYSRWDWVDFDNALWEIPAEFMKMGRPHLIPLSKQLITLLKELYALTGRFENMFP  296
            RT ELR + W  +DFDNALW IP   MKM R H++PLS+Q+  +L++L +++G++  +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  297  GRVNPTRVMCENTINKMIHAIGYKGRVVGHGFRHTFSTILNDQGFNPDWVEIQIAHVDKN  356
            GR +  + M E +IN ++  IGY GR  GHGFRHT STIL++QGFN+ W+E+Q+AHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  357  KIRGVYNHALYLEGRREMVQWYSDYVDQLKG  387
             IRG YNHALY++GRREM+QWY+DY+D L  
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

172) YPA_0385 in NC_008150


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  361 bits (1356),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 193/331 (59%), Positives = 272/331 (83%), Gaps = 0/331 (0%)

Query  9    VTVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  68
            ++ AR+KRD+A+KI++ GGDP+++K++EKL+++  ATNTF+A++ EW Q++   WSESY 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  69   LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  128
              ++ +++ D+FPY+G R++ +I PLE++ +L ++EKRG+ EK+RKVRQ C ++ +YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  129  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  188
            TGRA  NPA++L+S++A+ K  H+PHL  +E+P FL  LA Y GS + ++A  LL+LTG 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  189  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  248
            R  ELR AEW+E+DFDNALW IP  RMKMRR H+VPL+ Q   IL+Q++ +SG+Y++VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  249  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  308
            GR + +KP+SE ++N++++RIGY+GRATGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  309  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  339
            SIRGTYNHA Y+DGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

173) ECED1_5046 in NC_011745


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  356 bits (1336),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 216/395 (55%), Positives = 293/395 (75%), Gaps = 4/395 (1%)

Query  1    MPLTVRQIESAKPADKDYKLSDGQGLYLLIKKSGARYWNLKYRFAGKEKKLVIGVYPGIS  60
            M+LT RQ+E+A+P +KDYKLSD +GLYLL+K +GARYW LKYR+AGKEKKL +GVYP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LALARQKRDEARKLLAEGKDPSYEKQASKHALRESIACTFCTLAEELFTHMACRWTAGYL  120
            LA AR KRD+ARK+++EG DP+  K+  K + + S + TF +LA E   H +  W+ +Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  ADQRARFENHINPMLGKRPVADIRPLEILNALRVIEKNGKLEALRKTRQLCSQIFDYAIA  180
                  ++++I P LGKR+V+DI PLE+L+ LR IEK G LE LRK RQ C+QIF YAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRATINPASTLSSVVLHPEKQQRRMLSEEQLGAFMYQMKV--SGNFMSLVTQILVLTAV  238
            TGRAT+NPAS L+S +  P   +   L  ++L  F+ ++    ++    + T++L+LT++
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RTGELRLATWDEIDFTNALWVIPKERMKMRRPHVVPLSHQTQMLLKEIKIITAPRNSELV  298
            RT ELR A W EIDF NALW IP  RMKMRR HVVPLS+Q   +L+++K +++  +  LV
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSG--QYRLV  298

Query  299  IPGVYRDNQPRGRGCINEFLQQVGWHTFTTAHGFRHTFSTILHDHDFSSAWIELQLAHVD  358
            +PG    N+P + + IN  L+++G +  +T+HGFRHT STILH+++F+SAWIE+QLAHVD
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  359  KNIMRGTYNHAQYLDGRREMMQWYADYIDSLSEQA  393
            KN +RGTYNHA Y+DGRREMMQWYADYIDSLSEQ 
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

174) CDCO157_0285 in NC_017906


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  344 bits (1293),  Expect = 3e-96, Method: Compositional matrix adjust.
 Identities = 184/294 (63%), Positives = 243/294 (83%), Gaps = 0/294 (0%)

Query  37   QTESENAFEKIAREWHQLKSAKWSAGYASDIMEAFKNDIFPYVGTRPVGEIKPLELLNVL  96
            +  + N+F+ +A EWHQ KS  WS +YA  ++EA+ +DIFPY+G R+V +I PLE+L++L
Sbjct  93   KISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEIL  152

Query  97   RKIEKRGALEKMRKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVHQSNHFPFLKADEI  156
            R+IEKRG+LEK+RKVRQ C+++FRYAIATGRA  NPA++L+S+L   ++ HFP L+ADE+
Sbjct  153  RRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLRADEL  212

Query  157  PDFLRALEGYSGSKLVQIATKLLMITGVRTIELRAALWQEFDLDNAIWEIPAERMKMRRP  216
            P FLR L  Y GS + ++AT+LL++TG+RTIELR+A W E+D+DNA+W IP  RMKMRR 
Sbjct  213  PVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRK  272

Query  217  HLVPLSSQAVDLLNELKIMTGNYRYVFPGRNDPNRPMSEASINQAIKRIGYGGKVTGHGF  276
            H+VPLS Q  D+L++LK  +G+YR VFPGR D N+PMSEASIN  +KRIGY+G+ TGHGF
Sbjct  273  HVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGF  332

Query  277  RHTLSTILHEQGFESAWIEIQLAHVDKNSIRGTYNHAQYFSGRKSMMDWYSNLI  330
            RHT+STILHEQGF+SAWIE+QLAHVDKNSIRGTYNHA Y+ GR+ MM+WY++ I
Sbjct  333  RHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYI  386

175) GEM_3075 in NC_018513


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  326 bits (1222),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 188/389 (49%), Positives = 274/389 (71%), Gaps = 3/389 (0%)

Query  1    MSLTDTAVRNLKPSDKPYKLADGGGMYLHVTPNGGKYWRLAFRLHGKQKIYALGVYPQVS  60
            M+LT   V   +P +K YKL+D  G+YL V   G++YWRL +R+ GK+K  ALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARQMRDEAKKLIKQGIDPVIERKQTVRRRSEEQATTFELIAREWHKTKRSAWTESHA  120
            LAEAR  RD+A+K+I +G DP   +++    +    + TF+ +A EWH+ K  +W+ES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KKIMNSLEADIFPRLGDRPIGSISAPDLLMALRVIEKRGALEIAGRVLQRCNAVFRYAVA  180
            + ++++L+ DIFP LG R++  I + ++L  LR IEKRG+LE   +V Q CN +FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRIVANPAAELRGALKTPERKHHAALAHDELPEFLAKLAGYDGDPQTRLGLQLMVHTFV  240
            TGR   NPA+EL ++L +P   H + L  DELP FL KLA Y+G P TR++ +L++ T +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTGELRAASWAEFNLELSEWRIPAERMKMREEHIVPLSKQAVALLRQLQAVGAGSDLVFP  300
            RT ELR+A W+E++++ + W IP  RMKMR  H+VPLS+Q   +L+QL++ ++   LVFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SGNGRRNKWISENTLLYALYRLGYHSRATGHGFRATASTILNEMGFHPDWIERQLAHAER  360
             G    NK +SE ++   L R+GY++RATGHGFR T STIL+E GF++ WIE QLAH ++
Sbjct  301  -GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  361  NKVRAAYNRALYLAERRQMMQVW-SDYLD  388
            N +R++YN+ALY+  RR+MMQ W +DY+D
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYID  387

176) MYA_1732 in NC_017920


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  323 bits (1213),  Expect = 7e-90, Method: Compositional matrix adjust.
 Identities = 171/386 (45%), Positives = 276/386 (72%), Gaps = 1/386 (0%)

Query  1    MPLTDVAVRAAKPREKSYKLADGQGMYLEIMPNGSKYWRLKYRIDGKEKRMALRVYPAVT  60
            M+LT   V +A+P+EK YKL+D +G+YL +   G++YWRLKYRI GKEK++AL VYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LLAARKARDEIKDQLRAGLDPSHEKKRVKAQRSLDRENSFEPIAREWHQQKKGAWSERHA  120
            L  AR  RD+ +  +  G DP++ K++ K  + +   N+F+++A EWHQ+K  +WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DRIMKLLERELFPAIGARPIAEIMAPELLAVIRKIEARDAIELAHKTIQATSQIFRYAIA  180
              ++  L++++FP +G R++++I++ E+L ++R+IE R+++E  +K  Q  +QIFRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDSAPDLRGALKPRFVVHMRRVSEAELPELMRQISAYDGDFQTRLALQFMALTFV  240
            TGRA  ++A++L ++L +    H  ++   ELP ++R+++ Y+G   TR+A +++ LT +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTSELRFAEWTEID-EKKEWRIPPEKMKMRTPHIVPLSTQALEVIAKLPELNGHSQFLFP  299
            RT ELR AEW+EID ++  W IP  +MKMR  H+VPLS Q  +++ +L  ++G+ +++FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  300  SRSSSKKPMSENTILYALYRMGYHSRMTGHGFRGLASTILNEHSFNRDWIERQLAHSERD  359
            +R   +KPMSE +I   L R+GY++R TGHGFR   STIL+E++FN  WIE QLAH +++
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  GVRAAYNHAEYLPERRKMMQWWSNYL  385
            ++R++YNHA Y+  RR MMQW ++Y+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYI  386

177) XBJ1_1315 in NC_013892


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  322 bits (1206),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 177/294 (61%), Positives = 234/294 (80%), Gaps = 0/294 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLADGGGLYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDIS  60
            M LTARQV+TA+PKEK YKL+D  GLYLLV+  GARYWRLKYRIAGKEK LALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARTKRNEARRTLSDGNDPIeekkaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYA  120
            L++AR KR++AR+ +S+G DP E K+ EK ++ ++ +N+F+++A EWH+HK  +WS +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EDILEYLKKDIFPYIGKRAVTEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
              +LE L KDIFPY+GKR+VT+I P EML +LR++E+RG L+KL+K RQ C QIF YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAEFNPVTDLASALKAPKQKHFSHLLADQMNAFLVALAGYSGSEVTQSATRLLMLTGV  240
            TGRA  NP ++L+S+L APK  HF+HL AD++  FL  LA Y GS VT+ AT LL+LTG+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTIELRESEWTEFDFDKDIWQIPAERMKMRRPHIVPLSNQVKAILIKLHSITGR  294
            RTIELR +EW+E+DFD+ +W IP  RMKMRR H+VPLS QV  IL +L +++G+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQ  294

178) intC in NC_013508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 181/387 (47%), Positives = 272/387 (71%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKDKPYRLLDSNGLYLYIPASGKKVWQLRFKLGGKEKILTVGKYPLVSLQ  61
            LT +Q+E+A+PK+K Y+L D  GLYL + ++G + W+L+++++GKEK L++G YP VSL 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAYQARKDIADGIDPVRTKKES------EKDNSFSVIYKEWYAHKRQVWSEGYANE  115
            EAR K  +ARK I++G DP   K+           N+F  +  EW  HK   WSE+YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LQRMFETDILPLIGAMEMDEIEPMALLSVVRRIEERGAMERANKARRRCGEVFRYAIVTG  175
            +   ++ DI+P +G   + +I P+ +L ++RRIE RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPAEQIPAFNQALAGYSGSIVSKIATMVLQYTALRT  235
            RA  NPA++L+ ++ + +  +FP L A+++P F + LA Y GS V+++AT +L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMKWPNVDFTSGLITIDESEMKSRKPHIVPMSHQVAELLKALKPVTEPVSQFVFAG  295
             ELRS  W+++DF ++L TI ES MK R+ H+VP+S+QV+++L+ LK  +    ++VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY-RLVFPG  301

Query  296  RNDKNKSISENAVLLVIRQIGYEGLASGHGFRHQFSTILHEHEWPSEAIERQLAHTDKQS  355
            R D NK++SE ++ +V+++IGY+G A+GHGFRH  STILHE+   S  IE QLAH DK+S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDG  382
            +RG YNHA Y+D RREMMQW AD ID+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

179) MYA_0364 in NC_017920


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  309 bits (1160),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 173/369 (47%), Positives = 264/369 (72%), Gaps = 0/369 (0%)

Query  23   KLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEG  82
            KL D  GLYL ++++G++ WRLKYR+ GKE+ L++G YP  SLA+AR +RD+A+++++EG
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEG  78

Query  83   KNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATWSGSHANRVKKQLDREVFPLIGQR  142
             +P+  +  EK T+ I+A NTF+A+A EW + +  +WS S A  V   LD+++FP +G+R
Sbjct  79   GDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKR  138

Query  143  PISSIGAPDLLAVIRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKA  202
            +++ I + ++L ++RRIE R ++E  RK  Q C Q+FRYA+AT+RA  +P+++L ++L A
Sbjct  139  SVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAA  198

Query  203  VPVKHMARVGESELPELLRSIAAYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERR  262
                H +++   ELP +LR +A Y+G P TR+A  +L LT +RTIELR AEW+EID++  
Sbjct  199  PKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNA  258

Query  263  EWRIPAEKMKMRRVHIVPLAEQTIALLAELRALTGHRRWLFPNSRRPLQQMSENTILYAL  322
             W IP  +MKMRR H+VPL+ Q   +L +L++++G+ R +FP      + MSE +I   L
Sbjct  259  LWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVL  318

Query  323  YRMGYRSRMTGHGFRGLASTILNEKGFNSDWIERQLAHSEQDGVRAAYNHAEYLSERHRM  382
             R+GY +R TGHGFR   STIL+E+GFNS WIE QLAH +++++R++YNHA Y+  R+ M
Sbjct  319  KRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREM  378

Query  383  MQWWADYLD  391
            MQW ADY+D
Sbjct  379  MQWYADYID  387

180) Bcep1808_0425 in NC_009256


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  309 bits (1160),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 173/369 (47%), Positives = 264/369 (72%), Gaps = 0/369 (0%)

Query  23   KLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEG  82
            KL D  GLYL ++++G++ WRLKYR+ GKE+ L++G YP  SLA+AR +RD+A+++++EG
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEG  78

Query  83   KNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHANRVKKQLDREVFPLIGQR  142
             +P+  +  EK T+ I+A NTF+A+A EW + +  +WS S A  V   LD+++FP +G+R
Sbjct  79   GDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKR  138

Query  143  PISSIGAPDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKA  202
            +++ I + ++L ++RRIE R ++E  RK  Q C Q+FRYA+AT+RA  +P+++L ++L A
Sbjct  139  SVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAA  198

Query  203  VPVKHMARVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERR  262
                H +++   ELP +LR +A Y+G P TR+A  +L LT +RTIELR AEW+EID++  
Sbjct  199  PKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNA  258

Query  263  EWRIPAEKMKMRRVHIVPLAEQAIALLSELRALTGHRRWLFPNSRRPLQQMSENTILYAL  322
             W IP  +MKMRR H+VPL+ Q   +L +L++++G+ R +FP      + MSE +I   L
Sbjct  259  LWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVL  318

Query  323  YRMGYRSRMTGHGFRGLASTILNEKGFNSDWIERQLAHSEQDGVRAAYNHAEYLSERHRM  382
             R+GY +R TGHGFR   STIL+E+GFNS WIE QLAH +++++R++YNHA Y+  R+ M
Sbjct  319  KRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREM  378

Query  383  MQWWADYLD  391
            MQW ADY+D
Sbjct  379  MQWYADYID  387

181) GM21_1254 in NC_012918


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  308 bits (1155),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 172/392 (44%), Positives = 272/392 (70%), Gaps = 3/392 (0%)

Query  1    MPLTDVKVRTAKPGEKQVKLSDGDGMYLLVTPNGGKCWRLKYRFGGKEKVLALGTYPEIS  60
            M+LT  +V TA+P EK+ KLSD  G+YLLV   G++ WRLKYR++GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARQRRHEARKLLANGVDPNEIKKAQKAATITETENSFEVVAREWHQKFSPSWSGVHS  120
            L +AR +R++ARK++++G DP E K+ +K +    + N+F+ +A EWHQ  S SWS   +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DTTLRRLQADVFPAIGARPISEIKAPDALAMLRRIESRGALETAHRIRTICGQVFRYAVA  180
             + L  L+ D+FP +G R++++I + + L +LRRIE RG+LE  +++R  C Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDCTADLKGALPPCKKSHLAAITDPKAVAPLLRAIDGYQGTIPVKSALQLAAMFF  240
            TGRA  + +++L ++L++ K +H++ +  +  ++ +LR +  Y+G+   + A +L  +  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRPGELRQAEWSEIDFENALWNIPASRMKMKEPHIVPLASHAIAILKELQALTGRSRFLF  300
            +R  ELR AEWSEIDF+NALW IP SRMKM+  H+VPL+ +   IL++L++++G+ R++F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  301  PSGRSFTRPMSNNAINAALRRMGFDKDEMTGHGFRAMARTILDEVLQFRPDFIEHQLAHA  360
            P+   + +PMS+ +IN  L+R+G+D +  TGHGFR    TIL+E   F +  IE QLAH 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  361  VKDPNGRAYNRTAHLAERRKMMQTWAEYLDDL  392
             K++   +YN++  +  RR MMQ  A+Y+D L
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

182) RSc0968 in NC_003295


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  307 bits (1149),  Expect = 8e-85, Method: Compositional matrix adjust.
 Identities = 179/392 (46%), Positives = 280/392 (72%), Gaps = 1/392 (0%)

Query  1    MPLTDLSARNAKPQDKPYRLADGLGMYLEVMPNGSKYWRLKYRIAGKEKRLALGVYPSVG  60
            M+LT      A+P++K Y+L+D  G+YL V   G++YWRLKYRIAGKEK+LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laqartarddarrliaaGTDPSQARKEAKLATTTARTHTFEVVAREWHEKQSATWVPTYA  120
            LA+AR  RDDAR++I+ G DP++ ++  KL+   + T+TF+ +A EWH+ +S +W  +YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  TKVLHSLETDIFPDLGARPITEITAPQMLATLRKVESRDALETVARLQQRCSAVFRYAVV  180
              VL++L+ DIFP LG R++T+I + +ML  LR++E R++LE + +++Q C+ +FRYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAAHNPCTDLKGAFKTAKVQHMARVQANEVPTLIKNIRGYDGDLITRIALQFMALTFV  240
            TGRA+ NP ++L +++ ++K  H ++++A+E+P +++++  Y+G  +TR+A +++ LT +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTKELIGAQWSEIDFETEEWRIPAERMKMREPHFVPLSWQAIALLRAAEKMTGNRQYVFQ  300
            RT EL +A+WSEIDF+   W IP  RMKMR  H VPLS+Q   +L+     +G+ + VF 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  SP-KGRTHISNNTILYALYRLGYHSRMTGHGFRGLASTMLHEQGFNPDVIERQLAHAERN  359
            +       +S+ +I   L R+GY++R TGHGFR   ST+LHEQGFN+  IE QLAH ++N
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  KVRAAYNHAQYLPERRRMMQHWADHLDQLAQD  391
             +R++YNHA Y+  RR MMQ  AD +D L+++
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

183) vinT in NC_021232


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  304 bits (1138),  Expect = 6e-84, Method: Compositional matrix adjust.
 Identities = 183/387 (48%), Positives = 272/387 (71%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKDKPYRMLDGNGLYLYVPASGKKVWQLRYKLDGKEKVLTLGKYPLMSLQ  61
            LT +Q+E+A+PK+K Y++ D  GLYL V ++G + W+L+Y++ GKEK L+LG YP +SL 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDVSVGVDPVKAK---KLSVK---DNSFSAIYHEWYDHKRQVWSEGYADE  115
            EAR K   ARK +S G DP   K   KL+ K    N+F A+  EW +HK   WSE+YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LSRMFRDDILPMIGYLEIQDIEPMQILEVIRRFEERGAMERANKARRRCGEVFRYAIVTG  175
            +   +  DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNYPFLPADQIPAFNNALSGFSGSIISKIATQVLQYTALRT  235
            RA  NPA++L+ ++ + +  ++P L AD++P F   L+ + GS ++++AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWENVDFENRMITIDEEVMKGRRVHVVPMSDQVINLLNTLKPITSPVSSFVFAG  295
             ELRS +W ++DF+N + TI E  MK RR HVVP+S QV ++L+ LK +++    +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY-RLVFPG  301

Query  296  RNDKKKPISENAVLLVIRQIGYEGLASGHGFRHQFSTIMNEHGWPADAIEKQLAHTASGS  355
            R D +KP+SE ++ +V+++IGY+G A+GHGFRH  STI++E+G  +  IE QLAH    S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  IRGIYNHAQYLDKRREMMQWWADYIDG  382
            IRG YNHA Y+D RREMMQW ADYID+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

184) PSPTO_5344 in NC_004578


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  303 bits (1134),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 181/393 (47%), Positives = 271/393 (69%), Gaps = 4/393 (1%)

Query  1    MPLSDTTIRTAKPKDKLYRLTDANGLCLEIAPSGSKLWRYRYRFNGKAKMLALGAYPAVT  60
            M+L+   + TA+PK+K Y+L+D  GL L +  +G++ WR +YR+ GK K LALG YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LLKARQLRDSARQLLVEGNDPGEHKKTAQQAQKVEGL-TFETLAREWFAYNSPRWAESTT  119
            L  AR  RD AR+++ EG DPGE K+  + +QK+ +  TF++LA EW   +S  W+ES +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  YKAKLYMENDLIPGIGARPVKALTRPDLVDLVRKVEARGTLNAAGKIRQWLHQIFRYGLA  179
                  +++D++P +G R+V  +   ++++++R++E RG+L+   K+RQ  +QIFRY++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGVVESNPATDLDVVAAPQKAPRHHPHVPFSELPELLEICDGSKINTLTRCAIHLLVLTA  239
             G    NPA++L    A+ KA+ H PH+   ELP +L        + +TR A +LL+LT+
Sbjct  181  TGRATVNPASELTSTLAAPKAA-HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRNAPWSEFDLDAATWAIPKERMKARRPHVVPLPTQAVDILRQLQPITGRYPLVF  299
            +R  ELR+A WSE+D+D A W+IP  RMK RR HVVPL+ Q  DIL+QL+ ++G+Y LVF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  AGQHNPSRPMSENTINKALRLLGYENRQTGHGFRHLLSTELNGRGYNKDWIERQLAHGDA  359
            +G+ + ++PMSE +IN  L+ +GY+ R TGHGFRH +ST L+ +G+N  WIE QLAH D 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DGIRDTYNHASYLEQRRGMMQAW-ADSIDALSA  391
            ++IR+TYNHA Y++ RR MMQ W AD ID+LS 
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSE  391

185) HYPMC_0824 in NC_015717


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  302 bits (1130),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 171/395 (44%), Positives = 271/395 (69%), Gaps = 7/395 (1%)

Query  1    MPLTDAAIRAAKPGPSPFKISDGGGLHLLVQTGGTKLWRLAYRFAGKQKTLAMGVYPTIA  60
            M+LT   + +A+P    +K+SD  GL LLV+T G++ WRL YR+AGK+K LA+GVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAKAREGREKAKRLLADGIDPAAQKRRDKIAAKVSADATFRSIALEYIADRRHALTPLYA  120
            LA AR  R+ A++++++G DP+ +KR++K++ K+SA  TF+++A E   ++  + +  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DQILRRLEADIFPALGNRPIADIDAPELLETLRKVEKRGALEQAKRLRQTCGQIFRYAVV  180
              +L  L+ DIFP LG+R+++DI + E+LE LR++EKRG+LE+ +++RQ C QIFRYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TSRAKHDPSAALKGALKPKGRQRHHKPMPRHDLPGFLRTIDDYYGEPRTGLALRLIVLTM  240
            T+RA  +P++ L ++L +  +  H   +  ++LP FLR + +Y G P T +A  L++LT 
Sbjct  181  TGRATVNPASELTSTL-AAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRTTELRAGRWEEFENLDGDEPLWRIPAERMKARFEHLVPLSRQAVAALNELRAMPGAKA  300
            +RT ELR++ W E   +D D++LW IP  RMK R  H+VPLSRQ    L++L++ +G   
Sbjct  240  LRTIELRSAEWSE---IDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  301  EGFLFPSPSK-QGCMSNNCMLYALYRLGYHGRATIHGFRGVASTLLNEAGFDDDWIEKQL  359
              ++FP+    +  MS+  +   L R+GY+GRAT HGFR   ST+L+E GF+  WIE QL
Sbjct  297  --LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  360  AHDERDETRAAYNAAEYLAGRRSMLQWWADWLEQI  394
            AH +++  R++YN A Y+ GRR M+QW AD ++ +
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

186) intB in NC_005085


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  301 bits (1126),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 170/389 (44%), Positives = 268/389 (69%), Gaps = 2/389 (0%)

Query  1    MPLTDTAIRNAKPREDGKPAKLADGGSLFLWVMPNGAKYWRMAYRFDGKQKTLAFGVYPT  60
            M+LT   +  A+P+E  K  KL+D  +L+L V   GA+YWR+ YR+ GK+K LA+GVYP 
Sbjct  1    MALTARQVETARPKE--KDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPD  58

Query  61   TSLKDAREKREAARKLLAAGTDPNAAKKEQKRERQLTVENSFEIVAREWYDKQLPRWTDD  120
             SL +AR KR+ ARK+++ G DP   K+ +K  ++++  N+F+ +A EW + +   W++ 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  121  HAVRILDSLKADAFPDLGKLPVSQLTAPVILDTIRKIEKRGAVETAQRVLQRISAVIRYA  180
             A  +L++L  D FP LGK +V+++ +  +L+ +R+IEKRG++E  ++V Q  + ++RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  181  IQTGRAVHNPATDLTGAIRAKKVEHRPALPRGELREFYRRLAAEPLYIPTRIAMHLLMLT  240
            I TGRA  NPA++LT+++ A K  H P L  +EL  F R+LA       TR+A +LL+LT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FVRPGELRAARWEEFDEERAEWRIPAERMKMREPHLVPLSRQALELLKELRPLTGKSALL  300
             +R  ELR+A W E+D + A W IP  RMKMR  H+VPLSRQ  ++L++L+ ++G+  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPAVTDLKKPMSENTLGYAMGRMGYKGTATPHGFRALASTVLNEEGFDPDIIEKQLAHAE  360
            FP+  D++KPMSE ++   + R+GY G AT HGFR   ST+L+E+GF++  IE QLAH +
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RNKVRAAYHRAEYLEERRKMMQWWAEFLG  389
            +N +R++Y++A Y++ RR MMQW A++++
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYID  387

187) Xaut_3444 in NC_009720


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  298 bits (1116),  Expect = 3e-82, Method: Compositional matrix adjust.
 Identities = 176/394 (45%), Positives = 272/394 (70%), Gaps = 7/394 (1%)

Query  1    MPLTDTAARSAKGREKPYKLADGGGLYLLVNPDGARYWRLNYRFAGKQKTLALGTYPITS  60
            M+LT     +A+ +EK YKL+D  GLYLLV+  GARYWRL+YR+AGK+K LALG YP  S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKGRETAKEQLAARIDPSearraekraarLHSSRIFEVVAQEWFAAKLPGWVPSYS  120
            LA+AR  R+ A+  ++   DP+E +R EK + ++ ++  F+ +A EW   K  +W  SY+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DRLLSRLEADIYPTLGHRPIADIEPPEVLEVIRKVETRGAIELAKREMQVIGQIFHFAIA  180
              +L  L+ DI+P LG R+++DI P E+LE++R++E RG++E  ++  Q   QIF++AIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  SGRAKRDPTQDLRGALKSPGRQKHHRALPREDLPDFLKALDAYDGEPMTKLALKLMVLTF  240
            +GRA  +P+ +L ++L +P +  H   L  ++LP FL+ L  Y+G P+T++A +L++LT 
Sbjct  181  TGRATVNPASELTSTLAAP-KAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRTTELRAARWSEFEGLDGPEPLWRIPPERMKMRFEHLVPLSPQAVAVLQELRPLAGRSP  300
            +RT ELR+A WSE   +D  ++LW IP  RMKMR  H+VPLS Q   +LQ+L+ ++G+  
Sbjct  240  LRTIELRSAEWSE---IDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  301  QLFPSPSK-EGFMSNNTMLFAMYRMGYHGRATVHGFRGVASTWLNEAGYHPDWIERQLAH  359
             +FP+    +  MS+ ++   + R+GY+GRAT HGFR   ST L+E G+++ WIE QLAH
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  360  DERNEVRGAYNSAQYLTGRRQMMCDW-ANFLDGL  392
             ++N +RG+YN A Y+ GRR+MM +W A+++D+L
Sbjct  357  VDKNSIRGTYNHALYIDGRREMM-QWYADYIDSL  389

188) AvCA6_40500 in NC_021150


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 181/396 (46%), Positives = 265/396 (67%), Gaps = 4/396 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+   + TA+P+EK Y+L+D  GL L V  TG++ WR +YR+ G+ K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQ-SDGLTFETLAREWHAYRAPRWAKSTA  119
            L  AR  RD AR++++EG DP+  ++ E+ +Q+ S   TF++LA EWH  ++  W+ S A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
                  L+ D++P LGKR+V  I   E++E+L+ IE RG+ +  +K RQ  +QIFR+++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G    NPA++L    A + A++     +  ELP +L K+     + +TR A  LL+LTG
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            +R  ELR+A WSE+D+  A+WTIP  RMK RR H+VPL+RQ   IL++L+ ++G Y LVF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
            +GR +  +PMSE ++N  L   GY GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCAGAN  394
            + +R+TYNHA Y++ RR+MMQ W AD ID+L    +
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

189) AvCA_40500 in NC_021149


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 181/396 (46%), Positives = 265/396 (67%), Gaps = 4/396 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+   + TA+P+EK Y+L+D  GL L V  TG++ WR +YR+ G+ K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQ-SDGLTFETLAREWHAYRAPRWAKSTA  119
            L  AR  RD AR++++EG DP+  ++ E+ +Q+ S   TF++LA EWH  ++  W+ S A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
                  L+ D++P LGKR+V  I   E++E+L+ IE RG+ +  +K RQ  +QIFR+++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G    NPA++L    A + A++     +  ELP +L K+     + +TR A  LL+LTG
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            +R  ELR+A WSE+D+  A+WTIP  RMK RR H+VPL+RQ   IL++L+ ++G Y LVF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
            +GR +  +PMSE ++N  L   GY GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCAGAN  394
            + +R+TYNHA Y++ RR+MMQ W AD ID+L    +
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

190) Avin_40500 in NC_012560


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 181/396 (46%), Positives = 265/396 (67%), Gaps = 4/396 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+   + TA+P+EK Y+L+D  GL L V  TG++ WR +YR+ G+ K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQ-SDGLTFETLAREWHAYRAPRWAKSTA  119
            L  AR  RD AR++++EG DP+  ++ E+ +Q+ S   TF++LA EWH  ++  W+ S A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
                  L+ D++P LGKR+V  I   E++E+L+ IE RG+ +  +K RQ  +QIFR+++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G    NPA++L    A + A++     +  ELP +L K+     + +TR A  LL+LTG
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            +R  ELR+A WSE+D+  A+WTIP  RMK RR H+VPL+RQ   IL++L+ ++G Y LVF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
            +GR +  +PMSE ++N  L   GY GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCAGAN  394
            + +R+TYNHA Y++ RR+MMQ W AD ID+L    +
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

191) Q7A_2891 in NC_017857


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  297 bits (1113),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 169/394 (43%), Positives = 272/394 (70%), Gaps = 4/394 (1%)

Query  2    LTDVKIKALKPKDKLYAVSDEKGLYIEVSTTGGKWWRFKFRFDGKQKRLSVGTYPDVGLK  61
            LT  ++ + +PK+K Y +SDE+GLY+ V TTG++ WR+K+R+ GK+K+L++G YPDV+L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   QAREQRDELRKQIANGVDPSDIRKAEK--QLNAGQLSFEFVAREWHQKFRHRWSEKYALN  119
            +AR +RD+ RK I++G DP++ ++ EK  Q  ++  +F+ +A EWHQ     WSE YA +
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  120  TISRLEREVFPFIGSKNINDIKAPELLAVLRRMESRGILETAHRVHQKCGQIFRYAVATG  179
             +  L++++FP++G +++ DI + E+L +LRR+E RG LE  ++V+Q C QIFRYA+ATG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  180  RAERDPSTDLKGALPPVKVKHHASIIEPKQIGGLLRAINGYSGSFVTLCALRLAPLVFVR  239
            RA  +P+++L ++L++ K  H +  + + ++  +LR +  Y GS VT  A  L  L  +R
Sbjct  183  RATVNPASELTSTLAAPKAAHFPH-LRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  240  PGELRHAEWTEFDLEKAEWRIPAEKMKMASVHIVPLSKQAIAVIETLKPLTGSGKYLFPS  299
              ELR AEW+E+D+++A W IP  +MKM   H+VPLS+Q   +++ LK ++G  + +FP+
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  300  IRTITRPMSENTVNGALRRLGYTGDEMVGHGFRSMASTILNEQGWNRDAIERQLAHSERD  359
               I +PMSE ++N  L+R+GY G    GHGFR   STIL+EQG N   IE QLAH +++
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  GVRAAYNYAEYLSERKRMMQSWANYLDGLTAGAA  393
            ++R++YN A Y+  R+ MMQ  A+Y+D+L+   +
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

192) Rfer_1354 in NC_007908


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  297 bits (1112),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 179/390 (46%), Positives = 270/390 (70%), Gaps = 2/390 (0%)

Query  1    MSLTDTAIKKAKPGDKPVKLSDGKGLYLLVNPVGSKLWRWKYRFLGKEKVMSLGAYPDVS  60
            M+LT   +  A+P +K  KLSD +GLYLLV+  G++ WR KYR+ GKEK ++LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARDGMGAARKLLASGTDPMAQRATDKITKQASAENSFQSVALLWWDHWHGAKSARHA  120
            LA+AR   + ARK+++ G DP  ++  +K+T++ SA N+F+++A  W +H   + S   A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DDVMRRLKADVFPAIGARPVSEIQAHELVGMVQTISKRGALDIAKRALQTSGQVFRYAVA  180
              V+  L  D+FP +G R+V++I + E++ +++ I KRG+L+  ++  Q   Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  HGLAQRNPASDIKPSDVLASRKAANYARISAKELPELLRHIEGYAGAAVTRLAMKLMALT  240
             G A  NPAS++ ++  LA+ KAA+++++ A ELP +LR +  Y G++VTR+A +L+ LT
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FVRTSELIGARWAEFDLEARRWDIPASRMKMKTPHIVPLSTQAVNVLQTLQLVSGRGTLL  300
             +RT EL +A W+E+D++   W IP SRMKM+  H+VPLS Q  ++LQ L+  SG+  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGERDHEKSMSNNTILGALDRMGYKGRMTGHGFRGVASTLLHEMGFDHAHIELQLAHQE  360
            FPG  D +K+MS+ +I   L R+GY GR TGHGFR   ST+LHE GF+ A IE+QLAH +
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RNEVSAAYNHATYLKQRTKMMQHWADYLDS  390
            +N + ++YNHA Y+  R  MMQ  ADY+DS
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDS  388

193) D782_3965 in NC_020063


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  297 bits (1112),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 271/407 (67%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPMDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFDGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR+ GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARTRREEARKLVANGIDPGDKKKNDKVEQ--EDARTFEQLAIEWHATNK-KWSEEHS  117
            LA+AR +R++ARK++++G DPG+KK+++K+ Q    + TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNITELKTRDLLAPIKVVELSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR++T++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIGSYTGRPLTRLAVELTLLVFI  237
            +G    NPA E+ +++A+++  H P L     P +L++++ Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALEILEQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ  +IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQVEVCGHGFRTMACSSLIESGL-  356
            KTFSG+  L+F G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERLMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +E  ++H+++NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

194) BURPS1710b_1290 in NC_007434


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  296 bits (1108),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 175/396 (45%), Positives = 265/396 (67%), Gaps = 12/396 (3%)

Query  1    MPLTDVQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  60
            M+LT  QV  A++    YKL+D  G++LLV+  GA+YWRL YR+ GK+K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARKKRDEAREQLAAGIDPGEAKKEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYA  120
            LA AR KRD+AR  ++ G DPGE K+  + T  I+A+N+F+A+A EW + +  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVLNSLEVDVFPKIGPRPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIV  180
              VL++L+ D+FP +G R++++I + +ML I+R +E RG  E  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR + NPA+++ +      +P   H ++++A E+P ++R +  Y+G  VTR+A  L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T +RT E+  AEWSE+D   A W +P  RMKMR  H+VPLSRQ  D+L QL++++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYALYRIGYKSRMTGHGFRGLAATALRELGFGRDVVERQM  356
            VF    GR +I    S+ ++   L RIGY +R TGHGFR   +T L+E GF    +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERRRMMQAW-GDHLDRL  391
            AH ++N + ++Y HA Y+  RR MMQ W +D +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

195) GBP346_A1152 in NC_012695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  295 bits (1104),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 176/396 (45%), Positives = 266/396 (68%), Gaps = 12/396 (3%)

Query  21   MPLTDVQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  80
            M+LT  QV  A++    YKL+D  G++LLV+  GA+YWRL YR+ GK+K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  81   LATARKKRDEAREQLAAGIDPGEAKKEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYA  140
            LA AR KRD+AR  ++ G DPGE K+  + T  I+A+N+F+A+A EW + +  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  141  EKVLNSLEVDVFPKIGPRPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIV  200
              VL++L+ D+FP +G R++++I + +ML I+R +E RG  E  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  201  TGRCSRNPAADIDAQTALKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  260
            TGR + NPA+++ +  A   +P   H ++++A E+P ++R +  Y+G  VTR+A  L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  261  TCVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  320
            T +RT E+  AEWSE+D   A W +P  RMKMR  H+VPLSRQ  D+L QL++++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  321  VFYSVQGRSHI----SNNTMLYALYRIGYKSRMTGHGFRGLAATALRELGFGRDVVERQM  376
            VF    GR +I    S+ ++   L RIGY +R TGHGFR   +T L+E GF    +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  377  AHAERNQVTAAYVHAEYLPERRRMMQAW-GDHLDRL  411
            AH ++N + ++Y HA Y+  RR MMQ W +D +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

196) intB in NC_009485


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  294 bits (1103),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 181/395 (46%), Positives = 262/395 (67%), Gaps = 6/395 (1%)

Query  1    MPLTDTKCRNAKGQIKSRKLSDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVG  60
            M+LT  +   A+ + K  KLSD  GL LL+   GA+YWRL YR  GK++ LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LIEARASRDDAKRSIAADIDPSIVKRERKRAAKIATGNTFEAVAREWHENWKDARSPYYA  120
            L EAR  RDDA++ I+ + DP+  KR  K + KI++ NTF+A+A EWH++   ++S  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  AQILRRLEADAFPAIGRRSIAALEPPELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIV  180
              +L  L+ D FP +G+RS++ + P E+L++LR++EKRG  E  R+++Q   QIFR+AI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAKRDPSVDLKDALRATGEPQRHRAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTF  240
            TGRA  +P+ +L  +L A+  + +   +   ELP FL+KL  Y G   T++A +L+ LT 
Sbjct  181  TGRATVNPASELTSTL-AAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  LRTTELRAGKWNELENLDENSALWRIPAERMKMRLEHLVPLSRQAVAALRELRTLSGGSP  300
            LRT ELR++ W+E++    ++ALW IP  RMKMR  H+VPLSRQ    L++L+T+SG   
Sbjct  240  LRTIELRSAEWSEIDF---DNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  301  NIFPSP-GKGDCMSSNTMLYALYRMGYHGRATTHGFRAVASTILNETNLFNRDWIERQLS  359
             +FP+  +    MS  ++   L R+GY+GRAT HGFR   STIL+E   FN  WIE QL+
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  360  HVERNEVRRAYNAAEWMPDRRRMMQWWADHITALA  394
            HV++N +R +YN A  + +RR MMQW AD I +L+
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLS  390

197) intB in NC_009348


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  294 bits (1100),  Expect = 6e-81, Method: Compositional matrix adjust.
 Identities = 182/388 (47%), Positives = 275/388 (71%), Gaps = 4/388 (1%)

Query  5    DITARQAKWSGKPNGD--KLADEKGLFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVS  61
             +TARQ   +++P+    KL+DE+GL+LLV+ +G +YW+LKYR +GKEKKLALGVYP+VS
Sbjct  2    ALTARQVE-TARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  62   LrearakrdearrVIAEGIDPGLVRKQSKVASRLVSENSLEVLAREWHQSQFALWSPGHA  121
            L EAR KRD+AR++I+EG DPG  +++ K++ ++ + N+++ LA EWHQ +   WS + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  122  TRVIESLEVDVFPDLGLVPITELTAPMILEALRKVEKRGATETAGRILQRVSAIMRYAIQ  181
              V+E+L+ D+FP LG  ++T++ +  +LE LR++EKRG+ E   ++ Q  + I RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  182  TGRASYNPAQDLRGALKATKQEHRPALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMT  241
            TGRA+ NPA +L ++L A K  H P L   ELP F+R+L     +P TR+A +LL+LT  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  242  RPGEVRFARWDEFDMERAEWRIPAARMKMRTEHLVPLSRQALAVLDELHQLTGHCELLFP  301
            R  E+R A W E+D + A W IP +RMKMR  H+VPLSRQ   +L++L  ++G+  L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  302  SERKLTNPMSENTLSYAMGRMGYKGIATPHGFRALASTTLNEEGFDPDVIERQLAHAERN  361
            +   + +PMSE +++  + R+GY G AT HGFR   ST L+E+GF++  IE QLAH ++N
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  362  KVRAAYHRAEYLDDRRKLLQWLADFYDS  389
             +R++Y++A Y+D+RR ++QW AD+ DS
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

198) int in NC_021237


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  294 bits (1100),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 166/394 (43%), Positives = 256/394 (65%), Gaps = 4/394 (1%)

Query  10   PLADTTLSSLEPEAGAYRELDSPGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPEVG  69
            +L+   + +  P    Y+  D  GLY+ VK  G + W L+Y+ + GK   L+LG YP+V+
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIA-GKEKKLALGVYPDVS  60

Query  70   GAFARQKAADLRSDASEGKNPITSKKARQAAEIDAANDTFEALAREWHTSRLSGWDAGTA  129
             A AR K  D R   SEG +P   K+  + ++  +A +TF+ALA EWH  +  +W  + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  130  KRILGALERHVFPSLGKRPYTSIMSMEWMELLRGLERQGILEQMSRVRAYCKDIYDLARV  189
            + +L AL++++FP LGKR+ T I+++E +E+LR +E++G LE++ +VR YC++I+  A  
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  190  TGRAVNNPLEGVHKFLSSGKAENYAHVSPDELPGLLRAIRSYPHAKDVQLGLRLLTLIAV  249
            TGRA  NP   +   L++ KA +++H+ +DELP +LR +  Y  +   +++  LL L ++
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  250  RPSELREAHWVEFDFDKKLWTIPVERKGRKKGREHLVPLCTQAVEALSELRQFTGAYPLL  309
            R  ELR A+W E+DFD+ LWTIP  R   K  R H+VPL  Q  + L +L+ F+G Y L+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRM--KMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  310  FPGRSDHTKPRSDTVFLMALRRLGYEGRQTGHGFRHIASTILNEHGYPADHIEAQLSH-K  368
            FPGR D  KP S++ + M L+R+GY+GR TGHGFRH  STIL+E+G+ +  IE QL+H  
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  369  AQGVRGIYNKAQYLEQRTQMMQWYADHLDALETD  402
             +++RG YN A Y++ R +MMQWYAD +D+L  +
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

199) NAL212_1009 in NC_015222


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 177/390 (46%), Positives = 265/390 (68%), Gaps = 3/390 (0%)

Query  2    LTDTAIRNAKPRDKFYKVSDSGGLYLLVKATG-KYWRMDYRFVGKRKTLAIGVYPTVSLV  60
            LT   +  A+P++K YK+SD  GLYLLVK+TG +YWR+ YR+ GK K LA+GVYP VSL 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  61   AARKKRDEARELLGKHIDPSLAKAINKRIVLTAAENTFKAVALEWHTKTSKSWAESTANN  120
             AR KRD+AR +++   DP+  K  +K     +A NTF A+A EWH   S SW+ES A +
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  121  IKRYLEKDIFPWLGNRAIKDIGAPDLLAVLRKIESRGAHEKAQRCREYAGRVFRYAIATG  180
            +   L+KDIFP LG+R++ DI + ++L +LR+IE RG+ EK ++ R+Y  ++FRYAIATG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  181  RAERDPSGDLRGALTPVKVKHHASITEPKAIGALLRSIWGFNGSYITKCALQLAPLVFVR  240
            RA  +P+++L ++L++ K  H + +  +  +  +LR +  ++GS +T+ A +L  L  +R
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  241  PGELRQAEWQEIDFDKQEWRIAGNKMKMGEAHIIPLSPQVIEILQSIHPLTGDGQYIFPS  300
              ELR AEW EIDFD+  W I+ ++MKM   H++PLS QV +ILQ +  ++G+ + +FP+
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  301  IRSSARPMSENTINAALRRMGYEKDEMTGHGFRSMASTLLHEHGWPHEAIERQLAHAERN  360
                 +PMSE +IN  L+R+GY+ +  TGHGFR   ST+LHE+G     IE QLAH ++N
Sbjct  302  RCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KVVAAYNYAEHLPKRKEMMRWWADYLDELA  390
             + ++YN A  +  R+EMM+W ADY+D L+
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSLS  390

200) SYN_01916 in NC_007759


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  293 bits (1096),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 168/396 (43%), Positives = 269/396 (68%), Gaps = 6/396 (1%)

Query  16   IPLTDMKVQKARPQDKPIALFDGGGLYLLITPSGGKLWRFKYRFDKKEKKLALGSYPEIS  75
            ++LT  +V+ ARP++K   L D  GLYLL+  +G++ WR+KYR+  KEKKLALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  76   LQDARRKREDARRLLANNIDPDSIRKAQKQA-KTEETETFEVIGREWHTKFTPTWTPGHA  134
            L +AR KR+DAR+++++  DP+  ++ +K + K   T+TF+ ++ EWH   + +W+ + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  135  VTIMSRLERDLFPWIGKRPINQIKAPELLAVLRRVESRGALESAHRIRTIAGQVFRYAVA  194
             +++  L++D+FP +GKR++ +I + E+L +LRR+E RG+LE  +++R    Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  195  TGRAERDPAADLKGALPQPRERHHAALTEPKEVAPLLRALDGYQGHFVVKCALRLAPMFF  254
            TGRA  +PA++L ++L+ P+  H + L  + E++ +LR L  Y+G  V + A  L  +  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  255  TRPGELRNAEWSEIDLDEAVWNIPAHKMKMKQAHIVPLCRQAVEILTELKEVTGPSRYVF  314
             R  ELR+AEWSEID+D+A+W IP  +MKM++ H+VPL RQ  +IL +LK  +G  R VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  315  PSGRSFARPMSNNAVNAALRRMGYDRETMTGHGFRAMARTILDEVLHVRPDYIEHQLAHA  374
            P+   + +PMS+ ++N  L+R+GYD    TGHGFR    TIL+E     +  IE QLAH 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  375  VRDPNGRAYNRTAHLEERRKMMQIW-ADYLDGLKAN  409
             +++   +YN++  ++ RR MMQ W ADY+D+L  +
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQ  392

201) Pcar_1823 in NC_007498


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  292 bits (1094),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 176/400 (44%), Positives = 274/400 (69%), Gaps = 13/400 (3%)

Query  7    PLSATKVKKAKPAEKQYTLFDGQGLFLLVTPTGSKLWRFKYRLNGKPKLMSFGAYPEVSL  66
            +L+A +V  A+P EK+Y L D +GL+LLV  TG++ WR+KYR+ GK K +++G YP+VSL
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  67   EQAREKRTAARKQVANGIDPCVVRRAVKESQ-AAGEGSFEVVAREWHQKFSSTWSESHAK  125
             +AR KR  ARK +++G DP   +R  K +Q  ++  +F+ +A EWHQ  S +WSES A+
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  126  TQLGRMERDLFPWLGDRPIVEITSPELLAVLRRIESRGALETAHRVKTICGQIFRYAIAT  185
            + L  +++D+FP LG R++ +I + E+L +LRRIE RG+LE  ++V+  C QIFRYAIAT
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  186  GRAERDPAADLKGALPPVQATHHAAMTKPGDLADLLRTIDAYEGSHVVRCALRFAPLVFV  245
            GRA  +PA++L ++L++ +A+H + + ++++L+ +LR +  Y+GS V R A  +  L  +
Sbjct  182  GRATVNPASELTSTLAAPKAAHFPHL-RADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  246  RPGELRQAEWSEFDLDAGEWNIPVERMKLPKKTKIRRAGEAHLVPLSKQAVEILRDLQPL  305
            R  ELR AEWSE+D+D + W IP  RMK+ +K         H+VPLS+Q  +IL++L+ +
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRK---------HVVPLSRQVTDILQQLKTF  291

Query  306  TGDGLYVFPSVRSAGRPMSDNTINAALRRLGYSKDEATGHGFRATARTILDEVLQVRPDL  365
            +G+   VFP+     +PMS+ +IN  L+R+GY  + ATGHGFR T  TIL+E     +  
Sbjct  292  SGQYRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAW  349

Query  366  IEHQLAHSVRDPLGRAYNRTSFLPERREMMQLWADYLDGL  405
            IE QLAH  ++++  +YN++ ++  RREMMQ  ADY+D+L
Sbjct  350  IEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

202) NCGM2_0360 in NC_017549


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  291 bits (1090),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 193/396 (49%), Positives = 278/396 (71%), Gaps = 4/396 (1%)

Query  1    MPLTDSAIKTAKPKEKPYKLSDAQGLYLLVNPNGSKLWRLKYRVGGKEKGLAFGAYPTVT  60
            M+LT   + TA+PKEK YKLSD +GLYLLV+  G++ WRLKYR++GKEK LA+G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LqqarqrrdearqqlaqGEDPGeqkkask-qakkvseLTFETLAREWYAYNAPRWAESTA  119
            L +AR +RD+AR+ +++G DPGE+K+  K   K  +  TF++LA EW   ++  W+ES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  YKAKLYLENDLIPGIGSRPIAAITRPDLVDLVRKVEARGTLNAAGKIRQWLHQIYRYALA  179
                  L++D++P +G R+++ I   ++++++R++E RG+L+   K+RQ  +QI+RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGVVESNPATDLDVVaapakaarhhphlpFAELPELLEKLATAKLHTLTRSAIRLLMLTA  239
             G    NPA++L    A++KAA+     +  ELP +L KLA      +TR A  LL+LT+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRAAPWCEFDLDTATWTIPAARMKARRSHVVPLPRQAVTILRQLHELTGSYSLLF  299
            +R  ELR+A W E+D+D A WTIP +RMK RR HVVPL+RQ   IL+QL  ++G Y L+F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  PGQQNAERPMSENTINKALRLVGYGGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDK  359
            PG+ + ++PMSE +IN  L+ +GY+GR TGHGFRH +ST L+ +G+N  WIE QLAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEIRGTYNHATYLEQRRGMMQAW-ADSIDALCSGAN  394
            + IRGTYNHA Y++ RR MMQ W AD ID+L    +
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

203) Dret_1610 in NC_013223


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  290 bits (1084),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 166/395 (43%), Positives = 275/395 (70%), Gaps = 7/395 (1%)

Query  1    MALTVKAIQAAKPREKLYRLNDERGLYLEIPPKGAYRWRFRYRFHGKPKMVSLGRYPDIS  60
            MALT + +++A+P+EK Y+L+DERGLYL +   GA  WR++YR+ GK K ++LG YPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKQAREKRDEMRALVASSIDPSNYLRQARHAAK---DDSFEAVAREWHKKFKSRWTEGHA  117
            L +AR KRD+ R +++ + DP++  R+ + + K    ++F+A+A EWH+     W+E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ATVLTRLEQNAFPWIGSQPIDSVTPLDILPLLRRIEDRGAIELAHRVRGIISQVFRFAVA  177
             +VL  L+++ FP +G +++  + PL++L +LRRIE RG++E  ++VR   +Q+FR+A+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  NERASRDPASDLRDALTPRQENHFAAITNPSEIPALLGAISEYQGHFVTRCALRLASLVF  237
              RA+ +PAS+L  +L++ +  HF+ +  + E+P +L  ++EY+G  VTR A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHL-RADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  238  VRPGELRKAEWDEIDLAHQEWRLPPAKTKLRKTHIIPLAHQACAIFNEIHPLTGTGRYVF  297
            +R  ELR AEW EID+ +  W +P ++ K+R+ H++PL++Q   I++++  ++G  R VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  298  PSARDKNKPMSENTINAALRQLGFSKEKMTAHGFRSMASTRLNELGWHPDAIERQLGHTE  357
            P+  D NKPMSE +IN  L+++G+   + T+HGFR   ST L+E G ++  IE QL+H +
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  358  KNGVRAAYNHAEYLEERRKMMQAW-ADYLDKLTNK  391
            KN++R++YNHA Y++ RR MMQ W ADY+D L+++
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQ  392

204) MICA_2451 in NC_016026


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  290 bits (1087),  Expect = 6e-80, Method: Compositional matrix adjust.
 Identities = 177/397 (45%), Positives = 268/397 (68%), Gaps = 7/397 (1%)

Query  1    MTLTNTTCKNAKPKEKPYKLADGGGLYLLVNPNGAKHWRLKYRFLGKEKLLAIGPYPLTS  60
            M+LT      A+PKEK YKL+D  GLYLLV+  GA+ WRLKYR+ GKEK LA+G YP  S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadarqarddaKKLIQSGADPVSHKREGKRNALRNAQNTFEAVALEWVENQKERWSPKYA  120
            LA+AR  RDDA+K+I  G+DP   KR  K     +A NTF+A+A EW +++   WS  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVLRGLTVNIFPEIGQRPIAQITPPELLDALRKIEKRGALDIAGRTKQICGQVFRYGIQ  180
              VL +L  +IFP +G+R++++I P E+L+ LR+IEKRG+L+   + +Q C Q+FRY+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGKCTRDASADLRGALKGRKAEHFASIDPKELPAFLKALGQNDARLYARTRRAIHLSMLC  240
            TG+ T +++++L ++L + KA HF+ + + ELP FL+ L++ ++   + TR A +L +L 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGS--PVTRMATNLLLLT  238

Query  241  FTRPGEIRQAQWSEMDFEARQWVIPAERMKMRRDHIVPLSMQAIAILEAQREETGKLNTP  300
              R  E+R A+WSE+DF+   W IP  RMKMRR H+VPLS Q   IL+  +  +G+    
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL-  297

Query  301  YVFPSQIQPRKPMSDGTVNQAVKRLGYTDRMTAHGFRALARTAIREALGYDSEIIEKQLA  360
             VFP++ +  KPMS++++N  +KR+GY +R T+HGFR    T ++E  G++S  IE QLA
Sbjct  298  -VFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  361  HRTSNPLGEAYDRTQFLSQRKKMMQDW-ADHLDSIAH  396
            H   N++  +Y+++ ++  R+ MMQ W AD +DS+++
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSE  391

205) AMBLS11_09695 in NC_018692


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  290 bits (1087),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 170/395 (44%), Positives = 265/395 (68%), Gaps = 9/395 (2%)

Query  1    MPLTDRAIKAIKPADKDQWVSDKDGLRLLVKSNGNKFWRLKYRFAGKQKTLALGSYPETP  60
            M+LT R + + +P +KD  +SD  GL LLVK+ G ++WRLKYR+AGK+K LALG YP+ +
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSKARELTMQARLTVKSGVDPAAEKREKVREEQRLNEDLFMNVAMEWWEQQSGGWTENHA  120
            L+ AR    +AR  +  G DP+  KR     ++    + F  +A EW +++S +W+E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RRVWLRLKDNSFTALGKRPISTIRPRDVIETVREIEKRGALDVAQRVLQDIGRVCRYAVQ  180
            R V   L  + F  LGKR+++ I P +++E +R IEKRG+L+  ++V Q   ++ RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TERINFNPASELSDVLKSRKVEHRASLPREQLPAFVKALSTYEEKGRLLTKYAIQLLVLT  240
            T R   NPASEL+  L + K  H + L  ++LP F++ L+ Y+  G  +T+ A +LL+LT
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH--GSPVTRMATNLLLLT  238

Query  241  FVRPGELRGARWEEFNFDDNIWRIPADRMKMRSEHIVPLSQQALQVIELIKPITQQYQLL  300
             +R  ELR+A W E++FD+ +W IP  RMKMR  H+VPLS+Q  ++++ +K ++ QY+L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPSERDRNDPMSDNTMRRAIFKLGYDGTKPGKAKANPHGFRATASSILNEQGFNPDAIER  360
            FP+  D N PMS+ ++   + ++GYDG      +A  HGFR T S+IL+EQGFN+  IE 
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDG------RATGHGFRHTMSTILHEQGFNSAWIEM  352

Query  361  QLSHMERNGVRAAYTHHARYLDERKEMMQWWADYV  395
            QL+H+++N++R++Y +HA Y+D R+EMMQW ADY+
Sbjct  353  QLAHVDKNSIRGTY-NHALYIDGRREMMQWYADYI  386

206) AHML_14825 in NC_021290


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  290 bits (1086),  Expect = 8e-80, Method: Compositional matrix adjust.
 Identities = 176/388 (46%), Positives = 272/388 (71%), Gaps = 1/388 (0%)

Query  1    MPLSDTAARQAKFTGKQQKLSDEKGLFLLITSSG-KYWRLKFRFGGKEKVLALGVYPEVS  59
            M+L+      A+   K+ KLSDE+GL+LL+ ++G +YWRLK+R++GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  60   lkearvkreearrllaDGIDPSLARKQSKVASRLASENSFEVIAREWHQGQLARWSPGHA  119
            L EAR+KR++AR+++++G DP+  +++ K++ ++++ N+F+ +A EWHQ +   WS + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  QRVIESLEADAFPELGLVPVAELTAPIMLDALRKIEARGATETAGRVLQRISSVMRYAIQ  179
            + V+E+L+ D FP LG  +V+++ +  ML+ LR+IE RG+ E   +V Q  + + RYAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  TGRVSYNPAQDLKGALRATKQEHRPALPRADLPEFYRRLAAEPLNPATRLAIHLLMLTMT  239
            TGR + NPA +L ++L A K  H P L   +LP F R+LA    +P TR+A +LL+LT  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  240  RPGEVRFARWDEFDMARAEWRIPAERMKMRAPHIVPLSRQALAVLEELRLISGHCELLFP  299
            R  E+R A W E+D   A W IP  RMKMR  H+VPLSRQ   +L++L+ +SG+  L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  300  SERKLTDPMSENTLSYAMGRMGYKGIATPHGFRALASTILNEEGFDPDVIERQLAHAERN  359
            +   +  PMSE +++  + R+GY G AT HGFR   STIL+E+GF++  IE QLAH ++N
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  KVRAAYHRAEYLDDRRKLLQWLADFYES  387
             +R++Y++A Y+D+RR ++QW AD+ +S
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDS  388

207) Gbem_2993 in NC_011146


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  290 bits (1085),  Expect = 9e-80, Method: Compositional matrix adjust.
 Identities = 170/395 (44%), Positives = 269/395 (69%), Gaps = 6/395 (1%)

Query  1    MPLTDIAVKSAKPKEKDYKLSDGDGMYLLVTAGGGKRWRLKYRFLGKEKLLALGTYPDIS  60
            M+LT   V +A+PKEKDYKLSD  G+YLLV + G++ WRLKYR+ GKEK LALG YPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARNKRHEARKQLGHGIDPGAERKALKEVQAQEAAEIKNSFKLVACEWHSKFSGTWSN  120
            L+EAR KR++ARK +++G DPG  ++  K  Q   A+   N+F  +A EWH   S +WS+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISAT---NTFHALATEWHQHKSLSWSE  117

Query  121  GHAGTIMDRLTRDVFPWLGDKPICEVEPVDILGVLRRVESRGALETAHRIRTICGQVMRY  180
            + A ++++ L +D+FP LG +++ ++ P+++L +LRR+E RG+LE  +++R  C Q+ RY
Sbjct  118  SYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  181  AVATGRAKRDSAADLRGALPPANAKHHASMTDPKEVAELLRAIDGFKGTFHVKCALQLAP  240
            A+ATGRA  ++A++L ++L++++A H + +  + E++ +LR +  + G+   + A +L  
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  241  LLFVRPGELRQMEWAELDLDGRMWNIPGVKMKMGQPHIVPLAHQAAEILGQLKPLTGAGR  300
            L  +R  ELR  EW+E+D+D  +W IP  +MKM + H+VPL++Q ++IL QLK ++G  R
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  301  YVFPCHRSPLRPMTNNAVNAALRRMGYTSDEMTGHGFRAMARTILDEVLQVRPDFIEHQL  360
             VFP +    +PM++ ++N  L+R+GY +   TGHGFR    TIL+E     +  IE QL
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  361  AHAVKDPNGRAYNRTAHLAERRKMMQTWADYLDGL  395
            AH  K++   +YN++  +  RR MMQ  ADY+D+L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

208) PFLU0179 in NC_012660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  289 bits (1082),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 173/389 (45%), Positives = 255/389 (66%), Gaps = 2/389 (0%)

Query  10   PLADTTLAGLEPENATYREQDGNGLYFRVKPNGQKSWELRYKKPDGKWSWLGLGGYPDIS  69
            +L+   +    P +  Y+  D  GLY+ VK  G + W L+Y+ + GK   L+LG YPD+S
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIA-GKEKKLALGVYPDVS  60

Query  70   GSLARQKAAQLREDASTGKNPLVSKQARKVADQVAANNTFEALGREWFEARRTSWEAGTS  129
             + AR K  + R   S G +P   K+  K++++++A NTF+AL+ EW + +  SW  + +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  130  RRVLGALELHVFPVFGKRVYTEILPLEWMEFLRGMEQKGIIEQMGRVRAFCKEIYDLARV  189
            R VL AL+ ++FP +GKR  T+ILPLE +E+LR +E++G +E++ +VR +C++I+  A  
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  190  TGRAVHNPLEGLSKFLQSRSAENYAHVSIEELPALLRAINSYPHAKDVRIGlrllsllas  249
            TGRA  NP   L+  L +  A +++H+  +ELP +LR +  Y  +   R++  LL L + 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  250  rPSEIREARWSEIDLSKKLWTIPAERMKRRREHVVPLSRQAIEALTELRTLTGAYPLLFP  309
            R  E+R A WSEID+ + LWTIP  RMK RR HVVPLSRQ  + L +L+T++G Y L+FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  310  GRKDRTIPRSNTVFLMALRRLGYAGRQTGHGFRHIASTILNEQGFDENHIEAQLSHA-KE  368
            GR D   P S++ + M L+R+GY GR TGHGFRH  STIL+EQGF+   IE QL+H  K+
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  369  GIAGVYNKAVYLPQRRVMMQWYADHLDAL  397
            +I G YN A+Y+  RR MMQWYAD +D+L
Sbjct  361  SIRGTYNHALYIDGRREMMQWYADYIDSL  389

209) MADE_1010570 in NC_011138


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  289 bits (1081),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 169/401 (43%), Positives = 269/401 (68%), Gaps = 9/401 (2%)

Query  1    MPLTDIQIKQAQASTKDIWLTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVS  60
            M+LT  Q+  A++  KD  L+DE+GL LLVK  G++YWRLKYR+ GK+K LA+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKDAREAVSEARRQLRDDIDPSAIKQEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHA  120
            L +AR    +AR+ + ++ DP+  K+  K    +S  + F++ A  W + +   WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  ARIWTRLNDNALKTLGKRPIGEITPQDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQ  180
              +   L+ + +  LGKR++ +I P +++  +++IE RG+L+  ++V Q   ++ R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGVLLHNPASELSGILEKRKTSHRASLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHT  240
            TG    NPASEL++ L   K++H + L  +ELP FLR L  YH  G  +T++A +LL+ T
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH--GSPVTRMATNLLLLT  238

Query  241  FVRPGELAGARWDEFDLEEKLWRIPAHRMKMKSDHIVPLSRQALAVLENTKPFSARFEFV  300
             +R  EL +A W E+D+++ LW IP  RMKM+  H+VPLSRQ   +L++ K FS+++ +V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPSERDRFKQMSDNTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETGFNPDAIER  360
            FP+  D  K MS+ ++ M + R+GYDG      +A  HGFR T S+IL+E GFN+  IE 
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDG------RATGHGFRHTMSTILHEQGFNSAWIEM  352

Query  361  QLSHMERNGVRAAYTHHARYLEERKEMMQWWSDYLDSLKNN  401
            QL+H+++N++R++Y +HA Y++ R+EMMQW +DY+DSL ++
Sbjct  353  QLAHVDKNSIRGTY-NHALYIDGRREMMQWYADYIDSLSEQ  392

210) Neut_1125 in NC_008344


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  288 bits (1080),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 156/389 (41%), Positives = 258/389 (67%), Gaps = 2/389 (0%)

Query  1    MKLTDSAIRAAKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETT  60
            M LT   + +A+PKEK+YKL+D  GL LL+   G++ WR +Y +  KE  L+LG YP+ +
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTERHV  120
            LA+AR  +D+ + I+ +G +P+  ++ EK    +S  N+F+A+A  W  H   + +E   
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  AYTLRRMEADIFPFIGAKPVNTLTAMHFIELVYKVQSRGALDIAKRVLTMCGQVMRYAVQ  180
               L  ++ DIFP++G ++V  + +++ +E++ +++ RG+L+  ++V   C Q+ RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  HGLSERNPAADIKPADILKKRKKVNHKRIPESELPDLLQKINQYDGQPLTRLALQLMTLT  240
             G +  NPA+++ ++  L   K  +  ++   ELP +L+K+ +Y+G P+TR+A +L+ LT
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FIRTSELIGGRWEEISFDNAEWRIPPERMKMRSQHIVPLSDQAITVLREIKALNSDPVLL  300
             +RT EL ++ W EI FDNA W IP  RMKMR +H+VPLS Q   +L+++K+++++  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPSERRNGKTMSNNTIIYALYRIGYKGRMTGHGFRGLASTVLHEKNFDHKWIELQLAHAE  360
            FP+     K MS+ +I   L RIGY GR TGHGFR   ST+LHE+ F+  WIE+QLAH +
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RDEVSAAYNHALYLEQRRKMMQWWGEYIE  389
            ++ + ++YNHALY++ RR MMQW ++YI+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYID  387

211) Neut_1755 in NC_008344


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  288 bits (1080),  Expect = 2e-79, Method: Compositional matrix adjust.
 Identities = 156/389 (41%), Positives = 258/389 (67%), Gaps = 2/389 (0%)

Query  1    MKLTDSAIRAAKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETT  60
            M LT   + +A+PKEK+YKL+D  GL LL+   G++ WR +Y +  KE  L+LG YP+ +
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTERHV  120
            LA+AR  +D+ + I+ +G +P+  ++ EK    +S  N+F+A+A  W  H   + +E   
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  AYTLRRMEADIFPFIGAKPVNTLTAMHFIELVYKVQSRGALDIAKRVLTMCGQVMRYAVQ  180
               L  ++ DIFP++G ++V  + +++ +E++ +++ RG+L+  ++V   C Q+ RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  HGLSERNPAADIKPADILKKRKKVNHKRIPESELPDLLQKINQYDGQPLTRLALQLMTLT  240
             G +  NPA+++ ++  L   K  +  ++   ELP +L+K+ +Y+G P+TR+A +L+ LT
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FIRTSELIGGRWEEISFDNAEWRIPPERMKMRSQHIVPLSDQAITVLREIKALNSDPVLL  300
             +RT EL ++ W EI FDNA W IP  RMKMR +H+VPLS Q   +L+++K+++++  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPSERRNGKTMSNNTIIYALYRIGYKGRMTGHGFRGLASTVLHEKNFDHKWIELQLAHAE  360
            FP+     K MS+ +I   L RIGY GR TGHGFR   ST+LHE+ F+  WIE+QLAH +
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RDEVSAAYNHALYLEQRRKMMQWWGEYIE  389
            ++ + ++YNHALY++ RR MMQW ++YI+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYID  387

212) i14_4873a in NC_017652


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  288 bits (1078),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHSTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGSHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

213) i02_4873a in NC_017651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  288 bits (1078),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHSTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGSHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

214) EbC_31530 in NC_014306


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  287 bits (1076),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 172/387 (45%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIDAAKPKDKPYRLLDSNGLYLYVPVSGKKVWQLRYKIEGKEKVLTVGKYPLMSLQ  61
            LT +Q+++A+PK+K Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP +SL 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWLARKDVSGGVDPIKAKKQ------LARVNTFGAIYREWYEHKRQVWSLKYAEE  115
            EAR K   ARK +S G DP   K++      ++  NTF A+  EW +HK   WS  YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LGRMFADDVLPMIGDMEISEIEPMQILSVIRLYEERGAMERANKARRRCGEVFRYAIITG  175
            +   +  D++P +G   +++I P+++L ++R  E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNYPFLPSDQIPAFNQALAGYSGSVVSRVATQFLQYTALRT  235
            RA  NPA++L+ ++ + +  ++P L +D++P F + LA Y GS V+R+AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  IEMRSLKWTDIDLATKTITIPPEVMKGRRAHIVPLSDQVITLLESLRPITQPVSLFVFAG  295
            IE+RS  W++ID+     TIP   MK RR H+VPLS QV  +L+ L+ ++    L VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL-VFPG  301

Query  296  RNDKKKSLSDNAVLQVIRQIGYEGLASGHGFRHQFSTIMNEHEWPNDAIERQLSHHDSGT  355
            R D +K++S+ ++  V+++IGY+G A+GHGFRH  STI++E+   +  IE QL+H D  +
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  IRGIYNHAQYLEKRREMMQWWADWIDG  382
            IRG YNHA Y++ RREMMQW AD ID+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

215) PputW619_4347 in NC_010501


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  287 bits (1074),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 179/396 (46%), Positives = 272/396 (69%), Gaps = 4/396 (1%)

Query  1    MALTDTAIRTARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVT  60
            MALT   + TARP++K Y+++D +GL L V T+G++ WRL+YR+ GK K L+LG YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAHARERRDAARKLLSQGIDPSAYkqqekaaaeaqaltl-etlaREWYDYNQPRWAPATA  119
            LA+AR +RD ARK++S+G DP+  K++EK +    A    ++LA EW + +   W+ + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  SKALQYLESDIFPLIGKRPAAEVQRPELVDLVRKIEQREAFNVARKVRQWLSQIFRFGLA  179
               L+ L+ DIFP +GKR+ +++   E+++++R+IE+R +++  RKVRQ  +QIFR+++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  KGVVAGNPATDLDvvaahaprtrhhphvSeaelpellekleaaQCDFTSKIAIRLLLLTA  239
             G  + NPA++L    A +  ++     ++     L    E       +++A  LLLLT+
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSP-VTRMATNLLLLTG  239

Query  240  VRPGELRLAPWDEFDLESATWTIPAARMKARRPHIVPLPRQAVNLLRALHELTGTYPLAF  299
            +R  ELR A W E+D+++A WTIP +RMK RR H+VPL+RQ  ++L+ L  ++G Y L F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  PGRNDRSRPMSENTVNKALSTMGYEGRQTGHGFRHLLSTSLNTRGYNRDWIERQLAHGDQ  359
            PGR D ++PMSE ++N  L  +GY+GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DSIRDTYNHAHYLEQRREMMQTW-ADHVDALAEQTS  394
            +SIR+TYNHA Y++ RREMMQ W AD +D+L+EQ S
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

216) EcSMS35_4753 in NC_010498


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  287 bits (1073),  Expect = 9e-79, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V +A+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELSLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

217) UMNK88_2903 in NC_017641


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 179/387 (47%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  + MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEKQLAHANSGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  IRGIYNHAQYMDKRREMMQWWADWIDE  382
            IRG YNHA Y+D RREMMQW AD ID 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

218) C380_06330 in NC_018708


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  286 bits (1071),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 170/374 (46%), Positives = 261/374 (70%), Gaps = 4/374 (1%)

Query  21   RLADEKALYLEVTAAGGKYWRWKYRYGGKEKRLALGVYPDVTLAQAREARDQARKVLAGG  80
            +L+DE++LYL V ++G++YWR KYR +GKEK+LALGVYPDV+LA+AR  RD+ARK+++ G
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEG  78

Query  81   DDPGQLKRDAKMTSAVHQANTFEAVARVWWEHWRDGKSERHAAYAIKRLEADAFPVLGAR  140
            +DPG+ KR  K+T  +  +NTF+A+A  W +H   + SE  A   +  L+ D FP LG R
Sbjct  79   GDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKR  138

Query  141  PIANITAKDLTRMAKAVQDRGAIDLAHRVLQMAGQVMRYAVAHDLIERNPATDVKPSDTL  200
            ++++I + ++  + + ++ RG+++  ++V Q   Q+ RYA+A +    NPA+++  + TL
Sbjct  139  SVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASEL--TSTL  196

Query  201  RSRRKENYARLGEKELPELLRKIEAYQGGPYTRLAMQLMALTFVRTTELIAARWAEFDLQ  260
             + +  ++++L   ELP +LRK+  Y+G+P TR+A +L+ LT +RT EL +A W+E+D++
Sbjct  197  AAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFD  256

Query  261  AAEWRIPPERMKMKTPHIVPLSPQAVEVLKVLHTLSGGRALLFPGERDHDKPMSNNTILK  320
             A W IP  RMKM+  H+VPLS Q  ++L+ L T+SG   L+FPG  D +KPMS+ +I  
Sbjct  257  NALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINM  316

Query  321  ALERMGYKGRMTGHGFRGMASTILHEQGYAHHAIELQLAHQERNEVSAAYNHALYLKERR  380
             L R+GY GR TGHGFR   STILHEQG+    IE+QLAH ++N + ++YNHALY+  RR
Sbjct  317  VLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRR  376

Query  381  VMMCDW-ANHLDKL  393
             MM +W A+ +D L
Sbjct  377  EMM-QWYADYIDSL  389

219) Gbem_3253 in NC_011146


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  286 bits (1069),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 182/392 (47%), Positives = 266/392 (68%), Gaps = 4/392 (1%)

Query  1    MALTDVKVRNAKPGEKQAKLSDGDGMYLLVTPQGGKCWRLKYRIAGKEKVLALGTYPEIS  60
            MALT  +V  A+P EK+ KLSD  G+YLLV   G++ WRLKYRIAGKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARERKDAARKLIANGHDPGevkkaqkaaktaeaeNTFQAVTQEWHGRFKSQWSEKHA  120
            L+EAR ++D ARK+I++G DPGE K+ +K ++   A NTF+A++ EWH +    WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EQILRRLELDVFPWLGTRPVGEIKAPELLAVLRRIEMR-TLETAHRVRIACSQVFRYAVA  179
              +L  L+ D+FP LG R+V +I + E+L +LRRIE R +LE  ++VR  C+Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  TGRAERDPVADLKGALPPVKNNHFAALTDPKAVAPLLRAIDGFEGSFVVKCALKLAALTF  239
            TGRA  +P ++L ++L++ K  HF+ L  +  ++ +LR +  ++GS V + A +L  LT 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  VRPGELRHAEWSEIDLEAARWEIPAERMKMKVAHLVPLSTQAVDILKELHPLTGSGTYVF  299
            +R  ELR AEWSEID++ A W IP  RMKM+  H+VPLS Q  DIL++L  ++G    VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  PCHRSPLRCMSENAVNAALRRMGFEKSEITGHGFRAMARTILDEVLHVRPDFIEHQLAHA  359
            P +    + MSE ++N  L+R+G++ +  TGHGFR    TIL+E     +  IE QLAH 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  360  VKDPLGRAYNRTSHLAERQKMMQTWADFLDGL  391
             K+++  +YN++  +  R+ MMQ  AD++D+L
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

220) ECP_4521 in NC_008253


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  286 bits (1069),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

221) EKO11_1417 in NC_016902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 179/387 (47%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHA Y+D RREMMQW AD ID 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

222) intS in NC_017635


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 179/387 (47%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHA Y+D RREMMQW AD ID 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

223) intS in NC_017664


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 179/387 (47%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHA Y+D RREMMQW AD ID 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

224) intC in NC_017663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYANE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPEFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  + MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHA Y+D RREMMQW AD ID 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

225) ECABU_c48360 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

226) UM146_21610 in NC_017632


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 266/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

227) KN400_0440 in NC_017454


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 167/394 (43%), Positives = 274/394 (70%), Gaps = 5/394 (1%)

Query  6    IPLSALKIDKAKPQEKEVKLYDGGGLFLLITPSGGKLWHLKYRYGGKEKKLALGAYPLVS  65
            ++L+A +++ A+P+EK+ KL D  GL+LL+  +G++ W+LKYR +GKEKKLALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  66   LEGARQRREDAKKLLANGVDPGEMKKVLKSAAKDKAANTFEVVAREWHHKFSSAGKWSPT  125
            L  AR +R+DA+K++++G DPGE K+  K + K  A+NTF+ +A EWH+    +  WS +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQH--KSLSWSES  118

Query  126  HAADILHRLEKDIFPPLGARPISEIKPLDLLRVLERIASRGALDTAHRLRHHCGMIFRYA  185
             A  +L+ L+KDIFP LG R++++I PL++L +L RI  RG+L+  +++R+ C  IFRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  186  VVTERAERDVAADLRGALPPVKNGHHAAPTTPQSLLPLLRAIDVYEGSYIVKCALQLLPL  245
            + T RA  + A++L ++L++ K +H  +   ++ L  +LR +  Y+GS + + A +LL L
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  246  FFCRPGELRAAEWTEFDFDKAIWEIPATRMKMKQPHIVPLSKQAIAILESLQSLTGSGKY  305
               R  ELR+AEW+E+DFD+A+W IP +RMKM++ H+VPLS+Q   IL+ L++++G  + 
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  306  LFPCQRSTQRCMSDNAYNAALRRMGFTKDEATAHGFRASARTILDEVLRIPVVLIEHQLS  365
            +FP +   ++ MS+ + N  L+R+G+  + AT+HGFR +  TIL+E   +    IE QL+
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  366  HSVRDPLGRAYNRTSHLDERKKMMQQWADYLDGL  399
            H  ++++  +YN++  +D R+ MMQ  ADY+D+L
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

228) intS in NC_011748


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 179/388 (47%), Positives = 264/388 (69%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHA Y+D RREMMQW AD +D+L
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSL  389

229) O3M_07705 in NC_018650


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 179/388 (47%), Positives = 264/388 (69%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHA Y+D RREMMQW AD +D+L
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSL  389

230) O3O_17880 in NC_018661


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 179/388 (47%), Positives = 264/388 (69%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHA Y+D RREMMQW AD +D+L
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSL  389

231) O3K_07755 in NC_018658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1064),  Expect = 4e-78, Method: Compositional matrix adjust.
 Identities = 179/388 (47%), Positives = 264/388 (69%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHA Y+D RREMMQW AD +D+L
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDSL  389

232) ECs3231 in NC_002695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1063),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 264/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDG  382
            +RG YNHA Y+D RREMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

233) intS in NC_013008


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1063),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 264/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDG  382
            +RG YNHA Y+D RREMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

234) ECH74115_3582 in NC_011353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1062),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 264/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHA Y+D RREMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

235) intC in NC_002655


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1062),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 264/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHA Y+D RREMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

236) CDCO157_2996 in NC_017906


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1062),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 264/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHA Y+D RREMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

237) intB in NC_007946


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1063),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 265/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARKLLANGVAPGDKKKNDKVEQ--SKARTFKEVAIEWYGTNK-KWSEDHA  117
            LA+AR++RD+ARK++++G  PG+KK+++K+ Q  S + TF  +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

238) CFSAN002050_22445 in NC_021818


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  284 bits (1063),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 268/407 (66%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWQLKYRFGGKEKKLAFGAYPTVT  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARKLREEARAVLSTGDDPGVKKQQEKQAKK--SGNTFEEVARKWLA-GNIRWTEAHA  117
            LA+AR  R++AR ++S G+DPG KK++EK ++K  + NTF+ +A  W    ++ W+E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKALRSLELHVFPLIGKIPVTDLKTADLLIPLRVAERKGNLETAARIQQRTTAIMRYAVQ  177
               L +L+ ++FP +GK +VTD+   ++L  LR  E++G+LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  ESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLERLEGYSGRLLTRLAVQLNLLIFI  237
             +  + NPA++LT+++A+P   H+P L  + +P +L +L  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWAEIDLDGAMWTIPAGREPIPGVRYSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W+EID+D A+WTIP +R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTMACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +    GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N++R++Y H A  +D R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

239) intS in NC_011750


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  283 bits (1061),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKSVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W  +DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICDNAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ + ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

240) CE10_2735 in NC_017646


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  283 bits (1061),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKSVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W  +DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICDNAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ + ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

241) ECO26_3335 in NC_013361


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  283 bits (1061),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMRGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  + MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

242) Rpic12D_3122 in NC_012856


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  283 bits (1060),  Expect = 8e-78, Method: Compositional matrix adjust.
 Identities = 165/394 (42%), Positives = 274/394 (70%), Gaps = 9/394 (2%)

Query  1    MSLTDIAIRTAKPTDKPYKLADGGGLYVEVYPTGGKLWRLKYRFGGKEKRLSFGAYPVVS  60
            M+LT   + TA+P +K YKL+D  GLY+ V  TG++ WRLKYR++GKEK+L++G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKDARERRDNAKRLLAGGIDPSIERKMQKAATVERAANSFETVGREWFARYSPTWAEGHA  120
            L +AR +RD+A+++++ G DP+  ++ +K +    A+N+F++++ EW  + S +W+E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  TKIIRRLEADIFPWLGGRPIAEITAPEVLTVLRRIEARGALDTAHRAHQNCGQIFRYAVA  180
              ++  L+ DIFP LG R++++I + E+L +LRRIE RG+L+  ++ +Q C QIFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAIRDPSGDLRGALPPAKHENFASITDPVKVAELLRAIDAFRGTLVVRCALLLAPMVF  240
            TGRA  +P+++L ++L+++K  +F+ +     ++ +LR +  ++G+ V R A  L  +  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRPGELRKAEWADFDLDAGEWRYLVTKTKT--AHLVPLATQAVAILRELHALTGHGRFVF  298
            +R  ELR AEW+++D+D + W    ++ K    H+VPL+ Q   IL++L +++G+ R+VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PGR-DPKKPMSDAAVNAALRRMGYDTRTEITGHGFRAMARTILHEELNYKPEIIEHQLAH  357
            PGR D +KPMS+A++N  L+R+GYD R+  TGHGFR    TILHE+  +++  IE QLAH
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  358  SVPDALGTAYNRTKFVKERRVMMQAW-ADYLDRL  390
               +++  +YN++ ++  RR MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

243) A11S_2095 in NC_020812


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  283 bits (1060),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 167/396 (43%), Positives = 265/396 (67%), Gaps = 7/396 (1%)

Query  1    MKLSDKTCKAAKPRESSYKLFDGGGLFLEITPNGSKLWRLKYRFLGKEKRISLGAYPIVS  60
            M L+ +   +A+P+E  YKL D  GL+L +   G++ WRLKYR+ GKEK+++LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARDGRERAKKQLVQGVDPSNAKQAHRREAIRNAENTFKAVALEWHEKQLARWTSTHA  120
            LA+AR  R+ A+K + +G DP++ K+ ++     +A NTF A+A EWH+ +   W+ + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  QNVTRRMEVDIFPYIGNRPIADIDAPELLSVLRRIEARGALDVTARVKQISGQVFRYGIA  180
            ++V   ++ DIFPY+G+R+++DI + E+L +LRRIE RG+L+   +V+Q   Q+FRY+IA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCQRDPSADLKGALKVNKTTSYACLDIKEMPEFLEKLERNEARLFATTRRAIKILMLT  240
            TGR   +P+++L ++L   K++ ++ L   E+P FL KL   ++   + TR A ++L+LT
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGS--PVTRMATNLLLLT  238

Query  241  FVRTGELINATWDEFDLENATWEIPGWRMKMRNPHIVPLSRQVIEILKEQKKETEHLTTP  300
             +RT EL +A W E+D++NA W IP  RMKMR  H+VPLSRQV +IL++ K  + +    
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL-  297

Query  301  WVFPSQVRPKDPMSNNTILFAIGRMGYKKRMTGHGFRALAMSNIKEKLGYRHEVVDRQLA  360
             VFP++   + PMS+ +I   + R+GY  R TGHGFR  +MS I +  G+    ++ QLA
Sbjct  298  -VFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRH-TMSTILHEQGFNSAWIEMQLA  355

Query  361  HAHRNKIDRAYDRAQFLDERRKMMGEW-ADYLDEVA  395
            H ++N I  +Y++A ++D RR MM +W ADY+D ++
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMM-QWYADYIDSLS  390

244) E2348C_2486 in NC_011601


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1057),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDE  394
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

245) APECO1_4218 in NC_008563


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

246) intS in NC_012759


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

247) EcDH1_1309 in NC_017625


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

248) intS in NC_017638


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

249) ECOK1_2630 in NC_017628


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

250) intS in NC_010473


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

251) intS in NC_000913


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

252) intS in NC_007779


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

253) intS_2 in NC_022370


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

254) intS in NC_011742


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

255) UM146_05080 in NC_017632


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

256) intC in NC_007946


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1055),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 178/387 (46%), Positives = 262/387 (68%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDE  394
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

257) GBP346_A3075 in NC_012695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1056),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 174/404 (44%), Positives = 269/404 (67%), Gaps = 10/404 (2%)

Query  1    MALTDMAIRRAKPMEKQQKLFDSGGLFLLVTPAGGKRWVLKYRFGGREKSLAFGTYPEVS  60
            MALT   +  A+P EK+ KL D  GL+LLV  +G++ W LKYR++G+EK LA+G YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVEARKKRDAAREKLAANIDPGEAKKAEKRTQRLNAENSFEAIAREWHAKYAPTWSDSHG  120
            L EAR KRD AR  ++   DPGE K+ EK TQ+++A N+F+A+A EWH   + +WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  NRILRRLEVDAFPWIGGKPMANLTPPDVLDILRRVEKRGALETAHRLRGNVGQVCRYAVA  180
              +L  L+ D FP +G ++++++ P ++L+ILRR+EKRG+LE  +++R    Q+ RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDVTSDLRGALPPPETEHFAAVTAPKELGELLRAIDSYRGTFPVLCALRLAPLVF  240
            TGRA  + +S+L ++L++P + HF+ + A  EL  +LR +  Y+G+     A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  QRPGELRAAEWEEFDLDAATWEIPSARMKRRKKDKASGGAHIVPLASQAISVLRELHLLT  300
             R  ELR+AEW E+D+D A W IP +RMK R+K       H+VPL+ Q   +L++L  ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRK-------HVVPLSRQVTDILQQLKTFS  292

Query  301  GNGRYLFSGARSKTRPMSDNTVNAALRRLGYDSSTMTGHGFRATARTIMAEQLGIPKEII  360
            G+ R +F+G     +PMS+ ++N  L+R+GYD+ + TGHGFR T  TI+ EQ G+    I
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYDRTVYLAQRGEMMQKWANYLDRLKAGAT  404
            E QLAH  K+++  +Y++++Y+  R EMMQ  A+Y+D L    +
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

258) Ent638_0463 in NC_009436


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1057),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 177/407 (44%), Positives = 272/407 (67%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDSNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G+RYWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQ--EEARTFEQLAVEWHATNK-KWSEEHS  117
            LA+AR +RD+ARK+++++ DPG+KK+++K+ Q    + TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDSYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSHRGSKMRTPHLVPLSKQALEILRQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q  +IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KHFCGEYELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G+Y L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

259) Galf_2041 in NC_014394


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 179/373 (48%), Positives = 261/373 (70%), Gaps = 6/373 (1%)

Query  22   DGDGMYIEVMPSGSKYWRLKYRYAGKEKRLALGVYPEVSLKdarerrdaarKLIANGTDP  81
            D  G+Y+ V  +G++YWRLKYR AGKEK+LALGVYP+VSL +AR +RD ARK+I++G DP
Sbjct  22   DERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDP  81

Query  82   GEAKQAQKREGKIAAANTFEAVAREWVENRSNDWTAGHKALTLRTLEQDAFPSIGRRPIA  141
            GE K+ +K   KI+A+NTF+A+A EW +++S  W+ +     L +L++D FP +G+R+++
Sbjct  82   GEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVT  141

Query  142  EISSSEVLATVRAIEKRGALEIAGRVLQRCSAVFRYAIATDRCKNNPAFKMSEALKSPTR  201
            +I + E+L  +R IEKRG+LE   +V Q C+ +FRYAIAT+R   NPA  ++ +L +P  
Sbjct  142  DILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKA  201

Query  202  SHYNTIEKGGFPKLLRDIDGYQGSPMTTYILQLMALTFTRTGELVNAEWKEIDLDRAEWL  261
            +H+  +  + +P +LR +  Y+GSP+T    +L+ LT  RT EL +AEW EID+D A W 
Sbjct  202  AHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWT  261

Query  262  IPAERMKMRRPHLVPLSVQAVAVFREAAKLSGDRVHVFPNRNDPSQPASNAIILRALGRM  321
            IP  RMKMRR H+VPLS Q   ++++   +SG+   VFP R D ++P S+A I   L R+
Sbjct  262  IPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRI  321

Query  322  GYTGKMTGHGFRSAASTMLNENKSKWGIHRDTIELQLAHVEKNASRAAYNFAEYLDERRT  381
            GY G+ TGHGFR + ST+L+E+    G++   IE+QLAHV+KN+ R++YN A Y+D RR 
Sbjct  322  GYDGRATGHGFRHTMSTILHEQ----GFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRRE  377

Query  382  MMQQW-ADHLDKL  393
            MM QW AD +D L
Sbjct  378  MM-QWYADYIDSL  389

260) APECO78_02320 in NC_020163


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 169/406 (42%), Positives = 264/406 (66%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V +A+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARNLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHA  117
            LA+AR++RD+AR+++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

261) CE10_5017 in NC_017646


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 169/406 (42%), Positives = 264/406 (66%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALT  +V +A+P +K+YKL+D  G+ LLV   G++YWRL+YR  GK+K LALGVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARVRRDEARNLLANGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHA  117
            LA+AR++RD+AR+++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + VL +L+ ++F+ LG R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFI  237
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
            K F G   L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A  ++ RR M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

262) Varpa_2722 in NC_014931


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  282 bits (1054),  Expect = 3e-77, Method: Compositional matrix adjust.
 Identities = 154/384 (41%), Positives = 260/384 (68%), Gaps = 3/384 (0%)

Query  1    MALTDMAARKAKPEVRSYNLTDGAGLYLQVTPAGGKLWRWNYRHDGKQKTMAFGSYPEVS  60
            MALT      A+P  + Y+L+D  GLYL V  +G++ WR +YR  GK+K +A+G YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   IADAREAHQAARKQKAAGADPMAQRKLDKIAGVMAREHSFKAIAQQWHDQWKPNKAERHA  120
            +A+AR  ++ ARK  + G+DP  +++ +K++  ++  ++F A+A +WH++   + +E  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RIVWGRLENDVFPAIGARPISEVKPSELVAMIKKIAGRGAPDMAKRCLEISGQVFRYAVA  180
            R V   L++D+FP +G R+++++ P E++ ++++I  RG+ +  ++  +   Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  HGISERNPAADIKPGDVLPPRKTNHFARVESSELPDLLRKIEAYSGTPATRLAMKLMAYT  240
             G +  NPA+++ +   L++ K+ HF+++ + ELP +LRK+  Y G+P TR+A +L+  T
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FVRTGELIGARWPEFDLDAAVWRIPPERMKMKTLHIVPLSTQAVEVLRTLQLVTGDSALL  300
             +RT EL +A W+E+D+D A+W IP  RMKM+  H+VPLS Q  ++L+ L+  +G+  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGERDHEKSISNNTILGALKRMGYAGRMTGHGFRGVASTELHEMGFEEAHIEAQMSHLK  360
            FPG  D +K++S+ +I   LKR+GY GR TGHGFR   ST LHE GF+ A IE Q++H+ 
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RNRVASAYDHSKYLKQRVAMMQTW  384
            +N + ++Y+H+ Y+  R  MMQ W
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-W  381

263) intS in NC_013941


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  281 bits (1052),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 176/387 (46%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  74   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  127
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKCREMMQWWADWLDG  394
            +RG YNHA Y+D  REMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

264) ECO55CA74_14300 in NC_017656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  281 bits (1052),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 176/387 (46%), Positives = 263/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIDPVka------kkassnnnsfsaIYKEWYEHKRQVWSAAYATE  115
            EAR K   ARK IS G DP          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS +W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +K++ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKCREMMQWWADWLDG  382
            +RG YNHA Y+D  REMMQW AD +D+
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

265) SARI_03312 in NC_010067


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  281 bits (1052),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 267/407 (66%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVT  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARKLREEARAVLSAGDDPGVKKQQEKQAKK--SGNTFEEVARRWLA-GNIRWTEHHA  117
            LA+AR  R++AR ++S G+DPG KK++EK ++K  + NTF+ +A  W    ++ W+E  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKILRSLELHVFPLIGNIPVADLKTADLLIPLRVAEKKGNLETAARSQQRTTAIMRYAVQ  177
              +L +L+ ++FP +G+ +V+D+   ++L  LR  EK+G+LE   + +Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  ESLIASNPANDLTGAIAPPPKNHYPALPLEQIPQLLERLEGYSGRLLTRLAVQLNLLIFI  237
             +  + NPA++LT+++A+P   H+P L  +++P +L +L  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWTEIDLDGAMWTIPTQRESIPGVRYSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W+EID+D A+WTIP  R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTMACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +    GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N++R++Y H A  +D R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

266) Bamb_0912 in NC_008390


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1047),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 173/399 (44%), Positives = 270/399 (68%), Gaps = 10/399 (2%)

Query  1    MPLTDTTIRNTKPVEKPIKLFDGGGLFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPEVT  60
            M+LT   +  ++P EK  KL D  GL+LLV  +G RYWRLKYR AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARRKRDEARERLAAGIDPGEAKKAEKRTVRLNAENSFEAVAREWHAKYAPTWSENHA  120
            LA AR KRD+AR  ++ G DPGE K+ EK T +++A N+F+A+A EWH   + +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  GRILRRLEVDAFPWISGKPIADLAPPDVLDALRRVEKRGALETAHRLHANISQVCRYAVA  180
              +L  L+ D FP ++ ++++D+ P ++L+ LRR+EKRG+LE  ++++   +Q+ RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAQRDVTADLRGALPPVQQEHMAALTDPKQVAELLRAIDGYQGTFPVMCALRLAPLLF  240
            TGRA  + +++L ++L++ +  H + L  + +++ +LR +  Y+G+     A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  QRPGELRAAEWAELDLDAGTWEIPSDRMKRTKQGKASGGAHIVPLSSQAVAVLGELHALT  300
             R  ELR+AEW+E+D+D + W IP  RMK  ++       H+VPLS Q   +L +L +++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRK-------HVVPLSRQVTDILQQLKTFS  292

Query  301  GNGRFLFPSVRTKDRPMSDNTINGALLRLGYNGDTMTGHGFRAMARTILDEVLGLPAAII  360
            G+ R++FP+    ++PMS+ +IN  L R+GY+G + TGHGFR    TIL+E  G+ +A I
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYNRTAHLPQRREMMQRWADYLDGL  399
            E QLAH  K+++  +YN++  +  RREMMQ+ ADY+D+L
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

267) EAE_09085 in NC_015663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1047),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 175/412 (43%), Positives = 267/412 (65%), Gaps = 25/412 (6%)

Query  1    MALTDAKIRAAKPDEKPYKLADSGNMFLLVHPNGSRYWRLRYRFLGKEKTLALGVYPEVS  60
            MALT  ++ +A+P EK YKL+D   ++LLV   G+RYWRL+YR+ GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEAREKRDTARKLIAEGTDPCEHKRIKKSVP--ETAQTFEGIARQWHKSNK-KWSDSHS  117
            L+EAR KRD ARK+I+EG DP E KR  K      +++TF+++A +WH+ +   WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  EKILKSLETHVFPFIGSRDITTLRTPDLLVPVkaaeakeiyeiaaRLQQRITAIMRYAAQ  177
              +L +L+ ++FP++G R +T +   ++L  ++  E +   E   +++Q    I RYA  
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIITYNPAVDMAGALTTVKRQHRPALALNRISELLERLDAYRGQPLTRLATKLTLLIFI  237
            +G  T NPA +++++L++ K  H P L  + ++ +L +L  Y+G P+TR+AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFKKAMWTIPPERKPIEGVKYSHRGSKMRTEHLVPLSTQALDILQQI  297
            R+ ELR A WSEIDF +A+WTIP  R             KMR  H+VPLS Q  DILQQ+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQQL  288

Query  298  HTISGEYELIFTGDHNPWKPMSENTVNNALRLMGYDTKIDVCGHGFRAMACSSLIESGL-  356
             T+SG+Y L+F G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFLDANEEKT  406
              W    +E Q++H ++N++R++Y H A ++D RR M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

268) c3556 in NC_004431


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1047),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRINSYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAERKPLPGVKFSHRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

269) SSON53_14055 in NC_016822


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1049),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 261/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIVPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G  P          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

270) intC in NC_007384


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1049),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 177/387 (46%), Positives = 261/387 (68%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT +Q+E+A+PKEK Y+L D  GLYL V  +G + W+L+Y+I GKEK L++G YP ++L 
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EARDKAWTARKDISVGIVPVka------kkassnnnsfsaIYKEWYEHKKQVWSVGYATE  115
            EAR K   ARK IS G  P          +  S  N+F A+  EW +HK   WS +YA  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   +D DI+P +G   + DI P+++LE++RR+E RG++E+  K R+ C ++FRYAI TG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA  NPA++L+ ++ + +  +FP L AD++P F + LA + GS V+ +AT++L  T+LRT
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
             ELRS  W ++DF+N + TI  S MK R+ HVVP+S QV ++L  L +++     +VF+G
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-LVFPG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            R D +KP+ E ++ +V+K+IGY+G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHA Y+D RREMMQW AD +D 
Sbjct  362  IRGTYNHALYIDGRREMMQWYADYIDS  388

271) A11S_1005 in NC_020812


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1049),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 173/400 (44%), Positives = 268/400 (67%), Gaps = 12/400 (3%)

Query  1    MPLSDVACRQAKPREKSYKMGDSGGLYLEITPKGSKLWRMKYRYGGKEKRLALGQYPEVS  60
            M+L+      A+P+EK YK++D  GLYL +   G++ WR+KYR +GKEK+LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARDGRDKARKLLAEHNDPSLAKQEKKRLAQ-ASAANTFEALALEWHEKNKGNWSPNH  119
            LA+AR  RD ARK+++E  DP+  K+ K +L+Q  SA+NTF+ALA EWH+ +  +WS + 
Sbjct  61   LAEARIKRDDARKIISEGGDPG-EKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  120  ASTVLRRLEQDLFPAIGNLPIKEITTPRLAIVIENIEKRGAYDIARRALQYSRAIFAYAQ  179
            A +VL  L++D+FP +G+ ++ +I    +  ++  IEKRG+ +  R+  QY   IF YA 
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  LRGKIDTNPADIKAKDFLAPIKQGHYAAMEAKDLPEFLSKL--YSNEARLFISTQLALEM  237
              G+   NPA   +  + AP K +H++ + A +LP FL KL  Y   +     T++A ++
Sbjct  180  ATGRATVNPASELTSTLAAP-KAAHFPHLRADELPVFLRKLAEYHGSP----VTRMATNL  234

Query  238  MLLTFVRTSELIKARWDEFDFEKRQWIIPAERMKMNRDHIVPLSKQVLRILEQLKPISEH  297
            +LLT +RT EL  A W E+DF++  W IP  RMKM R H+VPLS+QV  IL+QLK +S +
Sbjct  235  LLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQ  294

Query  298  REFLFPGQRNPKTHMSNGAILMALKRMGYHGIHTGHGFRALAMTTIMEELGYPHEVPDTQ  357
              ++FPG+ + +  MS+++I M LKR+GY+G  TGHGFR  +M+TI++E G+     + Q
Sbjct  295  YRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRH-TMSTILHEQGFNSAWIEMQ  353

Query  358  LAHAKGDSVRRAYDRTKFLAQRKKMMQEW-ADYIENISHK  396
            LAH   +S+R +Y+++ ++  R+ MMQ W ADYI+++S++
Sbjct  354  LAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQ  392

272) ECO103_3550 in NC_013353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 261/407 (65%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

273) ECO103_4929 in NC_013353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 261/407 (65%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

274) ECO111_5079 in NC_013364


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 261/407 (65%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

275) E2348C_3220 in NC_011601


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 261/407 (65%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

276) ECO26_4069 in NC_013361


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

277) ECO26_5300 in NC_013361


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 261/407 (65%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

278) Reut_A2365 in NC_007347


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  280 bits (1047),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 165/391 (43%), Positives = 267/391 (69%), Gaps = 3/391 (0%)

Query  7    PLTDTKIRNAKPRERSYKLFDGGGLYLEVMTDGRKLWRFKYVRPSGSESRLGFGVYPAVS  66
            +LT  ++  A+P+E+ YKL D  GLYL V T G + WR+KY R +G E +L++GVYP VS
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKLALGVYPDVS  60

Query  67   LAQARTQRETARGIVADGRDPGAVKQEERRAARIAAGNSFEAVARDWHNTQKSSWNDVYA  126
            LA+AR +R+ AR I+++G DPG  K+ E+ + +I+A N+F+A+A +WH+ +  SW++ YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  127  GKVLASLENDVFPVLGSTPIADIKAPAILDLLRKVEARGVRDTTKRILQRMRAVFQYGII  186
              VL +L++D+FP LG  +++DI +  +L++LR++E RG  +  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  187  YGLCDRNPAADIDSAAALKSESVQHQARVSPLELPQLLRDIDAYEGDAVTRLALQFMTLT  246
             G    NPA+++  +++L +    H +++ + ELP +LR +  Y+G +VTR+A +++ LT
Sbjct  181  TGRATVNPASEL--TSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  247  FVRTTEMIQARWVEIDEAKAEWRIPADRMKMRDPHVVPLSTQALAVLAELRAINGHRDLV  306
             +RT E+  A W EID  +A W IP  RMKMR  HVVPLS Q   +L +L++++G+  LV
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  307  FYSPRGKSGHISNNTMLYALYRMGYHSRMTGHGFRGLASTALNELGFRPDVIERQLAHVE  366
            F +  + +  +S+ ++   L R+GY++R TGHGFR   ST L+E GF +  IE QLAHV+
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  367  RNKVRAAYNHAQYLPERRQMMQSWADHVHAL  397
            +N +R++YNHA Y+  RR+MMQ  AD +++L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

279) EC042_3174 in NC_017626


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTRDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

280) EC042_4610 in NC_017626


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

281) int in NC_011748


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

282) EcolC_0747 in NC_010468


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 173/411 (43%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGLPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREQ  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  EQ
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

283) O3M_04655 in NC_018650


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

284) O3O_21040 in NC_018661


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

285) O3K_04610 in NC_018658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

286) UMNK88_3667 in NC_017641


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

287) EcolC_3878 in NC_010468


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLRTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVTLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRGMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

288) c5216 in NC_004431


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  279 bits (1043),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

289) Dd586_0394 in NC_013592


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 176/412 (43%), Positives = 273/412 (67%), Gaps = 25/412 (6%)

Query  1    MALTDIKVRIAKPSDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V  A+P +K+YKL+D  G+ LLV   G++YWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGTDPGDKKKSDKVEQ--SEALTFKEVAIEWHSTNK-KWSQEHS  117
            LA+AR +RD+ARK++++G DPG+KK+ +K+ Q  S + TF  +A EWH  +   WS+  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEQSGRLEVASRLQQRTTAIMRYAVQ  177
            + VL +L+ ++FP +GKR+++++   ++L  ++ +E+ G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALDLKHTPELLRRIDNYTGRPLTRLAVELTLLIFI  237
            +G    NPA E+++++A+++  H P L   + P +LR++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFDTALWTIPPEREPIDGVKHSHRGSKMRTPHLVPLSRQALATLKQI  297
            R+ ELR A WSEIDFD ALWTIP  R             KMR  H+VPLSRQ    L+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QQFSCDHELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            + FS +  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDANREKV  406
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+  E+V
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

290) ROD_50201 in NC_013716


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTIKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLNA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

291) ECP_2962 in NC_008253


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSRMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             +MR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

292) ECABU_c32560 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

293) int in NC_008563


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

294) i14_3273 in NC_017652


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

295) i02_3273 in NC_017651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

296) EcE24377A_3314 in NC_009801


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 259/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLIHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LL+   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

297) int in NC_011745


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSNELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

298) int in NC_017644


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

299) CE10_3417 in NC_017646


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

300) ECS88_4720 in NC_011742


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1041),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 261/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

301) intB in NC_020409


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 162/394 (42%), Positives = 270/394 (69%), Gaps = 8/394 (2%)

Query  1    MPLTDAKIKAAKPKSKEFTLNDGEGLSLVVNPKGRKWWRFRYQINGKRTMLSLGPYPYIS  60
            M+LT  ++ +A+PK K++ L+D  GL L+V+  G + WR++Y+I GK   L+LG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQEARLKRGDLKTLIAQGHDPSRKRKEDK--RKASASEAFEAIAREWFGKQVGSGWSERH  118
            L EAR+KR+D + +I++G DP+ K++ +K  +K SA+++F+A+A EW  ++ + +WSE  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESY  119

Query  119  AKTTMERMKKNIFPFIGDRPISELGVEDMLGVVQRCEKRGAVETARRIRQIMSQVFRYAV  178
            A++ +E + K+IFP++G R+++++   +ML +++R EKRG++E  R++RQ  +Q+FRYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  179  AAGRAERDPAADIKGALPPARKVKHHPSITDPKEIGPLLRAVDGFSGTLVVHCALRFAPL  238
            A+GRA  +PA+++ ++L+++ K  H P +  + E+  +LR +  + G+ V + A  +  L
Sbjct  180  ATGRATVNPASELTSTLAAP-KAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  239  VFVRPGELRNAEWGEVDLEGSEWRIPAEKMKGGSPHIVPLSTQAVEVLTELHPLTGPSGY  298
              +R  ELR+AEW+E+D++ + W IP  +MK    H+VPLS Q  ++L +L  ++G    
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  299  VFPSVRTSARPMSENTINVSLRRIGYDKTEMTGHGFRSMASTLLNEHGWHKDAIERQLAH  358
            VFP+     +PMSE +IN+ L+RIGYD    TGHGFR   ST+L+E+G +   IE QLAH
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  359  TPKDKVRASYNYAEHLPERKLMMQAW-ADYLDSL  391
              K+ +R++YN A  +  R+ MMQ W ADY+DSL
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

302) APECO1_3534 in NC_008563


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

303) ECH74115_4272 in NC_011353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

304) Z4313 in NC_002655


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

305) ECs3843 in NC_002695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

306) ECSP_3940 in NC_013008


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

307) intB in NC_013941


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

308) ECO55CA74_17295 in NC_017656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

309) CE10_4872 in NC_017646


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

310) int in NC_011742


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

311) CDCO157_3594 in NC_017906


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  278 bits (1040),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALVVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LAL VYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

312) ECED1_3430 in NC_011745


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  277 bits (1038),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 172/411 (42%), Positives = 260/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKHTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+  +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREQ  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  EQ
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

313) int in NC_011750


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 170/411 (42%), Positives = 262/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPISKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VP+S+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

314) GM18_2884 in NC_014973


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  277 bits (1036),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 167/396 (43%), Positives = 271/396 (69%), Gaps = 3/396 (0%)

Query  6    VPLSEQQVRKAKPQAKETKMFDGMGLFLLVTPSGGKLWRFKYQFGGKEKLLAFGSYPEIS  65
            ++L+ +QV  A+P+ K+ K+ D  GL+LLV  +G++ WR+KY+++GKEK LA+G YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  66   laeareklaaarkQVAAGIDPSGTKKALKAAQVAASESAFEIVAREWHTRFLNTWTAGHA  125
            LAEAR K   ARK ++ G DP+  K+  K +Q  ++ ++F+ +A EWH +   +W+ + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  126  GTILKRLERDVFPWVGNRPIGEIEPPEILAVLRRVESRGALETAHRIKTICGQVFRYAVA  185
             ++L  L++D+FP +G+R++ +I P E+L +LRR+E RG+LE  ++++  C Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  186  TGRATRDVAADLKGALPPAPEKHHASITDPKEVAQLLRAIQGYEGRFIVRCALRLSPLFF  245
            TGRAT + A++L ++L+++   H + +  + E++ +LR +  Y+G  + R A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  246  VRPGELRHAEWSEVDFEEALWTIPAERMKMKASHIVPLSSQALEILKELHSFTGRGRYLF  305
            +R  ELR AEWSE+DF++ALWTIP  RMKM+  H+VPLS Q  +IL++L +F+G+ R +F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  306  PCARSAARPMSNNAVNAALRRMGFDKDTMTGHGFRATARTILDELLNIRPDYIEHQLAHA  365
            P      +PMS+ ++N  L+R+G+D +  TGHGFR T  TIL+E   + +  IE QLAH 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHE-QGFNSAWIEMQLAHV  357

Query  366  VKDPNGRAYNRTAHLAERRKMMQTWADYLDGLVADA  401
             K++   +YN++  +  RR MMQ  ADY+D+L  + 
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

315) Tbd_0943 in NC_007404


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  277 bits (1035),  Expect = 8e-76, Method: Compositional matrix adjust.
 Identities = 162/396 (41%), Positives = 264/396 (67%), Gaps = 7/396 (1%)

Query  2    LTDMKVRQAKPGPNVQKLSDSQGLFLHISPSGGKWWRLAYRYTGKQKLLSLGTYPAVSLA  61
            LT  +V  A+P  +  KLSD +GL+L +  +G++ WRL YR +GK+K L+LG YP VSLA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   DARQRRDEAKKLLAHGVDPAENRKATKQARQDRASNSFEAVAREWHAKFSSTWSANHSDR  121
            +AR +RD+A+K++++G DP+E+++  K +++  A+N+F+A+A EWH   S +WS + +  
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  122  IIRRLENDIFPWLGDKPIADITPPTLLAALRRIEERGAVETAHRAMQNCGQVFRYSVATG  181
            ++  L++DIFP LG ++++DI P  +L  LRRIE RG++E  ++  Q C Q+FRY++ATG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  182  RAERDPSQDLKGALPPVAKSHFKSITDPVQIGVLLRNIDGYSGGPVVRSALRLAPLIFVR  241
            RA  +P+ +L ++L++   +HF  +    ++ V+LR++  Y G+PV R A  L  L  +R
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  242  PGELRHAEWAHFDLGAAEWRYTVSKTNT--EHIVPLSRQAISVLEELQPLTGHKRYVFPA  299
              ELR AEW+++D++ A W    S+ +    H+VPLSRQ   +L++L+ ++G+ R VFP+
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPG  301

Query  300  NRGEGRPMSENTVNAALRSLGYDKETLTGHGFRAMARTLLDEVLGFRPDIIEHQLAHAVR  359
              +  +PMSE ++N  L+ +GYD  + TGHGFR    T+L+E  GF +  IE QLAH  +
Sbjct  302  RCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDK  359

Query  360  DPLGRAYNRTTHLPERRKMMQGW-ADYLDELKAGAT  394
            +++  +YN++  +  RR MMQ W ADY+D L    +
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

316) int in NC_011750


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  277 bits (1035),  Expect = 9e-76, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRISSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWRADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

317) EAM_3037 in NC_013971


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 268/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G+RYWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQ--EEARTFEELAVEWHATNK-KWSEEHS  117
            LA+AR +RD+ARK+++++ DPG+KK+++K+ Q    + TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTCLAVELTLLVFI  237
            +G    NPA E+ +++A+++  H P L     P +L+++  Y G P+T +A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWMIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALAILEQI  297
            R+ ELR A WSEIDF+ ++W IP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQIEVCGHGFRTMACSSLIESGL-  356
            KTFSG+  L+F G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVKRQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +  Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

318) intB in NC_013961


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  276 bits (1033),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 268/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G+RYWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQ--EEARTFEELAVEWHATNK-KWSEEHS  117
            LA+AR +RD+ARK+++++ DPG+KK+++K+ Q    + TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTCLAVELTLLVFI  237
            +G    NPA E+ +++A+++  H P L     P +L+++  Y G P+T +A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWMIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALAILEQI  297
            R+ ELR A WSEIDF+ ++W IP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQIEVCGHGFRTMACSSLIESGL-  356
            KTFSG+  L+F G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVKRQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +  Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

319) ECUMN_3322 in NC_011751


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 171/411 (42%), Positives = 260/411 (64%), Gaps = 25/411 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAELEPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR A WSEID+DNA+WTIP                KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPES------------RMKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREE  405
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

320) ECA2879 in NC_004547


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  276 bits (1032),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 173/412 (42%), Positives = 260/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDIKVRSAKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALT  +V +A+P EK YKL+D  G++LLV T G++YWRL+YR  GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQKRDEARKLISAGVDPNEHKKAVK-TQQQDDEQTFEAVARAWHTDNK-KWSESHA  118
            L+EAR KRD+ARK+IS G DP E K+  K TQ+    +TF+A+A  WH ++   WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERILKSLSDNIFPAIGGTHVANLKTRDLLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
              +L +L  +IFP +G   V+++   ++L  ++ +E+ G LE  ++++Q    I  YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHRPALELDRLPELLGRIDGYKGREFTKWVINLSLLIFI  238
             G    NPA ++++++ + K  H P L  D LP +L ++  Y G   T+   NL LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWPEIDFERSLWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILKKI  298
            R+ ELR A W+EIDF+ +LWTIP  R             KM+  H+VPLSRQ  +IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            +  SG+  LVF G     KP+SE+++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADFLDANRERA  407
              W    +E Q++H ++N++R++Y H A  +D RR M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

321) Bcen_1752 in NC_008060


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 174/396 (44%), Positives = 265/396 (67%), Gaps = 12/396 (3%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT  60
            M+LT  QV  A++    YKL+D  G++LLV+  GA+YWRL YR+ GK+K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdarraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KRD+AR  I+ G DPGE K+  + +  I+A+N+F+A+A EW + +  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
              VL++L+ D+FP +G R++++I + +ML I+R +E RG  E  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR + NPA+++ +      +P   H ++++A E+P ++R +  Y+G  VTR+A  L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T +RT E+  AEWSE+D   A W +P  RMKMR  H+VPLSRQ  D+L QL++++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQM  356
            VF    GR +I    S+ ++   L R+GY +R TGHGFR   +T L+E GF    +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERRRMMQAW-GDHLDQL  391
            AH ++N + ++Y HA Y+  RR MMQ W +D +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

322) Bcen2424_2364 in NC_008542


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  275 bits (1029),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 174/396 (44%), Positives = 265/396 (67%), Gaps = 12/396 (3%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT  60
            M+LT  QV  A++    YKL+D  G++LLV+  GA+YWRL YR+ GK+K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdarraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KRD+AR  I+ G DPGE K+  + +  I+A+N+F+A+A EW + +  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
              VL++L+ D+FP +G R++++I + +ML I+R +E RG  E  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR + NPA+++ +      +P   H ++++A E+P ++R +  Y+G  VTR+A  L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T +RT E+  AEWSE+D   A W +P  RMKMR  H+VPLSRQ  D+L QL++++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQM  356
            VF    GR +I    S+ ++   L R+GY +R TGHGFR   +T L+E GF    +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERRRMMQAW-GDHLDQL  391
            AH ++N + ++Y HA Y+  RR MMQ W +D +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

323) Dd586_3778 in NC_013592


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  275 bits (1027),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 165/393 (42%), Positives = 266/393 (68%), Gaps = 6/393 (1%)

Query  1    MPLTDAKIRSTKPANKPIKLADGGGLYLDVRPSGSKLWRYRYRIAGKENVFALGEYPTLS  60
            M+LT  ++ +++P +K  KL+D  GLYL V+ +G++ WR +YRIAGKE+ +ALG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARAEHDKARALVKQAIHPAHQRQLERMASYSANANTFEAVAREWIDKKSPDWTPYYL  120
            LAEAR  +D AR ++ ++ +P+++++ E+++   + +NTF+A+A EW + KS  W+  Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RQVERFLAADVFPAIGKLPIKSVKAAHLLEIIKRIEGRGAETVALLIRQWSSAIFRYAVA  180
            R V   L  D+FP +GK ++  + + ++LEI++RIE RG+      +RQ  + IFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TLRADSDPAAALKGAIRRPKVEHHKPLSRTEIEDFMQALNRYGGYRTTVIALKLMLLTFV  240
            T RA  +PA+ L +++  PK  H   L   E+  F++ L  Y G   T +A +L+LLT +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  241  RTVELRKAEWREFDLDGAEWRIPAGRMKMREEHIVPLSTQAIVLLRELQTYTGGRGWLFP  300
            RT+ELR AEW E+D+D A W IP +RMKMR  H+VPLS Q   +L++L+T++G    +FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  301  NYRNPQDCMTATTLNRALERMGFNGKDSIGFSAHGFRATASTILNEMGYRPDVIERQLAH  360
               + +  M+ +++N  L R+G++G+     ++HGFR T STIL+E G+ +  IE QLAH
Sbjct  301  GRCDINKPMSEASINMVLKRIGYDGRA----TGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  361  TERNKVRASYNRAVYLDERRKMMQAW-ADFVNG  392
             ++N +R++YN+A+Y+D RR MMQ W AD++++
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQ-WYADYIDS  388

324) CFSAN001992_11535 in NC_020307


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  274 bits (1026),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 267/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARSRRDEARKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLYRIDHYSGRPLTRFAVELMLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L ++ +Y G P+TR A +L+LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELR A W+E+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

325) EcolC_1237 in NC_010468


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  274 bits (1024),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 173/391 (45%), Positives = 268/391 (69%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSQTPGLFLLVHPNGSKYWRFRYWIDKKERLQAVGVYPLI  64
            +LTA+ +++A+P++K YKL+D +  GL+LLV   G++YWR++Y+I  KE+  A+GVYP +
Sbjct  2    ALTARQVETARPKEKDYKLSDER--GLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDV  59

Query  65   SLKEARKRATESRLLIAQGIDPMEEARKEKAIDALNMAASFKTVAEDWLATRVSGWSESY  124
            SL EAR +  ++R +I++G DP E  RKEK  + ++ + +F ++A +W   +  +WSESY
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  125  TKQVRSALEKDVYPVLGKRSIVDITARDVLSLLQKKERTAP-EQARKLRQRIGEIFKFAV  183
            ++ V  AL+KD++P LGKRS+ DI + ++L +L++ E+ ++ E+ RK+RQ   +IF++A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  184  ITELVNRNPVADLDTALKARRPGHNAWIPISEIPAFYKAL-ERAGSVQIQTAIRLLILTA  242
             T     NP ++L ++L A +++H + +   E+P F + L E  GS   + A  LL+LT+
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  243  LRTAELRLMRWEWVDLESATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            LRT ELR   W  +D+++A  T+P   MK RR HVVPLSRQ  ++LQ+  T SG   +VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  303  PGRF-MDKPLSASAILKALERIGYKSIATGHGWRTTFSTSLNESGRYNPDWIEIQLAHVP  361
            PGR  ++KP+S ++I   L RIGY + ATGHG R T ST L+E G +N+ WIE+QLAHV 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GVRGVYNQAAYLKQRRAMMQNYSDAIDQI  391
            K ++RG YN+A Y+  RR MMQ Y+D ID +
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

326) Bamb_2421 in NC_008390


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  274 bits (1024),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 174/396 (44%), Positives = 265/396 (67%), Gaps = 12/396 (3%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  60
            M+LT  QV  A++    YKL+D  G++LLV+  GA+YWRL YR+ GK+K LALGVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdakraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KRD+AR  I+ G DPGE K+  K +  I+A+N+F+A+A EW + +  +WS++YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVLNSLEVDVFPKIGARPMAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
              VL++L+ D+FP +G R++++I + +ML I+R +E RG  E  +++ Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR + NPA+++ +      +P   H ++++A E+P ++R +  Y+G  VTR+A  L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T +RT E+  AEWSE+D   A W +P  RMKMR  H+VPLSRQ  D+L QL++++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYTLYHMGYKSRMTGHGFRGPTATALRELGFGRDVVERQM  356
            VF    GR +I    S+ ++   L ++GY +R TGHGFR   +T L+E GF    +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERRRMMQVW-GDHLDRL  391
            AH ++N + ++Y HA Y+  RR MMQ W +D +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

327) S70_13465 in NC_017731


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  274 bits (1024),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 175/412 (43%), Positives = 262/412 (64%), Gaps = 25/412 (6%)

Query  1    MALTDAKIRAAKPDVKSYKLTDGAGLHLLVHTNGSKYWRLRYRHLGKEKTLALGLYPDVS  60
            MALT  ++ +A+P  K YKL+D  GL LLV T G++YWRL+YR  GKEK LALG+YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARLKRDEARKLIADGIDPCEQKRVAKAAS--DANLSFETIARQWHASNK-KWSESHS  117
            L+EAR+KRD+ARK+I++G DP E+KR  K +    A  +F+++A +WH  +   WSES +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  EKVLKSLESHVFPYIGLRDITTLKTPDLLIPIRAAESKEIYEIAARLQQRIAAVMRYAVQ  177
              VL +L+ ++FPY+G R +T +   ++L  +R  E +   E   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIGYNPAIDTAGAVTTVQRQHRPALNLDRLPELIARIDAYKGQPVTRLAVMLNLLVFI  237
            +G    NPA + ++++++ +  H P L  D LP ++ ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDFDKALWTIPAERKPIPGVKFSHRGAKMRTPHLVPLSHQAITILKEI  297
            R+ ELR A WSEIDFD+ALWTIP  R             KMR  H+VPLS+Q   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQQL  288

Query  298  WAWTGEHELILTGAHNPFKPMSENTVNKALRVMGYDTKTEICGHGFRTMACSSLVESGL-  356
             + +G+  L++ G  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDQRRLMVQWWADYLDANREQT  406
              W    +E Q++H ++NS+R++Y H A  ID RR M+QW ADY+D+  EQ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

328) Ppro_2300 in NC_008609


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  273 bits (1021),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 165/392 (43%), Positives = 264/392 (68%), Gaps = 5/392 (1%)

Query  7    PLSDLQVRNAKPKEKQVTLFDGGGLYLLITPTGGKLWRLKYSLFGKEKLLALGTYPEISL  66
            +L+  QV  A+PKEK+  L D  GLYLL+  TG++ WRLKY + GKEK LALG YP++SL
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  67   ADARQRREDARKQVANGIDPGEVKKAQKVSSGEGDENSFEVIAREWHGKFLLNKSESYRD  126
            A+AR +R+DARK +++G DPGE K+ +K++   +  N+F+ +A EWH    L+ SESY  
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  127  KMLSNFERDVFPWIGRVAVKNLKAPELLSALRRIEGRGALETAHRTRSACSQVLRYAVAT  186
             +L  +++D+FP +G+ +V ++ + E+L  LRRIE RG+LE  ++ R  C+Q++RYA+AT
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  187  GRAERDCASDLIGALPPYKKGHRAALTDPKEVAPLLRAIDDYQGTFPVKCALKLAPLLFV  246
            GRA  + AS+L ++L++ K +H + L  + E++ +LR + +Y+G+   + A +L  L  +
Sbjct  182  GRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  247  RPGELRKAEWSEVDFKATEWRIPGDKMKMKNDHIVPLASQAVEILKELYPLTGHSKFLFP  306
            R  ELR AEWSE+DF  + W IP  +MKM+  H+VPL+ Q  +IL++L  ++G+ +++FP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  307  SPRSPLRPMSDNAILSALRRMGFEKDEMSGHGFRAMARTILDEVLHVRPDFIEHQLAHAV  366
            +     +PMS+ +I   L+R+G++ +  +GHGFR    TIL+E     +  IE QLAH  
Sbjct  301  GRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  367  RDPNGRAYNRTAHLAERKKMMQAW-ADYLDDL  397
            +++   +YN++  +  R+ MMQ W ADY+D L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

329) S70_06120 in NC_017731


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  273 bits (1023),  Expect = 8e-75, Method: Compositional matrix adjust.
 Identities = 174/412 (43%), Positives = 262/412 (64%), Gaps = 25/412 (6%)

Query  1    MALTDAKIRAAKPDVKSYKLTDGAGLHLLVHSNGSKYWRLRYRHLGKEKTLALGLYPDVS  60
            MALT  ++ +A+P  K YKL+D  GL LLV + G++YWRL+YR  GKEK LALG+YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARLKRDEARKLIADGIDPCEQKRVAKAAS--DANLSFETIARQWHASNK-KWSESHS  117
            L+EAR+KRD+ARK+I++G DP E+KR  K +    A  +F+++A +WH  +   WSES +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  EKVLKSLESHVFPYIGLRDITTLKTPDLLIPIRAAESKEIYEIAARLQQRIAAVMRYAVQ  177
              VL +L+ ++FPY+G R +T +   ++L  +R  E +   E   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIGYNPAIDTAGAVTTVQRQHRPALNLDRLPELITRIDAYKGQPVTRLAVMLNLLVFI  237
            +G    NPA + ++++++ +  H P L  D LP ++ ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDFDKALWTIPAQRKPIPGVKFSHRGAKMRTPHLVPLSHQAITILKEI  297
            R+ ELR A WSEIDFD+ALWTIP  R             KMR  H+VPLS+Q   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQQL  288

Query  298  WAWTGEHELILTGAHNPFKPMSENTVNKALRVMGYDTKTEICGHGFRTMACSSLVESGL-  356
             + +G+  L++ G  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDQRRLMVQWWADYLDANREQT  406
              W    +E Q++H ++NS+R++Y H A  ID RR M+QW ADY+D+  EQ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

330) intB in NC_016514


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 270/407 (67%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrddarKLLANSIDPGDKKKNDKVEQ--EEARTFEQLAIEWHATNK-KWTEEHS  117
            LA+AR +RDDARK+++++ DPG+KK+++K+ Q    + TF+ LA EWH  +   W+E  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMAGAVASSNRQHRPALELRRTPELLQRIDSYTGRPLTRLAIELTLLVFI  237
            +G    NPA E+++++A+++  H P L     P +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGIKHSQRGSKMHTPHLVPLSRQALAILKQV  297
            R+ ELR A WSEIDF+ ++WTIP  R             KM+  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  HKLSGDRDFVFIGDHDHRKPMSENTVNKALRVMGYDTKIEVCGHGFRTMACSSLIESGL-  356
              +SG+  +VF G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A  +D RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

331) KO11_23100 in NC_017660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHE-QEVITFEVVAREWHASNQ-KWSASHS  118
            L +AR +RD+ARK++++G DP+E+K+  K+ +      TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I+R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELR A WSE+DFD A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

332) EKO11_4021 in NC_016902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHE-QEVITFEVVAREWHASNQ-KWSASHS  118
            L +AR +RD+ARK++++G DP+E+K+  K+ +      TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I+R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELR A WSE+DFD A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

333) LY180_22530 in NC_022364


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHE-QEVITFEVVAREWHASNQ-KWSASHS  118
            L +AR +RD+ARK++++G DP+E+K+  K+ +      TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I+R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELR A WSE+DFD A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

334) ECW_m4652 in NC_017635


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHE-QEVITFEVVAREWHASNQ-KWSASHS  118
            L +AR +RD+ARK++++G DP+E+K+  K+ +      TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I+R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELR A WSE+DFD A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

335) WFL_22655 in NC_017664


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHE-QEVITFEVVAREWHASNQ-KWSASHS  118
            L +AR +RD+ARK++++G DP+E+K+  K+ +      TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I+R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELR A WSE+DFD A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

336) ECO111_3718 in NC_013364


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 257/407 (64%), Gaps = 27/407 (6%)

Query  1    MALTDAKIRAAKPSDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKR--ARKLISEGIDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  115
            L+EAR KR  ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  116  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  175
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  176  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  235
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  236  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  295
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  296  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  354
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  355  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  399
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

337) Despr_0274 in NC_014972


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  271 bits (1014),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 172/398 (44%), Positives = 273/398 (69%), Gaps = 15/398 (3%)

Query  2    LVDTAIKNAKPKEQPYKLTDGKGLYLLVKSTG-KYFRFNYRFQDKQKTLALGVYPDVSla  60
            L    +  A+PKE+ YKL+D +GLYLLVK+TG +Y R++YR+ +K+K LALGVYPDVSLA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  61   garerlaearkliaDGIDPGEQRKMDK--EAATNLNSVEAVAREWFLKNKHTWTDNHARD  118
             AR +  +ARK+I++G DPGE+++ +K  +  +  N+ +A+A EW   +  +W+++ AR 
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  119  IITRLEANVFPWLGRTPIADVTAPMLLAVLRRIEDRGAIETAHRIKQMCGQVFRYAVATG  178
            ++  L+ ++FP LG+ +++D+ +  +L +LRRIE RG++E  ++++Q C Q+FRYA+ATG
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  179  RAERDPSADLRGALPPPPSKSMATITDPKGVSALLRAIRGYKGEIITRCALRLAPLTFVR  238
            RA  +P+++L ++L++P +   + +  +  ++ +LR +  Y G  +TR A  L  LT +R
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTGLR  241

Query  239  PGELRHAEWADIDLDRAEWKIPPEKRKLKKALKAIPQNFHFVPLSRQALAVLRELQPLTG  298
              ELR AEW++ID+D A W IP  + K+++         H VPLSRQ   +L++L+ ++G
Sbjct  242  TIELRSAEWSEIDFDNALWTIPESRMKMRRK--------HVVPLSRQVTDILQQLKTFSG  293

Query  299  EGRYVFPSLRTGERPMSENTVNAALRRMGYAKDEMTGHGFRAMASTLLHEQGWPSDVIER  358
            + R VFP+    ++PMSE ++N  L+R+GY  +  TGHGFR   ST+LHEQG  S  IE 
Sbjct  294  QYRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEM  352

Query  359  QLAHKERNSVKAAYNYAQHIPERRKMMQAW-ADYLDAL  395
            QLAH ++NS++++YN A  I  RR MMQ W ADY+D+L
Sbjct  353  QLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

338) ECO103_5061 in NC_013353


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  271 bits (1012),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 270/407 (67%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR++GK+K LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrddarKLLANGIDPGDKKKNDKIEQ--EEARTFEQLAIEWHATNK-KWSEEHS  117
            LA+AR +RDDARK++++G DPG+KK+++K+ Q    + TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIADLKTRDLLAPIKAVELSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++D+   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMVGAVASNNRQHRPALQLKLIPELLRRIDSYTGRPLTRLAVELTLLVFI  237
            +G    NPA E+ +++A+ +  H P L+   +P +LR++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGVKHSQRGSKMRTPHLVPLSHQALAILKDV  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  YKLSGDRDFVFIGDHDHRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +SG+  +VF G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERSSVRAAYIHKAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H++++S+R++Y H A  +D RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

339) intA_4 in NC_022370


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  271 bits (1012),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 171/408 (42%), Positives = 261/408 (64%), Gaps = 27/408 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PKEK YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKQAHAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   +++    +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRLLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   +  +   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKVRHYPALPSSRLPEFLSRLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ K  H+P L +  LP FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWNEFDFDKALWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMNLLG  297
             +R+ ELR A W+E+DFD+ALW +P  R            MKM+  H+VPLSRQ  ++L 
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDRKLLFPGDHDATKVMSENTVNNALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+ +L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWADYID  402
            +   W    IE QL+H ++N++R++Y H+   +D RR MMQW ADYID
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYID  387

340) Dda3937_03406 in NC_014500


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  270 bits (1008),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 177/406 (44%), Positives = 265/406 (66%), Gaps = 25/406 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARKLREEARTILSAGDDPGVKKQHDKQAKK--NGNTFEAIARQWVA-ANIRWSEAHA  117
            LA+AR  R++AR I+S G+DPG KK+ +K ++K    NTF+A+A +W    ++ WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
              VL +L+ ++FP +G+  VTD+   ++L  LR  EK+G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  EGLIASNPANDLCGAITPPPKNHYPAlplerlpellerIEGYSGRLLTRLAVQLNLLIFI  237
             G  + NPA++L +++++P   H+P L  + LP +L ++  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W+EID+DNA+WT+P  R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNGDLLFPGDHDARKPMSENTINKALRTMGYDTQADICGHGFRTIACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +A   GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLD  400
              W    +E Q++H ++N +R++Y H A  +D R +MMQW +DY+D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

341) SEEB0189_19950 in NC_021844


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 263/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHESNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH+ +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H+   +D RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

342) Dd586_0881 in NC_013592


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  270 bits (1011),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 265/407 (66%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTAS  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP  S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARKLREEARAVLCAGADPGVKKQQDKQARK--NGNTFETVSRQWVA-ANIRWTEAHA  117
            LA AR  R++AR ++  G+DPG KK+++K ++K    NTF++++ +W    ++ W+E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKVLRSLELHVFPLIGKTPLTDLKTADLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
              VL +L+ ++FP +GK ++TD+   ++L  LR  EK+G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  EGLIASNPANDLCGAITTPPKNHYPAlplerlpellerIEGYSGRLLTRLAVQLNLLIFI  237
             G  + NPA++L +++++P   H+P L  + LP +L ++  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W+EID+DNA+WT+P  R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNGDLLFPGDHDARKPMSENTINKALRTMGYDTQADICGHGFRTIACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +A   GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A  +D R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

343) EC042_4741 in NC_017626


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  270 bits (1011),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 163/406 (41%), Positives = 263/406 (65%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRSAKPQEKEYTLADGDGMFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETS  60
            MALT  +V +A+P+EK+Y L+D  G++LL+   G++YWR+++R++GK+  +A+GVYP+ S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREEARKLVAAGIDPREHKRAVK-EEQTKEAITFESVAREWHAVNK-KWTEEHS  118
            LA+AR KR++ARK+++ G DP E KR  K  ++   + TF+++A EWH  +   W+E  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  RRVLKSLEDNLFPAIGKRSIDSFSTRDLLVPIKVVEATGRLEVASRLQQRTNAIMRCAVQ  178
            R VL +L+ ++FP +GKRS+  +   ++L  ++ +E  G LE   +++Q  N I R A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRVHRPALELKRLPELLQRIDSYSGRPLTRLAVELTLLIFI  238
            +G    NPA E+++++A+++  H P L    LP +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWPEIDFERAMWTIPAEREAIEGVKHSERGSKMRTPHLVPLSRQALAILKQV  298
            R+ ELR A W+EIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  HKLSGERDFVFVGDHNPCKPMSENTVNKALRVMGYDTKIEVCGHGFRTMACSSLIESGL-  357
              +SG+  +VF G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  358  --WSRNAVERQMSHMERNSVRAAYIHKAQHLDERKMMLQWWADFLD  401
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

344) Ser39006_0951 in NC_022268


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  270 bits (1011),  Expect = 8e-74, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 264/407 (65%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMFLLVHPNGSKYWRFRFRFGGKQHLMAFGVYPEVS  60
            MALT  +V +A+P EK+Y L D  G++LLV   G++YWR+++R++GK+  +A+GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREAARKLVAAGIDPREQKRAVQ-EEQAKAVFTFEFVAREWHATNK-KWSEEHS  118
            LA+AR KR+ ARK+++ G DP E+KR  +  ++  A  TF+ +A EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  RRVLKSLEDNLFSAIGKRNVAELKTRDLLAPIKTVEQSGRLEVASRLQQRTTAIMRYAVQ  178
            R VL +L+ ++F+ +GKR+V+++   ++L  ++ +E+ G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTRLSVELTLLIFI  238
            +G    NPA E+++++A+++  H P L     P +L+++  Y G P+TR++ +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIEGVKHSHRGSKMRTPHLVPLSRQALVILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  QQVSGDHELIFIGDHNPRKPMSENTVNNALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            +  SG+  L+F G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A  +D RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

345) Mpe_A1087 in NC_008825


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  269 bits (1007),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 171/390 (44%), Positives = 256/390 (66%), Gaps = 5/390 (1%)

Query  1    MKLTDLKLRTLTQSGKHF---DGGGLYLEVTAAGGRYWRMKYRHGGKEKRLAFGVYPEVT  57
            M LT  ++ T     K++   D  GLYL V ++G+RYWR+KYR +GKEK+LA+GVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  58   LraardrrdearrVLDQGGDPGELRKaakaqaaheaSNTFEAVARDWLTHQADSWEAVTL  117
            L  AR +RD+AR+++ +GGDPGE ++  K      A+NTF+A+A +W  H++ SW     
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ARIKAAFKADVFPQLGARPMAQIKPREVATVVKAIEARGAGDMAARVLQRIRAVFRFAVV  177
              +  A+  D+FP LG R++++I P E+  +++ IE RG+ +   +V Q    +FR+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  HERIDSNPMLDLQPGELLKPRQVRHRAALADRDLPVFLEKLAAYDGDVSTSAALRLLMLT  237
              R   NP  +L +   L + +  H + L   +LPVFL KLA Y+G   T  A  LL+LT
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  AVRPGELRGARWDEIDMDAAEWRIPAERMKMRSPHVVPLSRQALDVLQLMQPLSGERELV  297
            ++R  ELR+A W EID D A W IP  RMKMR  HVVPLSRQ  D+LQ ++ +SG+  LV
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  298  FPSPYYPGKPLSENTLNSALARMGYKGLATAHGFRALFSTVANESGHSPDVIERQLAHVE  357
            FP+     KP+SE ++N  L R+GY G AT+HGFR   ST+ +E G ++  IE QLAHV+
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  358  RNAVRAAYHRSTYLKDRAQLMQWWADYLDG  387
            +N++R++Y+++ Y+ +R ++MQW ADY+D+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDS  388

346) NH8B_1979 in NC_016002


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  269 bits (1006),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 169/389 (44%), Positives = 259/389 (67%), Gaps = 3/389 (0%)

Query  1    MPLSDVKIRTSKPLDKPYKLQDGKGLYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYPDV  60
            M+L+  ++ T++P +K YKL D +GLYL ++ TGA++WR +Y+ +  K+   ++G YPDV
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIA-GKEKKLALGVYPDV  59

Query  61   SraearaerervrllvKEGKNPTAEKKLDKLRSQKETATTLAVVAEEWKVVNWPHWSETY  120
            S AEAR  R+  R ++ EG +P   K+ +KL  +  ++ T+  +A EW   +   WSE+Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  121  RKQVEKHLQRDLLDEYGELPIREVTSAQLLAAIRKIDERGAPSIARLVRQWAGSIFRHAI  180
             + V   L++D++   G  ++ ++ + ++L  +R+I+ RG+    R VRQ    IFR AI
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  181  ATLRADSDPTYPLRGALRMPPTRHNAHLSADELPGFMKALDAYKGFGLTRLAVNLQMLTL  240
            AT RA  +P+  L ++L  P + H +HL ADELP F++ L  Y G  +TR+A NL +LT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRTQELRLAEWTEFDLDAAEWRIPAEKMKMRDPHIVPLPKQAVAIMRELEPLTGRRRWVF  300
            +RT ELR AEW+E+D+D A W IP  +MKMR  H+VPL++Q   I+++L  ++G+ R VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  301  PNIRNHDTGMTNTTILRVIEILGYKGRATGHGFRATASTILHEQGWNSDIIERQLAHLER  360
            P   + +  M++++I  V+  +GY GRATGHGFR T STILHEQG NS  IE QLAH+++
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  361  NKVKAAYNHAGYLKERREMLQAW-ADYLD  388
            N ++++YNHA Y+  RREM+Q W ADY+D
Sbjct  360  NSIRGTYNHALYIDGRREMMQ-WYADYID  387

347) Entcl_3878 in NC_014618


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  269 bits (1006),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 168/406 (42%), Positives = 261/406 (65%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRSAKPQEKEYTLVDGDGMFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETS  60
            MALT  +V +A+P+EK+Y L D  G++LL+   G++YWR+++R++GK+  +A+GVYP+ S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQKREEARKLVAAGIDPREHKRAVK-EQQAKENITFESVAREWHAANK-KWSEEHS  118
            LA+AR KR++ARK+++ G DP E KR  K  Q+     TF+++A EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  RRVLKSLEDNLFPAIGKRSIDSFSTRDLLVPIKVVEATGRLEVASRLQQRTNAIMRYAVQ  178
            R VL +L+ ++FP +GKRS+  +   ++L  ++ +E  G LE   +++Q  N I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRVHRPALELKRLPELLHRIDSYTGRPLTRLAVELTLLIFI  238
            +G    NPA E+++++A+++  H P L    LP +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFERAMWTIPAEREAIEDVKHSQRGSKMRTPHLVPLSRQALAILKQV  298
            R+ ELR A WSEIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  HKLSGERDFVFIGDHNPLKPMSENTVNKALRVMGYDTKVDVCGHGFRAMACSSLIESGL-  357
              +SG+  +VF G  +  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADLLD  401
              W    +E Q++H+++NS+R++Y H A  +D RR M+QW AD +D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

348) ENC_43890 in NC_021046


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  269 bits (1005),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 166/408 (41%), Positives = 261/408 (64%), Gaps = 27/408 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGEYTFETIGREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S+  TF++++ EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             +R+ ELR A W E+DFD++LW +P  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKKLLFPGDHDTTKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+ +L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHTERNNVRAAYIHTSEHLDERRLMVQWWADYLD  402
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYID  387

349) int in NC_011748


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

350) O3M_22875 in NC_018650


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

351) O3K_22970 in NC_018658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

352) SFxv_3245 in NC_017328


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

353) S4822 in NC_004741


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

354) SF2964 in NC_004337


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 260/407 (64%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +    +F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L ++  Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR A WSEID+DN++WTIP  R             KMR  H+VPLS+QV  IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +T +G+  L+F G  D  KP+SE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A  ++ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

355) SSPA3984 in NC_011147


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHESNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH+ +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  ++ ++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H+   +D RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

356) int in NC_006511


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHESNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH+ +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  ++ ++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H+   +D RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

357) Cpha266_1627 in NC_008639


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1002),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 173/399 (44%), Positives = 269/399 (68%), Gaps = 9/399 (2%)

Query  6    LPLSDAQVSKAKPAEKDYKLSDGGGLHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEIS  65
            ++L+  QV  A+P EKDYKLSD  GL LLV T+G++ WR++YR+ GK+K LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  66   LANARKRREEARTLLANEQDPSeakkaakkaealkDASSFELVAREWFGKNDPVWSPGHA  125
            LA+AR +R++AR ++++  DP+E K+  K ++ +  +++F+ +A EW   +   WS + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  126  LTVMCRLEKDVFPAIGSKPVSEITASDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVA  185
             +V+  L+KD+FP +G ++V++I + ++  +L +IE RG++E   +++  C Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  186  TGRLEHDPSAALKSREIFRKREIRHHAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPL  245
            TGR   +P++ L S     K     H +   + EL+ +L  + EY+G+ V + A +L  L
Sbjct  181  TGRATVNPASELTSTLAAPKAA---HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  246  LFVRPGELQNMEWSDIDFEEALWSIPAERMKMRQPHLVPLSRQSLSILQGLHPATGHGRY  305
              +R  EL++ EWS+IDF++ALW+IP  RMKMR+ H+VPLSRQ   ILQ L   +G+ R 
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  306  VFTGRG--SRPMSNNSINAALRYLGYDSDTVTGHGFRATARTILDEVLGFRVDLIEHQLA  363
            VF GR   ++PMS+ SIN  L+ +GYD+ + TGHGFR T  TIL+E  GF    IE QLA
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  364  HAVRDPNGRAYNRTSFLDDRRQMMQAW-ADYLYSLKAGV  401
            H  +++   +YN++ ++D+RR+MMQ W ADY+ SL   V
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQV  393

358) RSc1871 in NC_003295


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1001),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 170/394 (44%), Positives = 273/394 (70%), Gaps = 8/394 (2%)

Query  1    MALTDTAIRNAKPADKPIKLFDGGGLFLHVTPAGQRYWRLKYRFAGKEKLLAIGVYPEIG  60
            MALT   +  A+P +K  KL D  GL+L V  +G RYWRLKYR+AGKEK LA+GVYP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHAKYAPGWSESNA  120
            L EAR +R++A+++++EG DP+  ++  K++    A+N+F+A+A EWH   + +WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KKVLARLENDVFPWLGGRPIAEVKAPELLGVARRVESRGALDTAHRVLQTCGQIFRYAVA  180
            + VL  L++D+FP LG R+++++ + E+L + RR+E RG+L+  ++V Q C QIFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPKEVAGLLRMFDGFTGTFIVKCALLLAPMVF  240
            TGRA  +P+++L ++L+++K+ H+ +   + E++ +LR +  + G+ + + A  L  +  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRPGELRAAEWADIDLDAAEWRFVSSKRDV--AHIVPLSTQAVAILRDLHALTGHGRYLF  298
            +R  ELR+AEW++ID+D A W +  S+  +   H+VPLS Q   IL++L +++G+ R +F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PGARDKAKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQLAH  358
            PG  D  KPMSEA+IN  LKR+G D +   TGHG R    TIL+E  GF++  IE+QLAH
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  RKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDEL  391
              K++  ++Y++  ++  R++MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

359) SbBS512_E4814 in NC_010658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1001),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 261/407 (65%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEEHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGSHNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G ++++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLQKIDEYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+ +  H P L    +P +L+K+ EY G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGAKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPSKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D +KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

360) PSTAB_3439 in NC_015740


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  268 bits (1001),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 160/395 (41%), Positives = 252/395 (64%), Gaps = 6/395 (1%)

Query  10   PLADTVLASLEPEPKEYRELDGDGLYFRVKPDGSKSWQLRYKKADGKWSWLGLGGYGTGD  69
            +L+   + +  P  K+Y+  D  GLY+ VK  G++ W+L+Y+   GK   L+LG Y    
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR-IAGKEKKLALGVYP---  57

Query  70   HQLTGEQARRKVRELRDNTAKGGSVlatkqaqkaaeleaannTFERLAREWYSAKCKTWT  129
             +++  +AR K  + R   + GG     K+ +K ++  +A NTF+ LA EW   K  +W+
Sbjct  58   -DVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWS  116

Query  130  EGTAVRTIGALEKHVFPVFGKRPFTSILPMEWMNFLRAMEETGIVEQTSRVRGMCREVYD  189
            E+ A   + AL+K++FP +GKR+ T ILP+E +++LR +E  G +E+  +VR  C +++ 
Sbjct  117  ESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  190  LARVTGRATHNPLEGLHKFLLTKPVENFAHVSLDELPALLRAIRSYPHATDVRLGLQLLT  249
             A  TGRAT NP   L   L +    +F+H+  DELP +LR +  Y  +   R++ +LL 
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  250  MLACRPSELREARWQEFDLDAGLWLIPAERMKRRREHLIPLPSQAIALLRDLHNITGNYQ  309
            + + R  ELR A W E+D+D +LW IP  RMK RR H++PL+ Q   +L++L  ++G+Y+
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  310  LLFPGRSDTTKPRSNTVFLMALRRLGYEGRQTGHGFRHLASTILNENGFDSQHVEAQLSH  369
            L+FPGR D  KP S++ + M L+R+GY+GR TGHGFRH  STIL+E+GF+S  +E QL+H
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  370  V-KEGVRGVYDKSTYLEQRKIMMQWYADHLDRLAA  403
            V K+++RG Y+ + Y++ R+ MMQWYAD +D L+ 
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

361) PC1_0871 in NC_012917


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (1000),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 264/407 (65%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LASARKLREEARTILSVGDDPGVKKQHDKQAKK--NGNTFEAIARQWVA-ANIRWSEAHA  117
            LA AR  R++AR I+S G+DPG KK+ +K ++K    NTF+A+A +W    ++ WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETATRIQQRTTVIMRYAVQ  177
              VL +L+ ++FP +G+  VTD+   ++L  LR  EK+G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  EGLIASNPANDLCGAITPPPKNHYpalpleklpelleRIEGYSGRLLTRLAVQLNLLIFI  237
             G  + NPA++L +++++P   H+P L  + LP +L ++  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPIAGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W+EID+DNA+WT+P  R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNGELLFPGDHDARKPMSENTINKALRTMGYDTQVDICGHGFRTIACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +    GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A  +D R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

362) SPAB_03412 in NC_010102


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (1000),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 156/388 (41%), Positives = 254/388 (66%), Gaps = 2/388 (0%)

Query  7    PLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPVSGSRTNLSLGSYPAL  66
            +LT  ++  A+P+EKD+ L D  GL+LLVKT+G + WR++Y+  ++G   +L+LG YP +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR--IAGKEKKLALGVYPDV  59

Query  67   TLAAVRQIRDQHLTTIAQGIDPqqqqeqASEKRQIELDSIFSTVAANWFKMKSKSVTEDY  126
            +LA  R  RD+    I++G DP +++ +    ++I   + F ++A++W + KS S +E Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGAIPVQELKARTIVEALEPIKARGALETVRRLIQRVNEIMIYAV  186
            A+ +  +L+KD+FP +G  +V ++ +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGVGMAFERPKKQNMPTLRPEELPNLMRSLVMSNLSIPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGTRWAEIDLEAKLWTIPAERMKAKREHIVPLSSQALDILEVMKPISAHREHIF  306
            +R  E  ++ W+EID++  LWTIP  RMK +R H+VPLS Q  DIL+ +K +S++   +F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYAGKLVAHGMRSIASTAMNETGFNSDVIESALAHIEK  366
            P+R D ++PM+  + N  LKRIGY G+  +HG R   ST ++E GFNS  IE  LAH++K
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRALYLEQRKELMQWWGNFIN  394
            N +R +YN+ALY++ R+E+MQW +++I+
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYID  387

363) intZ in NC_012759


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 171/391 (44%), Positives = 266/391 (69%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  64
            +LTA+ +++A+P++K YKL+D    GL+LLV   G++YWR++Y++  +E   A+GVYP +
Sbjct  2    ALTARQVETARPKEKDYKLSDE--RGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDV  59

Query  65   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  124
            +L EAR +  ++R +I++G +P E+ RKEK  + ++ +  F  +A +W   +  +WSESY
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  125  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAP-EQARKLRRRIGEIFKFAV  183
            A+ V  AL+KD++P LGKRS+ DI + ++L +L++ E+ ++ E+ RK+R+   +IF++A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  184  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  242
             T   T NP ++L ++L A +++H + +   E+P F + L    GS   + A  LL+LT+
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  243  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            LRT ELR   W  I++++A  T+P   MK RR HVVPLSRQ  ++LQ+  T SG   +VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  303  PGRF-MDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  361
            PGR  ++KP+S ++I   L RIGY + ATGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  391
            K +IRG YN+A Y+  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

364) intZ in NC_000913


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 171/391 (44%), Positives = 266/391 (69%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  64
            +LTA+ +++A+P++K YKL+D    GL+LLV   G++YWR++Y++  +E   A+GVYP +
Sbjct  2    ALTARQVETARPKEKDYKLSDE--RGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDV  59

Query  65   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  124
            +L EAR +  ++R +I++G +P E+ RKEK  + ++ +  F  +A +W   +  +WSESY
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  125  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAP-EQARKLRRRIGEIFKFAV  183
            A+ V  AL+KD++P LGKRS+ DI + ++L +L++ E+ ++ E+ RK+R+   +IF++A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  184  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  242
             T   T NP ++L ++L A +++H + +   E+P F + L    GS   + A  LL+LT+
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  243  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            LRT ELR   W  I++++A  T+P   MK RR HVVPLSRQ  ++LQ+  T SG   +VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  303  PGRF-MDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  361
            PGR  ++KP+S ++I   L RIGY + ATGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  391
            K +IRG YN+A Y+  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

365) KO11_22995 in NC_017660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 169/412 (42%), Positives = 261/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDANRERA  407
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

366) EKO11_4043 in NC_016902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 169/412 (42%), Positives = 261/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDANRERA  407
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

367) LY180_22420 in NC_022364


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 169/412 (42%), Positives = 261/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDANRERA  407
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

368) WFL_22550 in NC_017664


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (999),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 169/412 (42%), Positives = 261/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDANRERA  407
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D+  E+ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

369) intZ in NC_010473


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (997),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 171/391 (44%), Positives = 266/391 (69%), Gaps = 7/391 (1%)

Query  34   PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  93
            +LTA+ +++A+P++K YKL+D    GL+LLV   G++YWR++Y++  +E   A+GVYP +
Sbjct  2    ALTARQVETARPKEKDYKLSDE--RGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDV  59

Query  94   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  153
            +L EAR +  ++R +I++G +P E+ RKEK  + ++ +  F  +A +W   +  +WSESY
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  154  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKERTAP-EQARKLRRRIGEIFKFAV  212
            A+ V  AL+KD++P LGKRS+ DI + ++L +L++ E+ ++ E+ RK+R+   +IF++A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  213  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  271
             T   T NP ++L ++L A +++H + +   E+P F + L    GS   + A  LL+LT+
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  272  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  331
            LRT ELR   W  I++++A  T+P   MK RR HVVPLSRQ  ++LQ+  T SG   +VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  332  PGRF-MDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  390
            PGR  ++KP+S ++I   L RIGY + ATGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  391  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  420
            K +IRG YN+A Y+  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

370) ECOK1_4788 in NC_017628


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  267 bits (997),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 170/408 (42%), Positives = 261/408 (64%), Gaps = 27/408 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKVVQKEARAEN--SGAYTFEAIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+A+A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLN  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWADYLD  402
            +   W    IE QL+H ++N++R++Y H+   +D RR MMQW ADY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYID  387

371) KPHS_05400 in NC_016845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/414 (41%), Positives = 262/414 (64%), Gaps = 27/414 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARTKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFAKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLE  297
             +R+ ELR A W E+DF ++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNGALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLKSNEGKI  408
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+ S   ++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSLSEQV  393

372) N559_4601 in NC_022082


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/414 (41%), Positives = 262/414 (64%), Gaps = 27/414 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARTKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFAKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLE  297
             +R+ ELR A W E+DF ++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNGALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLKSNEGKI  408
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+ S   ++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSLSEQV  393

373) NH8B_1001 in NC_016002


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 267/408 (66%), Gaps = 19/408 (4%)

Query  1    MALTKVAIDSLSPRADGKPLKVPDGQGLYVWVMPTGAKYWRLKYRFGGKEKSLAIGVYPE  60
            MALT   +++  +R+  K  K++D +GLY+ V  TGA+YWRLKYR++GKEK LA+GVYP+
Sbjct  1    MALTARQVET--ARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPD  58

Query  61   VSIKEARQKKDAARRLLADGVDPGEKKKAIKRDQTIEDASSFRAVAIEWHEKMAAEWAPR  120
            VS+ EAR K+D AR+++++G DPGEKK+  K  Q I  +++F+A+A EWH+  +  W+  
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  121  HAAAVLRSLEMYLFPALGDRPIAQITAMELMLELRKVEQLGLHDTTKRLRERCTAIFRRA  180
             A +VL +L+  +FP LG R++++I ++E++  LR++E+ G  +  +++R+ C  IFR A
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  181  EVTGRASSNPAAALVDEFISPVSAPQPALEQEDLPAFLDALSTTDRITLQTKYLVQLIMI  240
              TGRA+ NPA+ L   + +P +A  P L  ++LP FL  L+  +   + T+   +L+++
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPV-TRMATNLLLL  237

Query  241  LFTRIGETVRAEWDHIDLEAGVWEIPPETRKLKRKLMANASAHVVPLPRQAVEIFRQLQA  300
               R  E   AEW +ID++ ++W IP    K++RK       HVVPL+RQ  +I++QL++
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRK-------HVVPLSRQVTDILQQLKT  290

Query  301  FKLGDSNYVFPSFRYRKNHMSEATPLKAYERMGYGGNNKAHGHVVTHGFRATASTILNEA  360
            F  G+   VFP+    ++ MSEA+      R+GY+      G+   HGFR T STIL+E 
Sbjct  291  FS-GQYRLVFPGRCDINKPMSEASINMVLKRIGYD------GRATGHGFRHTMSTILHEQ  343

Query  361  GFNPDAIERQLSHKEPNKVRAAYNRAKYLEERRKMLQCW-ADYLDKMA  407
            GFN+  IE QL+H + N +R++YN+A Y++ RR M+Q W ADY+D ++
Sbjct  344  GFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLS  390

374) STY4821 in NC_003198


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/410 (41%), Positives = 262/410 (64%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             +R+ ELR A W E+DFD++LW +P  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSL  389

375) TY21A_22985 in NC_021176


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/410 (41%), Positives = 262/410 (64%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             +R+ ELR A W E+DFD++LW +P  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSL  389

376) t4518 in NC_004631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 167/410 (41%), Positives = 262/410 (64%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             +R+ ELR A W E+DFD++LW +P  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSL  389

377) ETAC_14745 in NC_020796


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 168/408 (42%), Positives = 267/408 (66%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLVNPNGSKYWRLQYRFNGKQKILALGVYPTVS  60
            MALT  +V T++P +K +KL+D +G+ LLV+  G++YWRL+YR+ GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQ--SEALTFESVARDWHTACKRKWSDSHS  118
            L+EAR KRD+A+K++S+G DP+EKK+ +K+ Q  S + TF+++A +WH      WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSMEDGLFTAIGRRKISELNTRDLLAPIKAVEASGRLEVAARLQQRTTAVMRYAVQ  178
              VL +++ ++F  +G+R ++++   ++L  ++ +E  G LE   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K  H P L  + ++ +L ++  + G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFDNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELR A WSEIDFDNA+WTIP  R             KM+  H+VPLSRQ  ++L+ +
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REISGECDLVFIGDHDFRKPMSENTVNKALRSMGYDTTAEVCGHGFRAMACSALIESGL-  357
            + +SG+  LVF G  D+ KPMSE ++N  L+ +GYD  A   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A  ID R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSL  389

378) PCA10_49420 in NC_021499


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 162/394 (42%), Positives = 252/394 (64%), Gaps = 6/394 (1%)

Query  10   PLADTVLASLDPETKEYRELDGDGLYFRVKPDGSKSWQLRYKKADGKWSWLGLGGYGTGD  69
            +L+   + +  P  K+Y+  D  GLY+ VK  G++ W+L+Y+   GK   L+LG Y    
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR-IAGKEKKLALGVYP---  57

Query  70   HQLTGEQARRKVRELRDSTAKDGSIMatkrarkaaeleaaNNTFEHLAREWYATKCKTWT  129
             +++  +AR K  + R   + +G     KR  K ++  +A NTF+ LA EW   K  +W+
Sbjct  58   -DVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWS  116

Query  130  EGTAVRTIGALEKHVFPEFGKRPYTGILPMEWMEFLRSMEQTGIVEQTSRVRGMCREIYD  189
            E+ A   + AL+K++FP +GKR+ T+ILP+E +E+LR +E+ G +E+  +VR  C +I+ 
Sbjct  117  ESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  190  LARVTGRATHNPLEGLHKFLLTKPVENFAHVSLEELPALLRAIRSYPHAPDVRIGLQLQT  249
             A  TGRAT NP   L   L +    +F+H+  +ELP +LR +  Y  +P  R++ +L  
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  250  MLACRPSELREASWEEFDLDAGLWLIPAERMKRRREHLVPLPNQALELLRELHNITGSFP  309
            + + R  ELR A W E+D+D +LW IP  RMK RR H+VPL+ Q  ++L++L  ++G + 
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  310  LLFPGRGDTTKPRSNTVFLMALRRLGYEGRQTGHGFRHLASTILNENGFDSQHVEAQLSH  369
            L+FPGR D  KP S++ + M L+R+GY+GR TGHGFRH  STIL+E+GF+S  +E QL+H
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  370  V-KEGVRGVYDKSTYLDQRKVMMQWYADHLDKLA  402
            V K+++RG Y+ + Y+D R+ MMQWYAD +D L+
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYIDSLS  390

379) int in NC_011741


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (994),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 166/411 (41%), Positives = 269/411 (66%), Gaps = 24/411 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALT  +V T++P +K +KL+D +G+ LL++  G++YWRL+YR+ GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQ--SEALTFEAVARDWHTACKRKWSDSHS  118
            L+EAR KRD+A+K++S+G DP+EKK+ +K+ Q  S + TF+A+A +WH      WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSMEDGLFTAIGRRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
              VL +++ ++F  +G+R ++++   ++L  ++ +E  G LE   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K  H P L  + ++ +L ++  + G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFDNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKDI  298
            R+ ELR A WSEIDFDNA+WTIP  R             KM+  H+VPLSRQ  ++L+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REISGECELVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
            + +SG+  LVF G  D+ KPMSE ++N  L+ +GYD      GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLNALKDR  406
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+++L ++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

380) intB in NC_004547


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 266/414 (65%), Gaps = 30/414 (7%)

Query  1    MSLTDSKVKNAKSLEKEYKLTDGFGMHLLVHPNGSKYWRLSYRFEKKQRLLALGVYPAVS  60
            M+LT  +V  A++ EK+YKL+D  G+ LLV   G++YWRL YR+  K++ LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQRRDEAKKLLAAGIDPSAKKQADNKTIQEKRNNTRAFKTVAKSWFSTKT-TWSED  119
            LA+AR +RD+A+K+++ G DP+ KK+ ++  + +K + T +F ++A  W   K+ +WSE 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEK--LTQKISATNTFHALATEWHQHKSLSWSES  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLAPIKKIEKLGYLEIAMRVKQYTTAIMRYA  179
            Y RSV   L+  +FP +G++ ++++   ++L  +++IEK G LE   +V+QY   I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKPQTEHRPAIELEEIPTLLERIEGYQGRSRLTQLAIKLNLL  239
            +       NPA +L +++  P++ H P +  +E+P +L ++  Y+G S +T++A +L LL
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHG-SPVTRMATNLLLL  237

Query  240  IFVRSSELRFARWSEIDFKSALWVIPEQRQAIEGIKHSGRGAKMRRKHYVPLCDQALAIL  299
              +R+ ELR A WSEIDF +ALW IPE R             KMRRKH VPL  Q   IL
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDIL  285

Query  300  EELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
            ++LK ++    G+  +++ G  D  KPMSE +IN  L+++GYD ++   GHGFR    + 
Sbjct  286  QQLKTFS----GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDA  410
            L E G+   W    +E+Q++H++KN++R++Y H A  ++ RR M+QW AD++D+
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

381) A458_03985 in NC_018028


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 160/395 (41%), Positives = 254/395 (65%), Gaps = 6/395 (1%)

Query  10   PLADTVLASLEPETKEYRELDGDGLYIRVKPDGSKSWQLRYKKADGKWSWLGVGGYGTGD  69
            +L+   + +  P  K+Y+  D  GLY+ VK  G++ W+L+Y+   GK   L++G Y    
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR-IAGKEKKLALGVYP---  57

Query  70   HQLTGEQARRKVRELRDSTAKDGSIMatkrakkaaeleaanntFEHLAREWYATKCKTWT  129
             +++  +AR K  + R   + +G     KR  K ++  +A NTF+ LA EW   K  +W+
Sbjct  58   -DVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWS  116

Query  130  EGTAVRTIGALEKHVFPVFGKRPYTSILPMEWMEFLRSMEQTGIVEQTSRVRGMCREIYD  189
            E+ A   + AL+K++FP +GKR+ T ILP+E +E+LR +E+ G +E+  +VR  C +I+ 
Sbjct  117  ESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  190  LARVTGRATHNPLEGLHKFLLTKPVENFAHVSLEELPALLRAIRSYPHAPDVRIGLQLLT  249
             A  TGRAT NP   L   L +    +F+H+  +ELP +LR +  Y  +P  R++ +LL 
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  250  MLACRPSELREARWEELNLDSGLWLIPAERMKRRRDHLVPLPTQAVALLRELQNITGNYS  309
            + + R  ELR A W E+++D++LW IP  RMK RR H+VPL+ Q   +L++L+ ++G+Y 
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  310  LLFPGRGNTTKPRSNTVFLMALRRLGYEGRQTGHGFRHLASTILNENGFDSQHVEAQLSH  369
            L+FPGR +  KP S++ + M L+R+GY+GR TGHGFRH  STIL+E+GF+S  +E QL+H
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  370  V-KEGVRGVYDKSTYLEQRKVMMQWYADHMDKLAS  403
            V K+++RG Y+ + Y++ R+ MMQWYAD +D L+ 
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

382) KOX_09480 in NC_016612


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (992),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 173/406 (43%), Positives = 268/406 (67%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGSGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPEIk  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G++YWRL+YR++GK+K LALGVYP++ 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   ladararrdearkllaNGVDPGDKKKNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHA  117
            LA+AR +RD+ARK++++G DPG+KK+++K+ Q  S + TF  +A EWH  +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  HRVLKSLEDNLFAALGERNITELKTRDLLAPIKAVEMSGRLEVAARLQQRTSAIMRYAVQ  177
            + VL +L+ ++F+ LG R++T++   ++L  ++ +E  G LE   +++Q  + I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  237
            +G    NPA E+++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  297
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKFMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

383) BCAL2961 in NC_011000


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (991),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 177/399 (45%), Positives = 271/399 (68%), Gaps = 10/399 (2%)

Query  1    MPLTDTTIRNTKPAEKPVKLFDGGGLFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPDVT  60
            M+LT   +  ++P EK  KL D  GL+LLV  +G RYWRLKYR AGKEK LALGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laaarrkrdeareklaaGIDPGEAKKAEKRTARLSAENSFEAVAREWHIKYAPTWSESHG  120
            LA AR KRD+AR  ++ G DPGE K+ EK T ++SA N+F+A+A EWH   + +WSES +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  SRILRRLEVDAFPWIGSKPIAELAPPDVLEVLRRVEKRGALETAHRLHANVSQVCRYAVA  180
              +L  L+ D FP +G ++++++ P ++LE+LRR+EKRG+LE  ++++   +Q+ RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAQRDVTADLRGALPPVQQEHMAAVTDPKQVAELLRSIDGYQGTFPVLCALRLFPLLF  240
            TGRA  + +++L ++L++ +  H + +  + +++ +LR +  Y+G+     A  L+ L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  QRPGELRAAEWSEFDLDASTWEIPSERMKRTKQGKASGGAHIVPLSAQAVAILRDLHALT  300
             R  ELR+AEWSE+D+D + W IP  RMK  ++       H+VPLS Q   IL++L +++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRK-------HVVPLSRQVTDILQQLKTFS  292

Query  301  GNSRFLFPSVRTKDRPMSDNTINGALRRLGYDGDTMTGHGFRAMARTILDEVLGVPVAIV  360
            G+ R++FP+    ++PMS+ +IN  L+R+GYDG + TGHGFR    TIL+E  G   A +
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYNRTAHLPQRREMMQRWADYLDQL  399
            E QLAH  K+++  +YN++  +  RREMMQ+ ADY+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

384) Y11_15011 in NC_017564


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (990),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 164/409 (41%), Positives = 267/409 (66%), Gaps = 28/409 (6%)

Query  1    MSLNGSKIRNLKPSAKPFKVSDSHGLYLLVNPSGSRLWYLKYRINRKESRLGLGAYPDVS  60
            M+L + ++   +P  K +K+SD +GLYLLV+ +G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLVQNINPAQQRSAERTTS--SPEKTFKHVALEWHKSNR-TWSENHA  117
            LA+AR +RD+ RK++ +  +P++++  E+ T   S+ +TF  +A EWH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ARLLASMNNHIFPIIGHLPVSELKPRHFIDLLKGIEKKGSLEVAARTRQHMCS-IMRHAV  176
              +L +++++IFP +G  +V+++ P + +++L+ IEK+GSLE   + RQ  C+ I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIDNNPAANLDGIIAPPVKRHYPALPLEQLSELLTRIEDYQQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  ++L+ +L ++ +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNKIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSHQSITILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLS+Q   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIREISGHQELVFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESG  356
            Q++ +SG+  LVFPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WSQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLNA  402
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

385) W5S_1543 in NC_017845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (989),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 258/407 (64%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRSAKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALT  +V +A+P EK YKL+D  G++LLV T G++YWRL+YR  GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQKRDEARKLIAAGVDPNEHKKAVK-TQQQDDEQTFEAVARAWHTDNK-KWSESHA  118
            L+EAR KRD+ARK+I+ G DP E K+  K TQ+    +TF+A+A  WH ++   WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERILKSLSDNIFPAIGSKHISDLKTRDLLRPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
              +L +L  +IFP +G + ++D+   ++L  ++ +E+ G LE  ++++Q    I  YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHrpalalerlpellGRIDGYKGREFTKWVINLSLLIFI  238
             G    NPA ++++++ + K  H P L  + LP +L ++  Y G   T+   NL LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWPEIDFERALWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILTKI  298
            R+ ELR A W+EIDF+ ALWTIP  R             KM+  H+VPLSRQ  +IL ++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            +  SG+  LVF G     KP+SE+++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADFLDA  402
              W    +E Q++H ++N++R++Y H A  +D RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

386) ETAE_3092 in NC_013508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (989),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 168/409 (42%), Positives = 261/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHDSNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH+ +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSYLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++    +L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLDAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +L  Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLD  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDS  403
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+DS
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

387) GM18_2022 in NC_014973


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (989),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 162/391 (42%), Positives = 262/391 (68%), Gaps = 4/391 (1%)

Query  7    PLSDLQVSRAKAQERQTTLFDGGGLFVLISPTGGKLWRFKYRFNGKSKLLSLGSYPYVSL  66
            +L+  QV  A+++E++  L D  GL++L+  TG++ WR+KYR+ GK K L+LG YP VSL
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  67   ADARAKREVYRKLLAHGIDPGEAKKAEQADKIAAAGSTFEAVARDWHRRFKSQWSAGHAE  126
            A+AR KR+  RK++++G DPGE K+ E+  +  +A +TF+A+A +WH++    WS + A 
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  127  QIMKRLEQDVFPWLGTRPIGEIKAPELLTVLRRIEVR-SLETAFRVKTACGQVFRYAVAE  185
             ++  L++D+FP LG R++ +I + E+L +LRRIE R SLE   +V+  C Q+FRYA+A 
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  186  GRAERDPVADLRGALPPVKYKNFAAPTNPKEVAPLLRAIDGFQGSFVVKCAMQLAPLLFV  245
            GRA  +P ++L ++L++ K  +F +   + E++ +LR +  ++GS V + A +L  L  +
Sbjct  182  GRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  246  RPGELRHAEWAEIDLEAAEWNIPAAKMKMGVPHLVPLPRQAVEILETLHPLTGHGKYVFP  305
            R  ELR AEW+EID++ A W IP ++MKM   H+VPL+RQ  +IL+ L  ++G+ + VFP
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFP  300

Query  306  CSRSLQRCMSENSVNAGLRRLGFEKSEITGHGFRAMARTILDEVLQVRPELIEHQLAHQV  365
                +++ MSE S+N  L+R+G++ +  TGHGFR    TIL+E     +  IE QLAH  
Sbjct  301  GRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  366  RDPLGRAYNRTTHLPERRKMMQTWADYLDGL  396
            ++++  +YN++  +  RR MMQ  ADY+D+L
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

388) Pecwa_1766 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (989),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 168/419 (41%), Positives = 269/419 (65%), Gaps = 30/419 (7%)

Query  1    MSLTDTKVKNAKPSEKVVKLTDGFGLYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVS  60
            M+LT  +V  A+P EK  KL+D  GLYLLV   G++YW+L YR+ GK+K +++GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQRRDDAKKLLAAGIDPSAKKRADNKSVQEKRNNTRAFKTVAKSWFATKT-TWSED  119
            LA+AR +RDDA+K+++ G DP+ KKR ++  + +K + T +F ++A  W   K+ +WSE 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEK--LTQKISATNTFHALATEWHQHKSLSWSES  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYA  179
            Y RSV   L+  +FP +G++ ++++   ++L  +++IEK G LE   +V+QY   I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKPQTEHRPAIELEEIPTLLERIDGYQGRSRLTQLAIKLNLL  239
            +       NPA +L +++  P++ H P +  +E+P +L ++  Y+G S +T++A +L LL
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHG-SPVTRMATNLLLL  237

Query  240  IFVRSSELRFARWSEIDFKSALWVIPEQREAIKGIKHSGRGAKMHRKHYVPLCDQALAIL  299
              +R+ ELR A WSEIDF +ALW IPE R             KM+RKH VPL  Q   IL
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDIL  285

Query  300  EELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
            ++LK ++    G+  +++ G  D  KPMSE +IN  L+++GYD ++   GHGFR    + 
Sbjct  286  QQLKTFS----GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDANSNGM  415
            L E G+   W    +E+Q++H++KN++R++Y H A  ++ RR M+QW AD++D+ S+ +
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

389) SNSL254_A4836 in NC_011080


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  265 bits (989),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 166/410 (41%), Positives = 260/410 (64%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAVMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    + RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSLQAMALLE  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLS Q   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGYDTKTDVCGHGFRTMARGALGESG  357
            QLK  SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDEI  404
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSL  389

390) intB in NC_011748


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  264 bits (987),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 158/382 (42%), Positives = 247/382 (65%), Gaps = 25/382 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLDA  376
            H A  ++ RR M+QW AD++D+
Sbjct  368  H-ALYIDGRREMMQWYADYIDS  388

391) BTI_1100 in NC_021173


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  264 bits (987),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 163/399 (41%), Positives = 271/399 (68%), Gaps = 10/399 (2%)

Query  1    MPLTDTAIKNAKPADKPMRLFDGGGLYLEIAPSGGKWWRLKYRFGGKEKRISLGVYPDVP  60
            M+LT   +  A+P +K  +L D  GLYL +  +G++ WRLKYR++GKEK+++LGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKEARERHDKARALLDGGADPGeakkaekraarLSTENSFEAVAREWHAKYAPSWSASHG  120
            L EAR ++D AR ++  G+DPGE K+ EK + ++S+ N+F+A+A EWH   + SWS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  ARLLRRLEVDAFPWIGGKPIAELAPPDVLDVLRRVEKRGALETAHRLHANVGQVCRYAVA  180
              +L  L+ D FP +G ++++++ P ++L++LRR+EKRG+LE  ++++    Q+ RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAARDVTADLRGALPPVQQEHMAAITDPKQVAELLRAIDGYQGTLPVSCALRLAPLLF  240
            TGRA+ + +++L ++L++ +  H + +  + +++ +LR +  Y+G+     A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  QRPGELRAAEWAEFDLDAGTWEIPSDRMKRTKQGKAAGGAHIVPLPLQAVAILRELQLLT  300
             R  ELR+AEW+E+D+D + W IP  RMK  ++       H+VPL+ Q   IL++L+ ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRK-------HVVPLSRQVTDILQQLKTFS  292

Query  301  GNGRLLFPSVRTKDRPMSDNTVNAALRRLGYDGDTMTGHGFRAMARTILDEVLGVPAPII  360
            G+ RL+FP+    ++PMS+ ++N  L+R+GYDG + TGHGFR    TIL+E  G  ++ I
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHTVKDPLGRAYNRTAHLQQRREMMQKWADYLDRL  399
            E QLAH  K+++  +YN++  ++ RREMMQ  ADY+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

392) ECO26_5435 in NC_013361


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  264 bits (988),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 165/409 (41%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPM  60
            M L ARQVETA+PKEK YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRILRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                +L  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFSEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  ++ FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDAAKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHTERNNVRAAYIHTSEHLDERRLMVQWWADFLEA  403
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW AD++++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

393) Pecwa_0718 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  264 bits (987),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 263/407 (65%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LT   +  A+P +K YKLSD +GLYLL+K  G++ W+LKYR++GKEKKLA+G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LASARKLREEARTILSAGDDPGVKKQHDKQAKK--NGNTFEAIARQWVA-ANIRWSEAHT  117
            LA AR  R++AR I+S G+DPG KK+ +K ++K    NTF+A+A +W    ++ WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
              VL +L+ ++FP +G+  VTD+   ++L  LR  EK+G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  EGLIASNPANDLYGAITPPPKNHYpalpleklpelleRIEGYSGRLLTRLAVQLNLLIFI  237
             G  + NPA++L +++++P   H+P L  + LP +L ++  Y G  +TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWVEIDLDNAMWTLPAQREPIAGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELR A W EID+DNA+WT+P  R             KM+  H+VPLS+Q   +L+QL
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KLLSGNGDLLFPGDHDALKPMSENTINKALRTMGYDTQVDICGHGFRTIACSALIESG--  355
            K +SG+  L+FPG  D  KPMSE +IN  L+ +GYD +    GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A  +D R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

394) SN31241_8570 in NC_021902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  264 bits (987),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 166/410 (41%), Positives = 260/410 (64%), Gaps = 27/410 (6%)

Query  5    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  64
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  65   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAEN--SGAYTFETIAREWHASNK-RWSED  121
            V+LA+AR KRD+A+K++ +G DP   ++  +  +  S++ TF+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  122  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAVMRYA  181
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    + RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  182  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  241
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  242  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSLQAMALLE  301
             +R+ ELR A W E+DFD++LW IP  R            MKM+  H+VPLS Q   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  302  QLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGYDTKTDVCGHGFRTMARGALGESG  361
            QLK  SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  362  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDEI  408
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSL  389

395) RCFBP_11461 in NC_014307


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  263 bits (983),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 170/396 (43%), Positives = 274/396 (70%), Gaps = 12/396 (3%)

Query  1    MALTDTAIRNAKAADKPIKLFDGGGLFLHITPAGQRYWRLKYRFAGKEKLLAIGVYPEVG  60
            MALT   +  A++ +K  KL D  GL+L +  +G RYWRLKYR+AGKEK LA+GVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHAKYAPGWSESNA  120
            L EAR +R++A+++++EG DP+  ++  K++    A+N+F+A+A EWH   + +WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KKVLARLENDVFPWLGGRPIAELKAPELLGVARRVESRGALDTAHRVLQTCGQIFRYAVA  180
            + VL  L++D+FP LG R+++++ + E+L + RR+E RG+L+  ++V Q C QIFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPREVAGLLRMFDGFTGTFVVK--CALLLAPM  238
            TGRA  +P+++L ++L+++K+ H+ +   + E++ +LR +  + G+ V +    LLL   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  239  LFVRPGELRAAEWADIDLDAGEWRFVSSKRDV--AHIVPLSTQAVAILRDLHALTGHGRY  296
            L  R  ELR+AEW++ID+D + W +  S+  +   H+VPLS Q   IL++L +++G+ R 
Sbjct  240  L--RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  297  LFPGARDKSKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQL  356
            +FPG  D +KPMSEA+IN  LKR+G D +   TGHG R    TIL+E  GF++  IE+QL
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  357  AHRKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDEI  391
            AH  K++  ++Y++  ++  R++MMQ W ADY+D +
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

396) CKO_03532 in NC_009792


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  263 bits (983),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 166/407 (41%), Positives = 265/407 (66%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALT  +V T++P +K +KL+D +G+ LL++  G++YWRL+YR+ GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVSVGIDPSEKKKADKIEQ--SEALTFEAVARDWHTACKRKWSDSHS  118
            L+EAR KRD+A+K++S G DP+EKK+ +K+ Q  S + TF+A+A +WH      WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSMEDGLFTTIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
              VL +++ ++F  +GKR ++++   ++L  ++ +E  G LE   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMAGAIAVAKRIHRPALPFERFSELLERIDNFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K  H P L  + ++ +L ++ ++ G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFENAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELR A WSEIDF+NA+WTIP  R             KM+  H+VPLSRQ  ++L+ +
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REISGEFDLVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
            + +SG++ LVF G  D+ KPMSE ++N  L+ +GYD      GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLDE  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

397) intB in NC_004547


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  263 bits (982),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 167/414 (41%), Positives = 265/414 (65%), Gaps = 30/414 (7%)

Query  1    MSLTDTKVKNAKPSEKVVKLTDGFGLYLLVHTNGSKYWQLGYRFEGKQKVFSIGVYPAVS  60
            M+LT  +V  A+P EK  KL+D  GLYLLV T G++YW+L YR+ GK+K +++GVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARQRRDEAKKLLAAGVDPSAKKRADNKSVQEKRNNTRAFKTVAKSWFATKT-TWSED  119
            LA+AR +RD+A+K+++ G DP+ KKR ++  + +K + T +F ++A  W   K+ +WSE 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEK--LTQKISATNTFHALATEWHQHKSLSWSES  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYA  179
            Y RSV   L+  +FP +G++ ++++   ++L  +++IEK G LE   +V+QY   I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKPQTEHRPAIELEEIPTLLERIEGYKGRSRLTQLAIKLNLL  239
            +       NPA +L +++  P++ H P +  +E+P +L ++  Y G S +T++A +L LL
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHG-SPVTRMATNLLLL  237

Query  240  IFIRSSELRFARWSEIDFKSGLWVIPEQREAIKGIKHSDRGAKMRRKHYVPLCEQALVIL  299
              +R+ ELR A WSEIDF ++LW IPE R             KMRRKH VPL  Q   IL
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDIL  285

Query  300  GELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
             +LK ++    G+  +++ G  D  KPMSE +IN  L+++GYD ++   GHGFR    + 
Sbjct  286  QQLKTFS----GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDA  410
            L E G+   W    +E+Q++H++KN++R++Y H A  ++ RR M+QW AD++D+
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

398) Alide2_0433 in NC_015422


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  262 bits (980),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 161/401 (41%), Positives = 261/401 (66%), Gaps = 13/401 (3%)

Query  1    MPLTELRLKALKSKPEPGKHGDRDGLYVRVDAKGAMRWQWRIRTPRGENIVSYGVYPEVS  60
            M+LT  ++ + ++K    K +D  GLY+ V + GA  W+ + R +  E+ ++ GVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARQRHSEARRQVRDGVNPNeakrakkeevaakTINSFEAVTREWFAHRKDEWAPSYG  120
            LAEAR ++ +AR+ + +G +P E KR  K      + N+F+A++ EW  H+   W+ SY+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKIMRRMEVDVFPYVGGKSISEITPPELLEVLRRIEKRGAIETAHRALENCGQVFRYGVA  180
              ++  ++ D+FPY+G +S+++I P E+LE+LRRIEKRG++E  ++  + C Q+FRY++A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRIPSDPSRDLKGALRKPMVKHMAAITDPADLAALLRAIDGYAGTHVVRCALKLAPMLM  240
            TGR   +P+ +L ++L  P   H + +  + +L+ +LR +  Y G+ V R A +L  +  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  LRPGELRMARWEEFDLDAATWTIPPERMKRQRAGKMNGDPHMVPLPRQAVEVLRDLHPLT  300
            LR  ELR A W E+D+D A WTIP  RMK +R        H+VPL+RQ  ++L++L  ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRR-------KHVVPLSRQVTDILQQLKTFS  292

Query  301  GPTGLVFRGERDHERPMSENTVNASLRRMGYDTQTQVTGHGFRATARTILDEHMGYDRAV  360
            G   LVF G  D ++PMSE ++N  L+R+GYD ++  TGHGFR T  TIL+E+ G++ A 
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAW  349

Query  361  IEAQLAHSVADSLGRAYNRTEFLKQRREMLQAW-ADYLEGL  400
            IE QLAH   +S+  +YN++ ++  RREM+Q W ADY+++L
Sbjct  350  IEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

399) ECENHK_02620 in NC_018405


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 166/412 (41%), Positives = 271/412 (66%), Gaps = 24/412 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFASIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGERELLEGVKHSQRGSKMRTPHLIPLSRQALTILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDANREKV  407
              W    +E Q++H +++S+R++Y H A  ++ RR M+QW ADY+D+  E+V
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

400) NMBM01240355_1501 in NC_017517


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  262 bits (980),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 148/361 (41%), Positives = 245/361 (68%), Gaps = 0/361 (0%)

Query  1    MYLYVNTGGGKLWRFDFSHNGKRKTLSIGKYPTVSLVEARQTAENARRLLAAGQDPGEAK  60
            +YL V+T G++ WR+ +   GK K L++G YP VSL EAR   ++AR++++ G DPGE K
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   QQEKRERQAAVSNTFRSIAAEWHKHRETGLTGNHAARVWDSLKKDVFPMLGGLPVSEIKV  120
            ++EK  ++ + +NTF+++A+EWH+H+  + + + A  V ++L KD+FP LG  +V++I  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  121  SQVKEVIEAVAARGALETAGRILQRIKAVFTYAIQTERAENNPAVPLVGLIKAPKQKHQP  180
             ++ E++  +  RG+LE   ++ Q  + +F YAI T RA  NPA  L + + APK  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  181  ALPQSELTEFYRRLMLEQAERQTKIAMQLIMLTFVRNGELRAAEWVEFDLNGAEWSIPAA  240
             L   EL  F R+L   ++   T++A +L++LT +R  ELR+AEW E+D++ A W+IP +
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  241  KMKMKAPHIVPLADWTLELLAELKEITGHSRYLFPSVKDPDKHMSENILSYLMGRMGYKG  300
            +MKM+  H+VPL+    ++L +LK ++G+ R +FP+  D +K MSE  ++ ++ R+GY G
Sbjct  266  RMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDG  325

Query  301  IATPHGFRSLATDVLNENGFDSDVIERQLAHVEQNKVRAAYHRTEYIPQRKELMQWYSDC  360
             AT HGFR   + +L+E+GF+S  IE QLAHV++N +R++Y+++ YI  R+E+MQWY+D 
Sbjct  326  RATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADY  385

Query  361  L  361
            +
Sbjct  386  I  386

401) Nit79A3_1833 in NC_015731


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  262 bits (981),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 158/392 (41%), Positives = 270/392 (69%), Gaps = 4/392 (1%)

Query  1    MKLTDpeikaakpkekpYSLPDGHGLVLLVQPSGAKWWRYRYRFNGTAKMLSMGVYPDVT  60
            M LT  ++ +A+PKEK Y L+D +GL LLV+ +GA+ WR +YR+ G  K L++GVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKEARNQQARFKELLAQSIDPSLHRQEQKQQQAIATENSFESIARLWWNQWSAARNQRHA  120
            L EAR ++   + +++++ DP+  ++ +K  Q I++ N+F+++A  W ++ S ++++  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DYVIRRLEADIFPVIGRKPVTELSAPMLLMAIKKIEARGALDIAKRALTTCNQIMRYAVA  180
              V+  L+ DIFP +G+++VT++ +  +L  +++IE RG+L+  ++    CNQI RYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  HGLAERNPAADIKPSDVLKPTTKTNYARLDQKELPELLRKIDAYDGQPLTKLALQLMALT  240
             G A  NPA+++ ++  L +   +++++L   ELP +LRK+  Y+G P+T++A +L+ LT
Sbjct  181  TGRATVNPASELTST--LAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  FVRTSELIGAKWDEIELDNKQWRIPAECMKMKTPHIVPLSNQAIAVLGKIKELAADQILL  300
             +RT EL +A W EI++DN  W IP   MKM+  H+VPLS Q   +L ++K ++++  L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPSERRDGNSMSNNTILYALYRLGYHSRMTGHGFRGIASTILHERGYSHEHIELQLAHAK  360
            FP+     ++MS+ +I   L R+GY++R TGHGFR   STILHE+G++   IE+QLAH  
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RDQVSASYNHALYLEPRARMMQDW-ADYLEAI  391
            ++ + ++YNHALY++ R  MMQ W ADY++++
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

402) EBL_c34780 in NC_017910


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  262 bits (978),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 167/407 (42%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSTSHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFASVGKRNIKDIGTRDLLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR++ DI   ++L  ++ +EK G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEIAGAIATAKRKHRAALDLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFI  238
             G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELR A W+E+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKKEVCGHGFRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

403) Ser39006_3432 in NC_022268


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  261 bits (976),  Expect = 4e-71, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 268/407 (66%), Gaps = 25/407 (6%)

Query  1    MALTDLKVKSAKPSSKPIKLTDGFGMHLLVHTNGSKYWRFQYRFAGKQKMLALGVYPSVS  60
            MALT  +V +A+P  K  KL+D  G+ LLV T G++YWR++YR+AGK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARERRDNARKLIANGIDPSEKKKADKIEE--SGALTFETVARSWHSSNK-TWSEGHR  117
            LAEAR +RD+ARK+I++G DP+EKK+ +K+ +  S++ TF+++A  WH  +  +WSE+  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  TLILNSLTTHVFPIIGQRNVTDLKTRDLLVPVKKAEQTGHLELASRLQQRITAIMRYAVH  177
              +L++L  ++FP +G+R+VTD+   ++L  +++ E+ G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  NALIEHNPAYDLAGAIATVKSVHRPALSLERIAELMERIEAYKGKGLTQLAVRLCLLTFI  237
             +    NPA +L++++A+ K+ H P L  + ++ ++ ++  Y G  +T++A  L LLT +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEFDFKNALWTIPAEREPLKNIKFSHRGSKMKSPHLVPLSKQSLAILKEI  297
            R+ ELR A WSE+DF NALWTIP  R             KM+  H+VPLS+Q   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  KAISGAHKFVFTGFSYADKPISENTINKALRAMGYNTQKDVCCHGFRTMACSALIESGL-  356
            K++SG  ++VF G    +KP+SE +IN  L+ +GY+ +     HGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERSSVRAAYIHKAEHLDERRLMLQWWANFLDA  401
              W    +E Q++H +++S+R++Y H A  +D RR M+QW A+++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

404) Dsui_0218 in NC_016616


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  261 bits (974),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 168/396 (43%), Positives = 258/396 (66%), Gaps = 9/396 (2%)

Query  4    PLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVS  63
            +LT  +V  A+P EK YKL D +GLYL V+ +GA++WR +Y+I+  K+   ++G YP VS
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIA-GKEKKLALGVYPDVS  60

Query  64   LSDarrerewareqaKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYL  123
            L++AR  R+ AR    +G +P + K  E+L +    +NTF+A+A EW +++   W+E Y 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  124  YQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVA  183
              V   L++D+FP +G  ++  + + ++L I+R +E RG+      +RQ   QIFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  184  TLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFV  243
            T RA  +P++ L +++      H P L  DE+PV L KL  Y G   T +AT+L+L T +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  244  RTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG  303
            RT+ELR AEW+E+D++ + W +P  RMKM+++      H+VPLSRQ  ++L++LKT+SG 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESRMKMRRK------HVVPLSRQVTDILQQLKTFSGQ  294

Query  304  RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL  363
             +++FP     +  M+ ++IN  L R+GY G+ +GHGFR T ST+LHE G N   IE QL
Sbjct  295  YRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  364  AHAERNKVKAAYNHAEYLPERREMMQAW-SDWIDEL  398
            AH ++N ++++YNHA Y+  RREMMQ W +D ID L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

405) A225_0566 in NC_018106


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  261 bits (974),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 256/407 (63%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPNGSKYWRFRFRFGGKQHLMAFGVYPEIS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LANARKKREEARKLVAAGIDPREHKRALK-EEQAKEIITFEKVAREWLATNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTCNIAELGTRDLLAPIKAVEVSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G  +++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASGNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+ +  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWANFLDA  402
              W    +E Q++H+++NS+R++Y H A  +D R+ M+QW A+++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

406) EcDH1_3727 in NC_017625


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

407) intB in NC_017638


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

408) intB in NC_010473


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

409) intB in NC_007779


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

410) intB in NC_011751


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 157/381 (42%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+ARK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

411) ETAF_2789 in NC_017309


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (971),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 264/408 (65%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVS  60
            MALT  +V T++P +K +KL+D +G+ LL++  G++YWRL+YR++GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVFDGIDPSEKKKADKIEQ--SEALTFEAVARDWHTACKRKWSDSHS  118
            L+EAR KRD+A+K++ +G DP+EKK+ +K+ Q  S + TF+A+A +WH      WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSMEDGLFTAIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
              VL +++ ++F  +GKR ++++   ++L  ++ +E  G LE   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K  H P L  + ++ +L ++  + G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFDNAMWTIPAEREPLPGVKHSHRGSKMRTPHLVPLSCQALAVLTEI  298
            R+ ELR A WSEIDFDNA+WTIP  R             KMR  H+VPLS Q   +L ++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KEISGDHELVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESGL-  357
            K +SG+  LVF G  D+ KPMSE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A  +D R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSL  389

412) ECO55CA74_24440 in NC_017656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (971),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 165/408 (41%), Positives = 265/408 (65%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALT  +V T++P +K +KL+D +G+ LL++  G++YWRL+YR+ GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQ--SEALTFESVARDWHKACKRKWSDSHS  118
            L+EAR KRD+A+K++S+G DP+EKK+ +K+ Q  S + TF+++A +WH+     WS+S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSMEDGLFTAIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
              VL +++ ++F  +GKR ++++   ++L  ++ +E  G LE   +++Q    + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLARIDSFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K  H P L  + ++ +L ++  + G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFENAMWTIPGEREPLPGVKHSHRGSKMRTPHLVPLSCQALAVLTKI  298
            R+ ELR A WSEIDF+NA+WTIP  R             KMR  H+VPLS Q   +L ++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KEISGDHELVFIGDHNFRKPMSENTVNKALRAMGYDTTVEVCGHGFRAMACSALIESGL-  357
            K +SG+  LVF G  ++ KPMSE ++N  L+ +GYD      GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A  +D R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSL  389

413) PFLU5281 in NC_012660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 163/400 (41%), Positives = 258/400 (65%), Gaps = 12/400 (3%)

Query  1    MPLKDTNCRNAKPQDKPYRLYDEQGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPEVG  60
            M+L   +   A+P++K Y+L DE+GLYL V+  G+RYWRLKYR+ GKEK+LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQEARRKRDDARVQLASGQDPSLQRRMAKVVSQLDHQHTFESVATQWLNIRESSWDPEYT  120
            L EAR KRDDAR  ++ G DP+ ++R  K+  ++   +TF+++AT+W + +  SW   Y+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RTVRQRLELNAFPWLGKLPISSISTPMLVENLQRIIKRGARETARRVAQIYKQIFEFAEA  180
            R+V + L+ + FP LGK +++ I    ++E L+RI KRG+ E  R+V Q  +QIF +A A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  AGITPPNQIGNLSRTLPAKRVKHFAAVTDPEKLGALLKALDSYAGTMPVCCALKLAPLLF  240
            +G +  N  ++L+ TL+A +  HF+ +  ++ L  +L+ L  Y G+     A +L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  CRPGDLRHMEWSEVNLDAGEWLIPGHKMKGLTATKQDRPDHLVPLSQQAIAVLHELKPLT  300
             R  +LR  EWSE+++D + W IP  +MK        R  H+VPLS+Q   +L++LK ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKM-------RRKHVVPLSRQVTDILQQLKTFS  292

Query  301  GRHRYAFPSARGGDRPMSNNAVLSALRRMDISGDEMTGHGFRATARTIGAEVLGFRPDLL  360
            G+ R  FP+  + ++PMS+ ++   L+R++  G   TGHGFR T  TI  E  GF +  +
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EHQLAHTVKNPLGRAYDRTSFLPERREMMQIW-ADFLDSI  399
            E QLAH  KN++  +Y+++ ++  RREMMQ W AD++DS+
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

414) Rpic_2072 in NC_010682


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (973),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 173/396 (44%), Positives = 271/396 (69%), Gaps = 12/396 (3%)

Query  1    MALTDTAVRNARPAEKPIKLFDGGGLFLHITPGGQRYWRLKYRFAGKEKLLALGVYPEVG  60
            MALT   V  ARP EK  KL D  GL+L +   G RYWRLKYR+AGKEK LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHTKYAPGWSKSNA  120
            L EAR +R++A+++++EG DP+  ++  K++    A+N+F+A+A EWH   + +WS S A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  DKVIARLQNDVFPWLGGRPIAELKAPDLLAVCRRVESRGALDTAHRVLQTCGQIFRYAVA  180
              V+  L++D+FP LG R+++++ + ++L + RR+E RG+L+  ++V Q C QIFRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPKEVAGLLRVFDGFTGTFVVK--CALLLAPM  238
            TGRA  +P+++L ++L+++K+ H+ +   + E++ +LR +  + G+ V +    LLL   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  239  LFVRPGELRAAEWADIDLDAGEWRFVSSKRDV--AHIVPLSTQAVAILRDLHALTGHGHY  296
            L  R  ELR+AEW++ID+D + W +  S+  +   H+VPLS Q   IL++L +++G+ + 
Sbjct  240  L--RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  297  VFPGARDKKKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQL  356
            VFPG  D +KPMSEA+IN  LKR+G D +   TGHG R    TIL+E  GF++  IE+QL
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  357  AHRKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDRL  391
            AH  K++  ++Y++  ++  R++MMQ W ADY+D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

415) PAGR_g3659 in NC_017554


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (973),  Expect = 7e-71, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 266/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAAKVEQEQEAI-TFEVVAREWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A EWH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFDAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMKTPHLVPLSRQAVAILEKI  298
            R+ ELR A W+E+DF+ A+WTIP  R             KM+  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGVRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHG R    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

416) H650_18115 in NC_021500


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (973),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 268/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPTENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAIIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFAHWSEVDFETAMWTIPGEREPLEGVKHSQRGSKMKTPHLVPLSQQALAILEKI  298
            R+ ELR A+WSE+DF+ A+WTIP  R             KM+  H+VPLS+Q   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRDLIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A  ++ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

417) NMV_0809 in NC_017501


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (971),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 148/361 (41%), Positives = 246/361 (69%), Gaps = 0/361 (0%)

Query  1    MYLYVNTSGGKLWRFDFSHNGKRKTLSIGKYPTVSLLEARQTSENARRLLAAGQDPGEAK  60
            +YL V+T+G++ WR+ +   GK K L++G YP VSL EAR   ++AR++++ G DPGE K
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   QQEKRERQAAVSNTFRSIAAEWHKHCETGLTGNHAARVWDSLEKDVFPMLGGLPVSEIKV  120
            ++EK  ++ + +NTF+++A+EWH+H   + + + A  V ++L+KD+FP LG  +V++I  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  121  SQVKEVIEAVAARGALETAGRILQRIKAVFTYAIRTERAENNPAVPLVGLIKAPKQKHQP  180
             ++ E++  +  RG+LE   ++ Q  + +F YAI T RA  NPA  L + + APK  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  181  ALPQSELTEFYRRLMLEQAERQTKIAMQLIMLTFVRNGELRAAEWVEFDLNGAEWSIPAA  240
             L   EL  F R+L   ++   T++A +L++LT +R  ELR+AEW E+D++ A W+IP +
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  241  KMKMKAPHIVPLADWTLELLAELKEITGHSRYLFPSVKDPDKHMSENILSYLMGRMGYKG  300
            +MKM+  H+VPL+    ++L +LK ++G+ R +FP+  D +K MSE  ++ ++ R+GY G
Sbjct  266  RMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDG  325

Query  301  IATPHGFRSLATDVLNENGFDSDVIERQLAHVEQNKVRAAYHRTEYIPQRKELMQWYSDC  360
             AT HGFR   + +L+E+GF+S  IE QLAHV++N +R++Y+++ YI  R+E+MQWY+D 
Sbjct  326  RATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADY  385

Query  361  L  361
            +
Sbjct  386  I  386

418) Pecwa_1669 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (972),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 167/411 (41%), Positives = 259/411 (64%), Gaps = 24/411 (5%)

Query  1    MALTDIKVRSTKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALT  +V +++P EK YKL+D  G++LLV T G++YWRL+YR  GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARQKRDEARKLIAAGVDPNEHKKAVK-TQQQDDAQTFEVVARAWHADNK-KWSGSHA  118
            L+EAR KRD+ARK+I+ G DP E K+  K TQ+   ++TF+ +A  WH ++   WS S A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERILKSLSDNIFPAIGGAHIANLKTRDLLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
              +L +L  +IFP +G   ++++   ++L  ++ +E+ G LE  ++++Q    I  YA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHrpalalerlpellGRIDGYKGREFTKWVINLSLLIFI  238
             G    NPA ++++++ + K  H P L  + LP +L ++  Y G   T+   NL LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWPEIDFERALWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILKKI  298
            R+ ELR A W+EIDF+ ALWTIP  R             KM+  H+VPLSRQ  +IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            +  SG+  LVF G     KP+SE+++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERKLMLQWWADFLDANRER  406
              W    +E Q++H ++N++R++Y H A  +D R+ M+QW AD++D+  E+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

419) SMD_1781 in NC_017671


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  260 bits (972),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 160/398 (41%), Positives = 255/398 (65%), Gaps = 7/398 (1%)

Query  7    PLTDTAIRKAKPGPKPTKLRDGGGLYVQLNPDGSRWWRWDYRRPVTGKRNTLSLGTYPEV  66
            +LT   +  A+P  K  KL D  GLY+ ++  G+R WR  YR  ++GK + L+LG YP+V
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR--IAGKEKKLALGVYPDV  59

Query  67   SLADARGRQAEARRLLASGIDPGEHRkaakvagvekaaNSFEVVTREWLGKQK--WVESY  124
            SLA+AR ++ +AR++++ G DPGE ++  K++    A+N+F+ ++ EW   +   W ESY
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  125  RCKVVAWMDNDVFPWIGGRPVAELAAPDFLRVARRIEERGAIESAHRIMQNCGQVMRYAV  184
               V+  +D+D+FP +G R+V+++ + + L + RRIE RG++E  +++ Q C Q+ RYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  185  ATGRADRNPVADLRGALAPPMERHHAAITDPRELGGLLRAIDGYAGDASTRAALRLAPLV  244
            ATGRA  NP ++L ++LA+P   H + +    EL  +LR +  Y G + TR A  L  L 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  245  FVRPGELRHAEWSEIDFDAGEWNIPAHKMKMREPHLVPLSSQAVAILRDLQPLTGHRQYV  304
             +R  ELR AEWSEIDFD + W IP  +MKMR  H+VPLS Q   IL++L+ ++G+ + V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  305  FPGGRSPKRPLSDNALTAALRRMGFDKETMTAHGFRATARTLLDEVLGWRPDLIEHQLAH  364
            FPG    ++P+S+ ++   L+R+G+D  + T+HGFR T  T+L+E  G  +  IE QLAH
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  365  AVRDPNGRAYNRTSHLPERRKMMQAWADYLDALRADTG  402
              +++   +YN++  +  RR MMQ  ADY+D+L  + +
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

420) ETEC_4611 in NC_017633


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (969),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 245/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+AR+++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

421) intB in NC_011750


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (969),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 245/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+AR+++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

422) Fraau_3064 in NC_017033


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 185/398 (47%), Positives = 276/398 (70%), Gaps = 25/398 (6%)

Query  8    LTALAIKAAEP-GKHF---DGGGMFLHITTKG-RYWRLKYRVAGKEKLLALGVYPEVSLa  62
            LTA  + +A P  K++   D  G++L + T G RYWRLKYR+AGKEK LALGVYP+VSLA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  63   earkrrdearrVIGEGGDPSAIRRTTKVTAVLATANTFQAVAEEWLAQHKARMAPATYNK  122
            EAR +RD+AR++I+EGGDP+  +R  K+T  ++++NTF+A+A EW  QHK+   + +Y +
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESYAR  121

Query  123  AVW-MLGDLVYPWLGRRPISDIEAPELLAVLRRIEARGAHTTAHRTKQRCGQVFRYAIAT  181
            +V   L+  ++P LG+R+++DI + E+L +LRRIE RG+    ++ +Q C Q+FRYAIAT
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  182  GRAKRDPSADLRGALAPLNPTSRAAITDPLRVGEL---LRAIDGYSGTFPVICALRLAPM  238
            GRA  +P+++L ++LA    +++AA    LR +EL   LR +  Y G+ PV    R+A  
Sbjct  182  GRATVNPASELTSTLA----APKAAHFPHLRADELPVFLRKLAEYHGS-PVT---RMATN  233

Query  239  LF----VRPGELRHAEWAEFDLDQSLWRIPAEKMKMRDEHLVPLPDQALAILRDLLPLTG  294
            L+    +R  ELR AEW+E+D+D++LW IP  +MKMR  H+VPL+ Q   IL++L  ++G
Sbjct  234  LLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSG  293

Query  295  PDGFLFPGERSASRPMSENTVNAALRRLGYDKDTMTGHGFRAMASTRLNELGWSPDVIER  354
               ++FPG    ++PMSE ++N  L+R+GYD +  TGHGFR   ST L+E G ++  IE 
Sbjct  294  QYRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEM  352

Query  355  QLAHAERNKVRAAYNRAQYLPERQRMMQAW-ADYLDSL  391
            QLAH ++N +R++YN+A Y+  R+ MMQ W ADY+DSL
Sbjct  353  QLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

423) intB in NC_012971


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD++RK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

424) intB in NC_012892


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD++RK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

425) ECBD_3766 in NC_012947


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD++RK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

426) intB in NC_012967


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD++RK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

427) intB in NC_011745


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 245/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD+AR+++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLAKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

428) intB in NC_017663


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 244/381 (65%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            + LLV   G++YWRL+YR  GK+K LALGVYP+++LA+AR++RD++RK++++G DPG+KK
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            +++K+ Q  S + TF  +A EWH  +   WSE  A+ VL +L+ ++F+ LG R+++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             ++L  ++ +E  G LE   +++Q    I RYA+ +G    NPA E+++++A+ +  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L    +P +L K+  Y G P+TR A +L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
            R             KMR  H+VPLS Q   IL+Q+K F G   L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A  ++ RR M+QW AD++D
Sbjct  368  H-ALYIDGRREMMQWYADYID  387

429) YSA_03449 in NC_017986


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 162/401 (41%), Positives = 257/401 (65%), Gaps = 10/401 (2%)

Query  1    MPLKDTNCRNAKPQDKPYRLYDEQGLYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPEVG  60
            M+L   +   A+P++K Y+L DE+GLYL V+  G+RYWRLKYR+ GKEK+LALGVYP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQEARRKRDDARVQLASGQDPSLQRRMAKVVSQLDHQHTFESVATQWLSIRESSWDPEYT  120
            L EAR KRDDAR  ++ G DP+ ++R  K+  ++   +TF+++AT+W   +  SW   Y+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RTVRQRLELNAYPWLGKLPISSISTPMLVENLQRIIKRGARETARRVAQIYKQIFEFAEA  180
            R+V + L+ + +P LGK +++ I    ++E L+RI KRG+ E  R+V Q  +QIF +A A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  AGITPPNQIGNLSRTLPAKRVKHFAAVTDPEKLGALLKALDSYSGTMPVCCALKLAPLLF  240
            +G +  N  ++L+ TL+A +  HF+ +  ++ L  +L+ L  Y G+     A +L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  CRPGDLRHMEWSEVNLDTGEWLIPGHKMKGLTATKQDRPDHLVPLSQQAVAVLRELKPLT  300
             R  +LR  EWSE+++D + W IP  +MK        R  H+VPLS+Q   +L++LK ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKM-------RRKHVVPLSRQVTDILQQLKTFS  292

Query  301  GRHRYAFPSARGGDRPMSNNAVLSALRRMDISGDEMTGHGFRATARTIGAEVLGFRPDLL  360
            G+ R  FP+  + ++PMS+ ++   L+R++  G   TGHGFR T  TI  E  GF +  +
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EHQLAHTVKNPLGRAYDRTTFLPERREMMQTWADYLDSIKN  401
            E QLAH  KN++  +Y+++ ++  RREMMQ  ADY+DS+ +
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

430) Nmul_A2184 in NC_007614


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  258 bits (964),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 159/392 (41%), Positives = 260/392 (67%), Gaps = 5/392 (1%)

Query  1    MALTDTAIRNTKSADKPLKLTDERGLYLLLKPNGSRWWRFDYRYGGKRKTLSMGVYPDVS  60
            MALT   +  +++ +K  KL+DERGLYLL+K  G+R WR+ YR +GK K L++GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKDARNRRDEARKLLASDVDPGENRKAVKAAKLEKTTNSFEVITREWYAKFSPTWNESHG  120
            L +AR +RD+ARK+++ + DPGE+++  K ++   +TN+F+ ++ EW    S +W+ES +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  eriirrferdifPWIGSKPISEIAAPELLATVRRIESRGAVETAHRALGNCGQVFRYAIA  180
              ++  +++DIFP +G +++++I + E+L  +RRIE RG++E  ++    C Q+FRYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TARATRDISADLRGALPPVKGEHFAAITEPKQVGALLRAIDGYTGSHVVRCALRLAPLVF  240
            T+RAT + +++L ++L++ K+ HF+ +  + ++  +LR +  Y GS V R A  L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRPGELRKAEWKDIDLDGGEWRYTVTKTNTP--HIVPLSTQAVEILKELQALTGRSRFVF  298
            +R  ELR AEW +ID+D + W    ++ +    H+VPLS Q  +IL++L++++G+ R+VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PGARTNGRPMSDNAILAALRRMGIDKEEMSGHGFRAMARTILDEVLGVRPDFIEHQLAHS  358
            PG     +PMS+ +I   L+R+G D    +GHGFR    TIL+E  G  +  IE QLAH 
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  359  VRDPNGRAYNRTAHLPERRKMMQQWADYLDKL  390
             +++   +YN++  +  RR MMQ  ADY+D L
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

431) SPC_4619 in NC_012125


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  258 bits (964),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 265/407 (66%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVS  60
            MALT  +V T++P +K +KL+D +G+ LL++  G++YWRL+YR++GK+K LALGVYP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQ--SEALTFEAVARDWHTACKRKWSDFHS  118
            L+EAR KRD+A+K++S+G DP+EKK+ +K+ Q  S + TF+A+A +WH      WS+  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ERVLKSLEDNLFSSIGQRKIAELKTKDLLDPVKTVAASGRLEVAARLQQRTTVIMRYAVQ  178
              VL +L+ ++F+ +G+R ++++   ++L+ ++ +   G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  NGLIDYNPAQEMSGAIAVAKRTHRPALPFDRFSELLERIESFKGRkltklavkltllIFI  238
             G    NPA E+++++A +K +H P L  D ++ +L ++  + G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFVNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELR A WSEIDF NA+WTIP  R             KM+  H+VPLSRQ  ++L+ +
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  REISGECDLVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
            + +SG+  LVF G  D+ KPMSE ++N  L+ +GYD      GHGFR    + L E G  
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLDE  402
              W    +E Q++H ++NS+R++Y H A  +D R+ M+QW ADY+D 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

432) ETEC_4481 in NC_017633


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  258 bits (963),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 161/386 (42%), Positives = 243/386 (63%), Gaps = 25/386 (6%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK  60
            ++LLV   G+RYWRL+YRI GKEK LALGVYP+VSL+EAR KRD+ARK+ISEG DP E+K
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   RVKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLNT  117
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237
             L    LP +L ++  Y G PVTR+A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENT  297
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  314  INMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLDANREQ  380
            H A  ++ RR M+QW AD++D+  EQ
Sbjct  368  H-ALYIDGRREMMQWYADYIDSLSEQ  392

433) BTH_I0928 in NC_007651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (959),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 166/396 (42%), Positives = 262/396 (67%), Gaps = 10/396 (2%)

Query  47   PLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSl  106
            +LT  +V  A+P E+ Y+L+D +GLYL V   G+RYWR+KYR+ GKEK  ++GVYP+VSL
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  107  aqarqaclaarkllaaGTDPTEQKREIKRARAIEASSSFEAVAREWFESQKDGWTEVYAN  166
            A+AR     ARK+++ G DP E+KR  K ++ I A+++F+A+A EW + +  +W+E YA 
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  167  KVINSLEVDAFPRIGSKPLRDIEAPDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMT  226
             V+++L+ D FP +G +++ DI + +MLEI+R IE RG  E  ++V Q    +F+Y+I T
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  227  GRCSRNPAADIDAETVLKKGQGVKHMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALT  286
            GR + NPA+++ +     K+    H +++++ E+P ++R +A Y G  VT++A  ++ LT
Sbjct  182  GRATVNPASELTSTLAAPKAA---HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  287  FTRTTEMINAEWDEFDERAAEWRIPPDRMKMRDPHIVPLSRQALEVLAALRELNGNQRLV  346
              RT E+ +AEW E+D   A W IP  RMKMR  H+VPLSRQ  ++L  L+ ++G+ RLV
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  347  FYSVQGRSHI----SNNTMLYALYRMGYKSRMTGHGFRGLAATVLRELGYSRDVVDRQLA  402
            F    GR +I    S+ ++   L R+GY +R TGHGFR   +T+L+E G++   ++ QLA
Sbjct  299  F---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLA  355

Query  403  HAERNQVTAAYVHAEYLPERRKMMQHWADYLTQTAN  438
            H ++N + ++Y HA Y+  RR MMQ  ADY+   ++
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

434) ETEC_3157 in NC_017633


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (961),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 161/386 (42%), Positives = 243/386 (63%), Gaps = 25/386 (6%)

Query  1    MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQK  60
            ++LLV   G+RYWRL+YRI GKEK LALGVYP+VSL+EAR KRD+ARK+ISEG DP E+K
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   RAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHSDKVLKSLETHVFPFIGNRDITTLST  117
            R  K+   +  +  F+ +A  WH  +   W++S +  VL +L+ ++FP++G+R +T +  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  118  PDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRP  177
             ++L  +R  E +   E   +++Q  + + RYA+ +G    NPA +++++L++ K  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  178  ALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAE  237
             L    LP +L ++  Y G PVTR+A  L LL  +R+ ELR A WSEID+DNA+WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  238  REPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAELQTWAGENGLIFTGAHDPRKPISENT  297
            R             KMR  H+VPLS+Q   IL +L+T +G+  L+F G  D  KP+SE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  298  VNKALRVMGYDTTQDVCGHGFRAMACSALIESGL---WSRDAVERQMSHQERNGVRAAYI  354
            +N  L+ +GYD      GHGFR    + L E G+   W    +E Q++H ++N++R++Y 
Sbjct  314  INMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLDANREQ  380
            H A  ++ RR M+QW AD++D+  EQ
Sbjct  368  H-ALYIDGRREMMQWYADYIDSLSEQ  392

435) YpsIP31758_0809 in NC_009708


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (961),  Expect = 6e-70, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 251/407 (62%), Gaps = 25/407 (6%)

Query  1    MALTDVKVRSAKTEDKPYKLTDSDGMHLLVHPNGSKYWRLRYRYLGKENTLALGVYPALS  60
            MALT  +V +A+  +K YKL+D  G+ LLV   G++YWRL+YR  GKE+ LALGVYP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARAKRDAARKLIAEGSDPSEVKRAKKALP--DATQTFEVIARRWHAANK-QWSEQHS  117
            L+EAR KRD ARK+I+EG+DP+E KR  K      AT+TF+ +A  WH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AKVLKNLEMYLFPVNGTRDIASLRTPDLLIPIRVAENAGFLEVSARLLQRTTAIMRYAVQ  177
              VL  L+  +FP  G R ++ +   ++L  +R  E+ G LE   ++ Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  CGIIDYNPAQDMVGALTTVKRVHRPALELNRIPELLSRIEGYKGQPLTRLAVMLNLFVFI  237
             G    NPA ++ ++L++ K  H P L  + +P +L ++  Y G P+TR+A  L L+  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDTERALWTIPAEREPIPGVKFSHRGSKMRTTHLVPLSQQSLAMLEEL  297
            R+ ELR A WSEID + ALWTIP  R             KMR  H+VPLS+Q   +L++L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  RLSGGESGLIFPGDHDPRKPISENTINKALRLMGYETKTEVCGHGFRAMACSALIESGL-  356
            +  +G+  L+FPG  D  KP+SE +IN  L+ +GY+ ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFLDT  401
              W    +E Q++H ++N++R++Y H A ++D RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

436) amb0488 in NC_007626


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (961),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 151/371 (41%), Positives = 247/371 (67%), Gaps = 7/371 (1%)

Query  25   GMFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPDVTIKTARQLRDDAKKQLANGIDPSDA  84
            G++LLV   + RYWRLKYR++GKEK LALGVYPDV++  AR  RDDA+K +++G DP++ 
Sbjct  25   GLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEK  84

Query  85   RKAKKSSQLLDGPDSFENVAREWFAKNVATWAETHSSKVLQRLESDVFPLIGTKPIGSIT  144
            ++  K +Q + + ++F+ +A EW   +  +W+E+ +  VL+ L+ D+FP +G +++  I 
Sbjct  85   KRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDIL  144

Query  145  APMILAVARKIEARGANDTAHRAVQNAGQIMRYAVATGRAERDPTGDLRGALPPVRHKHF  204
            +  +L + R+IE RG+ +  ++  Q   QI RYA+ATGRA  +P+++L ++L++ +  HF
Sbjct  145  PLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHF  204

Query  205  AALTDPKLVGELLRAFDAFEGTVVVKAALQLAPLVFVRPGELRKAKWADIDLDAGSWAFH  264
            + L    L   +LR +  ++G+ V + A +L  L  +R  ELR A W++ID+D + W++ 
Sbjct  205  PHLRADEL-PVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIP  263

Query  265  ASKARKGETIEHLVPLSTQAVEILRDLHQYTGNRECLFPGR-DPRKPMSEAAVNAALRRL  323
             S+ +      H+VPLS Q  +IL++L  ++G+   +FPGR D  KPMSEA++N  L+R+
Sbjct  264  ESRMKM--RRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRI  321

Query  324  GYDTKTEITGHGFRAMARTILAEQLGEDPHVIEQQLAHRVPDALGRAYNRTKYIEQRRAM  383
            GYD ++  TGHGFR    TIL EQ G ++  IE QLAH   +++  +YN++ YI+ RR M
Sbjct  322  GYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREM  378

Query  384  MQRWSDYLDTL  394
            MQ+ +DY+D+L
Sbjct  379  MQWYADYIDSL  389

437) intB in NC_009076


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (959),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 164/394 (42%), Positives = 262/394 (67%), Gaps = 8/394 (2%)

Query  1    MPLTDTAVKNAKPAAKPYKLTDGGGMYLLVQPNGAKYWRMAYRLHGKQKLLAIGVYPAVG  60
            M+LT   V  A+P  K YKL+D  G+YLLV+  GA+YWR+ YR+ GK+K LA+GVYP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LATARERRDDARKKVAAGIDPSAAKRVEKRVARLAASNTFEAVAHGWMNERKTVVEIGQY  120
            LA AR +RDDARK ++ G DP+  KR EK   +++A+NTF+A+A  W +++K++     Y
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESY  119

Query  121  EKT-LARFDSDVFPWLGKRPIAEVDAPEILTALKRIDSRGARYTAHRVRSEISRVFRYGI  179
             ++ L  +D D+FP LGKR+++++ + E+L  L+RI+ RG+    ++VR   +++FRY+I
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  KEGYCKADPARDLVDAIPPAQTTHFAAITDPAKVAEMLRAFDGFSGTFPVLCALKLAPLL  239
              G    +PA +L  ++++++++HF+ +  +  ++  LR +  + G+     A +L  L 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  240  FVRPGELRQAQWAQFDLDKGEWRYLVTKTKT--EHLVPLSLQAIAILRELHALTGAGRYV  297
             +R  ELR A+W+++D+D++ W    ++ K    H+VPLS Q   IL++L +++G  R V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  298  FPGARDRNRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLA  357
            FPG  D N+PMSEA+IN  L+R+GYD R+  TGHGFR    TILHE+   ++  IE QLA
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  358  HTVPDNLGSAYNRTKFIKKRREMMQKWADYLDCL  391
            H   +++ ++YN++ +I  RREMMQ  ADY+D L
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

438) YpsIP31758_3540 in NC_009708


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  257 bits (960),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 265/407 (66%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEEKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGIYPEIS  60
            MAL+  +V +A+P EK YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG+YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQSIGKRNITDLGTRDLLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR++TD+   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVDVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERKLMIQWWADFFGG  402
              W    +E Q++H ++NS+R++Y H A  +D R+ M+QW AD++++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

439) BUPH_02406 in NC_018695


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  256 bits (957),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 163/395 (42%), Positives = 253/395 (65%), Gaps = 3/395 (0%)

Query  1    MPLTVREVEAARPRPKPYGVADGDGLVLWVTPEGNKFWHFRYRLHGKQPRISLGRYPDVT  60
            M+LT R+VE+ARP+ K Y ++D  GL L V   G ++W+++YR+ GK+ +++LG YPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQKARQQAAAYRTLVADGADPRAKRRIDRQRADTSDDGTFRAAAELWYKSKRDAGRSAST  120
            L  AR +    R ++++G+DP  K+R ++     S   TF+A A  W + K   ++S S 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHK-SLSWSESY  119

Query  121  LDKIRTYLDKDILPELGSIKLVNITRADCARVQERFEKRDALNVSKKARGWLREIFSQAI  180
               +   LDKDI+P LG   + +I   +   +  R+EKR++L+  +K R    +IF  AI
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  181  ARGKCEFNPASELKVIAKPARKAKPYPHLLEPELPDFLRALEKSTSRLIAYVAAWMTIWT  240
            A G+   NPASEL   + +A KA  +PHL   ELP FLR L    +  ++ +A+ + + T
Sbjct  180  ATGRATVNPASELTS-TLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  ASRPGMVRYAEWTEVDLEAALWTISAEKMKMRRSHVTPLPSQLVKALRELKKLTGRHQYV  300
            + R   +R AEW+E+D++ ALWTI+  +MKMRR HV PL+ Q+   L++LK ++G+ + V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGIGTKHEIISENTINLVFSKIGYKGRMVGHGTRHTASTLLREHGWTKDHVESQLAHLE  360
            FPG    +  +SE +IN+V+ +IGY GR  GHG RHT ST+L+E+G     +E QLAH++
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  -EGIAGDYNHAKYLVQRRAMIQWYADYLDALKNDM  394
             ++I G YNHA Y+  RR M+QWYADY+D+L +++
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

440) A1122_08715 in NC_017168


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

441) YpAngola_A4051 in NC_010159


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 167/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVSTGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++++ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

442) YPA_2939 in NC_008150


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

443) intB in NC_003143


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

444) intB in NC_017154


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

445) intB in NC_017160


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

446) YPN_0651 in NC_008149


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

447) intB in NC_014029


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

448) intB in NC_005810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (953),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  13   MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  72
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  73   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  130
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  131  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  190
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  191  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  250
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  251  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  310
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  311  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  369
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  370  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  414
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

449) intB in NC_004088


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  255 bits (953),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 262/407 (65%), Gaps = 24/407 (5%)

Query  13   MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  72
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  73   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  130
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  131  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  190
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  191  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  250
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  251  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  310
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  311  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  369
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  370  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  414
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

450) Dd1591_3702 in NC_012912


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  254 bits (949),  Expect = 6e-69, Method: Compositional matrix adjust.
 Identities = 175/412 (43%), Positives = 265/412 (65%), Gaps = 24/412 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALT     TA+P+EK YKL+D +GLYLLV   G++ W LKYR+ GKE ++A+G YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAKAREKRDEVRLLLSEGIHPTEKREEEK-EQAQDAQNTFEKVARDWHRNISQNRWSQTH  119
            LA AR KRD+ R ++SEG +P EK+  EK  Q   A NTF+ +A +WH++ S + WS++ 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLS-WSESY  119

Query  120  AGRVWRDIERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
            A  V   ++++I+P +G+R ++D+   ++LE L+ +E+ G L+   ++RQ   +I RYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  QNDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLAQIERYkgraltrlalkltlCVF  239
              +    NPA +LT+++AAPKA+H P L+ D LP FL ++  Y G ++TR+A +L L   
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELR A W+EIDF  A+WTIP  R             KMR  H+VPLSRQ   +L++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  300  IKAISGVHELIFPGDHRPTKPMSENTINSALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            +K++SG   L+FPG     KPMSE +IN  L+ +GYD  +   GHGFR    + L E G 
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLEERKLMLQWWADYLDANREE  408
               W    +E Q++H ++N++R++Y H A  ++ R+ M+QW ADY+D+  E+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

451) BC1001_1934 in NC_015136


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  254 bits (948),  Expect = 7e-69, Method: Compositional matrix adjust.
 Identities = 163/395 (42%), Positives = 250/395 (64%), Gaps = 3/395 (0%)

Query  1    MPLTVREVEAARPRPKPYGIADGDGLVLWVTPEGNRFWHFRYRLHGKQPRISLGRYPDVT  60
            M+LT R+VE+ARP+ K Y ++D  GL L V   G R+W+++YR+ GK+ +++LG YPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQKARQQAASYRTLVADGADPRAKRRIDRQQADTNDDGTFKAAAEFWYKRKQDAGRSAST  120
            L  AR +    R ++++G+DP  K+R ++     +   TF A A  W ++K   ++S S 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHK-SLSWSESY  119

Query  121  LDKIRTYLDKDILPELGSIKLVNITRADCARVQERFEKRDALNVSKKARGWLREIFSQAI  180
               +   LDKDI+P LG   + +I   +   +  R+EKR++L+  +K R    +IF  AI
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  181  ARGQCEFNPASELKVIAKPARKAKPYPHLLEPELPDFLRALEKSTSRLIAYVSAWMTIWT  240
            A G+   NPASEL   + +A KA  +PHL   ELP FLR L    +  ++ +++ + + T
Sbjct  180  ATGRATVNPASELTS-TLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  241  ASRPGMVRYAEWTEIDLDGALWTISAEKMKMRRSHVTPLPSQLVTALRELKKLTGRHQYV  300
            + R   +R AEW+EID+D ALWTI+  +MKMRR HV PL+ Q+   L++LK ++G+ + V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  301  FPGIGTKHQVISENTINLVFSKIGYKGRMVGHGTRHTASTLLREHGWVKDHVETQLAHLE  360
            FPG    ++ +SE +IN+V+ +IGY GR  GHG RHT ST+L+E+G     +E QLAH++
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  EGTA-GDYNHARYLVQRRAMIQWYADYLDALKTGI  394
              +  G YNHA Y+  RR M+QWYADY+D+L   +
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

452) YPDSF_3248 in NC_009381


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 167/407 (42%), Positives = 261/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRHRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+ R+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

453) YPK_3676 in NC_010465


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  253 bits (946),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 170/412 (42%), Positives = 264/412 (65%), Gaps = 24/412 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWHASNR-QWSEAHS  118
            LA+AR +RD+ARK++++G DP+E K+  K+ Q   A  TF+ +A EWH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSRQALAILGKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL ++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADDLDANRQQA  407
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW AD +D+  +Q 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

454) GM21_0997 in NC_012918


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  253 bits (945),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 161/402 (41%), Positives = 265/402 (66%), Gaps = 14/402 (3%)

Query  6    LPLTDSQVTRAKSQAKEAKLYDGGGLYLLISAIKLDSSGKQLPPTKLWRFKYRFAGKEKL  65
            ++LT  QV  A+++ K+ KL D  GLYLL+ +            ++ WR+KYR+AGKEK 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKT----------TGARYWRLKYRIAGKEKK  50

Query  66   AAFGAYPSVSLSEARKRREEAKQLLVQGVDPNEEKKARKAALSSHCQNTFEAVAREWHSR  125
             A+G YP VSL+EAR +R++A++++ +G DP E K+  K +      NTF+A+A EWH +
Sbjct  51   LALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQH  110

Query  126  FKGNWSEKHAEQIMKRLEQEVFPFLGARPISEIKAPDLLLVLRQIEAR-TLETAHRVRIA  184
               +WSE  A  ++  L++++FP+LG R++++I + ++L +LR+IE R +LE  ++VR  
Sbjct  111  KSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY  170

Query  185  CGQVFRYAVATGRAEHDPVSMLRGALPPIKNNHFAAPVMPSDVGPLLKAIDGFKGSPIVK  244
            C Q+FRYA+ATGRA  +P S L ++L++ K  HF + + + ++  +L+ +  + GSP+ +
Sbjct  171  CNQIFRYAIATGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTR  229

Query  245  AAMQLAPHLFVRPGELRQAEWSEVDLQAGEWNIPAAKMKMGQPHLVPLSRqalqilqdlq  304
             A +L     +R  ELR AEWSE+D++ + W IP ++MKM + H+VPLSRQ  +ILQ+L+
Sbjct  230  MATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLK  289

Query  305  aiTGHGRYVFPCHRSRLRCMSENAVNAGLRRLGFEKHEITGHGFRAMARTILDEVLHFRP  364
            +++G+ R VFP +    + MSE ++N  L+R+G++ +  TGHGFR    TIL+E   F +
Sbjct  290  TFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNS  347

Query  365  DIIEHQLAHAVKDPLGRAYNRTSHLAERRRMMQQWSEFLDQL  406
              IE QLAH  K+++  +YN++  +  RR MMQ  ++++D L
Sbjct  348  AWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

455) G432_12985 in NC_020561


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 160/395 (41%), Positives = 264/395 (67%), Gaps = 12/395 (3%)

Query  1    MALKDTEIRAFRPLDKPYRKADSGGLYLEVFPNGSKLWRWKFRIAGKEKRLALGAYPAVS  60
            MAL   ++ + RP +K Y+ +D  GLYL V   G++ WR K+RIAGKEK+LALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKEARATRDDEKAKLLKGVDPALDRKRGKVAAKISAANTFAAVAHEYIDTKMVGESRADA  120
            L EAR  RDD +  +  G DP+  +++ K++ KISA+NTF A+A E  + K +  S++++
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSL--SWSES  118

Query  121  TISKARWFLEQLE----PAIGKMPIAEVDQQMLLAALMRVQMRGRYETAKKCRSFASRVF  176
                AR  LE L+    P +GK +++++    +L  L R++ RG  E  +K R + +++F
Sbjct  119  Y---ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIF  175

Query  177  RYGVVTGRCASDPAHLLQGALTTPQAKHYAAILEPAKLGELLRAIDTFTGSPVTKAALQI  236
            RY++ TGR + +PA  L ++L++P+A H++  L +  L  +LR +  + GSPVT+ A ++
Sbjct  176  RYAIATGRATVNPASELTSTLAAPKAAHFPH-LRADELPVFLRKLAEYHGSPVTRMATNL  234

Query  237  APHVFVRPGELRHAEWAEFNLEEGIWNLPAAKMKARRPHAVPLSRQVKQMLVELRTLTGS  296
                 +R  ELR AEW+E+++++++W +P ++MK RR H VPLSRQV ++L +L+T++G 
Sbjct  235  LLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQ  294

Query  297  GKYVFPSANGPSRPMSENTLNASFRRMGFDKDEVTAHGLRATASTLLNQSGLWNPDAIER  356
             + VFP+  + ++PMSE ++N  ++R+G+D +  T+HG+R T ST+L++ G+ N+  IE 
Sbjct  295  YRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGF-NSAWIEM  352

Query  357  ALAHGESNATRGAYHRGLYWDERVRMAQWWSDYLD  391
             LAH + N+ RG+Y+++LY D R  M QW +DY+D
Sbjct  353  QLAHVDKNSIRGTYNHALYIDGRREMMQWYADYID  387

456) Acry_2428 in NC_009484


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  253 bits (946),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 163/397 (42%), Positives = 260/397 (66%), Gaps = 9/397 (2%)

Query  1    MPLTDTAIRNAKPKDKAYKVADSQGLYLLVNPGGSKLWRVKYRINGTERKLSLGAYPEIT  60
            M+LT   +  A+PK+K YK++D +GLYLLV+  G++ WR+KYRI G E+KL+LG YP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARTARDAARKQLAHAVDPNAAKRQARIEASIRAGNTFASVADELIEKKG---REGRT  117
            LAEAR  RD ARK ++++ DP   KR+ ++   I A NTF ++A E  + K+    E+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AATLEKQRWLLKLLGQDFGKRPVADITPQELLHELKKHERRGRLETAKQLRAFAGQVFry  177
             + LE    L K +   +GKR+V+DI P E+L+ L++ E+RG LE  +++R +  Q+FRY
Sbjct  121  RSVLEA---LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  178  aaataraerdpaQLLQGALISPTVKHFAAITDTAQFGALLRAIDDYQGDPAVMYALKLTP  237
            A AT+RA  +PA  L ++L +P   HF+ +  + ++  +LR + +Y+G P    A +L  
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  238  HVFQRPGEIRQMEWVEIDFNKAVWTIPEAKMKMRQPHVVPLSKQALALLREMRGLSGTGR  297
                R  E+R  EW EIDF++A+WTIPE++MKMR+ HVVPLS+Q   +L++++ +SG  R
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  298  YVFPSVRTKARPISDNTVNAALRRMGYSKDQMTAHGFRTSASSLLNESGKWNPDAIERAL  357
             VFP+     +P+S+ ++N  L+R+GY  ++ T+HGFR + S++L+E G  N+  IE  L
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQG-FNSAWIEMQL  354

Query  358  AHMVPGIIRRIYNQSAYWAERVEMAQWWSNHLDQMKD  394
            AH+    IR  YN++ Y   R EM QW ++ +D + +
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

457) Dsui_1791 in NC_016616


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 168/398 (43%), Positives = 274/398 (69%), Gaps = 9/398 (2%)

Query  1    MALTELAIKASKPADKPYKVSDERGLFLLVNPNGSKYWRVKYRFLGKEKLLALGVYPEVS  60
            MALT   + +++P +K YK+SDERGL+LLV+  G++YWR+KYR+ GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKQarerrddarrllaNGVDPGFHKQATKMAMVANAANSFEAVAREWWAKKSVGWSASYS  120
            L +AR +RDDAR+++++G DPG  K+  K++   +A+N+F+A+A EW   KS++WS SY+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  NKVIRLFERDVFPWVGARPIADITAPEMLAVVRRIEARGVIETAHLALRVSGQAFRYAVV  180
              V+  +++D+FP +G R+++DI + EML ++RRIE RG +E  +   +   Q FRYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRAERSPVGDLRGALPPVKVSHFAAITEPEKVGELLRAIDAFSGTFVVLCALKLAPLFF  240
            TGRA  +P ++L ++L++ K +HF+ +  ++ +  +LR +  + G+ V   A +L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRPGELRHARWRDFDLERGEWRYLVT--KTQTQHLVPLATQAIGILRELYALTGRGDFVF  298
            +R  ELR A W ++D++ + W    +  K + +H+VPL+ Q  +IL++L +++G+  +VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PGR-DRANPMSGATINAALRRMGYNTQTDITGHGFRAMARTILAEELHVKPEVIEHQLAH  357
            PGR D  +PMS A+IN  L+R+GY+ ++  TGHGFR    TIL E+   ++  IE QLAH
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  358  RVPDNLGTAYNRTKFLKERRVMMQEW-ANYLDNLKENV  394
               +++  +YN++ ++  RR MMQ W A+Y+D+L E+V
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQV  393

458) YE105_C1329 in NC_015224


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 157/382 (42%), Positives = 246/382 (65%), Gaps = 3/382 (0%)

Query  1    MKLTDTKIRNAKPQEKAYQLQDGNGLYLDVRPSGVKTWRYRYWVTPTKDGRYTIGSYPAV  60
            M LT  ++  A+P+EK Y+L D  GLYL V+ +G + WR +Y+++  K+ + ++G YP V
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIA-GKEKKLALGVYPDV  59

Query  61   SLAEARKVREWAREQVKSGIVPKEAKATERDIAKAESANTFEIVAREWMAKKWDNWSVNT  120
            SLAEAR  R+ AR  +  G  P E K  E+   K  ++NTF+ +A EW   K  +WS + 
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  121  KNQIIAFMDNDIFPAIGGMPMREINASHILKIIRELENRGAISVAVKTRQWCSAIFCYGV  180
               ++  +D+DIFP +G  ++ +I + ++L I+R +E+RG++    K RQ C+ IF Y++
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  181  ATLRADSDPAAALKGAIITPKIVHSRSLTGDELRDYYLRLESYTGTRATIIALKILPLVF  240
            AT RA  +PA+ L +++ +PK  H   L +DEL  +  +L  Y G+  T +A ++L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRQVELRSAEWAHIDFDNAEWVIPAELMKMRRIHRVPLSKPVLSLLHELKELTGKRRWLF  300
            +R +ELRSAEW++IDFDNA W IP   MKMRR H VPLS+ V  +L++LK ++G+ R +F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  301  PN-TRLDTFMGASTLNWAIVHMGYGRKVLTTHDFRATASTRLHEMGYRHDVIERQLAHVE  359
            P    ++  M+ +++N  + ++GY+ +  T H+FR T ST LHE G+    IE QLAHV+
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  360  KNRVSAAYNHAEYMPERRELME  381
            KN + ++YNHA Y+  RRE+M+
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ  380

459) intB in NC_017265


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  252 bits (941),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 167/407 (42%), Positives = 261/407 (65%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+  +V TA+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQEAI-TFEVVAREWYASNR-QWSEAHS  118
            LA+AR +RD+ARK +++G DP+E K+  K+ Q   A  TF+ +A EW   +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              VL +L+ ++F  +GKR+++D+   ++L  ++ +E  G L+   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A+ K  H + L  + ++ +L+++  Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H++PLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

460) KPK_1811 in NC_011283


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  252 bits (942),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 164/408 (41%), Positives = 267/408 (66%), Gaps = 26/408 (6%)

Query  1    MSLTDAKIRTLKPSDKPFKVSDSHGLYILVKPGGSRHWYLKYRINGKESRLGLGAYPNVS  60
            M+LT  ++ T +P +K +K+SD +GLY+LVK  G+R W LKYRI GKE +L+LG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LTDARQQRDDIRKLLAQKINPAQQRLTEKAAR--SPEKAFKAVALNWHKSNK-TWSEDHA  117
            L++AR +RDD RK++++  +P++++  EK ++  S+ ++F A+A +WH+ +  +WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  NRVLGRMNNHIFPIIGHLTVTELKVQHFINLLKGVENKGLLEIASRTRQYISSIMRHALH  177
              VL  ++++IFP +G  +VT++   + +++L+ +E++G LE   + RQY + I R A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEHNPAADLKGVTVPPIKRHYPAlplerlpellkrIDDYKQGRELTQLAIMLSLHVF  237
             G    NPA++L +   +P   H+P L  + LP +L+++ +Y +G  +T++A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLTG  239

Query  238  IRSSELRFARWPEINFRNRLWTIPATRETIPNVRNSGRGAKMRAQHIVPLSQQAIDILKQ  297
            +R+ ELR A W+EI+F N LWTIP +R             KMR +H+VPLS+Q  DIL+Q
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IREISGDQVLIFPSIRDPYKPMSENTINKALRLMDYDTKEDVCGHGFRAMACSALIESGL  357
            ++ +SG+  L+FP+  D  KPMSE +IN  L+ ++YD +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSEDAIERQMSHQERNSVRAAYIHKAEHLEARKAMMQWWSDYIDE  402
               W    IE Q++H ++NS+R++Y H A  +++R+ MMQW +DYID 
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

461) NAL212_2545 in NC_015222


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 174/396 (44%), Positives = 269/396 (68%), Gaps = 2/396 (0%)

Query  1    MKLTDTAIKKAKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVT  60
            M LT   +  A+P+ K Y+++D  G+Y+ VK  GA+YWR+ YR+A+K+K LALGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARDRRNEARKLLANGADPGAVkqsqkkqakiaasnsFELIAREFHSLKTPMWSTNHA  120
            LA+AR +R++ARK++++G+DPG  K+ +K   KI+A+N+F+ +A E H  K+  WS + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  ADWIKTLEREIFPKFGNYPISEIDAPAVLDAIRAIESRDAHEvaarvlqrvravcaYAIA  180
               + +L+++IFP +G+ ++++I +  +L+ +R IE R++ E   +V Q    +  YAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRARHNPASEIKGALAPQPKIKHFAALTEKELPDFLRAVAAYPCYPLTKYATALLMLTF  240
            TGRA  NPASE+ ++LA+ PK  HF+ L   ELP FLR +A Y   P+T+ AT LL+LT 
Sbjct  181  TGRATVNPASELTSTLAA-PKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRTGEVRGAKWCEFDLDAKLWKIPAERMKSREPHIVPLAKQAIEILGELHPLTGHGEHLF  300
            +RT E+R+A W E+D+D  LW IP  RMK R  H+VPL++Q  +IL +L  ++G+   +F
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  301  PNRTGNGKVISENTVLKVIERLGYKGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTE  360
            P R +  K +SE ++  V+ R+GY GR TGHGFR   ST L+  G + +  IE QLAH +
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  361  anatraaynranyMEYRAAMMQFWADTLDAMEAGIT  396
             N+ R++YN+A Y++ R  MMQ  AD +D++   ++
Sbjct  359  KNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

462) Pput_3353 in NC_009512


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  251 bits (938),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 158/385 (42%), Positives = 250/385 (65%), Gaps = 6/385 (1%)

Query  1    MALTDTAARQAKPREKGYTLADSLGLTLYVAETGVKSWHFRFTWLGKQARISLGTYPEIG  60
            MALT      A+P+EK+Y L+D  GL L V  TG + W++++   GK+ +++LG YP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKeararrdearedVAQGKDPRESRREKKVERLGAKERTFRRVYEEWLEFRKGGLTESTV  120
            L EAR +RD+AR  +++G DP E +R  K+ +  +   TF+ +  EW + +  + +ES  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  KVISNAMELDVLPAFGLRQIDSIKRADVITLIRRIERRGSITTAVKTRQWIGQVFRYAVA  180
            + + +A++ D++P +G R +  I   +++ ++RRIE+RGS+    K RQ   Q+FRYA+A
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  IGMIEINPTAEMHAVTEKMAPHKNRPF--LAFTEMPAIIKAIEESQSGLQLQCATKLLIL  238
             G   +NP++E+   T  +A+ K   F  L   E+P +++ + E +++   + AT+LL+L
Sbjct  181  TGRATVNPASEL---TSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  239  TACRPAEVRKAEWSEIDLDTATWSIPASKMKMRRDHVVPLSRQAVELLRSMLPISGGLKY  298
            T+ R  E+R AEWSEID+D A W+IP S+MKMRR HVVPLSRQ  ++L+ +  +SG  + 
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  299  VFPNRTDAVRPIGINYAVNLLDRCGYTGRQSPHGFRHLFSTEMNSRGYNKDWIERQLAHA  358
            VFP R D  +P++      +L R GY GR + HGFRH  ST ++ +G+N  WIE QLAH 
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  359  DSSAIRDVYNHATYLEQRRDMMQAW  383
            D ++IR+ YNHA Y++ RR+MMQ W
Sbjct  358  DKNSIRGTYNHALYIDGRREMMQ-W  381

463) Dd703_3541 in NC_012880


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 175/412 (43%), Positives = 263/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALT     TA+P+EK YKL+D +GLYLLV   G++ W LKYR+ GKE ++A+G YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAKAREKRDEVRLLLSEGIHPTEKREEEK-EQAQDALNTFEKVARDWHRNISQNRWSQTH  119
            LA AR KRD+ R ++SEG +P EK+  EK  Q   A NTF+ +A +WH++ S + WS++ 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLS-WSESY  119

Query  120  AGRVWRDMERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
            A  V   ++++I+P +G+R ++D+   ++LE L+ +E+ G L+   ++RQ   +I RYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  QNDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLARIECYkgraltrlalkltlCVF  239
              +    NPA +LT+++AAPKA+H P L+ D LP FL ++  Y G ++TR+A +L L   
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELR A W+EIDF  A+WTIP  R             KMR  H+VPLSRQ   +L++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  300  IKAISGAHELVFPGDHRPIKPMSENTINSALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            +K++SG   LVFPG     KPMSE +IN  L+ +GYD  +   GHGFR    + L E G 
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVARQMSHQEHNGVRAAYIHKAEHLEERKLMLQWWADYLDANREE  408
               W    +  Q++H + N++R++Y H A  ++ R+ M+QW ADY+D+  E+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

464) BPC006_I1487 in NC_018527


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 160/387 (42%), Positives = 258/387 (67%), Gaps = 8/387 (2%)

Query  1    MKNAKPAAKPYKLTDGGGMYLLVQPNGAKYWRMAYRLHGKQKLLAIGVYPAVGLATARER  60
            +  A+P  K YKL+D  G+YLLV+  GA+YWR+ YR+ GK+K LA+GVYP V+LA AR +
Sbjct  8    VETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIK  67

Query  61   RDDARKKVAAGIDPSAAKRVEKRVARLAASNTFEAVAHGWMNERKTVVEIGQYEKT-LAR  119
            RDDARK ++ G DP+  KR EK   +++A+NTF+A+A  W +++K++     Y ++ L  
Sbjct  68   RDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESYARSVLEA  126

Query  120  FDSDVFPWLGKRPIAEVDAPEILTALKRIDSRGARYTAHRVRSEISRVFRYGIKEGYCKA  179
            +D D+FP LGKR+++++ + E+L  L+RI+ RG+    ++VR   +++FRY+I  G    
Sbjct  127  LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATV  186

Query  180  DPARDLVDAIPPAQTTHFAAITDPAKVAEMLRAFDGFSGTFPVLCALKLAPLLFVRPGEL  239
            +PA +L  ++++++++HF+ +  +  ++  LR +  + G+     A +L  L  +R  EL
Sbjct  187  NPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIEL  245

Query  240  RQAQWAQFDLDKGEWRYLVTKTKT--EHLVPLSLQAIAILRELHALTGAGRYVFPGARDR  297
            R A+W+++D+D++ W    ++ K    H+VPLS Q   IL++L +++G  R VFPG  D 
Sbjct  246  RSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDI  305

Query  298  NRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDNL  357
            N+PMSEA+IN  L+R+GYD R+  TGHGFR    TILHE+   ++  IE QLAH   +++
Sbjct  306  NKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSI  362

Query  358  GSAYNRTKFIKKRREMMQKWADYLDCL  384
             ++YN++ +I  RREMMQ  ADY+D L
Sbjct  363  RGTYNHALYIDGRREMMQWYADYIDSL  389

465) int in NC_015761


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  250 bits (933),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 167/407 (42%), Positives = 251/407 (62%), Gaps = 25/407 (6%)

Query  6    MSLTDTAIRKLRPTDKPFKLGDSAGLYLLIKPNGSKLWYMKYRIDGKEKKLAFGPYPDVS  65
            M+LT   +   RP +K +KL+D  GLYLL+K  G++ W +KYRI GKEKKLA+G YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  66   LLTARQLRDAARIKMREGVDPSVDKKIAQ--QKKKNGQTFRQIAINWHADHR-RWSEHYA  122
            L  AR  RD AR  + EG DP+  K+  +  QK    +TF+ +A +WH +    WSE YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  123  TTIRRRLEMYIFPDIGDRYIDQIVTEDLLFTLRKVENKGFLEITARLKNYVTEIMRYAVK  182
             ++   L+  IFP +G R + +I+  ++L  LR++E++G LE   ++++Y  +I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  183  KQLIRSNPALDLDGEFTPPETQHYPAlpleklpellSRTDNYSGRLLTRYALKLSLLFFV  242
                  NPA +L + +++P + H+P L  + LP +L +  +Y G  +TR A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  243  RSSELRFARWSEIDWQQKLWIIPEEREQIENVRFSHRGTKMKTQHIVPLSDQAMAILKQT  302
            R+ ELR A WSEID ++ LW IPE R             KM+ +H+VPLS Q   IL+Q 
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  303  EALSGHLAFIFPGEYDQDKCMSDNTISKALRVMGYDTRKEICGHGFRAMACSALSESGL-  361
             ++SG+  ++FPG  D +K MS+ +I+  L+ +GYD R    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGFN  346

Query  362  --WSKEAIEKQMSHQERNSVRAAYIHKAEYLEERINMMQWWADYLDA  406
              W    IE Q++H ++NS+R++Y H A Y++ R +MMQW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

466) PAU_03981 in NC_012962


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  250 bits (933),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 165/409 (41%), Positives = 260/409 (64%), Gaps = 29/409 (7%)

Query  1    MKLNARQIETAKPKDKAYKLADGGGLYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPV  60
            M L ARQ+ETA+PK+K YKL+D  GLYL +   G++YWR+KYR +   KE +LA+GVYP 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   ISLadarakrdeakkLIASGVDPKATQKEAQ--AEVSGEFNFETIARKWHASNK-RWGD-  116
            +SLA+AR KRD+A+K+I+ G DP   ++  +    +S+   F+++A  WH  +   W++ 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  117  YNRARVLRSLEQYIFPHIGKVDVRQLKTSHLLAPIRVVDDAGKHDVAQRLQQRVTAIMRY  176
            Y R+ VL +L++ IFP +GK  V ++   ++L  +R ++  G  +  ++++Q    I RY
Sbjct  119  YARS-VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  177  AVQNDIIDSNPAIDMAGALTMPKTKHYPALPSNCFPELLERINRYCGRKITRLAVVLTLL  236
            A+  +    NPA +++++L+ PK+ H+P L ++ +P +L ++  Y G  +TR+A  L LL
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  237  TFVRSSELRFARWDEIDFDISVWQIPGQRNPIEGVRYSYRGMKMKSAHIVPLSNQAIDVL  296
            T +R+ ELR A W EIDFD ++W IP  R            MKM+  H+VPLS Q  D+L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDIL  285

Query  297  QQLKELSGDNELLFPGDHDPNKVMSENTVNNALRVMGYDTKTEVCGHGFRAMACSALVES  356
            QQLK +SG+  L+FPG  D NK MSE ++N  L+ +GYD ++   GHGFR    + L E 
Sbjct  286  QQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ  343

Query  357  GL---WSKDAVERQMSHTERNGVRAAYIHTSEHLEERRLMIQWWADYLD  402
            G+   W    +E Q++H ++N++R++Y H+   ++ RR M+QW ADY+D
Sbjct  344  GFNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYID  387

467) SJA_C1-03340 in NC_014006


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  250 bits (932),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 164/401 (41%), Positives = 267/401 (67%), Gaps = 11/401 (2%)

Query  1    MALSSLALSKAKPREKPYKLADGHGLYLLITPGGGRYWRMNYRFGGKAKTMAMGVFPLIT  60
            MAL++  +  A+P+EK YKL+D +GLYLL+   G+RYWR++YR++GK K +A+GV+P ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearekrdaarkllaaGSDPtatrkeaeareafeattGFRTVAEEWLAKRE---REGLG  117
            LAEAR KRD ARK+++ G+DP   ++     + + AT  F+++A EW   +     E+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  AVTLGKVKWLLEFAYPSLGNRKISEITSMELLAVLRQVEGRGRHETARRLRSVCGRVFRY  177
               L  +       +P LG+R +++I ++E+L +LR++E RG  E  R++R  C ++FRY
Sbjct  121  RSVLEALD---KDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  178  AIATGRAEHDLSANLRDALTTPKVKHLAAITNSQQVGPLMRAIETFDGHAVTRAALRLAP  237
            AIATGRA  + +++L  +L++PK  H++ +  ++++  ++R +  ++G +VTR A  L  
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHL-RADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  238  HVFVRPGELRHAEWAEIDFDKALWCIPAEKMKMRRPHRVPLSRQSLAIFASIREITGTGK  297
               +R  ELR AEW+EIDFD+ALW IP  +MKMRR H VPLSRQ   I+  ++ ++G  +
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  298  FVFPGFQSLKRPMSENALNGALRRLGYSGDEMTSHGFRAMASTLLNEMGRWHPDAIERQL  357
            +VFPG   +++PMSE ++N  L+R+GY G   T+HGFR   ST+L+E G  ++  IE QL
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQG-FNSAWIEMQL  354

Query  358  AHAEADAVRRAYARGEYWDERVAMMQAW-SDYLDDLAGKPP  397
            AH + +++R +Y ++ Y D R  MMQ W +DY+D L+ + +
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSLSEQVS  394

468) Bcep1808_2451 in NC_009256


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  249 bits (931),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 172/396 (44%), Positives = 264/396 (67%), Gaps = 10/396 (2%)

Query  1    MALTDLKVRTAKPADKQQKLYDGAGLLLLITPAGGKRWIFKYRIDGKEKSLALGTYPDVS  60
            MALT  +V TA+P +K+ KL D  GL LL+  +G++ W +KYRI GKEK LALG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaeararrdsareKLAAGVDPSEakkadkraaqlaaaSSFEIVAREWFETQRGGWSEVYA  120
            LAEAR +RD AR  ++ G DP+E K+ +K + +++A+++F+ +A EW + +  +WSE YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  GKVINCLEVDVFPRLGARPIANIDAPELLAIIRAVESRGVRETAKRVLQRSRAVFQYGIM  180
              V++ L+ D+FP LG R++++I + E+L I+R +E RG  E  ++V Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCSRNPAADIDAETVLKKSTGVQHMARVKVTEIPQLMRDIDEYSGDLVTRLALRFMAL  240
            TGR + NPA+++ +     K++   H ++++  E+P ++R + EY G  VTR+A  ++ L
Sbjct  181  TGRATVNPASELTSTLAAPKAA---HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTKEMIQAEWHEIDVGAAEWRVPAERMKMRDPHIVPLSRQALDVLAQLREINGQRRF  300
            T +RT E+  AEW EID + A W +P  RMKMR  H+VPLSRQ  D+L QL+ ++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYALYRMGYKSRMTGHGFRGLAATTLRELGYSRDVVERQM  356
            VF    GR +I    S+ ++   L R+GY +R TGHGFR   +T L+E G++   +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERRKMMQHWADHLDELP  392
            AH ++N + ++Y HA Y+  RR MMQ  AD +D L+
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLS  390

469) Vapar_2301 in NC_012791


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  249 bits (930),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 157/380 (42%), Positives = 254/380 (67%), Gaps = 18/380 (4%)

Query  22   ADGGGMYLRVKAAG-KYWRMDYRFNGKAKTLALGVYPAVSLAKARQRRDKARELLADNVD  80
            +D  G+YL VK++G +YWR+ YR+ GK K LALGVYP VSLA AR +RD AR ++++  D
Sbjct  21   SDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGD  80

Query  81   PGLAKRAEKLSRAVEAANTFEALAREFHATKASSWSASYSERWMRIMDKDLFPYIGKLPI  140
            PG  KR EKL++ + A+NTF+ALA E H  K+ SWS SY+   +  +DKD+FPY+GK ++
Sbjct  81   PGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSV  140

Query  141  ATIQAKDLLHALKRAESRGVIETAHTLRQCAGQVFRYGVQTGRCASNPAPDLHGALRPVI  200
            + I + ++L+ L+R E RG +E  + +RQ   Q+FRY++ TGR + NPA++L ++L +  
Sbjct  141  TDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPK  200

Query  201  TKSMAAVLEPQKVGELMRAIYGYSGQPITRAA---LLLSALLFQRPGNIRAMEWAWIDLD  257
            +   +  L ++ +  ++R +  Y G P+TR A   LLL++L   R  ++R+ EW+ ID+D
Sbjct  201  AAHFPH-LRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL---RTIELRSAEWSEIDFD  256

Query  258  KAMLTIPAQDMKRRLHEKRNGRPHFVPLAKQALQTLEEIAPLTGHGRYVFPSIRTGERPM  317
            +A+ TIP   MK R       R H VPL++Q  + L+++  ++G+ R VFP+    ++PM
Sbjct  257  NALWTIPESRMKMR-------RKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPM  309

Query  318  SENTVNAALRRLGYTNDEMTAHGFRAMARTVMAEQLHGISPDVIEAQLAHGKSGPLGAAY  377
            SE ++N  L+R+GY ++  T+HGFR    T++ EQ  G+++  IE QLAH    ++ ++Y
Sbjct  310  SEASINMVLKRIGY-DGRATGHGFRHTMSTILHEQ--GFNSAWIEMQLAHVDKNSIRGTY  366

Query  378  DRAEFMDKRKDMMQRWADYL  397
            ++A ++D R++MMQ+ ADY+
Sbjct  367  NHALYIDGRREMMQWYADYI  386

470) Dd586_1478 in NC_013592


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  249 bits (928),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 164/408 (41%), Positives = 263/408 (65%), Gaps = 28/408 (6%)

Query  1    MSINDSKIRNLKPSTKPYKVSDSHGLYLLINPGGSRLWYLKYRINRKESRLGLGTYPDVS  60
            M++   ++   +P  K YK+SD +GLYLL++  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDSIRKLLAQNINPAHQQAAEKAPR--SPEKSFRDVALDWHKSNR-TWSESHA  117
            LA+AR +RD  RK++++  +P++++  EK  +  S+ ++F+ +A +WH+ +  +WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  TRLLASMNNHLFPVIGHLPVTELKPRHFISLLRGIEKKGLLEVAARTRQHLCN-IMRHAV  176
              +L ++++++FP +G  +VT++ P + + +LR IEK+G LE   + RQ  CN I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIEHNPAANLDGIIASPVKRHYPAlpleqlpellTRIEDYRQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  ++LP +L ++ +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNHIWTIPATRKAIPGVRYSGRGAKMRTPHIVPLSRQAIAILR  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQ  286

Query  297  QIQEISGHQVLIFPGAHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESS  356
            Q++ +SG+  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E +
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

471) Bamb_2400 in NC_008390


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (926),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 174/395 (45%), Positives = 265/395 (68%), Gaps = 10/395 (2%)

Query  1    MALTDLKVRTAKPAEKQQKLYDGGGLLLLITPAGGKRWVLKYRVDSKEKSLALGTYPDVS  60
            MALT  +V TA+P EK+ KL D  GL LL+  +G++ W LKYR+ +KEK LALG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaeararrdnareKLAAGVDPSEakkadkraaqlaaaSSFEIVAREWFDTQRGGWSEVYA  120
            LAEAR +RD+AR  ++ G DP+E K+ +K + +++A+++F+ +A EW + +  +WSE YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  GKVISCLEVDVFPRLGARPIASIDAPELLAIIRTVESRGVRETAKRVLQRSRAVFQYGIM  180
              V+  L+ D+FP LG R+++ I + E+L I+R +E RG  E  ++V Q    +F+Y+I 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCARNPAADIDAETVLKKSTGVQHMARVKATEIPRLMRDIDEYSGDLVTRLALRFMAL  240
            TGR + NPA+++ +     K++   H ++++A E+P ++R + EY G  VTR+A  ++ L
Sbjct  181  TGRATVNPASELTSTLAAPKAA---HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTKEMIQAEWPEIDVDAAEWRVPAERMKMRDPHIVPLSRQALGVLAQLREINGQQRF  300
            T +RT E+  AEW+EID D A W +P  RMKMR  H+VPLSRQ  ++L QL+ ++GQ R+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  301  VFYSVQGRSHI----SNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGYSRDVVERQM  356
            VF    GR +I    S+ ++   L R+GY +R TGHGFR   +T L+E G++   +E Q+
Sbjct  298  VF---PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERNQVTAAYVHAEYLPERREMMQHWADRLDEL  391
            AH ++N + ++Y HA Y+  RREMMQ  AD +D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

472) Bamb_1839 in NC_008390


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 160/398 (41%), Positives = 255/398 (65%), Gaps = 7/398 (1%)

Query  1    MPLTDIKIRQAKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTS  60
            M+LT  ++  A++ +K  KL+D  GLYLLVK +G++ WR KYRIAGKE+ +A+G YP  S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LQAARVARDDARELVKKGLHPSH-ARQEVLSARINEGKATFRAVSDEWLEKKRKTWTERH  119
            L  AR+ RDDAR ++  G +P++  R+E L+ +I+ +  TF+A++ EW + K  +W+E  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKIS-ATNTFHALATEWHQHKSLSWSESY  119

Query  120  FGEILRMLEADAYPYIGNRPMRSITAHDVLALMRRVEKRGSPSVAIKLRQYVSNVFQYAV  179
               +L  L+ D +PY+G+R++  I + ++L ++RR+EKRGS     K+RQY +++F+YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  ITLRADTDPASVLRGAVLKPPTEHARPLSREELKALFRQLPLYKSKRTT-IAIRLLMMLF  238
             T RA  +PAS L +++  P + H   L  +EL  ++R+L+ Y +   T +A  LL++  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  239  PRTVELCRARWEEIDLAAAEWRVPPEKIKSRRLHIVPLPTQAISLLRELQEIHGNRGYIL  298
             RT+EL  A W EID+  A W +P  ++K RR H+VPL+ Q   +L++L+ + G+   ++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PILHSNRKRPHMSRATINRALDSMMPNNPEPITGHDFRATASTNLHEMGWKDEVVEMQLS  358
            P  + + ++P MS A+IN  L  +        TGH+FR T ST LHE G +   +EMQL+
Sbjct  300  PG-RCDINKP-MSEASINMVLKRI--GYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLA  355

Query  359  HKDKDRTRSTYNHAKYLPERREMMQSWADWLSDVENDA  396
            H DK+  R+TYNHA Y+  RREMMQ  AD +  + ++ 
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQV  393

473) SFxv_4606 in NC_017328


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 161/399 (41%), Positives = 258/399 (65%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELR A WSEIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A  ++ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQ  380

474) S4839 in NC_004741


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 161/399 (41%), Positives = 258/399 (65%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELR A WSEIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A  ++ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQ  380

475) SF4224 in NC_004337


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 161/399 (41%), Positives = 258/399 (65%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELR A WSEIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A  ++ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQ  380

476) THI_2314 in NC_014145


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 145/360 (41%), Positives = 245/360 (69%), Gaps = 8/360 (2%)

Query  39   RWWRFDYRHGGKDKTLSVGVYPDVTLARARQRADEIRQQLLDGIDPSAA-RKSKVTGVVT  97
            R WR+ YR +GK+K L++GVYPDV+LA AR + D+ R+ + +G DP+   RK K+T  ++
Sbjct  36   RYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKIS  95

Query  98   GEVSDSFEIIAREWHAGRAPTLSGNTSKNILLRLQNNAFPYIGQKSVRELRAPDVLDVLR  157
            +  +++F+ +A EWH  ++ + S + ++++L  L+++ FPY+G++SV ++ + ++L++LR
Sbjct  96   A--TNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILR  153

Query  158  RIEARGLGETARRVHQLIAQVMRYAVATGRTDADPTPALRGALKPVMVRHHAAVIEPVEL  217
            RIE RG  E  R+V+Q   Q+ RYA+ATGR+  +P++ L ++L +    H +  + + EL
Sbjct  154  RIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPH-LRADEL  212

Query  218  GAMLRAFEGYSGGVVVRTALQLQVMLFVRPGELRHMEWAELDLDGAQWRIPGERMKMREP  277
               LR +  Y G+ V R A +L ++  +R  ELR  EW+E+D+D A W IP  RMKMR  
Sbjct  213  PVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRK  272

Query  278  HIVPLPQQAVALLKDLQPFSSRSRYVFPSPRSKDRPMSENAVNVALRALGFDRDTVTGHG  337
            H+VPL++Q   +L++L+ FS++ R VFP+    ++PMSE ++N+ L+ +G+D +  TGHG
Sbjct  273  HVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHG  331

Query  338  FRATARTILDEHLRYRVEVIEMQLAHAVRDPLGRAYNRTKYLEERKDMMQAW-AGYLDKL  396
            FR T  TIL+E+  +    IEMQLAH  ++++  +YN++ Y++ R++MMQ W A+Y+D L
Sbjct  332  FRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

477) MU9_135 in NC_020418


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (925),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 178/412 (44%), Positives = 272/412 (67%), Gaps = 24/412 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V T G++YWRL+YR++GK+K LALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaearekrdaarkLIANGFDPSekrkevk-eeqqkeFNTFEKVARDWHATNK-KWSEGHS  118
            LAEAR KRD ARK+I++G DP+EK++  K  ++    NTF+ +A +WH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  HRVLKSLEDNIFTAIGKRNIAELKTRDLLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQ  178
            + VL +L+ +IF  +GKR+++++   ++LE ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLQRIDDYKGRPltklavkltllvFI  238
            +G    NPA ++++++A+ K  H + L    LP FL+++ +Y G P+T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQI  298
            R+ ELR A W EIDF+NA+WTIP  R             KMR  H+VPLSRQ  +IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              FSG+  L+F G  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDERRLMVQWWADYLDANLEQT  407
              W    +E Q++H ++NS+R++Y H A  ID RR M+QW ADY+D+  EQ 
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

478) Dda3937_00080 in NC_014500


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (925),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 164/408 (41%), Positives = 264/408 (65%), Gaps = 28/408 (6%)

Query  1    MSLNDSKIRNLKPSAKPFKVSDSHGLYLLVNPGGSRLWYLKYRINRKESRLGLGTYPDVS  60
            M+L   ++   +P  K +K+SD +GLYLLV+  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLAQNINPAHQRAAEKASR--SPEKSFRDVALDWHKSNR-TWSENHA  117
            LA+AR +RD+ RK++++  +P++++  EK ++  S+ ++F+ +A +WH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  TRLLASMNNYLFPVIGHLPVTELKPRHFIDLLRGIEKKGLLEVASRTRQHLCN-IMRHAV  176
              +L ++++ +FP +G  +VT++ P + +++LR IEK+G LE   + RQ  CN I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIEHNPAANLDGIIATPVKRHYPAlpleqlpellTRIEDYRQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  ++LP +L ++ +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNNIWTIPATRKAIPGVRYSGRGAKMRTPHIVPLSRQTIAILR  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRM------------KMRRKHVVPLSRQVTDILQ  286

Query  297  QIQEISRHQVLIFPGAHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESG  356
            Q++ +S +  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQG  344

Query  357  L---WSQDAVERQMSHQERNSVRAAYIHKAQYLDARKAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

479) SARI_03082 in NC_010067


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 166/407 (41%), Positives = 256/407 (63%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMFLLVKPNGSRYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G++LLVK  G+RYWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADarkkreearrLVAAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++AR++++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVETSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGVIDYNPAQERAGAVASSNRQHRPALELKRIPELLEKIDGYIGRPLTRWATELTLLIFI  238
            +G    NPA E ++++A+++  H P L    +P +L K+  Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELCFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ EL  A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMEHNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H++ NS+R++Y H A  +D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

480) CFSAN002050_16945 in NC_021818


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 164/408 (41%), Positives = 260/408 (64%), Gaps = 28/408 (6%)

Query  1    MSLSDAKIRSIKPSDKPFKLTDSQGLYLLVNPGGSRLWYLKYRFNRKESRIALGAYPQVS  60
            M+L+  ++ + +P +K +KL+D +GLYLLV+  G+R W LKYR+  KE ++ALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQRDGIRKLLAQNINPAQQRMTEKAA--ASPEKCFEAVAVAWHKTNK-KWSADYA  117
            L++AR +RD+ RK++++  +P++++  EK +   S+ + F+A+A  WH+ +   WS  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ERILASMKNHIFPAIGHLPVTMLKTQHFTALLKVIEDKGFLEVASRTRQQLCN-IMRYAV  176
              +L ++ ++IFP +G  +VT +   +   +L+ IE +G LE   + R Q CN I RYA+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVR-QYCNQIFRYAI  179

Query  177  QQGLTESNPAQHLEGVTAPPVKNHYPAlplerlpelferIGDYQQGRQLTRLAVVLTLHL  236
              G +  NPA +L +  A+P   H+P L  + LP ++ ++++Y +G  +TR+A  L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNKIWTIPATRETIEKVRFSGRGAKMRTPHIVPLSRQAIAILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIKEISGHLELVFPGDHNPYKPMSENTINRALRLMGYDTKTDVCGHGFRTMACSALVESE  356
            Q+K +SG+  LVFPG  +  KPMSE +IN  L+ +GYD ++   GHGFR    + L E  
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WSRDAVERQMSHQERNSVRAAYIHRAEHLDARKDMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A  +D+R++MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

481) SFV_4227 in NC_008258


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  248 bits (926),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 161/399 (41%), Positives = 257/399 (65%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR+ GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELR A WSEIDF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A  ++ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQ  380

482) ELI_09990 in NC_007722


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  247 bits (923),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 166/401 (42%), Positives = 256/401 (64%), Gaps = 14/401 (3%)

Query  1    MVLTDVGIRKAKAGPKAYKLSDSSGLFLLVERTGGKLWRMKYRIDGREKKLAIGRYPEIG  60
            M LT   +  A++  K YKLSD  GL+LLV  TG++ WR+KYRI G+EKKLA+G YP+++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laearrrrdaareqlaqGKDPSREKQRQKARAKLGAENNFASLAAEFCEKRKHDGSRAWA  120
            LAEAR +RD AR  +++G DP+  K+++K   K++A N F +LA+E    + ++ S +W+
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATE----WHQHKSLSWS  116

Query  121  PATAKRCEYLLSVLNSSI----GHLPIADIEPADILTAVRRIESKGKLESAKRTLQLAGS  176
             + A+    +L  L+  I    G  +++DI P ++L  +RRIE +G LE  ++  Q    
Sbjct  117  ESYARS---VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQ  173

Query  177  VFRYAVATARLKSDPTRDLRGALMNPTVTHYGAVLDPAGAGELLRAIDGYEGQPITKLAM  236
            +FRYA+AT+R   +P+ +L ++L  P  +H+ + L +     +LR +  Y+G P+T++A 
Sbjct  174  IFRYAIATGRATVNPASELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMAT  232

Query  237  QLAPHVFVRPGELRHAEWSEIDFDEALWTIPASKTKMRKDHLVPLSRQAIAILEMAHRLT  296
            +L     +R  ELR AEWSEIDFD+ALWTIP S+ KMR+ H+VPLSRQ   IL+    ++
Sbjct  233  NLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFS  292

Query  297  GPDGYVFPSVRTRKRPMSDNTINAGLRRLGYATDEMTAHGFRAMASTLLNESGKWNPDAI  356
            G    VFP+    ++PMS+ +IN  L+R+GY     T+HGFR   ST+L+E G  N+  I
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQG-FNSAWI  350

Query  357  EGALAHGDSDKVRAAYHRGAHWKERVKMMKWWSDYLDQLRE  397
            E  LAH D + +R++Y+++     R  MM+W +DY+D L E
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

483) intB in NC_007613


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  247 bits (923),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 155/382 (41%), Positives = 245/382 (65%), Gaps = 24/382 (6%)

Query  1    MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  60
            + LLVK  G++YWR+++R++GK+  +A+GVYPDVSLA+AR KR++ARK+++ G DP E K
Sbjct  26   LYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKK  85

Query  61   RAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEEHANRVKKSLEDNIFPAIGSHNIAELGT  118
            R  K  ++     TF+ +A EW   +   WSE  A  V  +L+ +IFP +G ++++++  
Sbjct  86   RKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILP  145

Query  119  RDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRP  178
             ++L  ++ +EK G LE   +++Q    I RYA+ +G    NPA E+++++A+++  H P
Sbjct  146  LEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFP  205

Query  179  ALELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPE  238
             L    +P +L+K+ EY G P+TR AT+L LL  +R+ ELR A WSEIDF+ ++WTIP  
Sbjct  206  HLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPES  265

Query  239  REPIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENT  298
            R             KMR  H+VPLS+Q   IL+Q+K F G+  L+F G  D +KPMSE +
Sbjct  266  R------------MKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEAS  313

Query  299  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSKDAVERQMSHMERNSVRAAYI  355
            +N  L+ +GYD +    GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  356  HKAEHLDERKLMLQWWADFLDA  377
            H A  +D R+ M+QW AD++D+
Sbjct  368  H-ALYIDGRREMMQWYADYIDS  388

484) Reut_A2191 in NC_007347


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  247 bits (921),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 157/380 (42%), Positives = 251/380 (67%), Gaps = 11/380 (2%)

Query  25   RLRDGGGLYLELLPSGAKKWRMKYQRPGSKSENLLTFGDYPAVGLSaarerreearaQLA  84
            +L D  GLYL +  +GA+ WR+KY+ +G   E+ L++G YP V+L+ AR +R++AR  ++
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGK--EKKLALGVYPDVSLAEARIKRDDARKIIS  76

Query  85   VGTDPALARDLAKATVAEAARNTFRAVAEEWLKHRHDTWSASYAQKTKQLLERDLYPDLG  144
             G DP+  +   K T   +A NTF+A+A EW +H+  +WS SYA+   + L++D++P LG
Sbjct  77   EGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLG  136

Query  145  QHPIASITPAFLLTVARKIEARGAYEMPRRALVTAGQIFQYAIGTGRASIDASAGMVAQL  204
            +++++ I P  +L + R+IE RG+ E  R+      QIF+YAI+TGRA++++++ + + L
Sbjct  137  KRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTL  196

Query  205  KPRPPVKHYPHVADTQLPDLLQRIDRYTGRPETIAAVKLAVLTFIRGGELRYAEWSELDL  264
             + P   H+PH+   +LP +L+++  Y G P T  A +L +LT +R  ELR AEWSE+D+
Sbjct  197  AA-PKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDF  255

Query  265  EKAEWHVPSGRMKGRLWHKLSGTPHVVPLSRQTIALLEDLKQYTGHYALLFPGAVSVLKP  324
            ++A W +P +RMK R         HVVPLSRQ   +L++LK ++G+Y L+FPG   + KP
Sbjct  256  DNALWTIPESRMKMR-------RKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKP  308

Query  325  VTGEAMNKVFHSIGFKGQQTVHGLRGLASTLLNESGLFDPRVIEAQLSHKETNKTIAAYN  384
            ++  ++N V+  IG+ G+ T HG+R   ST+L+E G F++  IE QL+H + N   ++YN
Sbjct  309  MSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKNSIRGTYN  367

Query  385  HAKYLPERRRVMQWWADYID  404
            HA Y+  RR +MQW ADYID
Sbjct  368  HALYIDGRREMMQWYADYID  387

485) Rahaq2_2006 in NC_016818


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 166/408 (41%), Positives = 259/408 (64%), Gaps = 28/408 (6%)

Query  1    MSLNDTKIRNLKPSAKPFKVSDSHGLYLLVNPGGSRLWYLKYRIDRKESRLGLGAYPDVS  60
            M+L   ++   +P  K +K+SD +GLYLLV+  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAYARQQRDSIRKLLAQNINPAQQRSAERTPS--TPEKTFKHVALEWHNSNR-TWSENHA  117
            LA AR +RD  RK++++  +P++++  E+     ++ +TF  +A EWH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  TRLLASMNNHIFPIIGHLQVTELNTRHFIDLLKRIEKKGLLEVAARTRQHMCN-IMRHAV  176
              +L +++++IFP +G   VT++   + +++L+RIEK+G LE   + RQ  CN I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIENNPAANLEGIIAPPVKRHYPAlplerlpelliriKDYQQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  + LP +L ++ +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNRIWTIPATREAIPGVLYSGRGAKMRTPHIVPLSRQSIAILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIREISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESG  356
            Q++ +SG+  LVFPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQG  344

Query  357  L---WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

486) intB in NC_010554


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  245 bits (915),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 269/407 (67%), Gaps = 24/407 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V T G++YWRL+YR++GK+K LALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaearekrdaarkLIANGFDPSekrkevk-eeqqkeFNTFEKVARDWHATNQ-RWSEGHS  118
            LAEAR KRD ARK+I++G DP+EK++  K  ++    NTF+ +A +WH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  HRVLKSLEDNIFVAIGKRNIAELKTRDLLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQ  178
            + VL +L+ +IF  +GKR+++++   ++LE ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLERIDDYKGRPltklavkltllvFI  238
            +G    NPA ++++++A+ K  H + L    LP FL ++ +Y G P+T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQI  298
            R+ ELR A W EIDF+NA+WTIP  R             KMR  H+VPLSRQ  +IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              FSG+  L+F G  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIEERRLMVQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A  I+ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

487) KPK_4978 in NC_011283


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  245 bits (914),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 165/412 (41%), Positives = 270/412 (66%), Gaps = 24/412 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR+++D+   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRlltqlaveltllvFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G  +T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEVDFETAMWTIPGERELLDGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELR A WSE+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
            K+ +G+  L+F G  D  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDANREKI  407
              W    +E Q++H +++S+R++Y H A  ++ RR M+QW ADY+D+  E++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQV  393

488) Niako_6128 in NC_016609


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  245 bits (913),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 159/391 (41%), Positives = 249/391 (64%), Gaps = 6/391 (1%)

Query  1    MSLSDMQCRAAKPQTKPYKLFDSDGLYLEVLPSGVKSWRLKYSIHEKEKRMALGIYPNVP  60
            M+L+  Q  +A+P+ K YKL D  GLYL V  +G + WRLKY I  KEK++ALG+YP+V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LIEARQKKTEAKALVEQGLDPILVRIEQKQIAALAQADTFEKMALEWYEKQIDNWKSSYA  120
            L EAR K+ +A+ ++ +G DP   +  +K    ++ ++TF+ +A EW + +  +W  SYA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKMKHYLERYIFHKIGGFPLHAIKPLMMLNCLQEIEKTNP-DMSRRLKGACSQIFKYAIA  179
              + + L++ IF  +G  ++  I PL ML+ L+ IEK  + +  R+++  C+QIF+YAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  TGRGENDPTYGLEVAFKKFKKGHYASITVDEFPDFIVKLYDYRDRINRKTFLALRLMLLT  239
            TGR+  +P+  L  ++   K +H++ +  DE+P F+ KL +Y++    +  +A  L+LLT
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTR--MATNLLLLT  238

Query  240  FVRTQELIHAKKTEFDLINKKWVIPGERMKRGLPHIVPLSRQAVEIVKELITLSG-YREY  298
             +RT EL  A  +E+D+ N  W IP  RMK    H+VPLSRQ  +I+++L T+SG YR  
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR-L  297

Query  299  LLPGYFKPREPMCNHTLLMAIKRMGYKGRMTGHGFRSLALGILKEKLHYSHDVADRQLAH  358
            ++PG      PM + ++ M +KR+GY GR TGHGFR     IL E+  ++    + QLAH
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  VPKSSVDRAYDRAQFLPQRIEMMQNYADYID  389
            V K+S+  +Y++A ++  R EMMQ YADYID
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYID  387

489) Rvan_1263 in NC_014664


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  245 bits (913),  Expect = 4e-66, Method: Compositional matrix adjust.
 Identities = 156/384 (41%), Positives = 262/384 (69%), Gaps = 5/384 (1%)

Query  1    MALSDLKIRTTKPTERDFKLSDADGLYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPDIA  60
            MAL+  ++ T++P E+D+KLSD  GLYLLV+  G++ WRL+YR  GK+K LA+G YPD++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSTARDKRAEARRLLAEGVDPSYRKQvevakakvaaantfeavaeeYLASLARDRSEGTV  120
            L+ AR KR +AR++++EG DP+ +K+ E    K++A+NTF+A+A E     +  +SE+  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  RANSHILRKKVYPLLGRRPIAELRPHEILEALQSIEDRGQVDMAHRARTLIGKVFQLAAL  180
            R+  + L K ++P LG+R+++++ P E+LE L+ IE RG ++  ++ R    ++F+ A  
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  SDRAPTDPTVVLRGRLKSWRVQNRASVTSEQTFAPLLRRIDTYEGSPNVRAAMLFLAHTF  240
            ++RA  +P+  L + L + +  + + + +++ ++ +LR++  Y+GSP  R A  +L  T 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADE-LPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  241  VRTVELRFATWSEIDLEDGVWRIPEERMKMGRPHDVPLTASTRAILRDMAKFRRGDY--I  298
            +RT+ELR A WSEID+++++W IPE RMKM R H VPL+     IL+++  F  G+Y  +
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTF-SGQYRLV  298

Query  299  FVSAHVGKSVLGDGTLRKAMKSIGYQGRMTPHGFRSSASSILNERGYRSDVIEMQLAHVE  358
            F +    +  ++++++   +K IGY+GR T HGFR + S+IL+E+G+ S  IEMQLAHV+
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  359  KNAVRRAYNRTLYWNERVSMMQDW  382
            KN++R +YN++LY + R  MMQ W
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-W  381

490) Tint_0383 in NC_014153


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  244 bits (911),  Expect = 6e-66, Method: Compositional matrix adjust.
 Identities = 145/360 (41%), Positives = 244/360 (68%), Gaps = 8/360 (2%)

Query  39   RWWRFDYRYGGKDKTLSVGVYPDVTLARARQRADEIRQQLLDGIDPS-IARKAKVTGVVA  97
            R WR+ YR +GK+K L++GVYPDV+LA AR + D+ R+ + +G DP+   RK K+T  ++
Sbjct  36   RYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKIS  95

Query  98   GEVSDSFEIIAREWHAGRAPTLSGNTSKNILLRLQNNAFPYIGQKSVRELRAPDVLDVLR  157
            +  +++F+ +A EWH  ++ + S + ++++L  L+++ FPY+G++SV ++ + ++L++LR
Sbjct  96   A--TNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILR  153

Query  158  RIEERGLGETARRVHQLIAQVMRYAVATGRADADPTPALRGALKPVMVRHHAAVIEPAEL  217
            RIE RG  E  R+V+Q   Q+ RYA+ATGRA  +P++ L ++L +    H +  + + EL
Sbjct  154  RIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPH-LRADEL  212

Query  218  GAMLRAFDGYTGGVVVRTALQLQVMLFVRPGELRHMEWAELDLGGAQWRIPGEKMKMREP  277
               LR +  Y G+ V R A +L ++  +R  ELR  EW+E+D++ A W IP  +MKMR  
Sbjct  213  PVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRK  272

Query  278  HIVPLPRQAVALLKDLQPFSCRSRYVFPSPRSKDRPMSENAVNVALRTLGYDRDTVTGHG  337
            H+VPL+RQ   +L++L+ FS + R VFP+    ++PMSE ++N+ L+ +GYD +  TGHG
Sbjct  273  HVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHG  331

Query  338  FRATARTILDEKLRYRVEVIEMQLAHAVRDPLGRAYNRTKYLEERKDMMQAW-ADYLGKI  396
            FR T  TIL+E+  +    IEMQLAH  ++++  +YN++ Y++ R++MMQ W ADY++ +
Sbjct  332  FRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

491) ECABU_c49370 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 150/359 (42%), Positives = 228/359 (64%), Gaps = 16/359 (4%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARKKREEARKLVTAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  118
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  238
            +G    NPA E+++++A+++  H P L    +P +L+K+ +Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VPLS+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  357
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

492) SBO_4174 in NC_007613


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 164/409 (41%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L ARQVETA+PK+K YK++D  GLYL V + G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTlaqarakrdqakkllaqGIDPKAEQKEAQAEN--SGAYSFETIAREWHASNK-RWSED  117
            V+LA+AR KRD+A+K++++G DP   ++  +  +  S++ +F+++A EWH  +   WSE 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
                VL  L+  IFP +G   + ++   ++L  +++++  G  +  ++++Q    I RYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +    NPAS+++++L++ KA H+P L +  +P FL +LA Y+G  +TR+A +L LLT
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVQLSRQAMILLN  297
             +R+ ELR A W E+DFD++LW +P  R            MKM+  H+V LSRQ   +L+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QLK +SG+  L+FPG  D  K MSE ++N  L+ +GYD ++   GHGFR      L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLQA  403
            +   W    IE QL+H ++N++R++Y H+   +D RR M+QW ADY+++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

493) MU9_117 in NC_020418


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 171/405 (43%), Positives = 268/405 (67%), Gaps = 24/405 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALT  +V +A+P +K YKL+D  G+ L+V T G++YWRL+YR++GK+K LALGVYPD+S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaearekrdaarkLIANGFDPSekrkevk-eeqqkeFNTFEKVARDWHATNK-KWSEGHS  118
            LAEAR KRD ARK+I++G DP+EK++  K  ++    NTF+ +A +WH  +   WSE+ +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  HRVLKSLEDNIFAAIDKRNIAELKTRDLLEPIKAVEMSGRLGVAARLQQRVTGIMRYAVQ  178
            + VL +L+ +IF+ ++KR+++++   ++LE ++ +E  G L    +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLQRIDDYKGRPltklavkltllvFI  238
            +G    NPA ++++++A+ K  H + L    LP FL+++ +Y G P+T++A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTPHLVPLSRQAIEILKQI  298
            R+ ELR A W EIDF+NA+WTIP  R             KMR  H+VPLSRQ  +IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              FSG+  L+F G  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E G+ 
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIEERRLMVQWWADFL  400
              W    +E Q++H ++NS+R++Y H A  I+ RR M+QW AD++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYI  386

494) EBL_c09420 in NC_017910


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (895),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 156/384 (41%), Positives = 247/384 (65%), Gaps = 2/384 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRTDYLALLANGIDPqiqaevaeeaqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +      +Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGVGMAFEKPKKQSMPTLRPEELPKLMRSLIMSNLSVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK    P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLDAKLWTIPAERMKANREHVVPLSPQALEILEVMKPISAHREHVF  306
            +R  E  +A W+EID+D  LWTIP  RMK  R HVVPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALTHSDK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E GFN+  IE  L+H DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLEARKELMDWWG  390
            N +R +YN++ Y+++R+E+M+W +
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYA  383

495) c5371 in NC_004431


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (897),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 149/359 (42%), Positives = 228/359 (64%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  144
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G    NPA E+++++A+++  H P L    +P +L+K+ +Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VP+S+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

496) i14_4891 in NC_017652


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (897),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 149/359 (42%), Positives = 228/359 (64%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  144
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G    NPA E+++++A+++  H P L    +P +L+K+ +Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VP+S+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

497) i02_4891 in NC_017651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (897),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 149/359 (42%), Positives = 228/359 (64%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALT  +V +A+P EK+Y L D  G+ LLVK  G++YWR+++R++GK+  +A+GVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVK-EEQAKEIITFEKVAREWLVTNQ-KWSEDHA  144
            LA+AR KR++ARK+++ G DP E KR  K  ++     TF+ +A EW   +   WSE  A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
              V  +L+ +IFP +G R+++++   ++L  ++ +EK G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G    NPA E+++++A+++  H P L    +P +L+K+ +Y G P+TR AT+L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELR A WSEIDF+ ++WTIP  R             KMR  H+VP+S+Q   IL+Q+
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
            K F G+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR    + L E G+
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

498) PSPA7_5324 in NC_009656


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (897),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 157/378 (42%), Positives = 241/378 (64%), Gaps = 2/378 (0%)

Query  2    LTDAHCRAAKPKEQLYRLNDFRGLYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVSLA  61
            LT  +  +A+PKE+ Y+L+D RGLYL VK  G + WR ++++AGK   +ALG YP VSLA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   DARDKCEEARKLVKQGINPVQNRQVERIKREQDSANTFEAVAKEWLALKD--WEEVTKRR  119
            +AR K ++ARK++ +G +P ++++ E++ +   ++NTF+A+A EW   K   W E   R 
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  120  RLDMLQRVVFPSIGKMPVRQITPAHVLDILSKTAKRGAPTVAAEAKRTMSGIFELAVATL  179
             L+ L++ +FP +GK +V +I P ++L+IL +  KRG+       ++  + IF  A+AT 
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  180  RADNDPVWPVRKALPANKTQHKTALTTAQIGKLLTDFDNHRCGYQVNFCIQLMWWTLARP  239
            RA  +P   +  +L+A K+ H   L + ++  +L  + + + +       +L+  T  R 
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  240  GEAAEAEWAEFDLDKALWSIPARRMKARREHLVPLPRQAVEMLRRLHAISGDRMHLFPGR  299
             E   AEW+E+D+D+ALW+IP  RMK RR H+VPL+RQ  ++L++L ++SG+   +FPGR
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGR  302

Query  300  DDRNKPMSAHSIRQALKALGWSGTYSPHGTRTTGSTRLNEMGYRPDAIEAQLAHAEPNSV  359
             D NKPMS  SI   LK +G  G  + HG R T ST L+E G+ +  IE QLAH + NS+
Sbjct  303  CDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSI  362

Query  360  RRTYNHATYLDERREMMQ  377
            R TYNHA Y+D RREMMQ
Sbjct  363  RGTYNHALYIDGRREMMQ  380

499) UMN798_2960 in NC_017046


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 248/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + +  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREHVF  306
            +R  E  +A W+EID+D+ LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHSDK  366
            P+R D +++M+  + N  LKRIGY+GR  +HG+R   ST L+E GFN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLNKRIELMAWWGRFV  393
            N +R +YN++ Y++ R E+M W + ++
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

500) SL1344_2712 in NC_016810


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 248/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + +  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREHVF  306
            +R  E  +A W+EID+D+ LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHSDK  366
            P+R D +++M+  + N  LKRIGY+GR  +HG+R   ST L+E GFN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLNKRIELMAWWGRFV  393
            N +R +YN++ Y++ R E+M W + ++
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

501) STM474_2864 in NC_016857


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 248/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLTVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + +  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLDKKLWTIPAERMKAKREHIVPLSPQALGILDVMKPISAHREHVF  306
            +R  E  +A W+EID+D+ LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQSMNSQTANAALKRIGYGGRLVAHGLRSIASTALNESGFNADVIEAALAHSDK  366
            P+R D +++M+  + N  LKRIGY+GR  +HG+R   ST L+E GFN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLNKRIELMAWWGRFV  393
            N +R +YN++ Y++ R E+M W + ++
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

502) VAPA_1c46740 in NC_022247


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  240 bits (896),  Expect = 9e-65, Method: Compositional matrix adjust.
 Identities = 159/395 (41%), Positives = 260/395 (66%), Gaps = 7/395 (1%)

Query  1    MALTDTFVRQVKPTGKANGDKYADGAGMYLLVKTAG-KYWRMDYTFAGKRKTLALGTYPE  59
            MALT   V   +P  K    K +D  G+YLLVKT+G +YWR+ Y +AGK K LALG YP+
Sbjct  1    MALTARQVETARPKEKDY--KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPD  58

Query  60   VSlakardrraaarellaDGTDPSAAKREKKRALADAAANTFETVAREWLGKTAAKRASG  119
            VSLA AR +R  AR ++++G DP+  KR  K +   +A+NTF+++A EW    +  ++ +
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  120  TQLKVKTWLEKDVLPFIGKMPMSTIGPRDILERVVRKLEARGAIDTAHRVKQLCGQVFRF  179
                V   L+KD++P++GK +++ I P ++LE ++R++E RG+++  ++V+Q C Q+FR+
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLE-ILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  180  AVVSGLAERDVTADLSEALASKATKHFAAITEPKRVGDLMRSIHAYSGHPTTVAALKLSP  239
            A+ +G A  + +++L+ +LA+  + HF+ +  +  +  ++R +  Y G P T  A +L  
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  240  LLFVRPGELRTAEWAEIDLDAAEWRIAGPKMKMKVDHVVPLATQAVEILRNLHPITGHGR  299
            L  +R  ELR+AEW+EID+D A W I+ ++MKM+  HVVPL+ Q  +IL++L  ++G+ R
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  300  FVFPSIRTGERPMSENTINAALRGMGYSAEVHTAHGFRATARTIMDEVLGERVDFIEHQL  359
            +VFP+    ++PMSE +IN  L+ +GY +   T+HGFR T  TI++E  G     IE QL
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  360  SHVVRDTNGRAYNRTAHLPARREMMQRWADYLDKL  394
            +HV +++   +YN++  + +RREMMQ+ ADY+D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

503) Glov_3112 in NC_010814


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 260/393 (67%), Gaps = 5/393 (1%)

Query  7    PLADIQVNKAKKKEKDYKLSDGGGLHLLVTKTGGKLWRMQYRFDGKQKMLSFGAYPAISL  66
            +L+  QV+ A+ KEKDYKLSD  GL LLV  TG++ WR++YR+ GK+K L++G YP +SL
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSL  61

Query  67   ADARQRREDARKLLANGQDPaavkkavqeaavvaaastfaivaGEWFQKRKPEWVDSHAV  126
            A+AR +R+DARK++++G DP+  K+  + +  ++A++TF  +A EW Q +   W +S A 
Sbjct  62   AEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYAR  121

Query  127  SVKGRLDNYILPAFGSKPIVEVTAADVRTMLLKIEARGTIEAAKRVKVICGQVFRYAAAH  186
            SV   LD+ I+P +G +++ ++ + ++  +L +IE RG++E  ++V+  C Q+FRYA A 
Sbjct  122  SVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIAT  181

Query  187  DLIQHDPSAALKPSELFRKVEKRHFAAVTDPKELAPLLRSIEGYTGSIETRCAlrllpml  246
            +    +P++ L ++    K    HF+ +  + EL+ +LR +  Y GS  TR A  LL + 
Sbjct  182  GRATVNPASELTSTLAAPKAA--HFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLT  238

Query  247  lmrpGELRHLEWSEIDREAGQINIPAEKMKMRTAHTVPLCKQALAILEEIRPLTGHGKYV  306
             +R  ELR  EWSEID + +   IP  +MKMR  H VPL +Q   IL++++ ++G+ + V
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLV  298

Query  307  FPSTRSAERPISDNTLNACFRRMGYDSDTVTAHGFRATARTILDEVLGFRPDIIEHQLAH  366
            FP+    ++P+S+ ++N  ++R+GYD+ + T+HGFR T  TIL+E  GF +  IE QLAH
Sbjct  299  FPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  367  AVKDPNGRAYNRTAFIDDRRKMMQQWSDYLDSL  399
              K++   +YN++ +ID+RR MMQ  +DY+DSL
Sbjct  357  VDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

504) CFSAN001992_19740 in NC_020307


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            +R  E  +A W+EID+   LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ Y++ R+E+M W +++I
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

505) SNSL254_A2952 in NC_011080


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            +R  E  +A W+EID+   LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ Y++ R+E+M W +++I
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

506) SN31241_38450 in NC_021902


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            +R  E  +A W+EID+   LWTIP  RMK +R H+VPLS Q  +IL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ Y++ R+E+M W +++I
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

507) Tbd_2005 in NC_007404


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 162/398 (41%), Positives = 255/398 (65%), Gaps = 11/398 (2%)

Query  17   VALTDTAVKKAKPGDKPYKMADEKGLYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVS  75
            +ALT   V  A+P +K YK++DE+GLYLLV+ +G +YWR+ YR+ GK K LALGVY+DVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  76   LararqkrddaraMLADGTDPGEQRKETKRANQAAQANSFEAVAREWHAMKLKRKWTQST  135
            LA AR KRDDAR ++++G DPGE+++  K +++ + +N+F+A+A EWH  K    W++S 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHK-SLSWSESY  119

Query  136  ADKTMAQLEAYVFPEMGHLPIASVKASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGV  195
            A   +  L+  +FP +G  +++ + + ++L +LR++E+RG      ++R+ C QIFRY++
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  196  ATGRAEDNPAAHLLGALHKPEVNHRPAITDRRGFGAFLRDLREATGYDAVTRHAAYFALL  255
            ATGRA  NPA++L ++L  P   H P +     +  FLR L E  G  +VTR A+ + LL
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRA-DELPVFLRKLAEYHG-SPVTRMATNLLLL  237

Query  256  TFVRAQEFRYAKWEEIDWQAKEWKVPAKRMKTGKALPAHTVPLSQQALALLTELKNLTGH  315
            T +R+ E+R A W EID +   W +P  RMK  +    H VPLS+Q   +L +LK ++G+
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRR---KHVVPLSRQVTDILQQLKTFSGQ  294

Query  316  SPYLFPKVKGYGDAEVISENTVGKMLNKMGYQGRQCVHGFRASARSILSEQGWSREAMER  375
               +FP     +    +SE ++  +L+++GY+GR   HGFR +  +IL EQG +   +E 
Sbjct  295  YRLVFP--GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEM  352

Query  376  QLDHKETDSTVAAYARSEHLPERRNMMQAW-ADTCDAL  412
            QL H + +S  ++Y ++  +  RR+MMQ W AD  D+L
Sbjct  353  QLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

508) Dd703_3554 in NC_012880


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  239 bits (890),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 165/410 (41%), Positives = 263/410 (65%), Gaps = 29/410 (7%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT  60
            M L ARQVETA+PKEK YK++D  GLYL +   G++YWR+KYR ++  KE +LA+GV P 
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAG--KEKKLALGVYPD  58

Query  61   VTlaearakrdeakkllVQGIDPkaeqkea--qaeTAGAYTFETIARQWHASNK-RWGD-  116
            V+LAEAR KRD+A+K++ +G DP   ++        +++ TF+++A +WH  +   W++ 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  117  YHRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRY  176
            Y R+ V+  L+  IFP +G   +  +   ++L  ++ ++  G  +  ++++Q    I RY
Sbjct  119  YARS-VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  177  AVQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLL  236
            A+  +    NPAS+++++L++ KA H+P L ++ L  FL +LA Y+G  +TR+A +L LL
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  237  TFVRSSELRFAQWREFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALL  296
            T +R+ ELR A+W E+DFD+A W +P  R            MKM+  H+VPLSRQ   +L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDIL  285

Query  297  EQLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGES  356
            +QLK++SG+ + +FPG  D +K MSE ++N  L+ +GYD ++   GHGFR      L E 
Sbjct  286  QQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQ  343

Query  357  GL---WSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYLDA  403
            G+   W    IE QL+H ++N++R++Y H+  Y+D RR M+QW ADY+D+
Sbjct  344  GFNSAW----IEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDS  388

509) mll6432 in NC_002678


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  238 bits (888),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 164/399 (42%), Positives = 251/399 (63%), Gaps = 11/399 (2%)

Query  6    MALSDVKCRNARPASKLVKLSDGGGLQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLIS  65
            MAL+  +   ARP  K  KLSD  GL L V+ TG+R WRL YR++GK+K LALG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  66   LAEAREARDTAKRLLLRGIDPAQERK----SQKASAEDTFRSIAEDYVDK--LKKEGRAD  119
            LAEAR  RD A++++  G DP++ ++    +QK SA +TF+++A +  +   L       
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  120  RTITKVKWLLDFAYPTFGDKSVREIDPATILAALRSVEVRGRYESARRMRSTIGSVFRYA  179
            R++     L    +P +G +SV +I P  +L  LR +E RG  E  R++R     +FRYA
Sbjct  121  RSVLEA--LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  180  IATARADVDPTIALRGALVGPTVTPRAAVTDPKALGGLLRAINAFDGQPTTRAALKLMAL  239
            IAT+RA V+P+  L ++L +P  +  + +  +  L  +LR +  ++G P TR A +L+ L
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  240  LFPRPGELRAAGWDEFDFESSVWSIPEGRMKMRRPHRVPLSTQAVSVLTSLREISGGGSL  299
               R  ELR+A W E+DF++++W+IPE+RMKMRR H VPLS Q   +L  L+ +SG   L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  300  LFPSVRSGSRPISDNTLNAALRRMGYGKEEATAHGFRATASTLLNECGKWHPDAVERQLA  359
            +FP+    ++P+S+ ++N  L+R+GY+   AT+HGFR T ST+L+E G  ++  +E QLA
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  360  HIENNDVRRAYARAEHWEERVRMMQWWADYLDELESKNS  398
            H+++N +R +Y +A   + R  MMQW ADY+D L  + S
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

510) Pecwa_0447 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  238 bits (888),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 172/412 (42%), Positives = 259/412 (63%), Gaps = 24/412 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALT     TA+P+EK YKL+D +GLYLLV   G++ W LKYR+ GKE ++A+G YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAKAREKRDEIRLLLLEGIHPTekreeek-eqaqeaLNTFAKVAQDWHRNISQNRWSETH  119
            LA AR KRD+ R ++ EG +P EK+  EK  Q   A NTF  +A +WH++ S + WSE+ 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLS-WSESY  119

Query  120  AGRVWRDMERNLLPAIGHRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
            A  V   ++++++P +G R ++D+   ++LE L+ +E+ G L+   ++RQ   +I RYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  QNDLIERNPAQDLSGAIAAPKATHRPALKLNKLPDFLARIERHKGrtltrlalkltlCVF  239
              +    NPA +L++++AAPKA+H P L+ + LP FL ++    G  +TR+A +L L   
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELR A W+EIDF  A+WTIP  R             KMR  H+VPLSRQ   +L++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  300  IKAISGAHELIFPGDRRPTKPMSENTVNNALRTMGYDTTIEVCGHGFRTMACSALVESG-  358
            +K++SG   L+FPG     KPMSE ++N  L+ +GYD      GHGFR    + L E G 
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGR--ATGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADYLDANREE  408
               W    +E Q++H ++N++R++Y H A  +D RR M+QW ADY+D+  E+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

511) ETAE_2742 in NC_013508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 159/387 (42%), Positives = 246/387 (64%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT  +V  A++ EKD  L D  GL+L+VKT+G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   SLADARGLRADYLALLANEIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTPEY  126
            SLA+AR  R D   ++++  DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLEKDVFPAIGELPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
            A+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDTNPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWSEIDLDAKLWTIPAERMKAKREHIVPLSTQALDILEVMKPISAHREHVF  306
            +R  E  +A WSEID+D  LWTIP  RMK +R H+VPLS Q  DIL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTSMNEAGFNSDVIEAALAHIDK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E GFNS  IE  LAH+DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLQKRIELMSWWGALI  393
            N +R +YN++ Y++ R E+M W +  I
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

512) BN69_1891 in NC_018485


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 163/394 (42%), Positives = 255/394 (65%), Gaps = 12/394 (3%)

Query  1    MPLTDTACRAAKGRASEYKLSDGGGLYLLVKPSGARLWNQAYRFSGKQKKLSHGPYPSVP  60
            M+LT     +A+ +  +YKLSD  GLYLLVK +GAR W   YR++GK+KKL+ G YP V+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LVEARRLRDEAKKLLASGVDPGANKKAAKLTAVISATNTFGGVAEEYLQRIEDEGAAAST  120
            L EAR  RD+A+K+++ G DPG +K+  KLT  ISATNTF ++A E     +++ + + +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW----HQHKSLSWS  116

Query  121  VTKSRWLLVDLAG---PDLGARPIADITPAEILALLQRIERSGRRETARRLRSVVGTVFR  177
             + +R +L  L     P LG R+++DI P E+L +L+RIE+ G  E  R++R     +FR
Sbjct  117  ESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  178  LAVSTLRAKDDPTILLRGALMAPKVQHRAAITDEKQLGALLVAIDAYDGWPTLRCALQFT  237
             A++T RA  +P+  L ++L APK  H + +  + +L  +L  +  Y+G P  R A ++ 
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLL  235

Query  238  ALTFARPGEVRGATWAEINVEEAIWRIDGDRTKVRRPHDVPLSRQALDVLREVKEVA-RS  296
             LT  R  E+R+A W+EI+ ++A+W I   R K+RR H VPLSRQ  D+L+++K  + + 
Sbjct  236  LLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY  295

Query  297  TLVFPSIRSNARPLSENAMNAALRRMGFTQDEMTAHGFRAAASSILNERGFRPDVIEAAL  356
             LVFP+     +P+SE ++N  L+R+G+ ++  T+HGFR + S+IL+E+GF +  IE  L
Sbjct  296  RLVFPGRCDINKPMSEASINMVLKRIGY-DGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  GHQDQNEIRRAYNRASYWQERIELMQAW-SDCVD  389
            +H D+N IR +YN+A Y + R E+MQ W +D +D
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-WYADYID  387

513) Rahaq2_2650 in NC_016818


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 260/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDSKIRNLKPSPKPFKVSDSHGLYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVS  60
            M+L   ++   +P  K +K+SD +GLYLLV+  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLAQNINPAQQRSAERTPS--TPEKTFKHVALEWHNSNR-TWSENHA  117
            LA+AR +RD+ RK++++  +P++++  E+     ++ +TF  +A EWH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  SRLLASMDNHIFPVIGHLPVAELKPRHFIDLLKSIEKKGLLEVAARTRQHMYNIMRHAVH  177
              +L ++D++IFP +G  +V+++ P + +++L+ IEK+G LE   + RQ   +I R A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QELTEHNPAANLDGIIAPPIKRHYPAlplerlpellirirDYQQGREltrlavlltlhlF  237
               +  NPA++L + +A+P   H+P L  + LP +L ++ +Y +G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLTG  239

Query  238  IRSSELRFARWSEIDFKNRIWTIPATRDSIPGVRYSGRGAKMRTPHIVPLSRQAITILKQ  297
            +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+Q
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IWEISGHQELIFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESGL  357
            +  +SG+  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQGF  345

Query  358  ---WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLD  401
               W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

514) W5S_0459 in NC_017845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  237 bits (885),  Expect = 7e-64, Method: Compositional matrix adjust.
 Identities = 173/412 (42%), Positives = 262/412 (64%), Gaps = 24/412 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLVS  60
            MALT     TA+P+EK YKL+D +GLYLLV   G++ W LKYR+ GKE ++A+G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAKAREKRDEIRLLLLEGIHPTekreeek-eqaqeaLNTFEKVAQDWHRNISQNRWSETH  119
            LA AR KRD+ R ++ EG +P EK+  EK  Q   A NTF+ +A +WH++ S + WSE+ 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLS-WSESY  119

Query  120  AGRVWRDMERNLLPAIGHRHIADLKTKDLLEPLKVVEQNGHLDLASRLRQRVTDIMRYAV  179
            A  V   ++++++P +G R ++D+   ++LE L+ +E+ G L+   ++RQ   +I RYA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  QNDLIERNPAQDLSGAIAAPKATHRPALKLNTLPDFLARIERHkgraltrlalkltlCVF  239
              +    NPA +L++++AAPKA+H P L+ + LP FL ++    G ++TR+A +L L   
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELR A W+EIDF  A+WTIP  R             KMR  H+VPLSRQ   +L++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  300  IKAISGAHELIFPGDRRPTKPMSENTVNNALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            +K++SG   L+FPG     KPMSE ++N  L+ +GYD  +   GHGFR    + L E G 
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADYLDANREE  408
               W    +E Q++H ++N++R++Y H A  +D RR M+QW ADY+D+  E+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

515) Dd1591_1514 in NC_012912


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 265/408 (65%), Gaps = 28/408 (6%)

Query  1    MSLNDSKIRNLKPSAKPYKVSDSHGLYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVS  60
            M+L   ++   +P  K YK+SD +GLYLLV+  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLAQNINPAQQRAAEKAPR--SPEKSFRDVALDWHKSNR-TWSESHA  117
            LA+AR +RD+ RK++++  +P++++  EK  +  S+ ++F+ +A +WH+ +  +WSES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  TRLLASMNNHLFPVIGHLPVTELKARHFIDllkgiekkglleVAARTRQHLCN-IMRYAV  176
              +L ++++++FP +G  +VT++ + + +++L+ IEK+G LE   + RQ  CN I RYA+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIEHNPAANLDGIIAPPVKRHYpalpleklpellaRIEDYKQGRELTRMAVSLTLHL  236
                   NPA++L + +A+P   H+P L  + LP +L ++ +Y +G  +TRMA +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQSITILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIREISGHQELIFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESG  356
            Q++ +SG+  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WSQDAVERQMSHQERNSVRAAYIHKAEYLDARQAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

516) Xaut_2233 in NC_009720


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 164/388 (43%), Positives = 251/388 (65%), Gaps = 10/388 (2%)

Query  1    MALTDLALRNAKPRDKAYKLFDGGGLHLLVNPNGSRIWRLAYRFAGKPKQISFGPYPTVS  60
            MALT   +  A+P++K YKL D  GL LLV+  G+R WRL YR+AGK K++++G YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREKREDAKKQLLDNKDPTTVRKVEKVTAAISEGNTFSRLVGEYIERLEMRNSAPAT  120
            LAEAR KR+DA+K + +  DP   ++ EK+T  IS  NTF  L  E  ++  +  S + +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  VTKNRWLLENLAG---PALGRRPISEITPFEVLAVLQQVersgrresarrlrsaIGSVFR  177
                R +LE L     P LG+R++++I P+E+L +L+++E+ G  E  R++R     +FR
Sbjct  121  ----RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  178  FAIATLRAQHDPTSALKDALERPKVKHRSALTDPKQLGGLMRSIDEYDGWPTLRSAMLFT  237
            +AIAT RA  +P+S L  +L  PK  H + L  + +L  ++R + EY+G P  R A  + 
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLL  235

Query  238  ALTFARPGEVRGARWREIDLDKAVWSIPAERMKMRRAHVVPLSRQALEVLSEIRPLSGSS  297
             LT  R  E+R+A W EID+D+A+W+IP  RMKMRR HVVPLSRQ  ++L +++ +SG  
Sbjct  236  LLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY  295

Query  298  ELIFPSIRSNKKILSENAMNSALRRMGFTQEEMTAHGFRAAASSILNEKGHSPDVIEAAL  357
             L+FP+    +K +SE ++N  L+R+G+ +   T+HGFR + S+IL+E+G ++  IE  L
Sbjct  296  RLVFPGRCDINKPMSEASINMVLKRIGY-DGRATGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  358  GHLDQNEVRRAYNRATYWPERVVLMQAW  385
            +H+D+N +R +YN+A Y   R  +MQ W
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQ-W  381

517) SLG_29060 in NC_015976


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 166/406 (41%), Positives = 263/406 (65%), Gaps = 27/406 (6%)

Query  1    MALTAVAINKAKGRAKPYKLTDGDGLFLYVTPNGGRYWRMNYRHHGKQKTLAFGVYPDTG  60
            MALTA  ++ A+ + K YKL+D  GL+L V   G+RYWR++YR  GK+K LA+GVYPD +
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADAREQRDAARKVLARGCDPAEQIRLERIaaavaasnsfkavaDEWLVKVECEGRSAVT  120
            LA+AR +RD ARK+++ G DP+E+ R E+++  ++A+N+F A+A EW             
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQH----------  110

Query  121  MKKLRW-------LLDFINESI----GKRPIASITAQELLVMLRKMESKGRYETAKRLRS  169
             K L W       +L+ ++  I    GKR+++ I + E+L +LR++E +G  E  +++R 
Sbjct  111  -KSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQ  169

Query  170  TASQIFRYAIATARAERDVAADLRGALIAPQPVHRAAITNADAAGGLLRAIEAFEGHPST  229
              +QIFRYAIAT+RA  + A++L ++L AP++ H + +  AD    +LR +  ++G P T
Sbjct  170  YCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHL-RADELPVFLRKLAEYHGSPVT  228

Query  230  KAALRLLPHVFVRPGELRFAEWADFDFDKAVWTIPPYKTKMRRVHSIPLSRQALAILETI  289
            + A  LL    +R  ELR AEW+++DFD+A+WTIP  + KMRR H +PLSRQ   IL+ +
Sbjct  229  RMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQL  288

Query  290  EH-DADYSSYLFPSLRSVDRPMSENTINAALRRLGFAQDEMTGHGFRAMAATLLNEMGLW  348
                ++Y   +FP+   +++PMSE +IN  L+R+G+ ++  TGHGFR   +T+L+E G+ 
Sbjct  289  KTFSGQY-RLVFPGRCDINKPMSEASINMVLKRIGY-DGRATGHGFRHTMSTILHEQGF-  345

Query  349  HPDAIERQLAHCDNNAVRRAYTRGEYWDERVRMMQHWSDHLDFLRD  394
            ++  IE QLAH D+N++R +Y ++ Y D R  MMQ  +D +D L +
Sbjct  346  NSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

518) SbBS512_E4662 in NC_010658


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  235 bits (876),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 141/327 (44%), Positives = 211/327 (65%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRATEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +T +G+  L+F G  D  KP+SE  +N
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASIN  315

519) SSON53_18230 in NC_016822


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  235 bits (878),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 141/327 (44%), Positives = 211/327 (65%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  NKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +T +G+  L+F G  D  KP+SE  +N
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASIN  315

520) SBO_1221 in NC_007613


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  235 bits (876),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 164/408 (41%), Positives = 253/408 (63%), Gaps = 28/408 (6%)

Query  1    MSLNDSKIRNLKPSSKPVKLSDSHGLYLLVNQGGSRIWYLKYRFSGKESRVSLGAYPLVS  60
            M+L   ++   +P  K  KLSD +GLYLLV+  G+R W LKYR++GKE +++LG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEARQRRDDIRKLLTQNINPAHQRMSDKAAA--SPEKYFKAVALAWHKTNK-KWSPDYA  117
            LAEAR +RDD RK++++  +P++++  +K +   S+ + F A+A  WH+ +   WS  YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ARILASMENHIFPAIGHLPVTTLKTQNFTALLRVIEDKGFLEVASRTRQQLCN-IMRYAV  176
              +L +++++IFP +G  +VT +   +   +LR IE +G LE   + R Q CN I RYA+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVR-QYCNQIFRYAI  179

Query  177  QQGFTENNLAQHLEGVTAPPVKNHYPAlplerlpelferIGDYQQGRQLTRLAVVLTLHL  236
              G +  N A +L +  A+P   H+P L  + LP ++ ++++Y +G  +TR+A  L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWGEIDFRNKIWTIPATREAIEKVRFSGRGAKMRTPYIVPLSRQAIAILK  296
             +R+ ELR A W+EIDF N +WTIP +R             KMR   +VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIKEISGHLELVFPGDHNPYKPMSENTVNRALRLMGYDTKTDVCGHGFRTMACSALVETE  356
            Q+K +SG+  LVFPG  +  KPMSE ++N  L+ +GYD ++   GHGFR    + L E  
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WSRDTVERQMSHQERNSVRAAYIHRAEHLDARTAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A  +D+R  MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

521) Nham_0294 in NC_007964


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  235 bits (875),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 157/384 (41%), Positives = 250/384 (66%), Gaps = 7/384 (1%)

Query  2    LTQLAITAAKPKAKPYKLSDGAGLSLLVETGGGKLWRFRYHFGGKEKMLSFGAYPEVTLA  61
            LT   + +A+PK K YKLSD  GL LLV T G++ WR++Y+++GKEK L++G YP+V+LA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   QARAKRDEARQTLAGGIDPAQKRKEDKVAASISAANTFGVVAAEYIDR--LEKEGAAPST  119
            +AR KRD+AR+ ++ G DP++K++ +K++  ISA+NTF  +A+E  ++  L    + + +
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  120  VSKNKWLLQDLASPLTKRPIADILPAEILDLCKRVEKSGRRDTARRLRGTIGSVFRYAVV  179
            V     L +D+ + L KR+++DILP E+L++ +R+EK G  +  R++R     +FRYA+ 
Sbjct  123  VLEA--LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  180  TLRAQSDPTYALRGALLKPEVNHRAAIVDEAKLGALMVNIDQYDGWPTlraallllalTM  239
            T RA  +P+  L ++L  P   H + +  +  L  ++ ++ +Y+G P  R A  LL LT 
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADE-LPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  240  TRPGDVRHMRKSEIIFPKALWRIPAERMKMRRPHDVPLSKQALAIIREVWDLTAGNGLLL  299
             R  ++R    SEI F +ALW IP  RMKMRR H VPLS+Q   I++++  +++   L++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  300  PSIRSAIKPLSENAMNSALRRMGYSKEEATAHGFRSSASTILNERGFNPDVIEAALAHQD  359
            P+     KP+SE ++N  L+R+GY    AT+HGFR + STIL+E+GFN+  IE  LAH D
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  360  EDDVRRAYNRATYLPERAKLMQDW  383
             + +R +YN+A Y+  R  +MQ W
Sbjct  359  KNSIRGTYNHALYIDGRREMMQ-W  381

522) Veis_2767 in NC_008786


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  235 bits (875),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 155/383 (41%), Positives = 244/383 (64%), Gaps = 10/383 (2%)

Query  20   RLSDAAGLYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVPLKDARTARDDARKQHQRG  79
            +LSD  GLYL V  +G++ W  KYR+ G+EK+LALGVYPDV+L +AR  RDDARK    G
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEG  78

Query  80   VDPVLERQLERLSNRSDPEATFEVVAREFHTTKKRSWSLEYARRWLERLEKDIFPWLGKL  139
             DP   ++ E+L+++  +  TF+ +A E H  K  SWS  YAR  LE L+KDIFP LGK 
Sbjct  79   GDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKR  138

Query  140  PLKQISAPMLLQALRRVEARGARELPHSLLEACGQTFRYGIATGRCDRNSAADLRGALRP  199
            ++ +I +  +L+ LRR+E RG+ E  + + + C Q FRY+IATGR   N+A++L ++L +
Sbjct  139  SVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAA  198

Query  200  VLTKHMAAILEPKEVRELMLAIRGYDGQLTTRVALYLSALLFQRPGNIRQMEWEEVDLEA  259
              + H +  L + E+  ++  +  Y+G   TR+A  L  L   R  ++R  EW E+D++ 
Sbjct  199  PKAAHFPH-LRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDN  257

Query  260  SMWKIPSEKMKRKKSEKLNGRPHLVPLARQAVAVLRDLQPLTGRGRYVFPAVVSPKRPMS  319
            ++W IP  +MK +       R H+VPL+RQ   +L++L+ ++G+ R VFP+    ++PMS
Sbjct  258  ALWTIPESRMKMR-------RKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMS  310

Query  320  ENTVRVALRRMGFDNDTMTPHGFRAMARTLLVEWLNISSDVIEVQLAHRKSGPLGSAYDR  379
            E ++ + L+R+G+D  + T HGFR    T+L E   ++S  IE+QLAH    ++ ++Y++
Sbjct  311  EASINMVLKRIGYDGRA-TGHGFRHTMSTILHE-QGFNSAWIEMQLAHVDKNSIRGTYNH  368

Query  380  AEFMVQRQTMMQSWADYLDALCE  402
            A ++  R+ MMQ  ADY+D+L E
Sbjct  369  ALYIDGRREMMQWYADYIDSLSE  391

523) LPO_0155 in NC_018139


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (873),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 155/384 (41%), Positives = 253/384 (66%), Gaps = 7/384 (1%)

Query  11   NAKPEAKSYKISDEKGLFMHVTPQGNKYWRLKYRFDGKEKLLALGVYDDVTlakarekrd  70
             A+P  K YK+SDE+GL++ V   G +YWRLKYR+ GKEK LALGVY DV+LA AR KRD
Sbjct  10   TARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRD  69

Query  71   earrllaDGIDPGEHKKVMKQVANERSANSFEVVAREWFVKYSSNWVKSHADKIMQRFLR  130
            +AR+++++G DPGE K+  K   +  ++N+F+ +A EW    S +W  S A  +++ + +
Sbjct  70   DARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDK  129

Query  131  DIFPWIGNKPITEVTPPVLLSVIRRIEERGALETAHRALSNCGQVFRYAIATGRAERDSS  190
            DIFP +G++++T++ P  +L ++RRIE RG+LE  ++    C Q+FRYAIATGRA  +++
Sbjct  130  DIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPA  189

Query  191  QDLRGALPPVKTKHFAAQTDPKRFGDLLKIFDDYQGSLIVRSALRLAPLFFVRPGELRHA  250
             +L ++L++ K+ HF ++  +  +  +L+ + +Y+GS + R A  L  L  +R  ELR A
Sbjct  190  SELTSTLAAPKAAHF-PHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSA  248

Query  251  QWEDFDFDKAQWSFIVTKTNTP--HIVPLATQALEILAELQPLTGNSTYVFPSARSNSRP  308
            +W ++DFD+A W++  ++ +    H+VPL+ Q  +IL +L+ ++G+   VFP+    ++P
Sbjct  249  EWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKP  308

Query  309  MSDNAILAALRRLGISKEEASGHGFRATARTLLDEVLRVRPDIIEHQLAHAVRDPNGRAY  368
            MS+ +I   L+R+G     A+GHGFR T  T+L+E     +  IE QLAH  +++   +Y
Sbjct  309  MSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTY  366

Query  369  NRTAHLIERKKMMQDW-ADYLDRL  391
            N++  +  R+ MMQ W ADY+D L
Sbjct  367  NHALYIDGRREMMQ-WYADYIDSL  389

524) Mesau_02378 in NC_019973


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (873),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 249/397 (63%), Gaps = 11/397 (2%)

Query  1    MALSDVKCRNARPVSKLVKLTDGGGLQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLIS  60
            MAL+  +   ARP  K  KL+D  GL L V+ TG+R WRL YR++GK+K LALG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREARDTAKRLLLRGIDPALERK----LQKASAEDTFRSIAEDYVDK--LKKEGRAD  114
            LAEAR  RD A++++  G DP+  ++     QK SA +TF+++A +  +   L       
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  115  RTITKVKWLLDFAYPAFGDKCVREIDPVTILAALRSVEDRGRYESARRLRSTIGSVFRYA  174
            R++     L    +P +G + V +I P+ +L  LR +E RG  E  R++R     +FRYA
Sbjct  121  RSVLEA--LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  175  IATARADLDPTVALRGALVGPTVTPRAAVTDPMALGGLLRAINAFDGQPTTRAALKLMAL  234
            IAT+RA ++P+  L ++L +P  +  + +     L  +LR +  ++G P TR A +L+ L
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  235  LFPRPGELRAAGWDEFDFESSVWSIPEGRMKMRRPHRVPLSRQAVGVLTSLRRISGGGSL  294
               R  ELR+A W E+DF++++W+IPE+RMKMRR H VPLSRQ  ++L  L+ +SG   L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  295  LFPSVRSGLRPISDNTLNAALRRMGYGKEEATAHGFRATASTLLNECGKWHPDAIERQLA  354
            +FP+     +P+S+ ++N  L+R+GY+   AT+HGFR T ST+L+E G  ++  IE QLA
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  355  HVENNDVRRAYARAEHWEERVKMMQWWADYLEELASK  391
            HV++N +R +Y +A   + R  MMQW ADY++ L+ +
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

525) Mesci_2349 in NC_014923


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (873),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 249/397 (63%), Gaps = 11/397 (2%)

Query  1    MALSDVKCRNARPVSKLVKLTDGGGLQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLIS  60
            MAL+  +   ARP  K  KL+D  GL L V+ TG+R WRL YR++GK+K LALG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREARDTAKRLLLRGIDPALERK----LQKASAEDTFRSIAEDYVDK--LKKEGRAD  114
            LAEAR  RD A++++  G DP+  ++     QK SA +TF+++A +  +   L       
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  115  RTITKVKWLLDFAYPAFGDKCVREIDPVTILAALRSVEDRGRYESARRLRSTIGSVFRYA  174
            R++     L    +P +G + V +I P+ +L  LR +E RG  E  R++R     +FRYA
Sbjct  121  RSVLEA--LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  175  IATARADLDPTVALRGALVGPTVTPRAAVTDPMALGGLLRAINAFDGQPTTRAALKLMAL  234
            IAT+RA ++P+  L ++L +P  +  + +     L  +LR +  ++G P TR A +L+ L
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  235  LFPRPGELRAAGWDEFDFESSVWSIPEGRMKMRRPHRVPLSRQAVGVLTSLRRISGGGSL  294
               R  ELR+A W E+DF++++W+IPE+RMKMRR H VPLSRQ  ++L  L+ +SG   L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  295  LFPSVRSGLRPISDNTLNAALRRMGYGKEEATAHGFRATASTLLNECGKWHPDAIERQLA  354
            +FP+     +P+S+ ++N  L+R+GY+   AT+HGFR T ST+L+E G  ++  IE QLA
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  355  HVENNDVRRAYARAEHWEERVKMMQWWADYLEELASK  391
            HV++N +R +Y +A   + R  MMQW ADY++ L+ +
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

526) Mesop_2493 in NC_015675


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (873),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 249/397 (63%), Gaps = 11/397 (2%)

Query  1    MALSDVKCRNARPVSKLVKLTDGGGLQLWVQPTGSRLWRLAYRFGGKQKLLALGSYPLIS  60
            MAL+  +   ARP  K  KL+D  GL L V+ TG+R WRL YR++GK+K LALG YP +S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAEAREARDTAKRLLLRGIDPALERK----LQKASAEDTFRSIAEDYVDK--LKKEGRAD  114
            LAEAR  RD A++++  G DP+  ++     QK SA +TF+++A +  +   L       
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  115  RTITKVKWLLDFAYPAFGDKCVREIDPVTILAALRSVEDRGRYESARRLRSTIGSVFRYA  174
            R++     L    +P +G + V +I P+ +L  LR +E RG  E  R++R     +FRYA
Sbjct  121  RSVLEA--LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  175  IATARADLDPTVALRGALVGPTVTPRAAVTDPMALGGLLRAINAFDGQPTTRAALKLMAL  234
            IAT+RA ++P+  L ++L +P  +  + +     L  +LR +  ++G P TR A +L+ L
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  235  LFPRPGELRAAGWDEFDFESSVWSIPEGRMKMRRPHRVPLSRQAVGVLTSLRRISGGGSL  294
               R  ELR+A W E+DF++++W+IPE+RMKMRR H VPLSRQ  ++L  L+ +SG   L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRL  297

Query  295  LFPSVRSGLRPISDNTLNAALRRMGYGKEEATAHGFRATASTLLNECGKWHPDAIERQLA  354
            +FP+     +P+S+ ++N  L+R+GY+   AT+HGFR T ST+L+E G  ++  IE QLA
Sbjct  298  VFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  355  HVENNDVRRAYARAEHWEERVKMMQWWADYLEELASK  391
            HV++N +R +Y +A   + R  MMQW ADY++ L+ +
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQ  392

527) Vapar_4495 in NC_012791


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (873),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 161/395 (41%), Positives = 262/395 (67%), Gaps = 7/395 (1%)

Query  1    MALTDTFVRQVKPTGKANGDKYADGAGMYLLVKTAG-KYWRMDYTFAGKRKTLALGTYPE  59
            MALT   V   +P  K    K +D  G+YLLVKT+G +YWR+ Y +AGK K LALG YP+
Sbjct  1    MALTARQVETARPKEKDY--KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPD  58

Query  60   VSlakardrraaarellaDGTDPSaakreekraradaaaNTFEAVAREWLGKTAAKRASG  119
            VSLA AR +R  AR ++++G DP+  KR EK ++  +A+NTF+A+A EW    +  ++ +
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  120  TQLKVKTWLEKDVFPFIGKMPISTIGPRDILERVVRKLEARGAIDTAHRVKQLCGQVFRF  179
                V   L+KD+FP++GK +++ I P ++LE ++R++E RG+++  ++V+Q C Q+FR+
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLE-ILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  180  AVVSGLAERDVTADLSEALASKATRHFAAITEPKRVGDLMRSIHAYSGHPTTVAALKLSP  239
            A+ +G A  + +++L+ +LA+  + HF+ +  +  +  ++R +  Y G P T  A +L  
Sbjct  178  AIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  240  LLFVRPGELRTAEWAEIDLDAAEWRIAGPKMKMKVDHVVPLATQAVEILRDLHPITGHGR  299
            L  +R  ELR+AEW+EID+D A W I+ ++MKM+  HVVPL+ Q  +IL++L  ++G+ R
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  300  FVFPSIRTGERPMSENTINAALRGMGYSAEVHTAHGFRATARTIMDEVLGERVDFIEHQL  359
            +VFP+    ++PMSE +IN  L+ +GY +   T+HGFR T  TI++E  G     IE QL
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  360  SHMVRDTNGRAYNRTAHLPARREMMQRWADYLDKL  394
            +H+ +++   +YN++  + +RREMMQ+ ADY+D L
Sbjct  355  AHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

528) Alide_1445 in NC_014910


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (871),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 156/382 (41%), Positives = 246/382 (65%), Gaps = 12/382 (3%)

Query  20   RFADSGGLYLEVTPNGSKRWFWKYRFDGKEKRIAFGSYPDVKLKEARTARDDARKLHQQG  79
            +++D  GLYL V   G++ W  KYR+ GKEK++A+G YPDV L EAR  RDDARK+  +G
Sbjct  19   KLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEG  78

Query  80   IDPAQKRQLDRLENKRQADVTFEAVAREFHATKASGWSKQYGERWIERMEKDLFPWIGAL  139
             DP++K++ ++L +K  A  TF+A+A E H  K+ +WS  Y+   +E ++KD+FP +G  
Sbjct  79   GDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKR  138

Query  140  PLATITAPMLLHALRRTEARGAKETAHTLRQTAGQVFRYGIATGRCERNPAPDLHGALAP  199
            +++ I +  +L+ LRR E RG+ E  + +RQ   Q+FRY+IATGR   NPA++L ++LA+
Sbjct  139  SVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAA  198

Query  200  LNVKHMAAVLDADSAGKLMRAIFDYEGQPSTRAALELSALLFQRPGNIRHMEWVEIDLDA  259
             +  H +  L AD    ++R + +Y+G P TR A +L  L   R  ++R  EW EID+D 
Sbjct  199  PKAAHFPH-LRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDN  257

Query  260  ALWTIPADKMKRTIYGKTNGRPHFVPLAPRAIQILKDLKPLTGHGKYVFPSLLTGERAMS  319
            ALWTIP  +MK         R H VPL+ +  +IL++LK ++G+ + VFP+    +++MS
Sbjct  258  ALWTIPESRMKMR-------RKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMS  310

Query  320  ENTIRTALRRMGYTNDEMTPHGFRAMARTIMVERLNMHPDVIEAQLAHGKSGPLGAAYDR  379
            E +I   L+R+GY ++  T HGFR    TI+ E+   ++  IE QLAH    ++ ++Y++
Sbjct  311  EASINMVLKRIGY-DGRATGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYNH  368

Query  380  AQFMEQRRQMMNEW-ADYLDKL  400
            A +++ RR+MM +W ADY+D L
Sbjct  369  ALYIDGRREMM-QWYADYIDSL  389

529) Pecwa_1693 in NC_013421


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  234 bits (871),  Expect = 8e-63, Method: Compositional matrix adjust.
 Identities = 166/409 (41%), Positives = 263/409 (65%), Gaps = 28/409 (6%)

Query  1    MSLNDSKIRKLKPSAKSFKVSDSHGLYLLVNSSGSRLWYLKYRINRKESRLGLGAYPDVS  60
            M+L   ++   +P  K +K+SD +GLYLLV+++G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLAQNINPAQQRSAERTTS--SPEKTFKHVALEWHKSNR-SWSENHA  117
            LA+AR +RD+ RK++++  +P++++  E+ T   S+ +TF  +A EWH+ +  SWSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ARLLASMNNHIFPIIGHLPVTELKTRHFIDllkgiekkglleVTARTRQHMCN-IMRHAV  176
              +L +++++IFP +G  +VT++   + +++L+ IEK+G LE   + RQ  CN I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIENNPAANLDGIIAPPVKRHYpalplerlpellaSIEDYKQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  + LP +L  + +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEINFRNKIWTIPATRESIPGVRYSGRGAKMRTPHIVPLSRQSIAILK  296
             +R+ ELR A WSEI+F N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIRDISGHQELIFPGDHNPYKPMCENTVNKALRLMGYDTKDEVCGHGFRTMACSALMESG  356
            Q++ +SG+  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  ---VWPQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLDT  402
                W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDS  388

530) Rahaq2_1748 in NC_016818


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  233 bits (870),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 165/408 (41%), Positives = 264/408 (65%), Gaps = 28/408 (6%)

Query  1    MSLNDSKIRNLKPSEKPFKISDSHGLYLLVNPGGSRLWYLKYRIDGKESRLGLGAYPDVS  60
            M+L   ++   +P EK +K+SD +GLYLLV+  G+R W LKYRI GKE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLAQNINPAQQRSAERATS--SPEKTFKYVALDWHKSNR-TWSENHA  117
            LA+AR +RD+ RK++++  +P++++  E+ T   S+ +TF  +A +WH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  SRLLASMNNHIFPVIGHLPVAELKPRHFIDLLKGIEQKGLLEVAARTRQHMCN-IMRHAI  176
              +L +++++IFP +G  +V+++ P + +++L+ IE++G LE   + RQ  CN I R AI
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQDLIKNNPAANLEGIIAPPVKRHYpalplerlpellarIEDYQQGREltrlavlltlhl  236
              +    NPA++L + +A+P   H+P L  + LP +L ++ +Y +G  +TR+A  L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFACWSEIDFKNRIWTIPATREAIPGVRYSERGAKMRTPHIVPLSRQSIAILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIREISGHRVLIFPGDHNPYKPMCENTVNKALRLMRYDTKNEICGHGLRAMACSALMESG  356
            Q++ +SG+  L+FPG  +  KPM E ++N  L+ + YD +    GHG+R    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQG  344

Query  357  L---WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLD  401
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

531) SBO_4322 in NC_007613


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  233 bits (869),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 140/327 (43%), Positives = 210/327 (65%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGTGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G++LLV   G+RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWAQSHS  117
            L+EAR KRD+ARK+ISEG DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQTVTQLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G  VT++A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR A WSEID+DNA+WTIP  R             KMR  H+VPLS+Q   IL +L
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +T +G+  L+F G  D  KP+SE  +N
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASIN  315

532) LFML04_0012 in NC_018649


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  232 bits (864),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/340 (44%), Positives = 231/340 (68%), Gaps = 6/340 (1%)

Query  1    MGVYPETSLrearerrdeakkkieSGIDPSHARKAKK--ESDSGADTFETIAREWFEKFS  58
            +GVYP+ SL EAR +RD+A+K I  G DP++ ++  K  +  S+++TF+++A EW +  S
Sbjct  53   LGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKS  112

Query  59   PTWSPSHGDRIIRRLERDIFPWLGKRSIKDIKAPEFLAVLRRIESRGAVETAHRASQNCG  118
             +WS S +  ++  L++DIFP LGKRS+ DI + E L +LRRIE RG++E  ++  Q C 
Sbjct  113  LSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCN  172

Query  119  QVFRYAAAMGRTEGDPSGDLRGAIPPTTTKHHASITDPKEIGGLLRAIDSYEGGLVVRCA  178
            Q+FRYA A GR+  +P+++L +++++  + H + +  + E+  +LR +  Y+G+ V R A
Sbjct  173  QIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMA  231

Query  179  LKLAPLVFVRPGELRRAEWSEIDFEKMEWRIPAEKMKMREQHIVPLSRQALGILRELQPL  238
             +L  L  +R  ELR AEWSEIDF++  W IP  +MKMR +H+VPLSRQ  +IL++L+ +
Sbjct  232  TNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTF  291

Query  239  TGEGKYLFPSPRSWDRPMSENAVLAALRRMGYSGDQMTGHGFRSMASTILIEQGWNRDAI  298
            +G+ + +FP+    ++PMSE ++   L+R+GY G + TGHGFR   STIL EQG N   I
Sbjct  292  SGQYRLVFPGRCDINKPMSEASINMVLKRIGYDG-RATGHGFRHTMSTILHEQGFNSAWI  350

Query  299  ERQLAHAERDEIRAAYNYAQHLPERRKMMQAW-ANYLDEL  337
            E QLAH +++ IR++YN A  +  RR MMQ W A+Y+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDSL  389

533) EJP617_01070 in NC_017445


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 149/364 (41%), Positives = 233/364 (65%), Gaps = 2/364 (0%)

Query  7    PLTNNEILKAKPREKDFTLHDGDGLFLLVKTTGKKLWRFRYQRPVSGSLTNLSLGSYPAL  66
            +LT  ++  A+P+EKD+ L D  GL+LLVKTTG + WR++Y+  ++G   +L+LG YP +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR--IAGKEKKLALGVYPDV  59

Query  67   TLAAARQIRDQHLTTLAQGMDPqqqqelaseqrqFELGSIFSTVAANWFQLKSKSVTEDY  126
            +LA AR  RD+    +++G DP +++      +++   + F ++A++W Q KS S +E Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  AKDIWRSLDKDVFPAIGSIPVQEIKARTIVEALEPIKARGALETVRRLVQRVNEIMIYAV  186
            A+ +  +LDKD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q  N+I  YA+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLVDANPASGVGMAFEKPKKQNMPTLRPEELPRLMRSLVMSNLSVATRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGARWAEIDLDTKLWTIPAERMKAKREHIVPLSPQALDIIEVMKPVSAHREHVL  306
            +R  E  +A W+EID+D  LWTIP  RMK +R H+VPLS Q  DI++ +K  S++   V+
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTALNEHCFNADVIEAALAHCDK  366
            P+R D ++PM+  + N  LKRIGY+G+  +HG+R   ST L+E+ FN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVR  370
            N +R
Sbjct  360  NSIR  363

534) Fraau_1988 in NC_017033


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 162/398 (41%), Positives = 256/398 (65%), Gaps = 15/398 (3%)

Query  1    MPLTDTAARKAAPRDKSYRLPDGGGMYLEVMPNGSRYWRLKYRFGGKEKRLALGVYPGIS  60
            M+LT      A P++K Y+L+D  G+YL V   G+RYWRLKYR++GKEK+LALGVYP++S
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   ladarkrredarrlladGIDPGAARKEAKQEATAEAGGAVTFEQVARQWLARQDVA--EV  118
            LA+AR +R+DAR+++++G DPG  ++  K+  T   +++ TF+ +A +W  ++ ++  E 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKR--KEKLTQKISATNTFHALATEWHQHKSLSWSES  118

Query  119  TANKNQWLLEEYLFPSIGQRPIADITPRELLAALRETEDKGLLETARRSKIKAGQVFRYA  178
             A      L+  +FP +G+R+++DI P E+L  LR  E +G LE  R+ +    Q+FRYA
Sbjct  119  YARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYA  178

Query  179  IIEGLCEADPMASLRGALKTTRNRHHAAITDPVQIGGLMRAMDGFAGTFTVRCA---LLL  235
            I  G    +P + L ++L + +  H + +    ++  ++R +  + G+   R A   LLL
Sbjct  179  IATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  236  SALLFVRPGELRKAEWAEMDLDGAMWRIPGEKMKMGAPHLVPLSEQALAILRDLHGLTGH  295
            ++L   R  ELR AEW+E+D+D A+W IP  +MKM   H+VPLS Q   IL++L  ++G+
Sbjct  238  TGL---RTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQ  294

Query  296  ARYVFSGLRTDSRPMSENTVNTALRALGYDKATMTAHGFRSMAATRLNEMGWNADAIERQ  355
             R VF+G    ++PMSE ++N  L+ +GYD +  T+HGFR   +T L+E G N+  IE Q
Sbjct  295  YRLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEMQ  353

Query  356  LAHAESNKVRDAYTSQAQYLPERQKMMQAW-ADYLDSL  392
            LAH + N +R++Y ++A Y+  R+ MMQ W ADY+DSL
Sbjct  354  LAHVDKNSIRGTY-NHALYIDGRREMMQ-WYADYIDSL  389

535) W5S_1636 in NC_017845


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 166/413 (41%), Positives = 263/413 (64%), Gaps = 28/413 (6%)

Query  1    MSLNDSKIRNLKPSAKPFKVSDSHGLYLLVNPGGSRLWYLKYRINRKESRLGLGAYPDVS  60
            M+L   ++   +P  K +K+SD +GLYLLV+  G+R W LKYRI  KE +L+LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADARQQRDGIRKLLVQNINPAQQRSAERSTS--SPEETFKSVALSWHKSNR-AWSENHA  117
            LA+AR +RD+ RK++ +  +P++++  E+ T   S+ +TF ++A  WH+ +  +WSE+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ARLLASMNNHIFPIIGHLPVTELKTRHFIDllkgiekkglleVAARTRQHMCN-IMRHAV  176
              +L +++++IFP +G  +VT++   + +++L+ IEK+G LE   + RQ  CN I R A+
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY-CNQIFRYAI  179

Query  177  HQELIEHNPAANLDGIVAPPVKRHYpalplerlpellaSIEDYKQGRELTRLAVSLTLHL  236
                   NPA++L + +A+P   H+P L  + LP +L  + +Y +G  +TR+A +L L  
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEY-HGSPVTRMATNLLLLT  238

Query  237  FIRSSELRFARWSEIDFRNKIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQSVAILK  296
             +R+ ELR A WSEIDF N +WTIP +R             KMR  H+VPLSRQ   IL+
Sbjct  239  GLRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQ  286

Query  297  QIREISGHQELIFPGDHNRYKPMCENTVNKALRVMGYDTKDEICGHGFRAMACSALMESG  356
            Q++ +SG+  L+FPG  +  KPM E ++N  L+ +GYD +    GHGFR    + L E G
Sbjct  287  QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQG  344

Query  357  L---WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLDTNREE  406
            +   W    +E Q++H ++NS+R++Y H A Y+D+R+ MMQW +DY+D+  E+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYIDSLSEQ  392

536) BCAL1118 in NC_011000


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  232 bits (864),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 168/405 (42%), Positives = 273/405 (68%), Gaps = 20/405 (4%)

Query  1    MPLTDVTIRKASPREKPYRLADGGGMYLEVSPSGGKYWRFKYRFAGKEKRLALGVYPDVP  60
            M+LT   +  A P+EK Y+L+D  G+YL V  +G++YWR+KYR+AGKEK+LALGVYPDV+
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LaaarekrdearkTLAGGVDPGeakkaekraallaaTNSFEAVALGWMEERKPYVTSGSW  120
            LA AR KRD+ARK ++ G DPGE K+ EK +  ++ATN+F+A+A  W +++     S SW
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHK-----SLSW  115

Query  121  GKTKARFV-----KDVFPWLGKRPIAEIDAPEVLTVLKRIDSRGARFTAHKVRSEISRVF  175
            + + AR V     KD+FP LGKR++++I + E+L +L+RI+ RG+    +KVR   +++F
Sbjct  116  SESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIF  175

Query  176  RYGIKEGYCKVDAARDLTDAIPPAQTTHFASITDPEKVGAMLRAFDGFSGTFPVLCALKL  235
            RY+I  G   V++A +LT ++++++++HF+ +  ++ +   LR +  + G+ PV   +  
Sbjct  176  RYAIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGS-PV-TRMAT  232

Query  236  APMLFT--RPGELRKAEWAQFDLDKGEWRYLVTKTKT--EHLVPLAQQAIQILRELHALT  291
              +L+T  R  ELR AEW+++D+D++ W    ++ K    H+VPL++Q  +IL++L +++
Sbjct  233  NLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFS  292

Query  292  GSGRYVFPGARSALRPMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEV  351
            G  R VFPG     +PMS+A++N  L+R+GYD R+  TGHGFR    TILHE+   ++  
Sbjct  293  GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAW  349

Query  352  IEHQLAHAVPDNLGKAYNRTKFIKERRAMMQKWADYLEKLKADIG  396
            IE QLAH   +++  +YN++ +I  RR MMQ  ADY++ L  +++
Sbjct  350  IEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

537) Fraau_2605 in NC_017033


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 159/375 (43%), Positives = 250/375 (67%), Gaps = 12/375 (3%)

Query  23   DGGGLHLKVEATGRKYWRYDFRIAGKPDTFAVGVYPKVTLAEARLRHAEASALVSQGINP  82
            D  GL L V +TG +YWR  +RIAGK   +A+GVYP V+LAEAR+++ +A  ++S+G +P
Sbjct  22   DERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDP  81

Query  83   kahkrakqaaavvanantfqavaDEWMAQQKPKMA-KATYDKAMWMLADL---VYPWLGK  138
               KR  + +  ++ +NTF+A+A EW  +Q   ++   +Y +++  L  L   ++P LGK
Sbjct  82   GEKKRKEKLTQKISATNTFHALATEW--HQHKSLSWSESYARSV--LEALDKDIFPYLGK  137

Query  139  RPISEIDAPELLAVLRRIEERGANETAHRTKQRCGQIFRYAIATGRAKHDPSGDLRGALA  198
            R++++I + E+L +LRRIE RG+ E  ++ +Q C QIFRYAIATGRA  +P+++L ++LA
Sbjct  138  RSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLA  197

Query  199  PPITKSRAAITDPQKVGELLRAIDGYSGSFSVICALRLAPMLFVRPGELRHAEWAEFDLD  258
            +P + ++ +   ++ +  +LR +  Y GS     A  L  +  +R  ELR AEW+E+D+D
Sbjct  198  APKA-AHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFD  256

Query  259  QGLWRIPAEKMKMRDEHLVPLPDQALAILRDLLPLTGPDGYLFPGERSASRPMSENTVNA  318
            ++LW IP  +MKMR  H+VPL+ Q   IL++L  ++G    +FPG    ++PMSE ++N 
Sbjct  257  NALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINM  316

Query  319  ALRRLGYDKDTMTGHGFRAMASTRLNELGWSPDVIERQLAHAERNKVRAAYNRAQYLPER  378
             L+R+GYD +  TGHGFR   ST L+E G ++  IE QLAH ++N +R++YN+A Y+  R
Sbjct  317  VLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGR  375

Query  379  QRMMQAW-ADYLDSL  392
            + MMQ W ADY+DSL
Sbjct  376  REMMQ-WYADYIDSL  389

538) ECP_1962 in NC_008253


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

539) ECABU_c22620 in NC_017631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

540) c2449 in NC_004431


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

541) i14_2259 in NC_017652


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

542) i02_2259 in NC_017651


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

543) ECOK1_2168 in NC_017628


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

544) intA_3 in NC_022370


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

545) UM146_07190 in NC_017632


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

546) UTI89_C2204 in NC_007946


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 259/407 (64%), Gaps = 26/407 (6%)

Query  1    MSLNDAKIRSLKPTDKPFKVSDSHGLYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVS  60
            M+L   ++ + +P +K +K+SD +GLYLLVK  G+R W LKYRI GKE ++ALG YP VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSDARQQREGIRKMLALNINPAQQRAAERGSRM--QEKMFKSVALEWHSSKK-KWSQNTA  117
            L++AR +R++ RK+++   +P++++  E+ ++     + F ++A EWH  K   WS++ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DRVLARLNRHVFPTIGHLPVTELKSRHFiellkgieekglleVASRSRQHLSNIMRYAVH  177
              VL  L++++FP +G  +VT++ + + +E+L+ IE +G LE   + RQ  ++I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  QGLIEINPAANLDGVTASPARRHYPTlplerlpellerIDSYHQGRELTRLAVLLTLHVF  237
             G   +NPA++L +  A+P   H+P L  + LP +L ++  YH G  +TR+A  L L   
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYH-GSPVTRMATNLLLLTG  239

Query  238  IRSSELRYARWTEINFRNRIWTIPATREAIAGVRYSSRGAKMRTPHIVPLSEQVISILKR  297
            +R+ ELR A W+EI+F N +WTIP +R             KMR  H+VPLS QV  IL++
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

Query  298  IKEISGGYELVFPGYHDPYKPMSENTINKALRQMGYNTKQDICGHGFRAMACSALMESGL  357
            +K +SG Y LVFPG  D  KPMSE +IN  L+++GY+ +    GHGFR    + L E G+
Sbjct  288  LKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFRHTMSTILHEQGF  345

Query  358  ---WSQDAVERQMSHQERNTVRLAYIHKAEHMEARMDMMQWWSDYLD  401
               W    +E Q++H ++N++R +Y H A  +++R +MMQW +DY+D
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-ALYIDGRREMMQWYADYID  387

547) BDL_973 in NC_021884


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  230 bits (856),  Expect = 8e-62, Method: Compositional matrix adjust.
 Identities = 133/288 (47%), Positives = 200/288 (70%), Gaps = 3/288 (1%)

Query  1    MPLTDKAVKNAKAGDKPVKLFDGGGMFLLVTPAGQRYWRLKYRVNGKEKLLALGVYPDVS  60
            M+LT + V  A++ +K  KL D  G++LLV  +G RYWRLKYR+ GKEK LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LAVARKKRDEAREKLAAGIDPNEAKREVKRTARIAAASSFEAVAREWFDNQRVGWTETYA  120
            LA AR KRD+AR  ++ G DP E KR  K T +I+A+++F+A+A EW +++ ++W+E+YA
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  EKVIHSLEIDAFPKIGSRPISSIEAPEMLEIIRAIEARGVRETAKRLLQRSRAVFQYAIM  180
              V+++L+ D FP +G R+++ I + EMLEI+R IE RG  E  +++ Q    +F+YAI 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  181  TGRCTRNPSADIDAETILKKGPGVQHMARVKPLEIPQLMRDIAAYPGEPVTRLALELMAL  240
            TGR T NP++++ +      +P   H +++++ E+P ++R +A Y G PVTR+A +L+ L
Sbjct  181  TGRATVNPASELTSTLA---APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLL  237

Query  241  TFVRTKEMIRAQWAEFDEAAAEWRVPPERMKMRDPHIVPLSRQSLVVL  288
            T +RT E+  A+W+E+D   A W +P  RMKMR  H+VPLSRQ   +L
Sbjct  238  TGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDIL  285

548) RPC_0628 in NC_007925


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  229 bits (855),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 157/391 (41%), Positives = 254/391 (65%), Gaps = 16/391 (4%)

Query  13   KPAEKDYKRSDSGGLFMLVTKTGSKLWRYGYNFDAKQKLLALGQYPLISLADARTKRDDA  72
            +P EKDYK SD  GL++LV  TG++ WR  Y + +K+K LALG YP +SLA+AR KRDDA
Sbjct  12   RPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDA  71

Query  73   KRLLAEGIDPSVERKAERRDARIARSHTFEAVAKELMDKFE---AEGDAPTTLKKKQWLL  129
            +++++EG DP+  ++ E+   +I+ ++TF+A+A E  +      +E+ A + L       
Sbjct  72   RKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARSVLE------  125

Query  130  DFANKEF---GKRPIAEIKAPEILDALRKIEKRGRHETATRVRSTVGAVFRYGIATGRAE  186
             + +  F   GKR++++I + E+L+ LR+IEKRG  E   +VR     +FRY+IATGRA 
Sbjct  126  ALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRAT  185

Query  187  QDPAADLRGALITPTVTHRATIVEPDAVGALLRAIDGFEGNAAIRYALRLAPLFFVRPGE  246
             +PA++L ++L +P  +H + +  +D +  +LR +  ++G++  R A  L  L  +R  E
Sbjct  186  VNPASELTSTLAAPKAAHFPHL-RADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIE  244

Query  247  LRKAEWAEFKLENAEWRIPAAKMKMRRPHRVPLAHQALSILRELQGITGGSKYLFPSVRS  306
            LR AEW+E+ ++NA W IP ++MKMRR H VPL++Q   IL++L+ ++G  + +FP+   
Sbjct  245  LRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCD  304

Query  307  WHRPISDNTLNAVLRRLGYDKTELTVHGLRSTASVLLNESGKWHADAIERQLAHQEQNEV  366
             ++P+S+ ++N VL+R+GYD    T HG+R T S +L+E G  ++  IE QLAH ++N +
Sbjct  305  INKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKNSI  362

Query  367  RGAYIHAAEFWDERVRMMCWWADELDRLRDH  397
            RG+Y HA  + D R  MM W AD +D L ++
Sbjct  363  RGTYNHAL-YIDGRREMMQWYADYIDSLSEQ  392

549) TY21A_13395 in NC_021176


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 252/387 (66%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGTFPal  66
            +LT  +V  A++ EKD  L D  GL+LLVKT G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   sladarrlradylsllaNGIDPqiqaeiaeeqqqiaqDSIFTTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  ARDIWRSLEKDVFPAVGELPVQQIKARTLVEALEPVKARGALETVRRLVQRINEIMIFAV  186
            AR +  +L+KD+FP +G  +V +I +  ++E L  +  RG+LE +R++ Q  N+I  +A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVSTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R LA  + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGTQWAEIDLENKLWTIPAGRMKAKREHIVPLSVRALDILEIMKPISAHREYVF  306
            +R  E  +++W+EID++N LWTIP +RMK +R H+VPLS +  DIL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNNPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEEGFNPDVIEAALAHSDK  366
            P+R + ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E+GFN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRKAYNRSTYLYQRIDLMNWWANFV  393
            N +R +YN++ Y+  R ++M+W A+++
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

550) t2647 in NC_004631


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 252/387 (66%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLLVKTNGKKLWRFRYQRPATKQRTMMGLGTFPal  66
            +LT  +V  A++ EKD  L D  GL+LLVKT G + WR++Y R A K++ + +LG +P +
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKL-ALGVYPDV  59

Query  67   sladarrlradylsllaNGIDPqiqaeiaeeqqqiaqDSIFTTVAANWFQLKSKSVTPDY  126
            SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q KS S +  Y
Sbjct  60   SLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESY  119

Query  127  ARDIWRSLEKDVFPAVGELPVQQIKARTLVEALEPVKARGALETVRRLVQRINEIMIFAV  186
            AR +  +L+KD+FP +G  +V +I +  ++E L  +  RG+LE +R++ Q  N+I  +A+
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  187  NTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVSTRCLIEWQLLTL  246
             TG    NPAS +  ++  PK  + P LR++ELP ++R LA  + S  TR   +  LLT 
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  247  VRPSEASGTQWAEIDLENKLWTIPAGRMKAKREHIVPLSVRALDILEIMKPISAHREYVF  306
            +R  E  +++W+EID++N LWTIP +RMK +R H+VPLS +  DIL+ +K +S++   VF
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  307  PSRNNPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEEGFNPDVIEAALAHSDK  366
            P+R + ++PM+  + N  LKRIGY+G+  +HG+R   ST ++E+GFN+  IE  LAH DK
Sbjct  300  PGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRKAYNRSTYLYQRIDLMNWWANFV  393
            N +R +YN++ Y+  R ++M+W A+++
Sbjct  360  NSIRGTYNHALYIDGRREMMQWYADYI  386

551) Msil_1557 in NC_011666


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  224 bits (834),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 165/399 (42%), Positives = 267/399 (67%), Gaps = 17/399 (4%)

Query  1    MALTDMEIRAAKPSARIVKLSDGGGLQLWLMPDGAKRWRLAYRFAGGQKLLAIGVYPAIG  60
            MALT  ++ +A+P  +  KLSD  GL L +   GA+ WRL YR+AG +K LA+GVYP ++
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LrearearegaKRILAEGNDPslakklakaakatasaNTFDAVSTELLDKKR---REGKA  117
            L EAR  R++A++I++EG DP+  K+  K ++  +++NTF+A++TE  + K     E+ A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  ERTLDKLGW-LFSLARPAIGVRPIAEISAREILAVLRSVESRGTHETAKRLRATISEVFR  176
               L+ L+  +F    P +G R++++I + E+L +LR +E RG+ E  +++R   +++FR
Sbjct  121  RSVLEALDKDIF----PYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  177  YAVATDRADSDPTVALKGALAAPIVKHRAAIIEPKAFGGLLRAIATYEGSPETCaalell  236
            YA+AT+RA  +P+  L ++LAAP   H  + + +  +  +LR +A Y+GSP T  A +LL
Sbjct  177  YAIATGRATVNPASELTSTLAAPKAAH-FPHLRADELPVFLRKLAEYHGSPVTRMATNLL  235

Query  237  alTFVRPGELRAAEWVEFDFDNGVWSIPGEKMKMKRPHRVPLAARAVGLLQELQTITGHG  296
             LT +R  ELR+AEW E+DFDN++W+IP  +MKM+R H VPL+ +  ++LQ+L+T++G+ 
Sbjct  236  LLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY  295

Query  297  KFLFPSVRSAARCMSENTINAALRRLGFEKDEMTGHGFRSAASSMLNESGL---WNPDAI  353
            +++FP+     + MSE +IN  L+R+G++ +  TGHGFR + S++L+E G+   W    I
Sbjct  296  RLVFPGRCDINKPMSEASINMVLKRIGYD-GRATGHGFRHTMSTILHEQGFNSAW----I  350

Query  354  ERQLAHVDNDSVRRAYARADYWDERIRMMSWWADRCEEL  392
            E QLAHVD++S+R +Y +A Y D R  MM W AD  + L
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSL  389

552) RORB6_03735 in NC_021066


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  223 bits (830),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 152/378 (41%), Positives = 233/378 (62%), Gaps = 2/378 (0%)

Query  2    LTDTQCRTAKPKEKLYRLNDFNGLYLEVKPNGKKAWRYRFKLNGKSSMFALGEYPTVKLA  61
            LT  Q  TA+PKEK Y+L+D  GLYL VK  G + WR ++++ GK   +ALG YP V LA
Sbjct  3    LTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLA  62

Query  62   EAREKCEQARKQVADGVSPTQARQLDKIRKVNDASNTFELIAKEWLQMKD--WAEITKTR  119
            EAR K ++ARK +++G  P + ++ +K+ +   A+NTF+ +A EW Q K   W+E     
Sbjct  63   EARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYARS  122

Query  120  RLDMLERVVFPAIGKLPVREITPHHILKILQETAKRGAPTVAAEARRTISSVFELAVATL  179
             L+ L++ +FP +GK +V +I P ++L IL+   KRG+       R+  + +F  A+AT 
Sbjct  123  VLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATG  182

Query  180  RADSDPVWPVRKALPANKTQHKQALNPQQIGKLLSCFDNSRGSYQVNYCMWLMWWTLARP  239
            RA  +P   +  +L+A K+ H   L ++++  +L  + + +GS        L+  T  R 
Sbjct  183  RATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRT  242

Query  240  AEATEAEWTEFDLDNALWTIPAARMKARREHVIPLPFQAVKMLRTLQGLTGHRQHLFPGR  299
             E   AEW+E+D+DNALWTIP +RMK RR HV+PL+ Q   +L+ L+ ++G+ + +FPGR
Sbjct  243  IELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGR  302

Query  300  DNPLGPMTSHSLRQLLKSLGWSGTYSPHATRTTGSTRLNELGYRPDAIEAQLAHADTNNV  359
             +   PM+  S+  +LK +G  G  + H+ R T ST L+E G+ +  IE QLAH D N++
Sbjct  303  CDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSI  362

Query  360  RRTYNHATYLDERKVMMQ  377
            R TYNHA Y+D R+ MMQ
Sbjct  363  RGTYNHALYIDGRREMMQ  380

553) PAU_03975 in NC_012962


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  221 bits (824),  Expect = 3e-59, Method: Compositional matrix adjust.
 Identities = 126/291 (44%), Positives = 196/291 (68%), Gaps = 15/291 (5%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPEVS  60
            MALT  +V TA+P +K+YKL+D  G+ LLV   G+RYWRL+YR++GK+K LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LADSRARRDEARKLLANGIDPGDKKKNDKIEQ--EETRTFEQLAVEWHATNK-KWSEEHS  117
            LA++R +RD+ARK++++G DPG+KK+++K+ Q    T TF+ LA EWH  +   WSE  +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVELSGRLEVASRLQQRTTAIMRYAVQ  177
            R VL +L+ ++FP +GKR+++++   ++L  ++ +E  G LE   +++Q    I RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIESYTGRSLTRLAVELTLLVFI  237
            +G    NPA E+ +++A+++  H P L     P +L+++  Y G ++TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRFARWSEIDFETSIWTIPAEREAIEGVKHSQRGSKIRTPHLVPLSR  288
            R+ ELR A WSEIDF+ ++WTIP  R             K+R  H+VPLSR
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSR  279

554) XALc_1804 in NC_013722


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  221 bits (824),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 163/399 (41%), Positives = 251/399 (63%), Gaps = 12/399 (3%)

Query  1    MPLTDTAIRKTKLGVAPLKLRDGGGLYLLMRPDGARWWRWDYRRPNTGKRNTLSLGTYPD  60
            M+LT   +  ++      KL D  GLYLL++  GAR WR  YR   +GK + L+LG YPD
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR--IAGKEKKLALGVYPD  58

Query  61   TGladardkrdaarkllaaGVDPGEQRKRAKEQAAMVAPAGETFETVAREWMARQTVARV  120
             +LA+AR KRD ARK+++ G DPGE+++  KE+ +   +A +TF+++A EW  ++++++ 
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKR--KEKLTQKISATNTFHALATEWHQHKSLSW-  115

Query  121  TAEKNRWLLETF---LFPEIGSRPIGEITPRELLDALRKIEATGKLETAGRAKIKAGQVF  177
            +    R +LE++   +FP +G R++ +I P E+L+ LR+IE  G LE   + +    Q+F
Sbjct  116  SESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIF  175

Query  178  RYAMLEGKAEIDPTASLRGALKTVKARHHASITDPVKIGQLLRAIEGFIGQPVTHAALKL  237
            RYA+  G+A ++P++ L ++L + KA H + +     +  +LR +  + G PVT+ A +L
Sbjct  176  RYAIATGRATVNPASELTSTLAAPKAAHFPHLRAD-ELPVFLRKLAEYHGSPVTRMATNL  234

Query  238  APLVFVRPGELRAAEWGEIDLDAAMWRIRPERMKMKAAHLVPLSSQAVAILRDLHALTGG  297
              L  +R  ELR+AEW+EID+D A+W I   RMKM+  H+VPLS Q   IL++L +++G 
Sbjct  235  LLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQ  294

Query  298  GPHVFPGLRP-NRPMSENTINAALRGLGYASDEMTGHGFRSMAATRLNEMGWNPDAIERQ  356
               VFPG    N+PMSE +IN  L+ +GY +   TGHGFR   +T L+E G N+  IE Q
Sbjct  295  YRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQGFNSAWIEMQ  353

Query  357  LAHAETNKVREAYTHAAQYLPERIRMMQAWADYLDGLCA  395
            LAH + N +R +Y HA  Y+  R  MMQ  ADY+D+L  
Sbjct  354  LAHVDKNSIRGTYNHAL-YIDGRREMMQWYADYIDSLSE  391

555) BRPE64_ACDS06230 in NC_021287


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  219 bits (816),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 159/383 (42%), Positives = 262/383 (69%), Gaps = 10/383 (2%)

Query  2    PREKTYRLADSGGMYLELTPAGGKYWRMKYRFAGKEKRLALGVYPDVSlaaarkkrdear  61
            P+EK Y+L+D  G+YL +  +G++YWR+KYR+AGKEK+LALGVYPDVSLA AR KRD+AR
Sbjct  13   PKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVSLAEARIKRDDAR  72

Query  62   eklaQGLDPGETkkadkraallaaansfkavalaWMDERKALVEIGQYNKT-LARFDNDV  120
              +++G DPGE K+ +K +  ++A+N+F A+A  W +++K+L     Y ++ L  +D+D+
Sbjct  73   KIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESYARSVLEALDKDI  131

Query  121  FPWLGTRPITAIDAPELLAVLKRIDGRGARFTAHRVRSEISRVFRFGIKEGHCKTDPARD  180
            FP LG R++T I + E+L +L+RI+ RG+    ++VR   +++FR++I  G+   +PA +
Sbjct  132  FPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASE  191

Query  181  LVGAIPPAATTHFASITDPAKVGEMLRAFDAFSGTFPVQCALKLAPMLFVRPGELRQAEW  240
            L ++++++ ++HF+ +  +  +   LR +  + G+   + A +L  +  +R  ELR AEW
Sbjct  192  LTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEW  250

Query  241  TEFDLDKGEWRYLVSKTKTQ--HLVPLASQAVAILRALHALTGTGRFVFPGARSTQRPMS  298
            +E+D+D++ W    S+ K +  H+VPL+ Q   IL+ L +++G  R+VFPG    ++PMS
Sbjct  251  SEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMS  310

Query  299  EAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHVVPDNLGSAYN  358
            EA+IN  L+R+GYD R+  TGHGFR    TILHE+   ++  IE QLAHV  +++ ++YN
Sbjct  311  EASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYN  367

Query  359  RTKFIKERRAMMQTW-ADYLERV  380
            ++ +I  RR MMQ W ADY++ +
Sbjct  368  HALYIDGRREMMQ-WYADYIDSL  389

556) BTI_453 in NC_021173


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  218 bits (810),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 162/401 (41%), Positives = 269/401 (68%), Gaps = 12/401 (2%)

Query  1    MPLTDVAIRKAAPREKPYRLADSGGMYLEVSPAGGKYWRLKYRFLGKEKRLALGVYPDVS  60
            M+LT   +  A P+EK Y+L+D  G+YL V  +G++YWRLKYR+ GKEK+LALGVYPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   laaarekrddarkklaaGVDPSEakkadkraarlaaTNSFEAVALGWMDELKPYVTAGSM  120
            LA AR KRDDARK ++ G DP+E K+ +K + +++ATN+F+A+A  W ++ K+   + S 
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEW-HQHKSLSWSESY  119

Query  121  AKTK-ARFEKDVFPWIGKRPVAEIDAPEVLTVLKRIDSRGARFTAHKIRGEISRAFRYGI  179
            A++    ++KD+FP +GKR+V++I + E+L +L+RI+ RG+    +K+R   ++ FRY+I
Sbjct  120  ARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAI  179

Query  180  KEGYCKFDPARDLVSAIPPAQTTHFASITEPAKVGAMLRAFDGFSGTFPVLCALKLAPML  239
              G    +PA +L S++++++++HF+ +  +  +   LR +  + G+ PV   +    +L
Sbjct  180  ATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGS-PV-TRMATNLLL  236

Query  240  FT--RPGELRKAEWAQFNLDKGEWRYLVT--KTSTEHLVPLAAQAVQILRELHALTGHGR  295
            +T  R  ELR AEW+++++D++ W    +  K    H+VPL+ Q  +IL++L +++G+ R
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYR  296

Query  296  YVFPGARTAQRPMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQ  355
             VFPG    ++PMS+A++N  L+R+GYD R+  TGHGFR    TILHE+   ++  IE Q
Sbjct  297  LVFPGRCDINKPMSEASINMVLKRIGYDGRA--TGHGFRHTMSTILHEQ-GFNSAWIEMQ  353

Query  356  LAHAVPDTLGKAYNRTKFIKERKAMMQKWADYLERLKADSG  396
            LAH   +++  +YN++ +I  R+ MMQ  ADY++ L  + +
Sbjct  354  LAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

557) XCV2217 in NC_007508


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  217 bits (806),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 164/399 (42%), Positives = 256/399 (65%), Gaps = 15/399 (3%)

Query  1    MPLTDTAIRKTKPGAVPLKLRDGGGLYLLMRPDGARWWRWDYRRPVTGKRNTLSLGTYPD  60
            M+LT   +  ++P     KL D  GLYLL++  GAR WR  YR  ++GK + L+LG YPD
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYR--IAGKEKKLALGVYPD  58

Query  61   TGladarekrdaarkllaaGVDPGEQRKQAKQERAALVDAAGETFEVVAREWMARQTVAR  120
             +LA+AR KRD ARK+++ G DPGE++++ K  +     +A +TF+ +A EW  ++++++
Sbjct  59   VSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKI---SATNTFHALATEWHQHKSLSW  115

Query  121  VTAEKNRWLLETF---LFPEIGSRPIGEITPRELLDALRKIEATGKLETAARAKIKAGQV  177
             +    R +LE++   +FP +G R++ +I P E+L+ LR+IE  G LE   + +    Q+
Sbjct  116  -SESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQI  174

Query  178  FRYAMLEGKAEIDPTaslrgalkaakarhhaaVTEPAKIGQLLRAIEGFSGQPVTHAALK  237
            FRYA+  G+A ++P++ L ++L A+KA H + +  +  +  +LR +  + G PVT+ A +
Sbjct  175  FRYAIATGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATN  233

Query  238  LAPLVFVRPGELRAAEWAEIDLDAAMWRIRPERMKMKAAHLVPLSSQAVAILRDLHALTG  297
            L  L  +R  ELR+AEW+EID+D A+W I   RMKM+  H+VPLS Q   IL++L +++G
Sbjct  234  LLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSG  293

Query  298  GGHHVFPGLRP-NRPMSENTVNAALRALGYSGDEMTGHGFRSMAATRLNELGWNADAVER  356
              + VFPG    N+PMSE ++N  L+ +GY G   TGHGFR   +T L+E G N+  +E 
Sbjct  294  QYRLVFPGRCDINKPMSEASINMVLKRIGYDGRA-TGHGFRHTMSTILHEQGFNSAWIEM  352

Query  357  QLAHAETNKVREAYTHAAQYLHERVRMMQAW-ADYLDGL  394
            QLAH + N +R +Y HA  Y++ R  MMQ W ADY+D+L
Sbjct  353  QLAHVDKNSIRGTYNHAL-YIDGRREMMQ-WYADYIDSL  389

558) PFL_4977 in NC_004129


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  214 bits (797),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 160/396 (41%), Positives = 233/396 (59%), Gaps = 10/396 (2%)

Query  10   PLADTTLTGLEPEAKEYRELDGNGLYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEVS  69
            +L+   +    P  K+Y+  D  GLY+ VK  G++ W+L+Y R AG+   ++LG YP+VS
Sbjct  2    ALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKY-RIAGKEKKLALGVYPDVS  60

Query  70   GALAREKAAELRKTISSGIDPLEQKRSAKAAIDAAKTRTFRAAADAWLKAKE---EKGLA  126
             A AR K  + RK IS G DP E+KR  K +   + T TF+A A  W + K      + A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  127  PSTLNKIRTYLDKDILPALGDKPLDEITRTDCAELQASIEARDAHNVAEKCRTWINQIFG  186
             S L+     LDKDI+P LG +++ +I   +  E+   IE R++ +   K R   NQIF 
Sbjct  121  RSVLEA----LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFR  176

Query  187  RAIGLGLTENDPGSRLRDIAAQAPKTQQHPHLLEPELGEFLTALKNTPSRLTARTAAWLC  246
             AI+ G +  +P+S L    A APK+ + PHL   EL  FL  L +  +   +R A+ L 
Sbjct  177  YAIATGRATVNPASELTSTLA-APKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLL  235

Query  247  IWTASRPGMVRLAEWKEFDLDKATWTTPAAKMKMRRDFVCPLPHQAIAALKELHCLTGRS  306
            + T+ R   +R AEW E+D+D+A WT P ++MKMRR  V PL++Q    L++L  ++G+ 
Sbjct  236  LLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQY  295

Query  307  RWLFPGVGAKNPTISENTINKVFATIGYKGRLVGHGTRHTASTLLREHGWPKEHVEAQLA  366
            R +FPG    N  +SE +IN V+  IGY GR  GHG RHT ST+L+E+G     +E QLA
Sbjct  296  RLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLA  355

Query  367  HKE-EGISGVYNKAQYLEQRITMMQWYADHLDALEQ  401
            H + ++I G YN A Y++ R  MMQWYAD +D+L +
Sbjct  356  HVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSE  391

559) SBOV27691 in NC_022241


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  214 bits (795),  Expect = 7e-57, Method: Compositional matrix adjust.
 Identities = 134/334 (41%), Positives = 212/334 (64%), Gaps = 0/334 (0%)

Query  2    MGLGAFPALSLADARGLRADYLALLANGIDPQIQTEVAEEQQQIALDSIFSTVAANWFQL  61
            ++LG +P +SLA+AR  R D   ++++G DP  +       Q+I+  + F ++A++W Q 
Sbjct  51   LALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQH  110

Query  62   KSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQR  121
            KS S +  YA+ +  +L+KD+FP +G  +V +I +  ++E L  I  RG+LE +R++ Q 
Sbjct  111  KSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQY  170

Query  122  INEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVSTRC  181
             N+I  YA+ TG    NPAS +  ++  PK  + P LR++ELP ++R L   + S  TR 
Sbjct  171  CNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRM  230

Query  182  LIEWQLLTLVRPSEASGARWAEIDLDAKLWTIPAERMKAKREHIVPLSTQALEILEVMKP  241
              +  LLT +R  E  +A W+EID+D  LWTIP  RMK +R H+VPLS Q  +IL+ +K 
Sbjct  231  ATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKT  290

Query  242  ISAHREHVFPSRNDPKQSMNSQTANAALKRIGYGGKLVAHGLRSIASTTLNEAGFNADVI  301
            +S++   VFP+R D +++M+  + N  LKRIGY+G+  +HG+R   ST L+E GFN+  I
Sbjct  291  FSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWI  350

Query  302  EAALAHTDKNEVRRAYNRSIYLKQRIGMMEWWGE  335
            E  LAH DKN +R +YN+++Y+  R  MM+W ++
Sbjct  351  EMQLAHVDKNSIRGTYNHALYIDGRREMMQWYAD  384

560) MCA0676 in NC_002977


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  209 bits (778),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 144/302 (48%), Positives = 210/302 (70%), Gaps = 3/302 (0%)

Query  1    MALTDTAVRSARPAEKAFKLADEKGLFLHVMPGGARYWRLKYRIGGKEKLMALGVYPEVS  60
            MALT   V +ARP EK +KL+DE+GL+L V   GARYWRLKYRI+GKEK +ALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKEararrdkaraLLGQGIDPNDHKKAAKRTE--AGEDSFERIALEWHARHMANKSESHA  118
            L EAR +RD AR ++++G DP + K+  K T+  ++ ++F+ +A EWH +   + SES A
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  TKTLERLRKDVFPWIGNRPVREITAPELLSVLRRIESRGAIELCHVTKRICGQVMRYAIA  178
               LE L KD+FP +G+R+V +I + E+L +LRRIE RG++E  +  ++ C Q+ RYAIA
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  TGRAERDPAADLKGALQPVKARHFAAITDPKAIGELLRAIEEYTGHFATQCALKLSPLVM  238
            TGRA  +PA++L ++L + KA HF+ +  +  +  +LR + EY G   T+ A +L  L  
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLR-ADELPVFLRKLAEYHGSPVTRMATNLLLLTG  239

Query  239  LRPGEVRQaewaeidieaaewRIPAAKMKMRDEHIVPLSRQAVEILESIRPLTGRGRYAS  298
            LR  E+R AEW+EID++ A W IP ++MKMR  H+VPLSRQ  +IL+ ++ ++G+ R   
Sbjct  240  LRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVF  299

Query  299  PG  300
            PG
Sbjct  300  PG  301

561) ybl123 in NC_012892


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  208 bits (774),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 125/299 (42%), Positives = 189/299 (64%), Gaps = 15/299 (5%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMLMLVHPNSSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALT  ++ +A+P +K YKL+D  G+ +LV   ++RYWRL+YRI GKEK LALGVYP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LSEARAKRDEARKLISAGIDPCEQKRAKKVVPDLQLS--FEHIARRWHASNK-QWTQSHS  117
            L+EAR KRD+ARK+IS G DP E+KR  K+   +  +  F+ +A  WH  +   W++S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  118  DKVLKSLETHVFPFIGNRDITKLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
              VL +L+ ++FP++G+R +T +   ++L  +R  E +   E   +++Q  + + RYA+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTRLAVMLNLLVFI  237
            +G    NPA +++++L++ K  H P L    LP +L +++ Y G PVTR+A  L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  238  RSSELRYARWSEIDIENAMWTIPAEREPLPGVNFSHRGSKMRTPHLVPLSKQAVPSLPP  296
            R+ ELR A WSEID++NA+WTIP  R             KMR  H+VPLS+Q    L  
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQ  287

562) PFLU1878 in NC_012660


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  208 bits (775),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 173/412 (42%), Positives = 264/412 (65%), Gaps = 20/412 (4%)

Query  1    MALTDTAIKQAKPASKPYTLTDGDGLSLQVPTTGSKRWHFRFYWHDKQLRISLGTYPDVS  60
            MALT   +  A+P  K Y L+D  GL L V TTG++ W++++   +K+ +++LG YPDVS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LKearrrreaaraLVASNIDPRSHRRAERQKASRAVKNTFEAVADRWHEFRSKKLTkskk  120
            L EAR +R+ AR +++   DP   +R E+     +  NTF+A+A  WH+ +S   + S  
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  121  gsagqaskYLKKDMLPCLGDLPIADISRGDVLELIRRIERRGALVSARKVRTWLNQIFRF  180
             S  +A   L KD++P LG  +++DI   ++LE++RRIE+RG+L   RKVR   NQIFR+
Sbjct  121  RSVLEA---LDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRY  177

Query  181  AMAEGLIDVNPAADLDIVAETPRPVRHNPFLQVNELPGLLRTVTHYEGAEKtrlgirlll  240
            A+A G   VNPA++L     +P++  H P L+ +ELP +LR +++Y+G+  TR++  LLL
Sbjct  178  AIATGRATVNPASELTSTLAAPKAA-HFPHLRADELPVFLRKLAEYHGSPVTRMATNLLL  236

Query  241  ltgvrtgelrAATPDQFDFDKGIWRVPPEGVKQLRNRVRTQGNEIPPYVIPLSTQAIAIV  300
            LTG+RT ELR+A   ++DFD+++W +P   +K  R++V           +PLS Q   I+
Sbjct  237  LTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHV-----------VPLSRQVTDIL  285

Query  301  QRLMQLRTRGARYLLVH--RYEPQEMISENTLNTAISRMGYKGRLTGHGIRATISTALNE  358
            Q   QL+T +++Y LV   R + +  +SE ++N  + R+GY GR TGHG+R T+ST L+E
Sbjct  286  Q---QLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHE  342

Query  359  VGFVEEWIEAQLSHADSNQIRAAYNHAEYVEPRRRMMQYWADLLDALEVGVP  410
             GF   WIE QL+H D N IR++YNHA Y++ RR MMQ  AD +D+L   V+
Sbjct  343  QGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQWYADYIDSLSEQVS  394

563) XALc_1632 in NC_013722


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  206 bits (767),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 154/369 (42%), Positives = 236/369 (64%), Gaps = 14/369 (3%)

Query  1    MRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGEQRKR  60
            ++  GAR WR  YR   +GK + L+LG YPD +LA+AR KRD ARK+++ G DPGE+++ 
Sbjct  30   VKTTGARYWRLKYR--IAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKR-  86

Query  61   AKEQAAMVAPAGETFETVARAWMARQTVARVTAEKNRWLLETF---LFPEIGSRPIGEIT  117
             KE+ +   +A +TF+++A  W  ++++++ +    R +LE++   +FP +G R++ +I 
Sbjct  87   -KEKLTQKISATNTFHALATEWHQHKSLSW-SESYARSVLEALDKDIFPYLGKRSVTDIL  144

Query  118  PRELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALKTVKARHH  177
            P E+L+ LR+IE  G LE   + +    Q+FRYA+  G+A ++P++ L ++L + KA H 
Sbjct  145  PLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHF  204

Query  178  AAVTDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLDAAMWRIR  237
            + +     +  +LR +  + G PVT+ A +L  L  +R  ELR+AEW+EID+D A+W I 
Sbjct  205  PHLRAD-ELPVFLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIP  263

Query  238  PERMKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLRP-NRPMSENTINSALRALGY  296
              RMKM+  H+VPLS Q   IL++L +++G    VFPG    N+PMSE +IN  L+ +GY
Sbjct  264  ESRMKMRRKHVVPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGY  323

Query  297  SGDEMTGHGFRSMAATRLNEMGWNADAIERQLAHAETNKVREAYTHAAQYLPERVRMMQA  356
             G   TGHGFR   +T L+E G N+  IE QLAH + N +R +Y HA  Y+  R  MMQ 
Sbjct  324  DGRA-TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAL-YIDGRREMMQ-  380

Query  357  W-ADYLDSL  364
            W ADY+DSL
Sbjct  381  WYADYIDSL  389

564) ETA_03770 in NC_010694


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 141/347 (41%), Positives = 227/347 (66%), Gaps = 16/347 (4%)

Query  1    MALSDVKVRSAKPEVKACKLTDGDGMVLLAHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K  KL+D  G+ LL    G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAFKVEQEQEAI-TFEMVARDWQASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +W+  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFAAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F+ +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELSRIPELLHRIDHYSGRPltrlaleltllVFI  238
            +G    NPA E+++++A++K  H + L    +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELCFARWSEVDFETAMWTIPGEREPSEGVKHSQRGSKMRTPHLVPLSRQALGILEKI  298
            R+ EL  A WSE+DF+ A+WTIP  R             KMR  H+VPLSRQ  +IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFR  345
            K+ SG+  L+F G  D  KPMSE ++N  L+ +GYD +    GHGFR
Sbjct  289  KTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT--GHGFR  333

565) MICA_2176 in NC_016026


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  202 bits (752),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 130/302 (44%), Positives = 203/302 (68%), Gaps = 7/302 (2%)

Query  14   NAQNTFKAVALEWHERQLDRWSENHALNVMRRFDIDIFPYIGSRPIADIDAPELLEVLRR  73
            +A NTF A+A EWH+++   WSE+ A +V+  +D DIFPY+G R+++DI + E+LE+LRR
Sbjct  95   SATNTFHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRR  154

Query  74   IEKRGSLDVAARVKQICGQVFRYGIATGRCKRDHAADLRGALKTAKTQHYPALDIKEMPE  133
            IEKRGSL+   +V+Q C Q+FRY+IATGR   + A++L ++L ++K+ H+P L   E+P 
Sbjct  155  IEKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAAPKAAHFPHLRADELPV  214

Query  134  FLKALERNEPRLFSRTRKGIRLLMLTFVRTSELIKATWDEFDLEEGRWVIPAERMKVGGA  193
            FL+ L   +    + TR +  LL+LT +RT EL  A W E+D++++ W IP  RMK+   
Sbjct  215  FLRKLAEYHGS--PVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRK  272

Query  194  HTVPLSRQAikilkelkeeTEHLNVKWVFPSQVRPKEHMSNNTLLFAIGRLGYKGRMTGH  253
            H VPLSRQ   IL++LK  + +  +  VFP++   +  MS+ ++   + R+GY GR TGH
Sbjct  273  HVVPLSRQVTDILQQLKTFSGQYRL--VFPGRCDINKPMSEASINMVLKRIGYDGRATGH  330

Query  254  GFRALAMSTIKENLGYRHEIVDRQLAHAHKSKIDRAYDRSKFLPDRIVMMQEW-ADYLDS  312
            GFR  +MSTI ++ G+    ++ QLAH +K+ I  +Y+++ ++ +R  MMQ W ADY+DS
Sbjct  331  GFRH-TMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYIDS  388

Query  313  VE  314
            + 
Sbjct  389  LS  390

566) UMNK88_5213 in NC_017641


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  202 bits (751),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 125/306 (41%), Positives = 204/306 (67%), Gaps = 14/306 (4%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+  +V +A+P  K YKL+D  G+ LLV   G++YWRL+YR++GKEK LALG YP+VS
Sbjct  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQEAI-TFEVVARDWHASNQ-KWSASHS  118
            LA+AR +RD+ARK++++G DP+E+K+  K+ Q   A  TF+ +A +WH  +   WS S +
Sbjct  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              VL +L+ ++F  +GKR+++++   ++L  ++ +E  G LE   +++Q    I R+A+ 
Sbjct  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G    NPA E+++++A++K  H + L  + +P +L+++ +Y G P+TR+A +L LL  +
Sbjct  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTRMATNLLLLTGL  240

Query  239  RSSELHFARWSEVDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ EL+ A WSE+DF+ A+WTIP  R             KMR  H+VPLSRQ   IL+++
Sbjct  241  RTIELRSAEWSEIDFDNALWTIPESR------------MKMRRKHVVPLSRQVTDILQQL  288

Query  299  KSMSGN  304
            K+ SG+
Sbjct  289  KTFSGQ  294

567) GbCGDNIH1_1802 in NC_008343


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  188 bits (696),  Expect = 5e-49, Method: Compositional matrix adjust.
 Identities = 145/362 (41%), Positives = 232/362 (65%), Gaps = 24/362 (6%)

Query  1    MKYRYGGKEKLLSFGAYPGVSLAEarlrrakakvvlGEGGDPGA-------GNKPRTQMT  53
            +KYR +GKEK L++G YP+VSLAEAR++R  A+ +++EGGDPG         +K  +  T
Sbjct  40   LKYRIAGKEKKLALGVYPDVSLAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNT  99

Query  54   FEEAARKWHGHRLDALDAGHATRLLTRLERDAFPVLGKLGLSVITPTDVLAMVRRVEARG  113
            F+  A  WH H+  +   + A  +L  L++D FP LGK +++ I P ++L ++RR+E RG
Sbjct  100  FHALATEWHQHKSLSWSESYARSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRG  159

Query  114  ALDVSRRLKQHVSQIYRFAIAHGWAERDPAEHLGQLLKPKPRTRHMPRIGRSELPALIRA  173
            +L+  R+++Q  +QI+R+AIA G+A  +PA +L   L + P++ H P++   ELP ++R 
Sbjct  160  SLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTL-AAPKAAHFPHLRADELPVFLRK  218

Query  174  IDGYDGEETPRRRAVTRAALLFTLLTWVRTNETRHARWEEFEDLDGASPVWRVPAERMKM  233
            +  Y+G       +VTR A  + LLT +RT E R A W E   +D  +++W +P  RMKM
Sbjct  219  LAEYHGS------PVTRMATNLLLLTGLRTIELRSAEWSE---IDFDNALWTIPESRMKM  269

Query  234  VREHvvplapavvallQEVRVYSLADY--VFVGE-KPDQPISQNTMIYACYRMGYRGRQT  290
             R HVVPL+  V  +LQ+++ +S ++Y  VF G    ++P+S+ ++     R+GY GR T
Sbjct  270  RRKHVVPLSRQVTDILQQLKTFS-GQYRLVFPGRCDINKPMSEASINMVLKRIGYDGRAT  328

Query  291  VHGFRGLASTWANEAECYQPDWIEMALAHVERDEVRGAYNAALYLSPRRRMLEDW-AGFI  349
             HGFR   ST   + + +++ WIEM LAHV+++ +RG+YN ALY+  RR M++ W A++I
Sbjct  329  GHGFRHTMST-ILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WYADYI  386

Query  350  QS  351
            +S
Sbjct  387  DS  388

568) PSJM300_10880 in NC_018177


> JQ994271|1|G1|422941503|AFX83955.1|Escherichia_coli_ED_32|+|144..1328|-|-|integrase
Length=394

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 128/309 (42%), Positives = 198/309 (65%), Gaps = 17/309 (5%)

Query  2    TFRQVANEWDTFRTPRLTQGRKGSAAQARRYLDKDIIPLLGDMPIEAVRRTDVLKVVQTV  61
            TF+ +A EW+  ++   +++   S  +A   LDKDI+P LG  ++  +   ++L +++ +
Sbjct  99   TFHALATEWHQHKSLSWSESYARSVLEA---LDKDIFPYLGKRSVTDILPLEMLEILRRI  155

Query  62   EERGALNVAEKIRTWLHQIFRYAMVHEYVEVNPATDLDIVAAEQPPVKHNPWLRLGELGE  121
            E RG+L+   K+R   +QIFRYA+      VNPA++L    A  P   H P LR +EL  
Sbjct  156  EKRGSLEKLRKVRQYCNQIFRYAIATGRATVNPASELTSTLAA-PKAAHFPHLRADELPV  214

Query  122  FVRTLRAYHGSllvrlgvelmllTGVRTAEIRHARHDQFDLDKRLWSIPASEVKQLRKLV  181
            F+R L  YHGS + R++ +L+LLTG+RT E+R A   ++D+D+ LW+IP S +K  RK V
Sbjct  215  FLRKLAEYHGSPVTRMATNLLLLTGLRTIELRSAEWSEIDFDNALWTIPESRMKMRRKHV  274

Query  182  RLKGSEVPDYLVPLSSQAVEVIRAIQVFTRQYELLIPGRNDPAKVLSENTLNTAIKRMGY  241
                       VPLS Q  ++++ ++ F+ QY L++PGR D  K +SE ++N  +KR+GY
Sbjct  275  -----------VPLSRQVTDILQQLKTFSGQYRLVFPGRCDINKPMSEASINMVLKRIGY  323

Query  242  ANRLTGHGIRATLSTALYEMGYPSPWVEAQISHADENKVRDAYNHALYVEQRRDMMQVW-  300
              R TGHG+R T+ST L E G+ S+W+E Q++H D N +R++YNHALY++ RR+MMQ W 
Sbjct  324  DGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHALYIDGRREMMQ-WY  382

Query  301  ADYLDFLAA  309
            ADY+D L+ 
Sbjct  383  ADYIDSLSE  391