Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
cag pathogenicity island protein Y |
NC_014256 (Helicobacter pylori B8) |
0.0 |
91 |
|
hypothetical protein |
NC_021217 (Helicobacter pylori UM037) |
0.0 |
91 |
|
conjugation TrbI family protein |
NC_017354 (Helicobacter pylori 52) |
0.0 |
88 |
|
cag pathogenicity island protein (cag7) |
NC_017376 (Helicobacter pylori Santal49) |
0.0 |
91 |
|
cag pathogenicity island protein (cag7) |
NC_017372 (Helicobacter pylori India7) |
0.0 |
89 |
|
cag pathogenicity island protein (cag7) |
NC_000915 (Helicobacter pylori 26695) |
0.0 |
92 |
|
cag pathogenicity island protein (cag7) |
NC_018939 (Helicobacter pylori 26695) |
0.0 |
92 |
|
cag pathogenicity island protein (cag7) |
NC_018937 (Helicobacter pylori Rif1) |
0.0 |
92 |
|
cag pathogenicity island protein (cag7) |
NC_018938 (Helicobacter pylori Rif2) |
0.0 |
92 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_017367 (Helicobacter pylori F57) |
0.0 |
90 |
|
hypothetical protein |
NC_021218 (Helicobacter pylori UM066) |
0.0 |
91 |
|
cag pathogenicity island protein |
NC_017365 (Helicobacter pylori F30) |
0.0 |
90 |
|
cag island protein |
NC_017368 (Helicobacter pylori F16) |
0.0 |
82 |
|
cag pathogenicity island protein |
NC_017360 (Helicobacter pylori 35A) |
0.0 |
90 |
|
cag pathogenicity island protein (cag7, cagY) |
NC_017362 (Helicobacter pylori Lithuania75) |
0.0 |
91 |
|
cag island protein |
NC_014560 (Helicobacter pylori SJM180) |
0.0 |
78 |
|
cag pathogenicity island protein CagY |
NC_010698 (Helicobacter pylori Shi470) |
0.0 |
85 |
|
cag pathogenicity island protein (cag7) |
NC_017740 (Helicobacter pylori Shi169) |
0.0 |
83 |
|
cag pathogenicity island protein (cag7) |
NC_017378 (Helicobacter pylori Puno120) |
0.0 |
87 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_017742 (Helicobacter pylori PeCan18) |
0.0 |
87 |
|
cag pathogenicity island protein (cagY, cag7) |
NC_017359 (Helicobacter pylori Sat464) |
0.0 |
84 |
|
cag pathogenicity island protein |
NC_017355 (Helicobacter pylori v225d) |
0.0 |
86 |
|
cag pathogenicity island protein (cag7) |
NC_017063 (Helicobacter pylori ELS37) |
0.0 |
81 |
|
cag pathogenicity island protein |
NC_020509 (Helicobacter pylori OK310) |
0.0 |
86 |
|
cag pathogenicity island protein CagY |
NC_017739 (Helicobacter pylori Shi417) |
0.0 |
82 |
|
cag pathogenicity island protein Y VirB10-like protein |
NC_017371 (Helicobacter pylori Gambia94/24) |
0.0 |
75 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='JQ685135' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc
4) HPSNT_02715 in NC_017376
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1487 bits (5645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1280/1414 (91%), Positives = 1338/1414 (95%), Gaps = 19/1414 (1%)
Query 396 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 453
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 454 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 504
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 505 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 564
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 565 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakneaekkeceklltpe 624
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAK EAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 625 akkkleeakksvkaYLDCVSQARTEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADK 684
A+KKLEEAKKSVKAYLDCVSQA+ E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKT+ ++
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 685 KRCVKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKESV 743
K+CVKDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AKESV
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 744 KAYKDCVSRARNekekkecekLLTPearklleeeakeSVKAYLDCVSQakteaekkecek 803
KAY DCVS+A+ E EKKECEKLLTPEARK LEE K SVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 804 lltpeakkkleeakksakaylDCVSQakteaekkeceklltPEARKLLEQQALDCLKNAK 863
LLTPEAKKKLEEAKKS KAYLDCVSQAK E EKKECEKLLTPEA+KLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 864 TEAEKKRCVKDLPKDLQKKVLAKESLKAYKDCVSRARNekekkeceklltpeakklleea 923
TEA+KKRCVKDLPKDLQKKVLAKES+KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 924 kksvkaYLDCVSQakteaekkeceklltPEARKLLEEAKESLKAYKDCVSRARNekekke 983
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLEEAKESLKAYKDCVSRARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 984 cekLLTPEAKKLLEQQALDCLKNAKTDAEKKRCAKDLPKDLQKKVLAKESVKAYLDCVSR 1043
CEKLLTPEAKKLLEQQALDCLKNAKT+A+KKRC KDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1044 ARNEKERKACeklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1103
ARNEKE+K CEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1104 EQEVKNSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLSCLEKAKNEEERKACL 1163
EQEVK+SVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1164 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKNSVKAYL 1223
KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVK+SVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1224 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1283
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1284 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTE 1343
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1344 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1403
RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1404 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1463
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1464 nleaklakalggnkkdddkekskkstaeakaesNKIDKDVAETAKNISEIALKNKKEKSG 1523
NLEAKLAKALGGNKKDDDKEKSKKSTAEAK ESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1524 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1583
EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1584 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1643
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1644 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1703
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1704 PEFNYALGQAINGSMQSSAHMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1763
PEFNYALGQAINGSMQSSA+MSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1764 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1797
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 581 bits (2193), Expect = 1e-166, Method: Compositional matrix adjust.
Identities = 495/568 (88%), Positives = 528/568 (93%), Gaps = 8/568 (1%)
Query 9 ETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDNPTETKTNFDEYESEETQT 68
ETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SD LDNPTETKTNFD SEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDSGGNETSESSHGSLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqennGYQ 128
QMDSGG+ETSESS+GSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 129 EETQIDLIDDETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDNPTETKTNF 188
EETQ +LIDDETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SD LDNPTETKTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 189 DEYKSEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFMPLEDKSSRFS 248
DE KSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 249 KDRNLYVNDEIKIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEI+IRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 309 KAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 368
+AFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 429 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADM 488
KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 489 SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTDEERKKC 541
SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 542 LKDLPKDLQSDI-LAKESLKAYKDCVSQ 568
K L + + + AK S+KAY DCVSQ
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 218 bits (811), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 257/519 (50%), Positives = 347/519 (67%), Gaps = 62/519 (11%)
Query 301 EIEDKNPLKAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 355
E E K+++KA+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 356 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 415
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + K+ +
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAK-KLLEQQ 1045
Query 416 GLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 465
+L DC+KNAKTEA+K+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1046 AL--------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 466 --------------DEERN------ECLKNIPQDLQ------------KELLADM--SVK 491
+E ++ +C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 492 AYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 551
AYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 552 DILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakne 611
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+NE
Sbjct 1218 KVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 612 aekke-ceklltpeakkkleeakksvkaYLDCVSQARTEAEKKECEKLLTPEAKKLLEQQ 670
E++ L K +E KKSVKAYLDCVSQA+TEAEKKECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 671 ALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltP 730
L+CL +A E ++K C+K+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLTP
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTP 1396
Query 731 EARKLLE-EAKESVKAYKDCVSRARNekekkecekLLTP 768
EARKLLE E K SVKAY DCVSRARNEKEKKECEKLLTP
Sbjct 1397 EARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTP 1435
Score = 178 bits (659), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 172/196 (88%), Positives = 185/196 (95%), Gaps = 0/196 (0%)
Query 1 MNEENDKLETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDNPTETKTNFDE 60
MNEENDKLETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SDHHL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YESEETQTQMDSGGNETSESSHGSLADKLFKKARKLVDNKKPFTQQKnldeetqelneed 120
SEETQTQMDSGG+ETSESS+GSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqennGYQEETQIDLIDDETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDN 180
DQENNGYQEETQ +LIDDETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETKTNFDEYKSEEI 196
PTETKTNFD KSEE
Sbjct 181 PTETKTNFDGDKSEET 196
Score = 162 bits (600), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 163/188 (87%), Positives = 175/188 (94%), Gaps = 0/188 (0%)
Query 9 ETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDNPTETKTNFDEYESEETQT 68
ETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SD LDNPTETKTNFD SEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDSGGNETSESSHGSLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqennGYQ 128
QMDSGG+ETSESS+GSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQIDLIDDETSQKTQQHSPQDLSNEEATEVNRFedsskeseensdHHLDNPTETKTNF 188
EETQ +LIDDETS+KTQQHSPQDLSNEEATE+N+FEDSSKES E+SD LDNPTETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DEYKSEEI 196
D KSEE
Sbjct 319 DGDKSEET 326
Score = 103 bits (374), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 115/290 (40%), Positives = 179/290 (62%), Gaps = 32/290 (11%)
Query 300 AEIEDKNPLKAFYECISNG---GNYEEClklikdkklqdqmkktlE---AYNDCIKNAKT 353
++I K+++KA+ +C+S++ ++ EC KL+ + + E AY DC+ +AKT
Sbjct 742 SDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKT 801
Query 354 EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRK 413
E E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE R K+
Sbjct 802 EAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAR-KLLE 859
Query 414 ELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----DCLKNAKTDEE 468
+ +L DC+KNAKT+ E++ C+K+L+K+ + L ++++ DC+ +AK + E
Sbjct 860 QHAL--------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAE 911
Query 469 RNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV 525
++EC K + + K LL + SVKAY DCVS+A+ E EKKECEKLLTPEA+KKLE+
Sbjct 912 KKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 526 ------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVSQ 568
LDC+ +AK ++E+K C K L P + AK S+KAY DCVSQ
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQ 1020
Score = 45.0 bits (151), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 70/115 (61%), Gaps = 14/115 (12%)
Query 343 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 399
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 400 KLIND--PEIREKF----RKELGLQKELQEYKDCIKNAKTEAEK---NECLKGLS 445
+L +D EI++K +++L+ L++ +C+ N +++ ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
6) C694_02720 in NC_018939
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1461 bits (5547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1291/1414 (92%), Positives = 1342/1414 (95%), Gaps = 19/1414 (1%)
Query 526 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 583
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 584 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNEK 634
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 635 EKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 695 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 755 akkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQQALDCLKNAKTDKER 814
A+KKLEEAKKSVKAYLDCVS+A+NE EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTD ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 815 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKKSV 873
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AK SV
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 874 KAYLDCVSQakteaekkeceklltPearklleexakeSVKAYLDCVSQakneaekkecek 933
KAYLDCVSQAKTEAEKKECEKLLTPEARK LEE K SVKAYLDCVSQAKNE EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 934 lltleskkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 993
LLT E+KKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 994 TEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleea 1053
TEADKKRCVKDLPKDLQKKVLAKES+KAYKDCVS+ARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1054 kksvkaYLDCVSQakteaekkeceklltPEARKLLEEAKESVKAYKDCVSKARNekekke 1113
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLEEAKES+KAYKDCVS+ARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 1114 cekLLTPEAKKLLEQQVLDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1173
CEKLLTPEAKKLLEQQ LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1174 ARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1233
ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1234 EQEVKKSIKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1293
EQEVKKS+KAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1294 KNLPKDLQENILAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1353
KNLPKDLQEN+LAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1354 DCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1413
DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1414 SDEEKLKYLQEAREKAVADCLAMAKTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTE 1473
SDEEKLKYLQEAREKAV DCL A+TDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1474 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1533
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1534 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDIAKQYETEKTIkdk 1593
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDI+KQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1594 nleaklakalggnkkdddkekskkstaeakaennkIDKDVAETAKNISEIALKNKKEKSG 1653
NLEAKLAKALGGNKKDDDKEKSKKSTAEAK E+NKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1654 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1713
EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1714 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1773
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1774 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1833
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1834 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1893
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1894 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1927
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 628 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 649/698 (93%), Gaps = 8/698 (1%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDGDKSEETQT 68
ETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSD LDNPTET+T+FDGDKSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqenneyq 128
QMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 eetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTNF 188
EETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDNPTET+TNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelne 248
DGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 249 eddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHL 308
EDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 309 DNPTETQTNFDGDKSEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFM 368
DNPTET+TNFD DKSEEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 369 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 428
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 429 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 488
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 489 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelq 548
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 549 kelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQ 608
KELQEYKDCIKNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 609 DLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQV-------LDCLKN 661
DLQ ++LA SVKAYKDCVS+A+NE EK+ECEKLLTPEA+K LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 662 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQ 698
AKT+ E+K C K L + + + AK S+KAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 244 bits (912), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 292/326 (90%), Positives = 308/326 (95%), Gaps = 0/326 (0%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDG 60
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSDHHL+NPTET+T+FDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 DKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneed 120
DKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDN 180
DQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETQTNFDGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnld 240
PTET+TNFDGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 241 eetqelneeddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKES 300
EETQELNEEDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 301 KESSDHHLDNPTETQTNFDGDKSEEI 326
KESSD LDNPTET+TNFDGDKSEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 195 bits (725), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 234/504 (47%), Positives = 325/504 (65%), Gaps = 64/504 (12%)
Query 431 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 485
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 486 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkel 545
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + + ++
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAKKLLEQQA 1046
Query 546 elqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER-LKQQAL----DCLKNAKTDEERN 600
DC+KNAKTEA+K++C+K+L+K+ + L ++++ DC+ A+ + E++
Sbjct 1047 L---------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 601 ECLKNIPQDLQKELLAD--MSVKAYKDCVSKARNEKEKQECEKLLTPEARKKL------- 651
EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLTPEA+K L
Sbjct 1098 ECEKLLTPE-AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESL 1156
Query 652 -------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQ 680
EQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1157 KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQ 1216
Query 681 SDILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakt 740
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+
Sbjct 1217 KKVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARN 1275
Query 741 eaekke-ceklltpeakkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQ 799
E E++ L K +E KKSVKAYLDCVS+A+ E EKKECEKLLTPEA+K+L +
Sbjct 1276 EEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAK 1335
Query 800 QALDCLKNAKTDKERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkecekllt 859
Q L+CL +A + ERK CLK+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLT
Sbjct 1336 QVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLT 1395
Query 860 PEARKLLE-EAKKSVKAYLDCVSQ 882
PEARKLLE E KKSVKAYLDCVS+
Sbjct 1396 PEARKLLEQEVKKSVKAYLDCVSR 1419
Score = 117 bits (426), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/241 (43%), Positives = 152/241 (64%), Gaps = 26/241 (10%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 532
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 533 NDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKE-AIERLKQQAL---- 587
PE R + ++ DC+KNAKT+ E++KC+K+L+K+ + L ++++
Sbjct 851 T-PEARKLLEQHAL---------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 588 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNEKEKQECEKLLT 644
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 645 PEARKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 697
PEARKKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 698 Q 698
Q
Sbjct 1020 Q 1020
Score = 40.3 bits (133), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 5/65 (7%)
Query 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 530 KLIND 534
+L +D
Sbjct 1509 NLYSD 1513 |
7) HP0527 in NC_000915
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1461 bits (5547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1291/1414 (92%), Positives = 1342/1414 (95%), Gaps = 19/1414 (1%)
Query 526 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 583
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 584 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNEK 634
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 635 EKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 695 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 755 akkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQQALDCLKNAKTDKER 814
A+KKLEEAKKSVKAYLDCVS+A+NE EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTD ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 815 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKKSV 873
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AK SV
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 874 KAYLDCVSQakteaekkeceklltPearklleexakeSVKAYLDCVSQakneaekkecek 933
KAYLDCVSQAKTEAEKKECEKLLTPEARK LEE K SVKAYLDCVSQAKNE EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 934 lltleskkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 993
LLT E+KKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 994 TEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleea 1053
TEADKKRCVKDLPKDLQKKVLAKES+KAYKDCVS+ARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1054 kksvkaYLDCVSQakteaekkeceklltPEARKLLEEAKESVKAYKDCVSKARNekekke 1113
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLEEAKES+KAYKDCVS+ARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 1114 cekLLTPEAKKLLEQQVLDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1173
CEKLLTPEAKKLLEQQ LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1174 ARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1233
ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1234 EQEVKKSIKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1293
EQEVKKS+KAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1294 KNLPKDLQENILAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1353
KNLPKDLQEN+LAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1354 DCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1413
DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1414 SDEEKLKYLQEAREKAVADCLAMAKTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTE 1473
SDEEKLKYLQEAREKAV DCL A+TDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1474 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1533
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1534 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDIAKQYETEKTIkdk 1593
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDI+KQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1594 nleaklakalggnkkdddkekskkstaeakaennkIDKDVAETAKNISEIALKNKKEKSG 1653
NLEAKLAKALGGNKKDDDKEKSKKSTAEAK E+NKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1654 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1713
EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1714 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1773
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1774 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1833
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1834 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1893
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1894 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1927
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 628 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 649/698 (93%), Gaps = 8/698 (1%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDGDKSEETQT 68
ETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSD LDNPTET+T+FDGDKSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqenneyq 128
QMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 eetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTNF 188
EETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDNPTET+TNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelne 248
DGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 249 eddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHL 308
EDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 309 DNPTETQTNFDGDKSEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFM 368
DNPTET+TNFD DKSEEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 369 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 428
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 429 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 488
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 489 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelq 548
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 549 kelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQ 608
KELQEYKDCIKNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 609 DLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQV-------LDCLKN 661
DLQ ++LA SVKAYKDCVS+A+NE EK+ECEKLLTPEA+K LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 662 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQ 698
AKT+ E+K C K L + + + AK S+KAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 244 bits (912), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 292/326 (90%), Positives = 308/326 (95%), Gaps = 0/326 (0%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDG 60
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSDHHL+NPTET+T+FDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 DKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneed 120
DKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDN 180
DQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETQTNFDGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnld 240
PTET+TNFDGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 241 eetqelneeddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKES 300
EETQELNEEDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 301 KESSDHHLDNPTETQTNFDGDKSEEI 326
KESSD LDNPTET+TNFDGDKSEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 195 bits (725), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 234/504 (47%), Positives = 325/504 (65%), Gaps = 64/504 (12%)
Query 431 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 485
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 486 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkel 545
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + + ++
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAKKLLEQQA 1046
Query 546 elqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER-LKQQAL----DCLKNAKTDEERN 600
DC+KNAKTEA+K++C+K+L+K+ + L ++++ DC+ A+ + E++
Sbjct 1047 L---------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 601 ECLKNIPQDLQKELLAD--MSVKAYKDCVSKARNEKEKQECEKLLTPEARKKL------- 651
EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLTPEA+K L
Sbjct 1098 ECEKLLTPE-AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESL 1156
Query 652 -------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQ 680
EQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1157 KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQ 1216
Query 681 SDILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakt 740
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+
Sbjct 1217 KKVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARN 1275
Query 741 eaekke-ceklltpeakkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQ 799
E E++ L K +E KKSVKAYLDCVS+A+ E EKKECEKLLTPEA+K+L +
Sbjct 1276 EEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAK 1335
Query 800 QALDCLKNAKTDKERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkecekllt 859
Q L+CL +A + ERK CLK+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLT
Sbjct 1336 QVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLT 1395
Query 860 PEARKLLE-EAKKSVKAYLDCVSQ 882
PEARKLLE E KKSVKAYLDCVS+
Sbjct 1396 PEARKLLEQEVKKSVKAYLDCVSR 1419
Score = 117 bits (426), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/241 (43%), Positives = 152/241 (64%), Gaps = 26/241 (10%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 532
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 533 NDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKE-AIERLKQQAL---- 587
PE R + ++ DC+KNAKT+ E++KC+K+L+K+ + L ++++
Sbjct 851 T-PEARKLLEQHAL---------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 588 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNEKEKQECEKLLT 644
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 645 PEARKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 697
PEARKKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 698 Q 698
Q
Sbjct 1020 Q 1020
Score = 40.3 bits (133), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 5/65 (7%)
Query 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 530 KLIND 534
+L +D
Sbjct 1509 NLYSD 1513 |
8) C695_02720 in NC_018937
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1461 bits (5547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1291/1414 (92%), Positives = 1342/1414 (95%), Gaps = 19/1414 (1%)
Query 526 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 583
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 584 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNEK 634
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 635 EKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 695 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 755 akkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQQALDCLKNAKTDKER 814
A+KKLEEAKKSVKAYLDCVS+A+NE EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTD ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 815 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKKSV 873
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AK SV
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 874 KAYLDCVSQakteaekkeceklltPearklleexakeSVKAYLDCVSQakneaekkecek 933
KAYLDCVSQAKTEAEKKECEKLLTPEARK LEE K SVKAYLDCVSQAKNE EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 934 lltleskkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 993
LLT E+KKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 994 TEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleea 1053
TEADKKRCVKDLPKDLQKKVLAKES+KAYKDCVS+ARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1054 kksvkaYLDCVSQakteaekkeceklltPEARKLLEEAKESVKAYKDCVSKARNekekke 1113
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLEEAKES+KAYKDCVS+ARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 1114 cekLLTPEAKKLLEQQVLDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1173
CEKLLTPEAKKLLEQQ LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1174 ARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1233
ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1234 EQEVKKSIKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1293
EQEVKKS+KAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1294 KNLPKDLQENILAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1353
KNLPKDLQEN+LAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1354 DCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1413
DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1414 SDEEKLKYLQEAREKAVADCLAMAKTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTE 1473
SDEEKLKYLQEAREKAV DCL A+TDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1474 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1533
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1534 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDIAKQYETEKTIkdk 1593
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDI+KQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1594 nleaklakalggnkkdddkekskkstaeakaennkIDKDVAETAKNISEIALKNKKEKSG 1653
NLEAKLAKALGGNKKDDDKEKSKKSTAEAK E+NKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1654 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1713
EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1714 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1773
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1774 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1833
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1834 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1893
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1894 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1927
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 628 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 649/698 (93%), Gaps = 8/698 (1%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDGDKSEETQT 68
ETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSD LDNPTET+T+FDGDKSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqenneyq 128
QMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 eetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTNF 188
EETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDNPTET+TNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelne 248
DGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 249 eddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHL 308
EDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 309 DNPTETQTNFDGDKSEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFM 368
DNPTET+TNFD DKSEEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 369 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 428
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 429 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 488
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 489 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelq 548
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 549 kelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQ 608
KELQEYKDCIKNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 609 DLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQV-------LDCLKN 661
DLQ ++LA SVKAYKDCVS+A+NE EK+ECEKLLTPEA+K LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 662 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQ 698
AKT+ E+K C K L + + + AK S+KAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 244 bits (912), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 292/326 (90%), Positives = 308/326 (95%), Gaps = 0/326 (0%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDG 60
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSDHHL+NPTET+T+FDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 DKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneed 120
DKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDN 180
DQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETQTNFDGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnld 240
PTET+TNFDGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 241 eetqelneeddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKES 300
EETQELNEEDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 301 KESSDHHLDNPTETQTNFDGDKSEEI 326
KESSD LDNPTET+TNFDGDKSEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 195 bits (725), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 234/504 (47%), Positives = 325/504 (65%), Gaps = 64/504 (12%)
Query 431 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 485
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 486 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkel 545
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + + ++
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAKKLLEQQA 1046
Query 546 elqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER-LKQQAL----DCLKNAKTDEERN 600
DC+KNAKTEA+K++C+K+L+K+ + L ++++ DC+ A+ + E++
Sbjct 1047 L---------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 601 ECLKNIPQDLQKELLAD--MSVKAYKDCVSKARNEKEKQECEKLLTPEARKKL------- 651
EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLTPEA+K L
Sbjct 1098 ECEKLLTPE-AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESL 1156
Query 652 -------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQ 680
EQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1157 KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQ 1216
Query 681 SDILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakt 740
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+
Sbjct 1217 KKVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARN 1275
Query 741 eaekke-ceklltpeakkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQ 799
E E++ L K +E KKSVKAYLDCVS+A+ E EKKECEKLLTPEA+K+L +
Sbjct 1276 EEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAK 1335
Query 800 QALDCLKNAKTDKERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkecekllt 859
Q L+CL +A + ERK CLK+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLT
Sbjct 1336 QVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLT 1395
Query 860 PEARKLLE-EAKKSVKAYLDCVSQ 882
PEARKLLE E KKSVKAYLDCVS+
Sbjct 1396 PEARKLLEQEVKKSVKAYLDCVSR 1419
Score = 117 bits (426), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/241 (43%), Positives = 152/241 (64%), Gaps = 26/241 (10%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 532
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 533 NDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKE-AIERLKQQAL---- 587
PE R + ++ DC+KNAKT+ E++KC+K+L+K+ + L ++++
Sbjct 851 T-PEARKLLEQHAL---------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 588 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNEKEKQECEKLLT 644
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 645 PEARKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 697
PEARKKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 698 Q 698
Q
Sbjct 1020 Q 1020
Score = 40.3 bits (133), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 5/65 (7%)
Query 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 530 KLIND 534
+L +D
Sbjct 1509 NLYSD 1513 |
9) C730_02720 in NC_018938
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1461 bits (5547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1291/1414 (92%), Positives = 1342/1414 (95%), Gaps = 19/1414 (1%)
Query 526 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 583
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 584 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNEK 634
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 635 EKQECEKLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 695 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 755 akkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQQALDCLKNAKTDKER 814
A+KKLEEAKKSVKAYLDCVS+A+NE EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTD ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 815 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKKSV 873
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AK SV
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 874 KAYLDCVSQakteaekkeceklltPearklleexakeSVKAYLDCVSQakneaekkecek 933
KAYLDCVSQAKTEAEKKECEKLLTPEARK LEE K SVKAYLDCVSQAKNE EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 934 lltleskkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 993
LLT E+KKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 994 TEADKKRCVKDLPKDLQKKVLAKESLKAYKDCVSKARNekekkeceklltpeakklleea 1053
TEADKKRCVKDLPKDLQKKVLAKES+KAYKDCVS+ARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1054 kksvkaYLDCVSQakteaekkeceklltPEARKLLEEAKESVKAYKDCVSKARNekekke 1113
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLEEAKES+KAYKDCVS+ARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 1114 cekLLTPEAKKLLEQQVLDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1173
CEKLLTPEAKKLLEQQ LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1174 ARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1233
ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1234 EQEVKKSIKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1293
EQEVKKS+KAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1294 KNLPKDLQENILAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1353
KNLPKDLQEN+LAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1354 DCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1413
DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1414 SDEEKLKYLQEAREKAVADCLAMAKTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTE 1473
SDEEKLKYLQEAREKAV DCL A+TDEEKRKCQNLYSDLIQEIQNKRTQ+KQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1474 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1533
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1534 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDIAKQYETEKTIkdk 1593
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDI+KQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1594 nleaklakalggnkkdddkekskkstaeakaennkIDKDVAETAKNISEIALKNKKEKSG 1653
NLEAKLAKALGGNKKDDDKEKSKKSTAEAK E+NKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1654 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1713
EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1714 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1773
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1774 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1833
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1834 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1893
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1894 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1927
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 628 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 649/698 (93%), Gaps = 8/698 (1%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDGDKSEETQT 68
ETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSD LDNPTET+T+FDGDKSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneeddqenneyq 128
QMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 eetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTNF 188
EETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDNPTET+TNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelne 248
DGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 249 eddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHL 308
EDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 309 DNPTETQTNFDGDKSEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFM 368
DNPTET+TNFD DKSEEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 369 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 428
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 429 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 488
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 489 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelq 548
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 549 kelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQ 608
KELQEYKDCIKNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 609 DLQKELLADMSVKAYKDCVSKARNEKEKQECEKLLTPEARKKLEQQV-------LDCLKN 661
DLQ ++LA SVKAYKDCVS+A+NE EK+ECEKLLTPEA+K LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 662 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQ 698
AKT+ E+K C K L + + + AK S+KAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 244 bits (912), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 292/326 (90%), Positives = 308/326 (95%), Gaps = 0/326 (0%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFENLLKESKESSDHHLDNPTETQTHFDG 60
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFE+ KESKESSDHHL+NPTET+T+FDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 DKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnldeetqelneed 120
DKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKESSDHHLDN 180
DQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETQTNFDGDKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKKPFTQQKnld 240
PTET+TNFDGDKSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 241 eetqelneeddqenneyqeetqtdLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKES 300
EETQELNEEDDQENN YQEETQT+LIDDETSKKTQQHSPQDLSNEEATE NHFE+ KES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 301 KESSDHHLDNPTETQTNFDGDKSEEI 326
KESSD LDNPTET+TNFDGDKSEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 195 bits (725), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 234/504 (47%), Positives = 325/504 (65%), Gaps = 64/504 (12%)
Query 431 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 485
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 486 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkel 545
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + + ++
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAKKLLEQQA 1046
Query 546 elqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER-LKQQAL----DCLKNAKTDEERN 600
DC+KNAKTEA+K++C+K+L+K+ + L ++++ DC+ A+ + E++
Sbjct 1047 L---------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 601 ECLKNIPQDLQKELLAD--MSVKAYKDCVSKARNEKEKQECEKLLTPEARKKL------- 651
EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLTPEA+K L
Sbjct 1098 ECEKLLTPE-AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESL 1156
Query 652 -------------------------------EQQVLDCLKNAKTDEERKKCLKDLPKDLQ 680
EQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1157 KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQ 1216
Query 681 SDILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakt 740
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+
Sbjct 1217 KKVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARN 1275
Query 741 eaekke-ceklltpeakkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQ 799
E E++ L K +E KKSVKAYLDCVS+A+ E EKKECEKLLTPEA+K+L +
Sbjct 1276 EEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAK 1335
Query 800 QALDCLKNAKTDKERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkecekllt 859
Q L+CL +A + ERK CLK+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLT
Sbjct 1336 QVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLT 1395
Query 860 PEARKLLE-EAKKSVKAYLDCVSQ 882
PEARKLLE E KKSVKAYLDCVS+
Sbjct 1396 PEARKLLEQEVKKSVKAYLDCVSR 1419
Score = 117 bits (426), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/241 (43%), Positives = 152/241 (64%), Gaps = 26/241 (10%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 532
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 533 NDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKE-AIERLKQQAL---- 587
PE R + ++ DC+KNAKT+ E++KC+K+L+K+ + L ++++
Sbjct 851 T-PEARKLLEQHAL---------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 588 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNEKEKQECEKLLT 644
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EK+ECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 645 PEARKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 697
PEARKKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 698 Q 698
Q
Sbjct 1020 Q 1020
Score = 40.3 bits (133), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (44%), Positives = 43/65 (67%), Gaps = 5/65 (7%)
Query 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 530 KLIND 534
+L +D
Sbjct 1509 NLYSD 1513 |
10) cagY in NC_017367
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1439 bits (5462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1265/1414 (90%), Positives = 1331/1414 (95%), Gaps = 19/1414 (1%)
Query 396 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEADKNECLKGLSKEAIER--LK 453
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE ++ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 454 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 504
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 505 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 564
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 565 CVSQAKTEAEKQECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 624
CVSQAK EAEK+ECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 625 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAKTEAEK 684
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKT+ E+
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 685 KRCVKDLPKDLQKKVLAKESLKAYKDCVSRARNEKEKQECeklltpeakklleeakkslk 744
K+CVKDLPKDLQ VLAKES+KAYKDCVS+A+NE EK+ECEKLLTPEAKKLLEE K
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 745 ay-kDCVSRARNEKEKQECeklltpeakklleeeakeSVKAYLDCVSQakteaekkecek 803
DCVS+A+ E EK+ECEKLLTPEA+K LEE K SVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 804 lltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 863
LLTPEAKKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 864 TEAEKKRCVKDLPKDLQKKVLAKESLKAYKDCVSRARNEKEKQECeklltpeakklleea 923
TEA+KKRCVKDLPKDLQKKVLAKES+KAYKDCVSRARNEKEK+ECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 924 kkslkaykDCVSRARNEKEKQECeklltpeakklleeakkslkaykDCVSRARNEKEKQE 983
KKS+KAY DCVS+A+ E EK+ECEKLLTPEAKKLLEEAK SLKAYKDCVSRARNEKEK+E
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 984 CEKLLTPEAKKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1043
CEKLLTPEAKKLLEQQALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1044 ARNEKEKQECeklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEAKKLL 1103
ARNEKEK+ECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEA+KLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1104 EQEVKKSVKAYLDCVSKARNEREKQECEKLLTPEARKFLAKQVLSCLEKARNEEERKACL 1163
EQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1164 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1223
KN+PKDLQ NVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1224 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1283
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1284 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRAQSKQNQLSKTE 1343
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKR+QSKQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1344 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1403
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1404 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1463
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1464 nleaklakalggnkkdddkekskkstaeakvesNKIDKDVAETAKNISEIALKNKKEKNG 1523
NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1524 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1583
EFVDENGNPIDDKKK+E QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1584 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1643
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1644 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1703
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1704 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1763
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1764 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1797
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 571 bits (2156), Expect = 1e-163, Method: Compositional matrix adjust.
Identities = 504/578 (88%), Positives = 531/578 (92%), Gaps = 8/578 (1%)
Query 9 ETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNPTETKTNFDEYELEETQT 68
ETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDNPTETKTNFD EETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNYTEAKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDN TE+KTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 189 DEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFIPLEDKSSRFS 248
DE SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 249 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 309 RAFYECISNGGNYEEClklikdkklqdqmkktlEAYKDCIKNAKTEEERIKCLDLIKDEN 368
RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAY+DCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 429 KNAKTEADKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADM 488
KNAKTEA+KNECLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 489 SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTDEERKKC 541
SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 542 LKDLPKDLQSDI-LAKESLKAYKDCVSQAKTEAEKQEC 578
K L + + + AK S+KAY DCVSQAK E EK+EC
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 846
Score = 178 bits (660), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 224/474 (48%), Positives = 312/474 (66%), Gaps = 61/474 (12%)
Query 301 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYKDCIKNAKTEE 355
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 356 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 415
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + K+ +
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAK-KLLEQQ 1045
Query 416 GLQKELQEYKDCIKNAKTEADKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 465
+L DC+KNAKTEADK+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1046 AL--------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 466 --------------DEERN------ECLKNIPQDLQ------------KELLADM--SVK 491
+E ++ +C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 492 AYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 551
AYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 552 DILAKESLKAYKDCVSQAKTEAEKQECeklltpeakklleeeakeSVKAYLDCVSQakte 611
+LAKES+KAY DCVS+A+ E EK+E L K L EEAKES+KAY DC+SQA+ E
Sbjct 1218 KVLAKESVKAYLDCVSRARNEKEKKE-CEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 612 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQ 670
E++ L K +E KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 671 ALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESLKAYKDCVSRARNEKEKQEC 724
L+CL +A E E+K C+K+LPKDLQ +VLAKESLKAYKDC+S+ARNE E++ C
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRAC 1390
Score = 158 bits (585), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 175/196 (90%), Positives = 180/196 (92%), Gaps = 0/196 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNPTETKTNFDE 60
MNEENDKLETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSDHHL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YELEETQTQMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneed 120
EETQTQMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDN 180
DQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 YTEAKTNFDEYESEEI 196
TE+KTNFD SEE
Sbjct 181 PTETKTNFDGDKSEET 196
Score = 143 bits (527), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 166/188 (89%), Positives = 170/188 (91%), Gaps = 0/188 (0%)
Query 9 ETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNPTETKTNFDEYELEETQT 68
ETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDNPTETKTNFD EETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNYTEAKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDN TE+KTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DEYESEEI 196
D SEE
Sbjct 319 DGDKSEET 326
Score = 111 bits (406), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/251 (44%), Positives = 161/251 (65%), Gaps = 26/251 (10%)
Query 343 AYKDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 402
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 403 NDPEIREKFRKELGLQKELQEYKDCIKNAKTEADKNECLKGLSKE-AIERLKQQAL---- 457
PE R K+ + +L DC+KNAKT+ +++ C+K+L+K+ + L ++++
Sbjct 851 T-PEAR-KLLEQHAL--------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 458 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNekekkecekLLT 514
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EKKECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 515 PEAKKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 567
PEA+KKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 568 QAKTEAEKQEC 578
QAK E EK+EC
Sbjct 1020 QAKNEDEKKEC 1030
Score = 46.1 bits (155), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/115 (37%), Positives = 70/115 (61%), Gaps = 14/115 (12%)
Query 343 AYKDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 399
A KDC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 400 KLIND--PEIREKF----RKELGLQKELQEYKDCIKNAKTEADK---NECLKGLS 445
+L +D EI++K +++L+ L++ +C+ N +D+ ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
11) K751_03260 in NC_021218
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1438 bits (5459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1278/1414 (91%), Positives = 1336/1414 (95%), Gaps = 19/1414 (1%)
Query 396 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEDEKNECLKGLSKEAIER--LK 453
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE+E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 454 QQ----ALDCLKNAKTDEERKKCLK-----NIPQDLQKELLADMSVKAYKDCVSRARNek 504
QQ ALDCLKNAKTDEERK CLK +I + ++KEL + ++ YKDC+ A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 505 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 564
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 565 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 624
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 625 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKSAKTDEER 684
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLK+AKTDEER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 685 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE-AKESL 743
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKECEKLLTPEA+KLLEE AKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 744 KAYKDCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkecek 803
KAY DCVS+A+ E EKKECEKLLTPEA+K LEE K SVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 804 lltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKNLLEQQALDCLKNAK 863
LLTPEAKKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAK+LLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 864 TESEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNekekkeceklltpeakklleea 923
TE++KKRCVKDLPKDLQKKVLAKESVKAY DCVSRARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 924 keslkaYKDCVSQAKTEDEKKECeklltpeakklleeakeslkaYKDCVSRARNEKEKQE 983
K S+KAY DCVSQAKTE EKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEK+E
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 984 CEKLLTPEAKNLLEQQALDCLKNAKTESEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1043
CEKLLTPEAK+LLEQQALDCLKNAKTE++KKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1044 ARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEAKKLL 1103
ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEA+KLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1104 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLSCLEKARNEEERKACL 1163
EQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1164 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1223
KN+PKDLQ NVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1224 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1283
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1284 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1343
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1344 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1403
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1404 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1463
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1464 nleaklakalggnkkdddkekskkstteaktesNKIDKDVAETAKNISEIALKNKKEKSG 1523
NLEAKLAKALGGNKKDDDKEKSKKST+EAK ESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1524 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1583
EFVDENGNPIDDKKK+E QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1584 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1643
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1644 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1703
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1704 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1763
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1764 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1797
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 570 bits (2153), Expect = 2e-163, Method: Compositional matrix adjust.
Identities = 501/568 (89%), Positives = 525/568 (93%), Gaps = 8/568 (1%)
Query 9 ETSKKTQQHSPQDLSNEETTEANHFedsskeskessdHHLDNPTETKTNFDEYESEETQT 68
ETSKKTQQHSPQDLSNEE+TE NHFEDSSKESKESSD LDNPTETKTNFD SEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNPTEAKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDNPTE+KTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 189 DEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFIPLEDKSSRFS 248
DE SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 249 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 309 RAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 368
RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 429 KNAKTEDEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKNIPQDLQKELLADM 488
KNAKTE EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 489 SVKAYKDCVSRARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTDEERKKC 541
SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 542 LKDLPKDLQSDI-LAKESLKAYKDCVSQ 568
K L + + + AK S+KAY DCVSQ
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 188 bits (697), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 246/506 (49%), Positives = 331/506 (66%), Gaps = 62/506 (12%)
Query 301 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 355
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 356 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 415
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + K+ +
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAK-KLLEQQ 1045
Query 416 GLQKELQEYKDCIKNAKTEDEKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 465
+L DC+KNAKTE +K+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1046 AL--------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 466 --------------DEERKK------CLKNIPQDLQ------------KELLADM--SVK 491
+E +K C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 492 AYKDCVSRARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 551
AYKDCVSRARNEKEKKECEKLLTPEAKK LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 552 DILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakte 611
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+ E
Sbjct 1218 KVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 612 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQ 670
E++ L K +E KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 671 ALDCLKSAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltP 730
L+CL A +EERK CLK+LPKDLQ +VLAKES+KAY DC+SQA+ E E++ CEKLLTP
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTP 1396
Query 731 EARKLLE-EAKESLKAYKDCVSRARN 755
EARKLLE E K S+KAY DCVSRARN
Sbjct 1397 EARKLLEQEVKKSVKAYLDCVSRARN 1422
Score = 165 bits (608), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 176/199 (89%), Positives = 183/199 (92%), Gaps = 0/199 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETTEANHFedsskeskessdHHLDNPTETKTNFDE 60
MNEENDKLETSKKTQQHSPQDLSNEE+TE NHFEDSSKESKESSDHHL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneed 120
SEETQTQMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDN 180
DQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTEAKTNFDEYESEEITND 199
PTE+KTNFD SEE +
Sbjct 181 PTETKTNFDGDKSEETQTQ 199
Score = 149 bits (549), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 167/191 (88%), Positives = 173/191 (91%), Gaps = 0/191 (0%)
Query 9 ETSKKTQQHSPQDLSNEETTEANHFedsskeskessdHHLDNPTETKTNFDEYESEETQT 68
ETSKKTQQHSPQDLSNEE+TE NHFEDSSKESKESSD LDNPTETKTNFD SEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFedsskeskessdHHLDNPTEAKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESSD LDNPTE+KTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DEYESEEITND 199
D SEE +
Sbjct 319 DGDKSEETQTQ 329
Score = 104 bits (376), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/290 (40%), Positives = 179/290 (62%), Gaps = 32/290 (11%)
Query 300 AEIEDKNPLRAFYECISNG---GNYEEClklikdkklqdqmkktlE---AYNDCIKNAKT 353
++I K++++A+ +C+S++ ++ EC KL+ + + E AY DC+ +AKT
Sbjct 742 SDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKT 801
Query 354 EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRK 413
E E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE R K+
Sbjct 802 EAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAR-KLLE 859
Query 414 ELGLQKELQEYKDCIKNAKTEDEKNECLKGLSKE-AIERLKQQAL----DCLKNAKTDEE 468
+ +L DC+KNAKT++E++ C+K+L+K+ + L ++++ DC+ +AK + E
Sbjct 860 QHAL--------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAE 911
Query 469 RKKCLKNIPQDLQKELLAD---MSVKAYKDCVSRARNekekkecekLLTPEAKKKLEQQV 525
+K C K + + K LL + SVKAY DCVS+A+ E EKKECEKLLTPEA+KKLE+
Sbjct 912 KKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 526 ------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVSQ 568
LDC+ +AK ++E+K C K L P + AK S+KAY DCVSQ
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQ 1020
Score = 45.6 bits (153), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 70/115 (61%), Gaps = 14/115 (12%)
Query 343 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 399
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 400 KLIND--PEIREKF----RKELGLQKELQEYKDCIKN---AKTEDEKNECLKGLS 445
+L +D EI++K +++L+ L++ +C+ N + ++ ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
12) cagY in NC_017365
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1426 bits (5414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1265/1414 (90%), Positives = 1328/1414 (94%), Gaps = 19/1414 (1%)
Query 525 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 582
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 583 QQ----ALDCLKNAKTDEERKECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 633
QQ ALDCLKNAKTDEERKECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 634 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 693
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 694 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 753
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 754 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAKTDGER 813
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTD ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 814 KKCLKDLPKDLQKKVLAKESLKAYKDCVSRARNekekke-ceklltpeakklleeakesl 872
KKC+KDLPKDLQ VLAKES+KAYKDCVS+A+NE EKKE L K L EEAKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 873 kaYKDCVSQakteaekkeceklltpeakklleeeakeSIKAYLDCVSQakteaekkecek 932
KAY DCVSQAKTEAEKKECEKLLTPEA+K LEE K S+KAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 933 lltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAK 992
LLTPEAKKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLEQQALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 993 TDGERKKCLKDLPKDLQKKVLAKESLKAYKDCVSRARNekekkeceklltpeakklleea 1052
T++++K+C+KDLPKDLQKKVLAKES+KAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1053 keslkaYKDCLSQARNEEERRACeklltpeakklleeakeslkaYKDCVSRARNEKEKQE 1112
K S+KAY DC+SQA+ E E++ CEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEK+E
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 1113 CEKLLTPEAKKLLEQQALDCLKNAKTEAEKKRCAKDLPKDLQKKVLAKESVKAYLDCVSR 1172
CEKLLTPEAKKLLEQQALDCLKNAKTEA+KKRC KDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1173 ARNEKDKKECeklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEARKLL 1232
ARNEK+KKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1233 EQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKARNEEERKACL 1292
EQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVLNCLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1293 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1352
KN+PKDLQ NVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1353 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1412
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1413 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1472
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1473 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1532
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1533 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1592
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1593 nleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIALKNKKEKSG 1652
NLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1653 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1712
EFVDENGNPIDDKKK+E QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1713 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1772
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1773 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1832
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1833 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1892
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1893 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1926
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 686 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 612/698 (88%), Positives = 641/698 (92%), Gaps = 9/698 (1%)
Query 9 ETSKKTQQHSPQDLSNEEATEANhfedfskeskessdh-LDNPTETKTNFDEYESEETQT 67
ETSKKTQQHSPQDLSNEEATE NHFED SKESKESSD LDNPTETKTNFD SEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 68 QMDFggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLDEETQELNEEYDQENNGYQ 127
QMD GG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEE DQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 128 EETQMDLIDDETSKKTQQYSPQDLSNEETTKANHFedsskesqessdHHLDNPTETKTNF 187
EETQ +LIDDETSKKTQQ SPQDLSNEE+T NHFEDSSKES+ESSD LDNPTETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 188 DEYESEETQTQMDFggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLDEETQELNE 247
D SEETQTQMD GG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 248 EYDQENNGYQEETQMDLIDDETSKKTQQYSPQDLSNEETTKANHFedsskesqessdHHL 307
E DQENNGYQEETQ +LIDDETSKKTQQ SPQDLSNEE+T NHFEDSSKES+ESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 308 DNPTETKTNFDEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFI 367
DNPTETKTNFDE SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 368 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 427
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 428 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 487
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 488 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQ 547
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 548 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQ 607
KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 608 DLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKN 660
DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 661 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQ 697
AKT+ E+K C K L + + + AK S+KAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 277 bits (1035), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 275/326 (85%), Positives = 288/326 (89%), Gaps = 1/326 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEEATEANh-fedfskeskessdhLDNPTETKTNFDE 59
MNEENDKLETSKKTQQHSPQDLSNEEATE NH + S +HL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 60 YESEETQTQMDFggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLDEETQELNEEY 119
SEETQTQMD GG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLDEETQELNEE
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 120 DQENNGYQEETQMDLIDDETSKKTQQYSPQDLSNEETTKANHFedsskesqessdHHLDN 179
DQENNGYQEETQ +LIDDETSKKTQQ SPQDLSNEE+T NHFEDSSKES+ESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 180 PTETKTNFDEYESEETQTQMDFggnetsessngsLADKLFKKARKLVDNKKPFTQQKNLD 239
PTETKTNFD SEETQTQMD GG+ETSESSNGSLADKLFKKARKLVDNK+PFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 240 EETQELNEEYDQENNGYQEETQMDLIDDETSKKTQQYSPQDLSNEETTKANHFedsskes 299
EETQELNEE DQENNGYQEETQ +LIDDETSKKTQQ SPQDLSNEE+T NHFEDSSKES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 300 qessdHHLDNPTETKTNFDEYESEEI 325
+ESSD LDNPTETKTNFD SEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 175 bits (647), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 218/467 (47%), Positives = 302/467 (65%), Gaps = 61/467 (13%)
Query 430 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 484
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 485 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 544
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + K+ +
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAK-KLLEQQ 1045
Query 545 GLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 594
+L DC+KNAKTEA+K+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1046 AL--------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 595 --------------DEERK------ECLKNIPQDLQ------------KELLADM--SVK 620
+E +K +C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 621 AYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 680
AYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 681 DILAKESLKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakte 740
+LAKES+KAY DCVS+ + K L K L EEAKES+KAY DC+SQA+ E
Sbjct 1218 KVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 741 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQ 799
E++ L K +E KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 800 ALDCLKNAKTDGERKKCLKDLPKDLQKKVLAKESLKAYKDCVSRARN 846
L+CL +A + ERK CLK+LPKDLQ +VLAKESLKAYKDC+S+ARN
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARN 1383
Score = 104 bits (379), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/290 (40%), Positives = 179/290 (62%), Gaps = 32/290 (11%)
Query 429 AEIEDKNPLRAFYECISNG---GNYEEClklikdkklqdqmkktlE---AYNDCIKNAKT 482
++I K++++A+ +C+S++ ++ EC KL+ + + E AY DC+ +AKT
Sbjct 742 SDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKT 801
Query 483 EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRK 542
E E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE R K+
Sbjct 802 EAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAR-KLLE 859
Query 543 ELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKE-AIERLKQQAL----DCLKNAKTDEE 597
+ +L DC+KNAKT+ E++ C+K+L+K+ + L ++++ DC+ +AK + E
Sbjct 860 QHAL--------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAE 911
Query 598 RKECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV 654
+KEC K + + K LL + SVKAY DCVS+A+ E EKKECEKLLTPEA+KKLE+
Sbjct 912 KKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 655 ------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVSQ 697
LDC+ +AK ++E+K C K L P + AK S+KAY DCVSQ
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQ 1020
Score = 45.0 bits (151), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 69/115 (60%), Gaps = 14/115 (12%)
Query 472 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 528
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 529 KLIND--PEIREKF----RKELGLQKELQEYKDCIKN---AKTEAEKNECLKGLS 574
+L +D EI++K +++L+ L++ +C+ N + + ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
14) HMPREF4655_21077 in NC_017360
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1420 bits (5389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1264/1414 (90%), Positives = 1325/1414 (94%), Gaps = 19/1414 (1%)
Query 396 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 453
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 454 QQ----ALDCLKNAKTDEERKECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 504
QQ ALDCLKNAKTDEERKECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 505 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 564
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 565 CVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 624
CVS+A+NE EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 625 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAKTDEER 684
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLE++ALDCLKNAKTDEER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 685 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekke-ceklltpeakklleeakesl 743
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKE L K L EEAKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 744 kaYKDCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkecek 803
KAY DCVS+A+ E EKKECEKLLTPEA+K LEE K SVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEK 994
Query 804 lltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAK 863
LLTPEAKKKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEAKKLLE+QALDCLKNAK
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 864 TDEERKRCVKDLPKDLQKKVLAKKSVKAYKDCVSRARNekekkeceklltpeakklleea 923
T+ ++KRCVKDLPKDLQKKVLAK SVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 924 keslkaYKDCVSRARNekekkeceklltpeakklleeakeslkaYKDCVSRARNEKEKKE 983
K S+KAY DCVS+A+ E EKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 984 CEQLLTPEAKKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1043
CE+LLTPEAKKLLEQQALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 1044 ARNEKEKKECEQLLTPeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEAKKLL 1103
ARNEKEKKECE+LLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEA+KLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1104 EQEVKKSVKAYLDCVSKARNEKEKQECEKLLTPEARKFLAKQVLSCLEKARNEEERKACL 1163
EQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1164 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1223
KN+PKDLQ NVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1224 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1283
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1284 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRIQSKQNQLSKTE 1343
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKR QSKQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1344 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1403
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1404 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1463
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1464 nleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIALKNKKEKSG 1523
NLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1524 EFVDENGNPIDDKKKTETQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1583
EFVDENGNPIDDKKK+E QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1584 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1643
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1644 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1703
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1704 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1763
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1764 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1797
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 573 bits (2163), Expect = 3e-164, Method: Compositional matrix adjust.
Identities = 502/571 (88%), Positives = 526/571 (93%), Gaps = 8/571 (1%)
Query 9 ETSKKTQQHSPQDLSNEEATEANHFedsskeskerseHHLDNPTETKTNFDEYESEETQT 68
ETSKKTQQHSPQDLSNEEATE NHFEDSSKESKE S+ LDNPTETKTNFD SEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDsskeskesseHHLDNPTETKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESS+ LDNPTETKTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 189 DEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFMPLEDKSSRFS 248
DE SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 249 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 309 RDFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 368
R FYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQKELQEYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 429 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQDLQKELLADM 488
KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK CLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 489 SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTDEERKKC 541
SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 542 LKDLPKDLQSDI-LAKESLKAYKDCVSRARN 571
K L + + + AK S+KAY DCVS+A+N
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQAKN 839
Score = 174 bits (645), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 218/464 (47%), Positives = 300/464 (65%), Gaps = 61/464 (13%)
Query 301 EIEDKNPLRDFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 355
E E K++++ + +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 356 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKEL 415
E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+ PE + K+ +
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAK-KLLEQQ 1045
Query 416 GLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 465
+L DC+KNAKTEA+K+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1046 AL--------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 466 --------------DEERK------ECLKNIPQDLQ------------KELLADM--SVK 491
+E +K +C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 492 AYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 551
AYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 552 DILAKESLKAYKDCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakte 611
+LAKES+KAY DCVSRARN K L K L EEAKES+KAY DC+SQA+ E
Sbjct 1218 KVLAKESVKAYLDCVSRARN-EKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 612 aekke-ceklltpeakkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQ 670
E++ L K +E KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 671 ALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQ 714
L+CL +A +EERK CLK+LPKDLQ +VLAKES+KAY DC+SQ
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQ 1380
Score = 167 bits (616), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 176/199 (89%), Positives = 182/199 (92%), Gaps = 0/199 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEEATEANHFedsskeskerseHHLDNPTETKTNFDE 60
MNEENDKLETSKKTQQHSPQDLSNEEATE NHFEDSSKESKE S+HHL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 120
SEETQTQMDSGG+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDsskeskesseHHLDN 180
DQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESS+ LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETKTNFDEYESEEITND 199
PTETKTNFD SEE +
Sbjct 181 PTETKTNFDGDKSEETQTQ 199
Score = 151 bits (557), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 167/191 (88%), Positives = 172/191 (91%), Gaps = 0/191 (0%)
Query 9 ETSKKTQQHSPQDLSNEEATEANHFedsskeskerseHHLDNPTETKTNFDEYESEETQT 68
ETSKKTQQHSPQDLSNEEATE NHFEDSSKESKE S+ LDNPTETKTNFD SEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEEATEANHFEDsskeskesseHHLDNPTETKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEEATE NHFEDSSKESKESS+ LDNPTETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DEYESEEITND 199
D SEE +
Sbjct 319 DGDKSEETQTQ 329
Score = 105 bits (382), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/244 (44%), Positives = 156/244 (64%), Gaps = 26/244 (10%)
Query 343 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLI 402
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E++EC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 403 NDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKE-AIERLKQQAL---- 457
PE R K+ + +L DC+KNAKT+ E++ C+K+L+K+ + L ++++
Sbjct 851 T-PEAR-KLLEQHAL--------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 458 DCLKNAKTDEERKECLKNIPQDLQKELLAD---MSVKAYKDCVSKARNekekkecekLLT 514
DC+ +AK + E+KEC K + + K LL + SVKAY DCVS+A+ E EKKECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 515 PEAKKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCVS 567
PEA+KKLE+ LDC+ +AK ++E+K C K L P + AK S+KAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 568 RARN 571
+A+N
Sbjct 1020 QAKN 1023
Score = 45.0 bits (151), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 70/115 (61%), Gaps = 14/115 (12%)
Query 343 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 399
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 400 KLIND--PEIREKF----RKELGLQKELQEYKDCIKNAKTEAEK---NECLKGLS 445
+L +D EI++K +++L+ L++ +C+ N +++ ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
16) HPSJM_02650 in NC_014560
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1404 bits (5329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1098/1423 (78%), Positives = 1178/1423 (83%), Gaps = 153/1423 (10%)
Query 550 DCLKNAKTDEERKKCLKDL-PKDLQSDILAKESLKAYKDCTSQAKTEDEKKECeklltpe 608
+C+ N+ EE CLK + K LQ ++ K +L AY+DC +AKTE+E+ C L+ E
Sbjct 573 ECISNGGNYEE---CLKLIKDKKLQDQM--KKTLEAYNDCIKNAKTEEERIKCLDLIKDE 627
Query 609 akklleeeakeSVKAYLDCVSQAKTEDEKKEC----eklltpeakkkleeakksvkaYLD 664
K + + V+ LDC+ +AKT++E+KEC + E +K E +K ++ Y D
Sbjct 628 NLKKSLLNQQ-KVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKD 686
Query 665 CVSQAKTEDEKKECEKLLTPEAKKLLEQQALDCLKNAKTDEERKECLKDLPKDLQKKVLA 724
C+ +AKTE EK+EC K L+ EA L QQALDCLKNAKTDEERK CLKDLPKDLQ +LA
Sbjct 687 CIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILA 746
Query 725 KESVRVY---------------------------------------LDCVSKAKNEAERK 745
KESV+ Y LDCVS+AK EAE+K
Sbjct 747 KESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKK 806
Query 746 ECEKLLTPEARKLLEEAKESVKAYLDCVSRARNekekkecekLLTPEARKLLEE------ 799
ECEKLLTPEARK LEEAK SVKAYLDCVS+A+NE EKKECEKLLTPEARKLLE+
Sbjct 807 ECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCL 866
Query 800 -------------------------SKKSVKAYLDCVSQAKNEAERKECEKLLTPEARKL 834
+K SVKAY DCVSQAKNEAE+KECEKLLTPEA+KL
Sbjct 867 KNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKL 926
Query 835 LEE-AKESVKAYKDCVSRARNekekkecekLLTPEARKLLEESKKSVKAYLDCVSQAKNE 893
LEE AKESVKAY DCVS+A+ E EKKECEKLLTPEARK LEE+KKSVKAYLDCVSQAKNE
Sbjct 927 LEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNE 986
Query 894 AERKECEKLLTPEARKLLEEAKKSVKAYLDCVSRARNekekkecekLLTPEARKLLENQA 953
E+KECEKLLTPEA+K LEEAKKSVKAYLDCVS+A+NE EKKECEKLLTPEA+KLLE+QA
Sbjct 987 DEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQA 1046
Query 954 LDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSKAKNEAERKECEKLLTPE 1013
LDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESV+ Y DCVS+A+NE E+KECEKLLTPE
Sbjct 1047 LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPE 1106
Query 1014 ARKLLEEAKESVKAYKDCVSRARNEKEKQECEKLLTPEARKLLEQEVKKSVKAYLDCVSR 1073
A+KLLEEAK SVKAY DCVS+A+ E EK+ECEKLLTPEA+KLLE E K S+KAY DCVSR
Sbjct 1107 AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE-EAKESLKAYKDCVSR 1165
Query 1074 ARNekekkecekLLTPKARKLLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKKSV 1133
ARNEKEKKECEKLLTP A+KLLE+QALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAK SV
Sbjct 1166 ARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESV 1225
Query 1134 KAYLDCVSRARN--------------------------------------EKEKQECEKL 1155
KAYLDCVSRARN E E++ CEKL
Sbjct 1226 KAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKL 1285
Query 1156 LTPEARKLLE-EAKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKLLEE---------- 1204
LTPEARKLLE E KKSVKAYLDCVS+A+ E EK+ECEKLLTPEARK+L
Sbjct 1286 LTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAG 1345
Query 1205 ---------------------AKESLKAYKDCLSQARNETERRACEKLLTPEARKLLEQE 1243
AKESLKAYKDCLSQARNE ERRACEKLLTPEARKLLEQE
Sbjct 1346 NEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQE 1405
Query 1244 VKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLEKQRQQKDKAIKDCLKNADPNDRA 1303
VKKSVKAYLDCVSRARNEKEK+ECEKLLTPEARKFL K+ QQKDKAIKDCLKNADPNDRA
Sbjct 1406 VKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA 1465
Query 1304 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRAQN 1363
AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKR+Q+
Sbjct 1466 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS 1525
Query 1364 KQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDRIYS 1423
KQNQLSKTERLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVDRIYS
Sbjct 1526 KQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYS 1585
Query 1424 DLRSRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY 1483
DLR+RKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY
Sbjct 1586 DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY 1645
Query 1484 ETEKTIkdksleaklakalggdkkdddkekskkPTAETKAESNKIDKDVAETAKNISEIA 1543
ETEKTIKDK+LEAKLAKALGG+KKDDDKEKSKK+TAE+K ESNKIDKDVAETAKNISEIA
Sbjct 1646 ETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIA 1705
Query 1544 LKNKKEKSGDFVDENGNPIddkkkeekqdeTSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1603
LKNKKEK+G+FVDENGNPIDDKKK EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS
Sbjct 1706 LKNKKEKNGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1765
Query 1604 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1663
KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT
Sbjct 1766 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1825
Query 1664 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1723
PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG
Sbjct 1826 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1885
Query 1724 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1783
LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD
Sbjct 1886 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1945
Query 1784 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1826
IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1946 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 1108 bits (4202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 992/1344 (74%), Positives = 1120/1344 (84%), Gaps = 80/1344 (5%)
Query 9 ETSKKAQQHSPQDLSNEEATEANHFEDLLKEESSDN--HLDNSTETQTHFDEDKLEETQT 66
ETSKK+QQHSPQDLSNEEATE NHFED KE + LDN+TET+T+FD DK EETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 67 QMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeetqelneeddqenneyq 126
QMDS G+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 127 eetqtGLIDDETSKKAQQHSPQDLSNEEATEVNHFEDLLKEESSDNHLDNPTESSDNHLD 186
EETQTGLIDDETSKK+QQHSPQDLSNEEATE+NHFE +
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFE--------------------DSSK 428
Query 187 NSTESSDNHLDNPTETKTQETKTHFDEDKLEEITDDSNDQEiikgskkkyiiggivvavl 246
+S ESSD LDNPTETKT +FDEDK EEIT+DSNDQEIIKGSKKKYIIGGIVVAVL
Sbjct 429 ESKESSDPYLDNPTETKT-----NFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVL 483
Query 247 iviilFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNL 306
IVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNL
Sbjct 484 IVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNL 543
Query 307 FFNDDPNRTLYNYLNIAEIEDKNPLRAFYECIGNGGNYEECLKLIKDKKLQEQMKKTLEA 366
FFNDDPNRTLYNYLNIAEIEDKNPLRAFYECI+NGGNYEECLKLIKDKKLQ+QMKKTLEA
Sbjct 544 FFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEA 603
Query 367 YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLIN 426
YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLIN
Sbjct 604 YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLIN 663
Query 427 DPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNA 486
DPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNA
Sbjct 664 DPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNA 723
Query 487 KTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSRARNekekkecekLLTPEAKKKLEQ 546
KTDEER+ CLK++P+DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE+
Sbjct 724 KTDEERKKCLKDLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEE 783
Query 547 QV-------LDCLKNAKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCTSQAKTEDEK 598
+ LDC+ +AKT+ E+K C K L + + + AK S+KAY DC SQAK EDEK
Sbjct 784 EAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEK 843
Query 599 KECeklltpeakklleeeakeSVKAYLDCVSQAKTEDEKKECeklltpeakkkleeakks 658
KECEKLLTPEA+KLLE++A LDC+ +AKT++E+K C P + AK S
Sbjct 844 KECEKLLTPEARKLLEQHA-------LDCLKNAKTDEERKKC-VKDLPKDLQSDVLAKES 895
Query 659 vkaYLDCVSQAKTEDEKKECEKLLTPEAKKLLEQQA-------LDCLKNAKTDEERKECL 711
VKAY DCVSQAK E EKKECEKLLTPEAKKLLE++A LDC+ +AKT+ E+KEC
Sbjct 896 VKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECE 955
Query 712 KDLPKDLQKKV-LAKESVRVYLDCVSKAKNEAERKECEKLLTPEARKLLEEAKESVKAYL 770
K L + +KK+ AK SV+ YLDCVS+AKNE E+KECEKLLTPEA+K LEEAK SVKAYL
Sbjct 956 KLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYL 1015
Query 771 DCVSRARNekekkecekLLTPEARKLLEESKKSVKAYLDCVSQAKNEAERKECEKLLTPE 830
DCVS+A+NE EKKECEKLLTPEA+KLLE+ LDC+ +AK EA++K C K L +
Sbjct 1016 DCVSQAKNEDEKKECEKLLTPEAKKLLEQQA------LDCLKNAKTEADKKRCVKDLPKD 1069
Query 831 -ARKLLEEAKESVKAYKDCVSRARNekekkecekLLTPEARKLLEESKKSVKAYLDCVSQ 889
+K+L AKESVKAYKDCVSRARNEKEKKECEKLLTPEA+KLLEE+KKSVKAYLDCVSQ
Sbjct 1070 LQKKVL--AKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQ 1127
Query 890 AKNEAERKECEKLLTPEARKLLEEAKKSVKAYLDCVSRARNekekkecekLLTPEARKLL 949
AK EAE+KECEKLLTPEA+KLLEEAK S+KAY DCVSRARNEKEKKECEKLLTPEA+KLL
Sbjct 1128 AKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLL 1187
Query 950 ENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSKAKNEAERKECEKL 1009
E+QALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESV+ YLDCVS+A+NE E+KECEKL
Sbjct 1188 EQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKL 1247
Query 1010 LTPEARKLLEEAKESVKAYKDCVSRARNEKEKQECEKLLTPEARKLLEQEVKKSVKAYLD 1069
LTPEA+KLLEEAKES+KAYKDC+S+ARNE E++ CEKLLTPEARKLLEQEVKKSVKAYLD
Sbjct 1248 LTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLD 1307
Query 1070 CVSRARNekekkecekLLTPKARKLLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLA 1129
CVS+A+ E EKKECEKLLTP ARK+L +Q L+CL +A E E+K C+K+LPKDLQ +VLA
Sbjct 1308 CVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLA 1367
Query 1130 KKSVKAYLDCVSRARNEKEKQECEKLLTPEARKLLE-EAKKSVKAYLDCVSRARNEKEKQ 1188
K S+KAY DC+S+ARNE E++ CEKLLTPEARKLLE E KKSVKAYLDCVSRARNEKEK+
Sbjct 1368 KESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKK 1427
Query 1189 ECEKLLTPEARKLLE-EAKESLKAYKDCLSQARNETERRA---CEKLLTPEAR-KLLEQE 1243
ECEKLLTPEARK+L E ++ KA KDCL +A + +R A C L+ E + K L++
Sbjct 1428 ECEKLLTPEARKFLAKELQQKDKAIKDCLKNA-DPNDRAAIMKCLDGLSDEEKLKYLQEA 1486
Query 1244 VKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLEKQRQQKDKAI---------KDCL 1294
K+V LDC+ AR + EK+ C++L + + + +K+ Q K++ + +CL
Sbjct 1487 REKAV---LDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECL 1543
Query 1295 KN-ADPNDRAAIMKCLDGLSDEEK 1317
N DP D+ AI +CL+GLSD E+
Sbjct 1544 DNLDDPTDQQAIEQCLEGLSDSER 1567
Score = 141 bits (518), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 154/217 (71%), Positives = 180/217 (83%), Gaps = 4/217 (1%)
Query 1 MNEENDKLETSKKAQQHSPQDLSNEEATEANHFEDLLKEESSD--NHLDNSTETQTHFDE 58
MNEENDKLETSKK+QQHSPQDLSNEEATE NHFED KE +HL+N+TET+T+FD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 59 DKLEETQTQMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeetqelneed 118
DK EETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 119 dqenneyqeetqtGLIDDETSKKAQQHSPQDLSNEEATEVNHFEDLLKEESSDN--HLDN 176
DQENN YQEETQTGLIDDETSKK+QQHSPQDLSNEEATE+NHFED KE + LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 177 PTESSDNHLDNSTESSDNHLDNPTETKTQETKTHFDE 213
PTE+ N ++ +E ++ ++D+ + ++ ++ + +
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLAD 217
Score = 128 bits (467), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 146/209 (70%), Positives = 171/209 (82%), Gaps = 4/209 (1%)
Query 9 ETSKKAQQHSPQDLSNEEATEANHFEDLLKEESSDN--HLDNSTETQTHFDEDKLEETQT 66
ETSKK+QQHSPQDLSNEEATE NHFED KE + LDN+TET+T+FD DK EETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 67 QMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeetqelneeddqenneyq 126
QMDS G+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENN YQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 127 eetqtGLIDDETSKKAQQHSPQDLSNEEATEVNHFEDLLKEESSDN--HLDNPTESSDNH 184
EETQTGLIDDETSKK+QQHSPQDLSNEEATE+NHFED KE + LDNPTE+ N
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 185 LDNSTESSDNHLDNPTETKTQETKTHFDE 213
++ +E ++ ++D+ + ++ ++ + +
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLAD 347
Score = 38.5 bits (126), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/83 (54%), Positives = 51/83 (62%), Gaps = 25/83 (30%)
Query 137 ETSKKAQQHSPQDLSNEEATEVNHFEDLLKEESSDNHLDNPTESSDNHLDNSTESSDNHL 196
ETSKK+QQHSPQDLSNEEATE+NHFE + +S ESSD+HL
Sbjct 9 ETSKKTQQHSPQDLSNEEATEINHFE--------------------DSSKESKESSDHHL 48
Query 197 DNPTETKTQETKTHFDEDKLEEI 219
+NPT ETKT+FD DK EE
Sbjct 49 NNPT-----ETKTNFDGDKSEET 66 |
19) HPPN120_02565 in NC_017378
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1376 bits (5221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1223/1415 (87%), Positives = 1288/1415 (92%), Gaps = 50/1415 (3%)
Query 519 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 576
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 577 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 627
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 628 ekkecekLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYRD 687
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAY+D
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 688 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 747
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 748 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAKTDEER 807
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTDEER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 808 KKCLKDLPKDLQKKVLAKESVKAYLDCVSQakteaekke-ceklltpeakklleeakesl 866
KKC+KDLPKDLQ VLAKESVKAY DCVSQAK EAEKKE L K L EEAKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 867 kaYKDCVSRARNekekkecekLLTPEARKLLEQEVKKSVKAYLDCVSQakteaekkecek 926
KAY DCVS+A+ E EKKECEKLLTPEARK LE E KKSVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLE-EAKKSVKAYLDCVSQAKNEDEKKECEK 994
Query 927 lltpeakklleeakeslkaYKDCLSQARNEEERKACEKLLTPeark-------------- 972
LLTPEAKK LEEAK S+KAY DC+SQA+NE+E+K CEKLLTPEA+K
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 973 ----------------lleeeakeSVKAYLDCVSQakteaekkeceklltPEARKKLEEA 1016
AKESVKAY DCVS+A+ E EKKECEKLLTPEA+K LEEA
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1114
Query 1017 KKSVKAYLDCVSQakteaekkeceklltPEARKLLEQEVKKSVKAYLDCVSRARNekekk 1076
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+KLLE E K S+KAY DCVSRARNEKEKK
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARNEKEKK 1173
Query 1077 ecekLLTPEARKLLEQQALDCLKSAKTEAERKRCVKDLPKDLQKKVLAKESVKAYLDCVS 1136
ECEKLLTPEA+KLLEQQALDCLK+AKTEA++KRCVKDLPKDLQKKVLAKESVKAYLDCVS
Sbjct 1174 ECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVS 1233
Query 1137 RARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERKACEKLLTPEARKL 1196
RARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKL
Sbjct 1234 RARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKL 1293
Query 1197 LEQEVKNSVKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLSCLEKARNEEERKAC 1256
LEQEVK+SVKAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVL+CLEKA NEEERKAC
Sbjct 1294 LEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKAC 1353
Query 1257 LKNIPKDLQKDVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAY 1316
LKN+PKDLQ +VLAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQEVKKSVKAY
Sbjct 1354 LKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAY 1413
Query 1317 LDCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRVAIMKCLDG 1376
LDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDR AIMKCLDG
Sbjct 1414 LDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDG 1473
Query 1377 LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT 1436
LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT
Sbjct 1474 LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT 1533
Query 1437 ERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTF 1496
ERLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTF
Sbjct 1534 ERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTF 1593
Query 1497 DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkd 1556
DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKD
Sbjct 1594 DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKD 1653
Query 1557 ksleaklakalggdkkdddkekskkPTAEAKAESNKIDKDVAETAKNISEIALKNKKEKS 1616
K+LEAKLAKALGG+KKDDDKEKSKK+TAEAK ESNKIDKDVAETAKNISEIALKNKKEK+
Sbjct 1654 KNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKN 1713
Query 1617 GDFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG 1676
G+FVDENGNPIDDKKK+EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG
Sbjct 1714 GEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG 1773
Query 1677 IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL 1736
IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL
Sbjct 1774 IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL 1833
Query 1737 ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER 1796
ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER
Sbjct 1834 ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER 1893
Query 1797 TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD 1856
TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD
Sbjct 1894 TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD 1953
Query 1857 VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1891
VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1954 VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 647 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/698 (87%), Positives = 641/698 (92%), Gaps = 15/698 (2%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskessdH-LDNSTETKTNFDGEKSEETQT 67
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNFDG+KSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 68 QMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 125
QMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 126 EEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdH-LDNSTETKTNF 184
EE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 185 DGEKSEETQTQMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepne 242
DG+KSEETQTQMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 243 eddqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdH-L 301
EDDQENNGYQEE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 302 DNSTETKTNFDGEKSEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFI 361
DN+TETKTNFD +KSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 362 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 421
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 422 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 481
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 482 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelq 541
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 542 kelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQ 601
KELQEYKDCIKNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 602 DLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEARKKLEQQV-------LDCLKN 654
DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEA+K LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 655 AKTDEERKKCLKDLPKDLQSDI-LAKESVKAYRDCVSQ 691
AKT+ E+K C K L + + + AK SVKAY DCVSQ
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 402 bits (1514), Expect = 7e-113, Method: Compositional matrix adjust.
Identities = 574/975 (59%), Positives = 686/975 (71%), Gaps = 146/975 (14%)
Query 465 EAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKL 524
+ Y+DCIKNAKTE E+ CL + E + + L+QQ ALDCLKNAKTDEER+ CLK
Sbjct 682 QEYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQQ----ALDCLKNAKTDEERKKCLK- 734
Query 525 INDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQA----- 579
++ ++ ++ + ++ YKDC+ +AK EAEK+ C K L+ EA L ++A
Sbjct 735 ----DLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVK 790
Query 580 --LDCLKNAKTDEERNECLKNIPQDLQKELL-ADMSVKAYKDCVSKARNekekkecekLL 636
LDC+ +AKT+ E++EC K + + +K L A SVKAY DCVS+A+NE EKKECEKLL
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 637 TPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYRDCVSQaktea 696
TPEARK LEQ+ LDCLKNAKTDEERKKC+KDLPKDLQSD+LAKESVKAY+DCVSQAK EA
Sbjct 851 TPEARKLLEQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEA 910
Query 697 ekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeak 756
EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA+KKLEEAK
Sbjct 911 EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 757 ksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQA------LDCLKNAKTDEE---- 806
KSVKAYLDCVSQAK E EKKECEKLLTPEAKK LE+ LDC+ +AK ++E
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 1030
Query 807 ----------------------------RKKCLKDLPKDLQKKVLAKESVKAYLDCVSQa 838
+K+C+KDLPKDLQKKVLAKESVKAY DCVS+A
Sbjct 1031 EKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRA 1090
Query 839 kteaekkeceklltpeakklleeakeslkaYKDCVSRARNekekkecekLLTPEARKLLE 898
+ E EKKECEKLLTPEAKKLLEEAK S+KAY DCVS+A+ E EKKECEKLLTPEA+KLLE
Sbjct 1091 RNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE 1150
Query 899 QEVKKSVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEE 958
E K S+KAY DCVS+A+ E EKKECEKLLTPEAKKLLE+ DCL +A+ E +
Sbjct 1151 -EAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQAL------DCLKNAKTEAD 1203
Query 959 RKACEKLLTPearklleeeakeSVKAYLDCVSQakteaekkeceklltPEARKKLEEAKK 1018
+K C K L AKESVKAYLDCVS+A+ E EKKECEKLLTPEA+K LEEAK
Sbjct 1204 KKRCVKDLP--KDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKE 1261
Query 1019 SVKAYLDCVSQakteaekkeceklltPEARKLLEQEVKKSVKAYLDCVSRARNekekkec 1078
S+KAY DC+SQA+ E E++ CEKLLTPEARKLLEQEVKKSVKAYLDCVS+A+ E EKKEC
Sbjct 1262 SLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKEC 1321
Query 1079 ekLLTPEARKLLEQQALDCLKSAKTEAERKRCVKDLPKDLQKKVLAKESVKAYLDCVSRA 1138
EKLLTPEARK+L +Q L+CL A E ERK C+K+LPKDLQ +VLAKES+KAY DC+S+A
Sbjct 1322 EKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQA 1381
Query 1139 RNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERKACEKLLTPEARKLLE 1198
R NEEER+ACEKLLTPEARKLLE
Sbjct 1382 R--------------------------------------NEEERRACEKLLTPEARKLLE 1403
Query 1199 QEVKNSVKAYLDCVSRARNekekkecekLLTPEARKFLAKQ-------VLSCLEKARNEE 1251
QEVK+SVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAK+ + CL K + +
Sbjct 1404 QEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCL-KNADPN 1462
Query 1252 ERKA---CLKNIPKDLQKDVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQE 1308
+R A CL ++ + + L KA DCL AR +EE++ C++L + L QE
Sbjct 1463 DRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSD-----LIQE 1517
Query 1309 VKKSVKAYLDCVSRARNekekkecekLLTPEARKFLAKELQQKDKAIKDCLKN-ADPNDR 1367
+++ R+++ +++ L+ R L+Q +CL N DP D+
Sbjct 1518 IQN---------KRTQSKQNQ------LSKTER------LHQ----ASECLDNLDDPTDQ 1552
Query 1368 VAIMKCLDGLSDEEK 1382
AI +CL+GLSD E+
Sbjct 1553 QAIEQCLEGLSDSER 1567
Score = 276 bits (1031), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 282/326 (87%), Positives = 299/326 (92%), Gaps = 7/326 (2%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETIKANHFedsskeskess-dHLDNSTETKTNFDG 59
MNEENDKLETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESS +HL+N+TETKTNFDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 60 EKSEETQTQMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 117
+KSEETQTQMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 118 dqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdH-LDN 176
DQENNGYQEE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 177 STETKTNFDGEKSEETQTQMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLd 234
+TETKTNFDG+KSEETQTQMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 235 eeiqepneeddqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskes 294
EE QE NEEDDQENNGYQEE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 295 kessdH-LDNSTETKTNFDGEKSEEI 319
KESSD LDN+TETKTNFDG+KSEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 44.2 bits (148), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/225 (33%), Positives = 121/225 (54%), Gaps = 37/225 (16%)
Query 466 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 522
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E++EC
Sbjct 1373 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKKECE 1430
Query 523 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTE--AEKNKCLKGLSKEAIERLK---- 576
KL+ PE R + KEL+ + KDC+KNA + A KCL GLS E E+LK
Sbjct 1431 KLLT-PEARKFLAKELQQKDKAI--KDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQE 1485
Query 577 ---QQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkece 633
+ LDCLK A+TDEE+ C Q+L +L+ ++ K +++++++
Sbjct 1486 AREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNKR-----TQSKQNQ------ 1529
Query 634 kLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 678
L+ R + LD L ++ ++ +CL +L+ ++ IL+
Sbjct 1530 --LSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILG 1572 |
20) HPPC18_02525 in NC_017742
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1374 bits (5214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1227/1415 (87%), Positives = 1287/1415 (91%), Gaps = 50/1415 (3%)
Query 394 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAERNKCLKGLSKEAIER--LK 451
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE ER KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 452 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 502
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 503 ekkecekLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 562
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 563 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 622
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 623 akkkleeakesvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAKTEAER 682
A+KKLEEAK SVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKT+ ER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 683 KRCVKDLPKDLQKKVLAKESVKAYLDCVSQakteaekke-ceklltpeakklleeakesl 741
K+CVKDLPKDLQ VLAKESVKAY DCVSQAK EAEKKE L K L EEAKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 742 kaYKDCVSRARNekekkecekLLTPEAKKLLEQEVKRSVKAYLDCVSQakteaekkecek 801
KAY DCVS+A+ E EKKECEKLLTPEA+K LE E K+SVKAYLDCVSQAK E EKKECEK
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLE-EAKKSVKAYLDCVSQAKNEDEKKECEK 994
Query 802 lltpeakklleeakeslkaYKDCVSRARNEKEKQECEKLLTPEAKKLLEQEV-------- 853
LLTPEAKK LEEAK S+KAY DCVS+A+NE EK+ECEKLLTPEAKKLLEQ+
Sbjct 995 LLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAK 1054
Query 854 ----------------------KKSVKAYLDCVSQakteaekkacekLLTPEAKKLLEQE 891
K SVKAY DCVS+A+ E EKK CEKLLTPEAKKLLE E
Sbjct 1055 TEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLE-E 1113
Query 892 VKKSVKAYLDCVSQakteaekkaceklltpeakkkleeakksvkaYLDCVSRARNekekk 951
KKSVKAYLDCVSQAKTEAEKK CEKLLTPEAKK LEEAK S+KAY DCVSRARNEKEKK
Sbjct 1114 AKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKK 1173
Query 952 ecekLLTPEAKKLLEQQALDCLKSAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVS 1011
ECEKLLTPEAKKLLEQQALDCLK+AKTEA+KKRCVKDLPKDLQKKVLAKESVKAYLDCVS
Sbjct 1174 ECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVS 1233
Query 1012 RARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERKACEKLLTPEARKL 1071
RARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKL
Sbjct 1234 RARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKL 1293
Query 1072 LEQEVKKSVKAYLDCVSRARNekekkecekLLTPEARKFLAKQVLSCLEKARNEEERKAC 1131
LEQEVKKSVKAYLDCVS+A+ E EKKECEKLLTPEARKFLAKQVL+CLEKA NEEERKAC
Sbjct 1294 LEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKAC 1353
Query 1132 LKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAY 1191
LKN+PKDLQ NVLAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQEVKKSVKAY
Sbjct 1354 LKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAY 1413
Query 1192 LDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDG 1251
LDCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDG
Sbjct 1414 LDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDG 1473
Query 1252 LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT 1311
LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT
Sbjct 1474 LSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKT 1533
Query 1312 ERLHQASECLDNLDDPTDQEAIEKCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTF 1371
ERLHQASECLDNLDDPTDQ+AIE+CLEGLSDSERALILGIKRQADEVD IYSDLRNRKTF
Sbjct 1534 ERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTF 1593
Query 1372 DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkd 1431
DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKD
Sbjct 1594 DNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKD 1653
Query 1432 ksleaklakalggdkkdddkekskkPTAETKAESNKIDKDVAETAKNISEIALKNKKEKS 1491
K+LEAKLAKALGG+KKDDDKEKSKK+TAE+K ESNKIDKDVAETAKNISEIALKNKKEK+
Sbjct 1654 KNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKN 1713
Query 1492 GEFVDENGNPIddkkkeekqdeTSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG 1551
GEFVDENGNPIDDKKK EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG
Sbjct 1714 GEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTG 1773
Query 1552 IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL 1611
IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL
Sbjct 1774 IVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPL 1833
Query 1612 ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER 1671
ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER
Sbjct 1834 ANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSER 1893
Query 1672 TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD 1731
TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD
Sbjct 1894 TPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYD 1953
Query 1732 VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1766
VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1954 VKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 549 bits (2072), Expect = 5e-157, Method: Compositional matrix adjust.
Identities = 493/568 (87%), Positives = 523/568 (93%), Gaps = 10/568 (1%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNPTETKTNFDGEKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDNPTETKTNFDG+KSEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDSGGNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 126
QMDSGG+ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 127 EETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNF 186
EETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 187 DGEKSEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFVPLEDKSSRFS 246
D +KSEEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 247 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 306
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 307 KAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 366
+AFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 367 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelqkelqeYKDCI 426
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 427 KNAKTEAERNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADM 486
KNAKTEAE+N CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 487 SVKAYKDCVSKARNekekkecekLLTPEARKKLEQQV-------LDCLKNAKTDEERKKC 539
SVKAYKDCVS+A+NE EKKECEKLLTPEA+K LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 540 LKDLPKDLQSDI-LAKESVKAYKDCVSQ 566
K L + + + AK SVKAY DCVSQ
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 379 bits (1425), Expect = 7e-106, Method: Compositional matrix adjust.
Identities = 570/1006 (57%), Positives = 667/1006 (67%), Gaps = 208/1006 (20%)
Query 340 EAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKL 399
+ Y+DCIKNAKTE E+ CL + E + + L+QQ ALDCLKNAKTDEER+ CLK
Sbjct 682 QEYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQQ----ALDCLKNAKTDEERKKCLK- 734
Query 400 INDPEIrekfrkelelqkelqeYKDCIKNAKTEAERNKCLKGLSKEAIERLKQQA----- 454
++ ++ ++ + ++ YKDC+ +AK EAE++ C K L+ EA L ++A
Sbjct 735 ----DLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVK 790
Query 455 --LDCLKNAKTDEERNECLKNIPQDLQKELL-ADMSVKAYKDCVSKARNekekkecekLL 511
LDC+ +AKT+ E++EC K + + +K L A SVKAY DCVS+A+NE EKKECEKLL
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 512 TPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDCVSQaktea 571
TPEARK LEQ+ LDCLKNAKTDEERKKC+KDLPKDLQSD+LAKESVKAYKDCVSQAK EA
Sbjct 851 TPEARKLLEQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEA 910
Query 572 ekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeak 631
EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA+KKLEEAK
Sbjct 911 EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 632 esvkaYLDCVSQakteaekkeceklltPEAKKLLEQQA------LDCLKNAKTEAER--- 682
SVKAYLDCVSQAK E EKKECEKLLTPEAKK LE+ LDC+ +AK E E+
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 1030
Query 683 -----------------------------KRCVKDLPKDLQKKVLAKESVKAYLDCVSQa 713
KRCVKDLPKDLQKKVLAKESVKAY DCV
Sbjct 1031 EKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCV--- 1087
Query 714 kteaekkeceklltpeakklleeakeslkaYKDCVSRARNekekkecekLLTPEAKKLLE 773
SRARNEKEKKECEKLLTPEAKKLLE
Sbjct 1088 -----------------------------------SRARNEKEKKECEKLLTPEAKKLLE 1112
Query 774 QEVKRSVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCVSRARNEKE 833
E K+SVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKE
Sbjct 1113 -EAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKE 1171
Query 834 KQECEKLLTPEAKKLLEQE------------------------------VKKSVKAYLDC 863
K+ECEKLLTPEAKKLLEQ+ K SVKAYLDC
Sbjct 1172 KKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDC 1231
Query 864 VSQakteaekkacekLLTPEAKKLLEQEVKKSVKAYLDCVSQakteaekka-ceklltpe 922
VS+A+ E EKK CEKLLTPEAKKLLE E K S+KAY DC+SQA+ E E++A L
Sbjct 1232 VSRARNEKEKKECEKLLTPEAKKLLE-EAKESLKAYKDCLSQARNEEERRACEKLLTPEA 1290
Query 923 akkkleeakksvkaYLDCVSRARNekekkecekLLTPEAKKLLEQQALDCLKSAKTEAEK 982
K +E KKSVKAYLDCVS+A+ E EKKECEKLLTPEA+K+L +Q L+CL A E E+
Sbjct 1291 RKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEER 1350
Query 983 KRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNekekkeceklltpeakklleeakeslk 1042
K C+K+LPKDLQ +VLAKES+KAY DC+S+AR
Sbjct 1351 KACLKNLPKDLQENVLAKESLKAYKDCLSQAR---------------------------- 1382
Query 1043 aYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNekekkecekL 1102
NEEER+ACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKL
Sbjct 1383 ----------NEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKL 1432
Query 1103 LTPEARKFLAKQ-------VLSCLEKARNEEERKA---CLKNIPKDLQKNVLAKESLKAY 1152
LTPEARKFLAK+ + CL K + ++R A CL ++ + + + L KA
Sbjct 1433 LTPEARKFLAKELQQKDKAIKDCL-KNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAV 1491
Query 1153 KDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLT 1212
DCL AR +EE++ C++L + L QE++ ++ + K++Q L+
Sbjct 1492 LDCLKTARTDEEKRKCQNLYSD-----LIQEIQ----------NKRTQSKQNQ-----LS 1531
Query 1213 PEARKFLAKELQQKDKAIKDCLKN-ADPNDRAAIMKCLDGLSDEEK 1257
R L+Q +CL N DP D+ AI +CL+GLSD E+
Sbjct 1532 KTER------LHQ----ASECLDNLDDPTDQQAIEQCLEGLSDSER 1567
Score = 183 bits (680), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 174/196 (89%), Positives = 182/196 (93%), Gaps = 2/196 (1%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNPTETKTNFDG 60
MNEENDKLETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSDHHL+NPTETKTNFDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 EKSEETQTQMDSGGNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 118
+KSEETQTQMDSGG+ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 119 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDN 178
DQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 179 STETKTNFDGEKSEEI 194
+TETKTNFDG+KSEE
Sbjct 181 PTETKTNFDGDKSEET 196
Score = 168 bits (620), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 165/188 (88%), Positives = 172/188 (92%), Gaps = 2/188 (1%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNPTETKTNFDGEKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDNPTETKTNFDG+KSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDSGGNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 126
QMDSGG+ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 127 EETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNF 186
EETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 187 DGEKSEEI 194
DG+KSEE
Sbjct 319 DGDKSEET 326
Score = 44.2 bits (148), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/225 (33%), Positives = 121/225 (54%), Gaps = 37/225 (16%)
Query 341 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 397
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E++EC
Sbjct 1373 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKKECE 1430
Query 398 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTE--AERNKCLKGLSKEAIERLK---- 451
KL+ PE R + KEL+ + KDC+KNA + A KCL GLS E E+LK
Sbjct 1431 KLLT-PEARKFLAKELQQKDKAI--KDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQE 1485
Query 452 ---QQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkece 508
+ LDCLK A+TDEE+ C Q+L +L+ ++ K +++++++
Sbjct 1486 AREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNKR-----TQSKQNQ------ 1529
Query 509 kLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 553
L+ R + LD L ++ ++ +CL +L+ ++ IL+
Sbjct 1530 --LSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILG 1572 |
21) HPSAT_04140 in NC_017359
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1369 bits (5196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1185/1414 (84%), Positives = 1242/1414 (88%), Gaps = 95/1414 (6%)
Query 394 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 451
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 452 QQ----ALDCLKNAKTDEERKKCLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 502
QQ ALDCLKNAKTDEERK CLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 503 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 562
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 563 CVSQARTEAEKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 622
CVSQA+ EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 623 akkkleeakksvkaYLDCVSQakteaekkeceklltPEARKLLEQQALDCLKNAKTEAEK 682
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEARKLLEQ+ALDCLKNAKT+ E+
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 683 KRCVKDLPKDLQKKVLAKESVKAYLDCVSQakteaekke-ceklltpeakklleeakesl 741
K+CVKDLPKDLQ VLAKESVKAY DCVSQAK EAEKKE L K L EEAKES+
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 742 kaYKDCVSRARNekekkecekLLTPEAKKLLEQQA------LDCLKNAKTEAEKKRCVKD 795
KAY DCVS+A+ E EKKECEKLLTPEA+K LE+ LDC+ +AK E EKK C K
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKL 995
Query 796 L-PKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEE----------- 843
L P +K AK SVKAYLDCVSQAK E EKKECEKLLTPEA+KLLE+
Sbjct 996 LTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAKT 1055
Query 844 --------------------AKESLKAYKDCVSRARNekekkecekLLTPEAKKLLEQEV 883
AKES+KAYKDCVSRARNEKEKKECEKLLTPEAKKLLE E
Sbjct 1056 EADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLE-EA 1114
Query 884 KKSVKAYLDCVSQakteaekkeceklltPEARK--------------------------- 916
KKSVKAYLDCVSQAKTEAEKKECEKLLTPEA+K
Sbjct 1115 KKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKE 1174
Query 917 -----------FLAKQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 965
+L +QALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESVKAYLDCVSR
Sbjct 1175 CEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSR 1234
Query 966 ARNekekkecekLLTPEARKLLEEAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLL 1025
ARNEKEKKECEKLLTPEA+KLLEEAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLL
Sbjct 1235 ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLL 1294
Query 1026 EQEVKKSVKAYLDCVSQakteaekkeceklltPEARKFLAKQALSCLEKARNEEERKACL 1085
EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ L+CLEKA NEEERKACL
Sbjct 1295 EQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACL 1354
Query 1086 KNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAYL 1145
KN+PKDLQ NVLAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQEVKKSVKAYL
Sbjct 1355 KNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYL 1414
Query 1146 DCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1205
DCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL
Sbjct 1415 DCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGL 1474
Query 1206 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1265
SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE
Sbjct 1475 SDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTE 1534
Query 1266 RLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFD 1325
RLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSDLRNRKTFD
Sbjct 1535 RLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFD 1594
Query 1326 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdk 1385
NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK
Sbjct 1595 NMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK 1654
Query 1386 nleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIALKNKKEKSG 1445
NLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIALKNKKEK+G
Sbjct 1655 NLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNG 1714
Query 1446 EFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1505
EFVDENGNPIDDKKK+EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI
Sbjct 1715 EFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGI 1774
Query 1506 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1565
VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA
Sbjct 1775 VSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLA 1834
Query 1566 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1625
NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT
Sbjct 1835 NAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERT 1894
Query 1626 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1685
PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV
Sbjct 1895 PEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDV 1954
Query 1686 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1719
KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1955 KITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 563 bits (2126), Expect = 3e-161, Method: Compositional matrix adjust.
Identities = 502/578 (87%), Positives = 532/578 (93%), Gaps = 10/578 (1%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDNSTETKTNFDGEKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SD LDN+TETKTNFDG+KSEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 126
QMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 127 EEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDNSTETKTNF 186
EE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SD LDN+TETKTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 187 DGEKSEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFIPLEDKSSRFS 246
D +KSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 247 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 306
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 307 RAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 366
RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 367 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelqkelqeYKDCI 426
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 427 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKNIPQDLQKELLADM 486
KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 487 SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTDEERKKC 539
SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 540 LKDLPKDLQSDI-LAKESVKAYKDCVSQARTEAEKKEC 576
K L + + + AK SVKAY DCVSQA+ E EKKEC
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 846
Score = 447 bits (1685), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 572/957 (60%), Positives = 677/957 (71%), Gaps = 157/957 (16%)
Query 340 EAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKL 399
+ Y+DCIKNAKTE E+ CL + E + + L+QQ ALDCLKNAKTDEER+ CLK
Sbjct 682 QEYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQQ----ALDCLKNAKTDEERKKCLK- 734
Query 400 INDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA----- 454
++ ++ ++ + ++ YKDC+ +AK EAEK+EC K L+ EA L ++A
Sbjct 735 ----DLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVK 790
Query 455 --LDCLKNAKTDEERKKCLKNIPQDLQKELL-ADMSVKAYKDCVSKARNekekkecekLL 511
LDC+ +AKT+ E+K C K + + +K L A SVKAY DCVS+A+NE EKKECEKLL
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 512 TPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDCVSQARTEA 571
TPEA+K LEQ+ LDCLKNAKTDEERKKC+KDLPKDLQSD+LAKESVKAYKDCVSQA+ EA
Sbjct 851 TPEARKLLEQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEA 910
Query 572 EKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeak 631
EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA+KKLEEAK
Sbjct 911 EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 632 ksvkaYLDCVSQakteaekkeceklltPEARKLLEQQA------LDCLKNAKTEAEK--- 682
KSVKAYLDCVSQAK E EKKECEKLLTPEA+K LE+ LDC+ +AK E EK
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 1030
Query 683 -----------------------------KRCVKDLPKDLQKKVLAKESVKAYLDCVSQa 713
KRCVKDLPKDLQKKVLAKESVKAY DCVS+A
Sbjct 1031 EKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRA 1090
Query 714 kteaekkeceklltpeakklleeakeslkaYKDCVSRARNekekkecekLLTP------- 766
+ E EKKECEKLLTPEAKKLLEEAK S+KAY DCVS+A+ E EKKECEKLLTP
Sbjct 1091 RNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE 1150
Query 767 -------------------------------EAKKLLEQQALDCLKNAKTEAEKKRCVKD 795
EAKKLLEQQALDCLKNAKTEA+KKRCVKD
Sbjct 1151 EAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKD 1210
Query 796 LPKDLQKKVLAKESVKAYLDCVSQakteaekkeceklltPEARKLLEEAKESLKAYKDCV 855
LPKDLQKKVLAKESVKAYLDCVS+A+ E EKKECEKLLTPEA+KLLEEAKESLKAYKDC+
Sbjct 1211 LPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCL 1270
Query 856 SRARNekekkecekLLTPEAKKLLEQEVKKSVKAYLDCVSQakteaekkeceklltPEAR 915
S+ARNE E++ CEKLLTPEA+KLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAR
Sbjct 1271 SQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAR 1330
Query 916 KFLAKQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNekekkec 975
KFLAKQ L+CL +A E E+K C+K+LPKDLQ +VLAKES+KAY DC+S+ARNE E++ C
Sbjct 1331 KFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRAC 1390
Query 976 ekLLTPEARKLLE-EAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVK 1034
EKLLTPEARKLLE E K S+KAY DC+S+ARNE E+K CEKLLTPEARK+L +E+++ K
Sbjct 1391 EKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDK 1450
Query 1035 AYLDCVSQakteaekkeceklltPEARKFLAKQALSCLEKARNEEERKACLKNIPKDLQK 1094
A DC+ + P+ R + + CL+ +EE LK + +K
Sbjct 1451 AIKDCLKN-------------ADPNDRAAI----MKCLDGLSDEEK----LKYLQEAREK 1489
Query 1095 NVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNE 1154
VL DCL AR +EE++ C++L + L QE++ ++ +
Sbjct 1490 AVL---------DCLKTARTDEEKRKCQNLYSD-----LIQEIQ----------NKRTQS 1525
Query 1155 KEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKN-ADPNDRAAIMKCLDGLSDEEK 1210
K++Q L+ R L+Q +CL N DP D+ AI +CL+GLSD E+
Sbjct 1526 KQNQ-----LSKTER------LHQ----ASECLDNLDDPTDQQAIEQCLEGLSDSER 1567
Score = 178 bits (661), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 169/199 (85%), Positives = 182/199 (92%), Gaps = 2/199 (1%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDNSTETKTNFDG 60
MNEENDKLETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SDHHL+N+TETKTNFDG
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 EKSEETQTQMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 118
+KSEETQTQMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 119 dqennGYQEEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDN 178
DQENNGYQEE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 179 STETKTNFDGEKSEEITND 197
+TETKTNFDG+KSEE +
Sbjct 181 PTETKTNFDGDKSEETQTQ 199
Score = 163 bits (602), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 160/191 (84%), Positives = 172/191 (91%), Gaps = 2/191 (1%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDNSTETKTNFDGEKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SD LDN+TETKTNFDG+KSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDSGDNETSESSN--LADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 126
QMDSG++ETSESSN LADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 127 EEIQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskensdHHLDNSTETKTNF 186
EE Q +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKE+SD LDN+TETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 187 DGEKSEEITND 197
DG+KSEE +
Sbjct 319 DGDKSEETQTQ 329 |
22) HPV225_0522 in NC_017355
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1359 bits (5158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1221/1423 (86%), Positives = 1286/1423 (91%), Gaps = 66/1423 (4%)
Query 396 NECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIER--LK 453
+ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ KCL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 454 QQ----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 504
QQ ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 505 ekkecekLLTPEAKKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 564
EK+EC K L+ EA L QQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 565 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 624
CVSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 625 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLEQQALDCLKNAKTDEER 684
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLEQ+ALDCLKNAKTDEER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 685 KKCLKNLPKDLQKKVLAKESVKA------------------------------------- 707
KKC+K+LPKDLQ VLAKESVKA
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 708 --YLDCVSRARNekekkeceklltpeakklleeakeslkaYKDCVSRSRNEKEKQECekl 765
YLDCVS+A+ E EKKECEKLLTPEA+K LEEAK S+KAY DCVS+++NE EK+ECEKL
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKL 995
Query 766 ltpeakklleeeakeSVKAYLDCVSQARTEAEKKECeklltpeakkkleeakksvkaYLD 825
LTPEAKK LEE K SVKAYLDCVSQA+ E EKKECEKLLTPEAKK LE+ LD
Sbjct 996 LTPEAKKKLEEAKK-SVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQA------LD 1048
Query 826 CVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSRARNekekkeceklltpe 885
C+ +AKTEA+KK C K L + +K + SVKAY DCVSRARNEKEKKECEKLLTPE
Sbjct 1049 CLKNAKTEADKKRCVKDLPKDLQKKVLAKE--SVKAYKDCVSRARNEKEKKECEKLLTPE 1106
Query 886 akkkleeakksvkaYLDCVSQARTEAEKKECEKLLTPEARKLLEQEVKKSVKAYLDCVSR 945
AKK LEEAKKSVKAYLDCVSQA+TEAEKKECEKLLTPEA+KLLE E K S+KAY DCVSR
Sbjct 1107 AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE-EAKESLKAYKDCVSR 1165
Query 946 ARNekekkecekLLTPEAKKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESV 1005
ARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKESV
Sbjct 1166 ARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESV 1225
Query 1006 KAYLDCVSRARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERKACEKL 1065
KAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEER+ACEKL
Sbjct 1226 KAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKL 1285
Query 1066 LTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLSCLEKAR 1125
LTPEARKLLEQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA
Sbjct 1286 LTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAG 1345
Query 1126 NEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKLLTPEARKLLEQE 1185
NEEERKACLKN+PKDLQ NVLAKESLKAYKDCLSQARNEEER+ACEKLLTPEARKLLEQE
Sbjct 1346 NEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQE 1405
Query 1186 VKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA 1245
VKKSVKAYLDCVSRARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA
Sbjct 1406 VKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRA 1465
Query 1246 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS 1305
AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS
Sbjct 1466 AIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQS 1525
Query 1306 KQNQLSKTERLHQASECLDNLDDPTDQEAIEKCLEGLSDSERALILGIKRQADEVDLIYS 1365
KQNQLSKTERLHQASECLDNLDDPTDQ+AIE+CLEGLSDSERALILGIKRQADEVD IYS
Sbjct 1526 KQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYS 1585
Query 1366 DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDTDKIASDNPIYASIEPDITKQY 1425
DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVD+DKIASDNPIYASIEPDITKQY
Sbjct 1586 DLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQY 1645
Query 1426 ETEKTIkdknleaklakalggnkkdddkekskksTAEARVESNKIDKDVAETAKNISEIA 1485
ETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEA+VESNKIDKDVAETAKNISEIA
Sbjct 1646 ETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIA 1705
Query 1486 LKNKKEKSGEFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1545
LKNKKEK+GEFVDENGNPIDDKKK+EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS
Sbjct 1706 LKNKKEKNGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTS 1765
Query 1546 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1605
KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT
Sbjct 1766 KVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAIT 1825
Query 1606 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1665
PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG
Sbjct 1826 PDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIG 1885
Query 1666 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1725
LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD
Sbjct 1886 LGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDD 1945
Query 1726 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1768
IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1946 IDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 537 bits (2026), Expect = 2e-153, Method: Compositional matrix adjust.
Identities = 497/568 (88%), Positives = 525/568 (93%), Gaps = 8/568 (1%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNFDEYKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNFD KSEETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 69 QMDsggnetsessnssLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSN+SLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNF
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 448
Query 189 DGEKSEEITNNSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFIPLEDKSSRFS 248
D +KSEEITN+SNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYF+PLEDKSSRFS
Sbjct 449 DEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFS 508
Query 249 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 308
KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL
Sbjct 509 KDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPL 568
Query 309 RAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERIKCLDLIKDEN 368
RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN
Sbjct 569 RAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDEN 628
Query 369 LKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIrekfrkelelqkelqeYKDCI 428
LKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKELELQKELQEYKDCI
Sbjct 629 LKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCI 688
Query 429 KNAKTEAEKNKCLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADM 488
KNAKTEAEKN CLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK++P+DLQ ++LA
Sbjct 689 KNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKE 748
Query 489 SVKAYKDCVSKARNekekkecekLLTPEAKKLLEQQA-------LDCLKNAKTDEERKKC 541
SVKAYKDCVS+A+NE EKKECEKLLTPEAKKLLE++A LDC+ +AKT+ E+K C
Sbjct 749 SVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKEC 808
Query 542 LKDLPKDLQSDI-LAKESVKAYKDCVSQ 568
K L + + + AK SVKAY DCVSQ
Sbjct 809 EKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 209 bits (778), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 200/481 (42%), Positives = 282/481 (59%), Gaps = 104/481 (21%)
Query 900 YLDCVSQARTEAEKKECEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNekekkecekLL 959
+ +C+S++ ++ EC KL+ K L++++KK++ AY DC+ A+ E E+ C L+
Sbjct 571 FYECISNG---GNYEECLKLIKD---KKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLI 624
Query 960 TPEA--KKLLEQQ----ALDCLKNAKTEAEKKRCVK-----DLPKDLQKKVLAKESVKAY 1008
E K LL+QQ ALDCLKNAKT+ E+K C+K ++ ++K + + ++ Y
Sbjct 625 KDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEY 684
Query 1009 LDCVSRARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERKAC------ 1062
DC+ A+ E EK+EC K L+ EA L + DCL +A+ +EERK C
Sbjct 685 KDCIKNAKTEAEKNECLKGLSKEAIERLKQQAL------DCLKNAKTDEERKKCLKDLPK 738
Query 1063 -------------------------------EKLLTPEARKLLEQEVK------------ 1079
EKLLTPEA+KLLE+E K
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 1080 --------------------------KSVKAYLDCVSRARNEKEKQECEKLLTPEARKFL 1113
KSVKAYLDCVS+A+NE EK+ECEKLLTPEARK+L
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLL 858
Query 1114 AKQVLSCLEKARNEEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERKACEKL 1173
++ L CL +A+ +EERK C+K++PKDLQ +VLAKES+KAYKDC+SQA+NE E+K CEKL
Sbjct 859 EQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKL 918
Query 1174 LTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIK 1233
LTPEA+KLLE+E K SVKAYLDCVS+A+ E EK+ECEKLLTPEAR K L++ K++K
Sbjct 919 LTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAR----KKLEEAKKSVK 974
Query 1234 DCLK-NADPNDRAAIMKCLDGLSDEEKLKYLQEARE-KAVLDCLKTARTDEEKRKCQNLY 1291
L +++++ C L+ E K K + + KA LDC+ A+ ++EK+ C++L
Sbjct 975 AYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 1034
Query 1292 S 1292
+
Sbjct 1035 T 1035
Score = 166 bits (615), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 173/196 (89%), Positives = 182/196 (93%), Gaps = 0/196 (0%)
Query 1 MNEENDKLETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNFDE 60
MNEENDKLETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSDHHL+N+TETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YKSEETQTQMDsggnetsessnssLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneed 120
KSEETQTQMDSGG+ETSESSN+SLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 dqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDN 180
DQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 STETKTNFDGEKSEEI 196
+TETKTNFDG+KSEE
Sbjct 181 PTETKTNFDGDKSEET 196
Score = 151 bits (555), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 164/188 (88%), Positives = 172/188 (92%), Gaps = 0/188 (0%)
Query 9 ETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNFDEYKSEETQT 68
ETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNFD KSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsggnetsessnssLADKLFKKARKLVDNKRPFTQQKNLdeeiqepneeddqennGYQ 128
QMDSGG+ETSESSN+SLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEEDDQENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEETIKANHFedsskeskessdHHLDNSTETKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEE+ NHFEDSSKESKESSD LDN+TETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DGEKSEEI 196
DG+KSEE
Sbjct 319 DGDKSEET 326
Score = 142 bits (524), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/276 (52%), Positives = 182/276 (66%), Gaps = 18/276 (6%)
Query 343 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 399
AY+DC+ +AK E E+ C L+ E K LL+++ V+ LDC+ +AKT+ E++EC
Sbjct 752 AYKDCVSQAKNEAEKKECEKLLTPEA--KKLLEEEAKESVKAYLDCVSQAKTEAEKKECE 809
Query 400 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNKCLKGLSKEAIERLKQQALDC 459
KL+ PE R K+ K Y DC+ +AK E EK+ C K L+ EA L Q+ALDC
Sbjct 810 KLLT-PEARKKLEEAKKSVKA---YLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDC 865
Query 460 LKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKK 519
LKNAKTDEER+ C+K++P+DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEAKK
Sbjct 866 LKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKK 925
Query 520 LLEQQA-------LDCLKNAKTDEERKKCLKDLPKDLQSDI-LAKESVKAYKDCVSQakt 571
LLE++A LDC+ +AKT+ E+K C K L + + + AK SVKAY DCVSQ
Sbjct 926 LLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ-AK 984
Query 572 eaekkeceklltpeakklleeeakeSVKAYLDCVSQ 607
+ + K L K EEAK SVKAYLDCVSQ
Sbjct 985 NEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQ 1020 |
23) HPELS_03975 in NC_017063
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1354 bits (5137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1143/1413 (81%), Positives = 1225/1413 (87%), Gaps = 91/1413 (6%)
Query 528 ECLKLINDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQ 585
ECLKLI+D ++++ +K LE Y+DCIKNAKTE E+ CL + E + + L+Q
Sbjct 583 ECLKLIKDKKLQDQMKKTLEA------YNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQ 636
Query 586 Q----ALDCLKNAKTDEERNECLK-----NIPQDLQKELLADMSVKAYKDCVSRARNeke 636
Q ALDCLKNAKTDEER+ECLK +I + ++KEL + ++ YKDC+ A+ E E
Sbjct 637 QKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAE 696
Query 637 kkecekLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDC 696
K+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDC
Sbjct 697 KNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDC 756
Query 697 VSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSkakneaekkeceklltpea 756
VSQAK EAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVS+AK EAEKKECEKLLTPEA
Sbjct 757 VSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA 816
Query 757 kkkleeakksvkaYLDCVSQAKTEAEKQECEKLLTPEAKKLLEQQALDCLKNAKTEAEKK 816
+KKLEEAKKSVKAYLDCVSQAK E EK+ECEKLLTPEA+KLLEQ+ALDCLKNAKT+ E+K
Sbjct 817 RKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEERK 876
Query 817 RCVKDLPKDLQKKVLAKESVRVYLDCVSQAKTEAERKECEKLLTPEARKLLEE-AKKSVK 875
+CVKDLPKDLQ VLAKESV+ Y DCVSQAK EAE+KECEKLLTPEA+KLLEE AK SVK
Sbjct 877 KCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVK 936
Query 876 AYKDCVSRARNekekkecekLLTPEARKLLEEAKKSVKAYLDCVSQakteaekkecekll 935
AY DCVS+A+ E EKKECEKLLTPEARK LEEAKKSVKAYLDCVSQAK E EKKECEKLL
Sbjct 937 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 996
Query 936 tPEARKLLEEAKKSVKLFGLRISGKLSGKKRREIDS--RPEARKLLENQALDCLKNAKTE 993
TPEA+K LEEAKKSVK + +S + ++E + PEA+KLLE+QALDCLKNAKTE
Sbjct 997 TPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAKTE 1056
Query 994 AEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSkakteaekkeceklltPEARKLLEEAKE 1053
A+KKRCVKDLPKDLQKKVLAKESV+ Y DCVS+A+ E EKKECEKLLTPEA+KLLEEAK
Sbjct 1057 ADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKK 1116
Query 1054 SVKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNekekkec 1113
SVKAY DCVS+A+ E EK+ECEKLLTPEAKKLLE E K S+KAY DCVSRARNEKEKKEC
Sbjct 1117 SVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE-EAKESLKAYKDCVSRARNEKEKKEC 1175
Query 1114 ekLLTPEARKFLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKES----------- 1162
EKLLTPEA+K+LE+QALDCLKNAKTEA+KKRCVKDLPKDLQKKVLAKES
Sbjct 1176 EKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRA 1235
Query 1163 ---------------------------VKAYLDCVSRARNekekke-ceklltpeakkll 1194
+KAY DC+S+ARNE E++ L K L
Sbjct 1236 RNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLE 1295
Query 1195 eeakesvkaYLDCVSRARNekekkecekLLTPEARKLLEE-------------------- 1234
+E K SVKAYLDCVS+A+ E EKKECEKLLTPEARK+L
Sbjct 1296 QEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLK 1355
Query 1235 -----------AKESLKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSVKAYLD 1283
AKESLKAYKDCLSQARNE ERRACEKLLTPEARKLLEQEVKKSVKAYLD
Sbjct 1356 NLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLD 1415
Query 1284 CVSRARNEKEKQECEKLLTPEARKFLEKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLS 1343
CVSRARNEKEK+ECEKLLTPEARKFL KELQQKDKAIKDCLKNADPNDRAAIMKCLDGLS
Sbjct 1416 CVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLS 1475
Query 1344 DEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIqnkkaqnkqnqLSKTER 1403
DEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNK++Q+KQNQLSKTER
Sbjct 1476 DEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTER 1535
Query 1404 LHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRSRKTFDN 1463
LHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVDRIYSDLR+RKTFDN
Sbjct 1536 LHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFDN 1595
Query 1464 MAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdks 1523
MAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK+
Sbjct 1596 MAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKN 1655
Query 1524 leaklakalggdkkdddkekskkPTTETKAESNKIDKDVAETAKNISEIALKNKKEKSGD 1583
LEAKLAKALGG+KKDDDKEKSKK+T+E+K ESNKIDKDVAETAKNISEIALKNKKEK+G+
Sbjct 1656 LEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNGE 1715
Query 1584 FVDENGNPIddkkkeekqdeTSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIV 1643
FVDENGNPIDDKKK EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIV
Sbjct 1716 FVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIV 1775
Query 1644 SGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLAN 1703
SGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLAN
Sbjct 1776 SGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLAN 1835
Query 1704 AQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTP 1763
AQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTP
Sbjct 1836 AQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTP 1895
Query 1764 EFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVK 1823
EFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVK
Sbjct 1896 EFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVK 1955
Query 1824 ITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1856
ITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1956 ITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 673 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/703 (86%), Positives = 641/703 (92%), Gaps = 17/703 (2%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFEDPLKEESSDNH--LDNSTETKTQETKTHFDEDKL 66
ETSKK+QQ+SPQDLSNEEATE NHFED+ KE ++ LDN+TETKT +FD DK
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKT-----NFDGDKS 193
Query 67 EETQTQMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLNKEDDQE 126
EETQTQMDSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+Q LN EDDQE
Sbjct 194 EETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQE 253
Query 127 NNGYQEETQTDLIDDETSKKAQQDSPQDLSNEEATEANHFEDLLKESKESSDNHLDNPTE 186
NNGYQEETQT+LIDDETSKK+QQ+SPQDLSNEEATE NHFED KESKESSD LDNPTE
Sbjct 254 NNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTE 313
Query 187 TKTHFDKDKLEETQTQIDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEA 246
TKT+FD DK EETQTQ+DSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+
Sbjct 314 TKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEET 373
Query 247 QKLNKEDDQENNGYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEVNHFEDSLKEESSD 306
Q LN EDDQENNGYQEETQT+LIDDETSKKTQQHSPQDLSNEEATE+NHFEDS KE
Sbjct 374 QELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKES 433
Query 307 NH--LDNPTETKTNFDGDKSEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSI 364
++ LDNPTETKTNFD DKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSI
Sbjct 434 SDPYLDNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSI 493
Query 365 FHYFVPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTL 424
FHYF+PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTL
Sbjct 494 FHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTL 553
Query 425 YNYLNIAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKT 484
YNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKT
Sbjct 554 YNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKT 613
Query 485 EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIrekfrk 544
EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRK
Sbjct 614 EEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRK 673
Query 545 elelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECL 604
ELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEER+ CL
Sbjct 674 ELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCL 733
Query 605 KNIPQDLQKELLADMSVKAYKDCVSRARNekekkecekLLTPEARKKLEQQV-------L 657
K++P+DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEA+K LE++ L
Sbjct 734 KDLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYL 793
Query 658 DCLKNAKTDEERKKCLKDLPKDLQSDI-LAKESVKAYKDCVSQ 699
DC+ +AKT+ E+K C K L + + + AK SVKAY DCVSQ
Sbjct 794 DCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQ 836
Score = 298 bits (1117), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 273/331 (83%), Positives = 297/331 (90%), Gaps = 9/331 (2%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFEDPLKEESSD--NHLDNSTETKTQETK 58
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFED+ KE +HL+N+TETKT
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKT---- 56
Query 59 THFDEDKLEETQTQMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQK 118
+FD DK EETQTQMDSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+Q
Sbjct 57 -NFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQE 115
Query 119 LNKEDDQENNGYQEETQTDLIDDETSKKAQQDSPQDLSNEEATEANHFEDLLKESKESSD 178
LN EDDQENNGYQEETQT+LIDDETSKK+QQ+SPQDLSNEEATE NHFED KESKESSD
Sbjct 116 LNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSD 175
Query 179 NHLDNPTETKTHFDKDKLEETQTQIDsggnetsessngsLADKLFKKARKLVDDKRPFTQ 238
LDNPTETKT+FD DK EETQTQ+DSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQ
Sbjct 176 PYLDNPTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQ 235
Query 239 QKSLDEEAQKLNKEDDQENNGYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEVNHFED 298
QK+LDEE+Q LN EDDQENNGYQEETQT+LIDDETSKKTQQHSPQDLSNEEATE+NHFED
Sbjct 236 QKNLDEETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFED 295
Query 299 SLKEESSDNH--LDNPTETKTNFDGDKSEEI 327
S KE ++ LDNPTETKTNFDGDKSEE
Sbjct 296 SSKESKESSDPYLDNPTETKTNFDGDKSEET 326
Score = 253 bits (945), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 291/634 (46%), Positives = 397/634 (63%), Gaps = 95/634 (14%)
Query 432 EIEDKNPLRAFYECISNG---GNYEEClk--likdkklqdqmkktlEAYNDCIKNAKTEE 486
E E K++++A+ +C+S++ ++ EC K +K ++ KK++ AY DC+ +AK E+
Sbjct 928 EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNED 987
Query 487 ERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIrekfrkel 546
E+ C L+ E KK ++ V+ LDC+ +AK ++E+KEC KL+ PE + + ++
Sbjct 988 EKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLT-PEAKKLLEQQA 1046
Query 547 elqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIER-LKQQAL----DCLKNAKT----- 596
DC+KNAKTEA+K+ C+K+L+K+ + L ++++ DC+ A+
Sbjct 1047 L---------DCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKK 1097
Query 597 --------------DEERN------ECLKNIPQDLQ------------KELLADM--SVK 622
+E ++ +C+ + + + K LL + S+K
Sbjct 1098 ECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLK 1157
Query 623 AYKDCVSRARNekekkecekLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQS 682
AYKDCVSRARNEKEKKECEKLLTPEA+K LEQQ LDCLKNAKT+ ++K+C+KDLPKDLQ
Sbjct 1158 AYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1217
Query 683 DILAKESVKAYKDCVSQakteaekkeceklltpeakklleeeakeSVKAYLDCVSkakne 742
+LAKESVKAY DCVS+ + K L K L EEAKES+KAY DC+S+A+NE
Sbjct 1218 KVLAKESVKAYLDCVSR-ARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNE 1276
Query 743 aekke-ceklltpeakkkleeakksvkaYLDCVSQAKTEAEKQECEKLLTPEAKKLLEQQ 801
E++ L K +E KKSVKAYLDCVSQAKTEAEK+ECEKLLTPEA+K+L +Q
Sbjct 1277 EERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQ 1336
Query 802 ALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSQAKTEAERKECEKLLTP 861
L+CL +A E E+K C+K+LPKDLQ +VLAKES++ Y DC+SQA+ E ER+ CEKLLTP
Sbjct 1337 VLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTP 1396
Query 862 EARKLLE-EAKKSVKAYKDCVSRARNekekkecekLLTPEARKLLE-EAKKSVKAYLDCV 919
EARKLLE E KKSVKAY DCVSRARNEKEKKECEKLLTPEARK+L E ++ KA DC+
Sbjct 1397 EARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCL 1456
Query 920 SQakteaekkeceklltPEARKLLEEAKKSVKLFGLRISGKLSGKKRREIDSRPEARKLL 979
+ P+ R K + GL KL EAR
Sbjct 1457 KN-------------ADPNDR---AAIMKCLD--GLSDEEKLK--------YLQEAR--- 1487
Query 980 ENQALDCLKNAKTEAEKKRCVK---DLPKDLQKK 1010
E+ LDCLK A+T+ EK++C + DL +++Q+K
Sbjct 1488 EKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNK 1521
Score = 103 bits (375), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/241 (44%), Positives = 151/241 (63%), Gaps = 26/241 (10%)
Query 474 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLI 533
AY DC+ +AKTE E+ C L+ E KK ++ V+ LDC+ +AK ++E+KEC KL+
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 534 NDPEIrekfrkelelqkelqeYKDCIKNAKTEAEKNECLKGLSKE-AIERLKQQAL---- 588
PE R + ++ DC+KNAKT+ E++ C+K+L+K+ + L ++++
Sbjct 851 T-PEARKLLEQHAL---------DCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYK 900
Query 589 DCLKNAKTDEERNECLKNIPQDLQKELLAD---MSVKAYKDCVSRARNekekkecekLLT 645
DC+ +AK + E++EC K + + K LL + SVKAY DCVS+A+ E EKKECEKLLT
Sbjct 901 DCVSQAKNEAEKKECEKLLTPE-AKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLT 959
Query 646 PEARKKLEQQV------LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESVKAYKDCVS 698
PEARKKLE+ LDC+ +AK ++E+K C K L P + AK SVKAY DCVS
Sbjct 960 PEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVS 1019
Query 699 Q 699
Q
Sbjct 1020 Q 1020
Score = 43.7 bits (146), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 74/225 (33%), Positives = 120/225 (54%), Gaps = 37/225 (16%)
Query 474 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERKECL 530
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ A+ + E+KEC
Sbjct 1373 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSRARNEKEKKECE 1430
Query 531 KLINDPEIrekfrkelelqkelqeYKDCIKNAKTE--AEKNECLKGLSKEAIERLK---- 584
KL+ PE R + KEL+ + KDC+KNA + A CL GLS E E+LK
Sbjct 1431 KLLT-PEARKFLAKELQQKDKAI--KDCLKNADPNDRAAIMKCLDGLSDE--EKLKYLQE 1485
Query 585 ---QQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSRARNekekkece 641
+ LDCLK A+TDEE+ C Q+L +L+ ++ K R+++ +++
Sbjct 1486 AREKAVLDCLKTARTDEEKRKC-----QNLYSDLIQEIQNK-------RTQSKQNQ---- 1529
Query 642 kLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILA 686
L+ R + LD L ++ ++ +CL +L+ ++ IL+
Sbjct 1530 --LSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILG 1572 |
24) cag7 in NC_020509
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1344 bits (5100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1211/1422 (86%), Positives = 1283/1422 (91%), Gaps = 65/1422 (4%)
Query 526 NECLKLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER--LK 583
+ECLKLI+D ++++ ++K L+ Y+DCIKNAKTE E+ CL + E + + L+
Sbjct 582 EECLKLIKDKKLQDQ------MKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLN 635
Query 584 QQ----ALDCLKNAKTDEERKECLK-----NIPQDLQKELLADMSVKAYKDCVSKARNek 634
QQ ALDCLKNAKTDEERKECLK +I + ++KEL + ++ YKDC+ +A+ E
Sbjct 636 QQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKNAKTEA 695
Query 635 ekkecekLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKD 694
EK+EC K L+ EA +L QQ LDCLKNAKTDEERKKCLKDLPKDLQSDILAKES+KAYKD
Sbjct 696 EKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKD 755
Query 695 CVSQAKTEDEKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 754
CVSQAK E EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE
Sbjct 756 CVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPE 815
Query 755 akkkleeakksvkaYLDCVSQakteaekkeceklltPEAKKLLERQALDCLKNAKTDEER 814
A+KKLEEAKKSVKAYLDCVSQAK E EKKECEKLLTPEA+KLLE++ALDCLKNAKTDEER
Sbjct 816 ARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEER 875
Query 815 KKCLKDLPKDLQKKVLAKESVKA------------------------------------- 837
KKC+KDLPKDLQ VLAKESVKA
Sbjct 876 KKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESV 935
Query 838 --YLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKL 895
YLDCVSQAKTEAEKKECEKLLTPEA+K LEEAK S+KAY DC+SQA+NE+E++ CEKL
Sbjct 936 KAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKL 995
Query 896 LTPEAKKLLEQEVKKSVKAYLDCISKARNEREKQECeklltpeakklleeakeslkaYKD 955
LTPEAKK +E KKSVKAYLDC+S+A+NE EK+ECEKLLTPEAKKLLE+ D
Sbjct 996 LTPEAKKK-LEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQAL------D 1048
Query 956 CVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpe 1015
C+ A+ E +KK C K L + +K + SVKAY DCVS+A+ E EKKECEKLLTPE
Sbjct 1049 CLKNAKTEADKKRCVKDLPKDLQKKVLAKE--SVKAYKDCVSRARNEKEKKECEKLLTPE 1106
Query 1016 akklleeakksvkaYLDCVSQakteaekkeceklltpeakklleeakksvkaYLDCVSQa 1075
AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAK S+KAY DCVS+A
Sbjct 1107 AKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRA 1166
Query 1076 kteaekkeceklltPEAKKLLEQQALDCLKNAKTEAEKKRCVKDIPKDLQKKVLAKESVK 1135
+ E EKKECEKLLTPEAKKLLEQQALDCLKNAKTEA+KKRCVKD+PKDLQKKVLAKESVK
Sbjct 1167 RNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVK 1226
Query 1136 AYLDCVSRARNekekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLL 1195
AYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLL
Sbjct 1227 AYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLL 1286
Query 1196 TPEAKKLLEQEVKKSVKAYLDCVSKARNEREKQECEKLLTPEARKFLAKQVLSCLEKARN 1255
TPEA+KLLEQEVKKSVKAYLDCVS+A+ E EK+ECEKLLTPEARKFLAKQVL+CLEKA N
Sbjct 1287 TPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGN 1346
Query 1256 EEERKACLKNIPKDLQKNVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEV 1315
EEERKACLKN+PKDLQ NVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEV
Sbjct 1347 EEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEV 1406
Query 1316 KKSVKAYLDCVSKARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAA 1375
KKSVKAYLDCVS+ARNEKEK+ECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAA
Sbjct 1407 KKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAA 1466
Query 1376 IMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSK 1435
IMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSK
Sbjct 1467 IMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSK 1526
Query 1436 QNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDLIYSD 1495
QNQLSKTERLHQASECLDNLDDPTDQ+AIEQCLEGLSDSERALILGIKRQADEVD IYSD
Sbjct 1527 QNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSD 1586
Query 1496 LRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYE 1555
LRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYE
Sbjct 1587 LRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYE 1646
Query 1556 TEKTIKDKNLEAKLANALGGNkkdddkekskkstaeakvesNKIDKDVAETAKNISEIAL 1615
TEKTIKDKNLEAKLA+ALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIAL
Sbjct 1647 TEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVESNKIDKDVAETAKNISEIAL 1706
Query 1616 KNKKEKSGEFVDENGNPIddkkktekqdetSPVKQAFIGKSDPTFVLAQYTPIEITLTSK 1675
KNKKEK+GEFVDENGNPIDDKKK+EKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSK
Sbjct 1707 KNKKEKNGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSK 1766
Query 1676 VDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITP 1735
VDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITP
Sbjct 1767 VDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITP 1826
Query 1736 DGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGL 1795
DGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGL
Sbjct 1827 DGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGL 1886
Query 1796 GKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDI 1855
GKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDI
Sbjct 1887 GKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDI 1946
Query 1856 DFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1897
DFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
Sbjct 1947 DFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN 1988
Score = 741 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/1006 (80%), Positives = 855/1006 (85%), Gaps = 33/1006 (3%)
Query 9 ETSKKTQQHSPQDLSNEETTEANRFedsskeskessdHHLDNPTETKTNFDEYKSEETQT 68
ETSKKTQQHSPQDLSNEE+TE N+FEDSSKESKESSD LDNPTETKTNFD KSEETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 69 QMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeeiqepneednqennGYQ 128
QMDS G+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED+QENNGYQ
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 129 EETQMDLIDDETSKKTQQHSPQDLSNEETTKANRFedsskeskessdHHLDNPTETKTNF 188
EETQ +LIDDETSKKTQQHSPQDLSNEE+T N+FEDSSKESKESSD LDNPTETKTNF
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 189 DEYESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLdeeiqepne 248
D SEETQTQMDSGG+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NE
Sbjct 319 DGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNE 378
Query 249 eddqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANRFedsskeskessdHHL 308
EDDQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEEATE N+FEDSSKESKESSD L
Sbjct 379 EDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYL 438
Query 309 DNPTETKTNFDEYESEEITNDSNDQEiikgskkkyiiggivvavliviilFSRSIFHYFM 368
DNPTETKTNFDE SEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM
Sbjct 439 DNPTETKTNFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFM 498
Query 369 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 428
PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN
Sbjct 499 PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLN 558
Query 429 IAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTEEERI 488
IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI
Sbjct 559 IAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERI 618
Query 489 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGLQ 548
KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEER+ECLKLINDPEIREKFRKEL LQ
Sbjct 619 KCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQ 678
Query 549 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKECLKNIPQ 608
KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERK CLK++P+
Sbjct 679 KELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLKDLPK 738
Query 609 DLQKELLADMSVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQV-------LDCLKN 661
DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +
Sbjct 739 DLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ 798
Query 662 AKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCVSQAKTEDEKKECeklltpeakkll 720
AKT+ E+K C K L + + + AK S+KAY DCVSQAK EDEKKECEKLLTPEA+KLL
Sbjct 799 AKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEARKLL 858
Query 721 eeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeakksvkaYLDCVSQaktea 780
E++A LDC+ + E + P + AK SVKAY DCVSQAK EA
Sbjct 859 EQHA-------LDCLKN-AKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEA 910
Query 781 ekkeceklltPEAKKLLERQA-------LDCLKNAKTDEERKKCLKDLPKDLQKKV-LAK 832
EKKECEKLLTPEAKKLLE +A LDC+ +AKT+ E+K C K L + +KK+ AK
Sbjct 911 EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 833 ESVKAYLDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRAC 892
SVKAYLDCVSQAK E EKKECEKLLTPEAKK LEEAK S+KAY DC+SQA+NE+E++ C
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 1030
Query 893 EKLLTPEAKKLLEQEVKKSVKAYLDCISKARNEREKQECeklltpeakklleeakeslka 952
EKLLTPEAKKLLEQ+ LDC+ +A+ E +K+ C P + AKES+KA
Sbjct 1031 EKLLTPEAKKLLEQQA-------LDCLKNAKTEADKKRC-VKDLPKDLQKKVLAKESVKA 1082
Query 953 YKDCVSRARNekekkeceklltpeakklleeeakeSVKAYLDCVSQ 998
YKDCVSRARN K L K L EEAK SVKAYLDCVSQ
Sbjct 1083 YKDCVSRARN-EKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQ 1127
Score = 256 bits (957), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 290/326 (89%), Positives = 302/326 (93%), Gaps = 0/326 (0%)
Query 1 MNEENDKFETSKKTQQHSPQDLSNEETTEANRFedsskeskessdHHLDNPTETKTNFDE 60
MNEENDK+ETSKKTQQHSPQDLSNEE+TE N+FEDSSKESKESSDHHL+NPTETKTNFD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 61 YKSEETQTQMDsegnetsessngsLADKLFKKARKLVDNKRPFTQQKnldeeiqepneed 120
KSEETQTQMDS G+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEE QE NEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 121 nqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEETTKANRFedsskeskessdHHLDN 180
+QENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEE+T N+FEDSSKESKESSD LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 181 PTETKTNFDEYESEETQTQMDsggnetsessngsLADKLFKKARKLVDNKRPFTQQKNLd 240
PTETKTNFD SEETQTQMDSGG+ETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD
Sbjct 181 PTETKTNFDGDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLD 240
Query 241 eeiqepneeddqennGYQEETQMDLIDDETSKKTQQHSPQDLSNEEATEANRFedsskes 300
EE QE NEEDDQENNGYQEETQ +LIDDETSKKTQQHSPQDLSNEEATE N+FEDSSKES
Sbjct 241 EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKES 300
Query 301 kessdHHLDNPTETKTNFDEYESEEI 326
KESSD LDNPTETKTNFD SEE
Sbjct 301 KESSDPYLDNPTETKTNFDGDKSEET 326
Score = 253 bits (946), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 321/499 (65%), Positives = 376/499 (76%), Gaps = 58/499 (11%)
Query 472 EAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKL 531
+ Y+DCIKNAKTE E+ CL + E + + L+QQ ALDCLKNAKTDEER+ CLK
Sbjct 682 QEYKDCIKNAKTEAEKNECLKGLSKEAIER--LKQQ----ALDCLKNAKTDEERKKCLK- 734
Query 532 INDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA----- 586
++ ++ ++ + ++ YKDC+ +AK EAEK+EC K L+ EA L ++A
Sbjct 735 ----DLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVK 790
Query 587 --LDCLKNAKTDEERKECLKNIPQDLQKELL-ADMSVKAYKDCVSKARNekekkecekLL 643
LDC+ +AKT+ E+KEC K + + +K L A SVKAY DCVS+A+NE EKKECEKLL
Sbjct 791 AYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLL 850
Query 644 TPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTED 703
TPEA+K LEQ+ LDCLKNAKTDEERKKC+KDLPKDLQSD+LAKES+KAYKDCVSQAK E
Sbjct 851 TPEARKLLEQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLAKESVKAYKDCVSQAKNEA 910
Query 704 EKKECeklltpeakklleeeakeSVKAYLDCVSQakteaekkeceklltpeakkkleeak 763
EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEA+KKLEEAK
Sbjct 911 EKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAK 970
Query 764 ksvkaYLDCVSQakteaekkeceklltPEAKKLLERQA------LDCLKNAKTDEE---- 813
KSVKAYLDCVSQAK E EKKECEKLLTPEAKK LE LDC+ +AK ++E
Sbjct 971 KSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEKKEC 1030
Query 814 ----------------------------RKKCLKDLPKDLQKKVLAKESVKAYLDCVSQa 845
+K+C+KDLPKDLQKKVLAKESVKAY DCVS+A
Sbjct 1031 EKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYKDCVSRA 1090
Query 846 kteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTPEAKKLLE 905
+ E EKKECEKLLTPEAKKLLEEAK S+KAY DC+SQA+ E E++ CEKLLTPEAKKLLE
Sbjct 1091 RNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLE 1150
Query 906 QEVKKSVKAYLDCISKARN 924
E K S+KAY DC+S+ARN
Sbjct 1151 -EAKESLKAYKDCVSRARN 1168
Score = 240 bits (894), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 268/506 (53%), Positives = 342/506 (68%), Gaps = 65/506 (12%)
Query 433 EDKNPLRAFYECISNGGNYEE---Clk--likdkklqdqmkktlEAYNDCIKNAKTEEER 487
E K++++A+ +C+S++ N +E C K KK ++ KK++ AY DC+ +AK E+E+
Sbjct 968 EAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNEDEK 1027
Query 488 IKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLKLINDPEIREKFRKELGL 547
C L+ E K LL+QQ ALDCLKNAKT+ +++ C+K ++ ++K +
Sbjct 1028 KECEKLLTPEA--KKLLEQQ----ALDCLKNAKTEADKKRCVK-----DLPKDLQKKVLA 1076
Query 548 QKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA------LDCLKNAKTDEERKE 601
+ ++ YKDC+ A+ E EK+EC K L+ EA L + LDC+ +AKT+ E+KE
Sbjct 1077 KESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKE 1136
Query 602 CLKNIPQDLQKELLADM--SVKAYKDCVSKARNekekkecekLLTPEAKKKLEQQVLDCL 659
C K + + K LL + S+KAYKDCVS+ARNEKEKKECEKLLTPEAKK LEQQ LDCL
Sbjct 1137 CEKLLTPE-AKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCL 1195
Query 660 KNAKTDEERKKCLKDLPKDLQSDILAKESLKAYKDCVSQAKTEDEKKECeklltpeakkl 719
KNAKT+ ++K+C+KDLPKDLQ +LAKES+KAY DCVS+A+ E EKKE L K
Sbjct 1196 KNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKE-CEKLLTPEAKK 1254
Query 720 leeeakeSVKAYLDCVSQakteaekke-ceklltpeakkkleeakksvkaYLDCVSQakt 778
L EEAKES+KAY DC+SQA+ E E++ L K +E KKSVKAYLDCVSQAKT
Sbjct 1255 LLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKT 1314
Query 779 eaekkeceklltPEAKKLLERQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAY 838
EAEKKECEKLLTPEA+K+L +Q L+CL +A +EERK CLK+LPKDLQ +VLAKES+KA
Sbjct 1315 EAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKA- 1373
Query 839 LDCVSQakteaekkeceklltpeakklleeakeslkaYKDCLSQARNEEERRACEKLLTP 898
YKDCLSQARNEEERRACEKLLTP
Sbjct 1374 -------------------------------------YKDCLSQARNEEERRACEKLLTP 1396
Query 899 EAKKLLEQEVKKSVKAYLDCISKARN 924
EA+KLLEQEVKKSVKAYLDC+S+ARN
Sbjct 1397 EARKLLEQEVKKSVKAYLDCVSRARN 1422
Score = 107 bits (390), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/255 (42%), Positives = 158/255 (62%), Gaps = 31/255 (12%)
Query 473 AYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQ---KVQVALDCLKNAKTDEERNECL 529
AY+DC+ +A+ EEER C L+ E + LL+Q+ V+ LDC+ +AKT+ E++EC
Sbjct 1265 AYKDCLSQARNEEERRACEKLLTPEA--RKLLEQEVKKSVKAYLDCVSQAKTEAEKKECE 1322
Query 530 KLINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIER-LKQQAL- 587
KL+ PE R KF L K++ +C+ +A E E++ CLK L+K+ E L +++L
Sbjct 1323 KLLT-PEAR-KF-----LAKQVL---NCLEKAGNEEERKACLKNLPKDLQENVLAKESLK 1372
Query 588 ---DCLKNAKTDEERKECLKNIPQDLQKELLADM--SVKAYKDCVSKARNekekkecekL 642
DCL +A+ +EER+ C K + + +K L ++ SVKAY DCVS+ARNEKEKKECEKL
Sbjct 1373 AYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKL 1432
Query 643 LTPEAKKKL-------EQQVLDCLKNAKTDE--ERKKCLKDLPKDLQSDILAKESLKAYK 693
LTPEA+K L ++ + DCLKNA ++ KCL +L+ + + L KA
Sbjct 1433 LTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVL 1492
Query 694 DCVSQAKTEDEKKEC 708
DC+ A+T++EK+ C
Sbjct 1493 DCLKTARTDEEKRKC 1507
Score = 45.3 bits (152), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/115 (35%), Positives = 70/115 (61%), Gaps = 14/115 (12%)
Query 473 AYNDCIKNAKTEE--ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECL 529
A +DC+KNA ++ +KCLD L +E+LK L++ + + LDCLK A+TDEE+ C
Sbjct 1451 AIKDCLKNADPNDRAAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQ 1508
Query 530 KLIND--PEIREKF----RKELGLQKELQEYKDCIKNAKTEAEK---NECLKGLS 575
+L +D EI++K +++L+ L++ +C+ N +++ ++CL GLS
Sbjct 1509 NLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLS 1563 |
26) HPGAM_02695 in NC_017371
|
> JQ685135|1|G1|442739055|AGC69787.1|Helicobacter_pylori_J166_isolate_31803-4moA/rOut3|+|1..5967|cagY|-|cag
pathogenicity island
protein Y
Length=1988
Score = 1238 bits (4696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1042/1397 (75%), Positives = 1132/1397 (82%), Gaps = 152/1397 (10%)
Query 686 SVKAYLDCVSQAKTEAEKQECeklltpeakkkleeakkSIRVYLDCVSkakneaekke-- 743
++ AY DC+ +AKTE E+ C L+ E KK ++ ++V LDC+ +AK + E+KE
Sbjct 600 TLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECL 659
Query 744 -ceklltpeakklleeeakeSVKAYLDCVSQAKTEAEKQECeklltpeakkkleeakkSI 802
+ K E E + ++ Y DC+ +AKTEAEK+EC K L+ EA +L +
Sbjct 660 KLINDPEIREKFRKELELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQA--- 716
Query 803 RVYLDCVSQAKTEAEKQECEKLLTPEakklleeskksvkaYLDCVSKAKNEAERKECEKL 862
LDC+ +AKT+ E++ C K L P + +K SVKAY DCVS+AKNEAE+KECEKL
Sbjct 717 ---LDCLKNAKTDEERKKCLKDL-PKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKL 772
Query 863 LTPEARKLLEE-AKESVKAYKDCVSRARNekekkecekLLTPEARKLLEESKKSVKAYLD 921
LTPEA+KLLEE AKESVKAY DCVS+A+ E EKKECEKLLTPEARK LEE+KKSVKAYLD
Sbjct 773 LTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLD 832
Query 922 CVSQAKNEAERKECEKLLTPEARKLLEE-------------------------------A 950
CVSQAKNE E+KECEKLLTPEARKLLE+ A
Sbjct 833 CVSQAKNEDEKKECEKLLTPEARKLLEQHALDCLKNAKTDEERKKCVKDLPKDLQSDVLA 892
Query 951 KESVKAYKDCVSRARNekekkecekLLTPEAKKKLEQQV-------LDCLKNAKTEAEKK 1003
KESVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LDC+ +AKTEAEKK
Sbjct 893 KESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKK 952
Query 1004 RCVKDLPKDLQKKVL-AKESVRVYLDCVSKAKNEAERKECEKLLTPEARKLLEEAKESVK 1062
C K L + +KK+ AK SV+ YLDCVS+AKNE E+KECEKLLTPEA+K LEEAK SVK
Sbjct 953 ECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEAKKKLEEAKKSVK 1012
Query 1063 AYKDCVSRARNekekkecekLLTPEARKLLEQEV-------------------------- 1096
AY DCVS+A+NE EKKECEKLLTPEA+KLLEQ+
Sbjct 1013 AYLDCVSQAKNEDEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQK 1072
Query 1097 ----KKSVKAYKDCVSRARNekekkecekLLTPEARKLLENQA------LDCLKNAKTEA 1146
K SVKAYKDCVSRARNEKEKKECEKLLTPEA+KLLE+ LDC+ +AKTEA
Sbjct 1073 KVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEA 1132
Query 1147 EKKRCVKDLPKDLQKKVL--AKESVRVYLDCVSRARNekekkecekLLTPEARKLLEE-- 1202
EKK C K L + KK+L AKES++ Y DCVSRARNEKEKKECEKLLTPEA+KLLE+
Sbjct 1133 EKKECEKLLTPE-AKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQA 1191
Query 1203 -----------------------------AKESVRVYLDCVSRARNekekkecekLLTPE 1233
AKESV+ YLDCVSRARNEKEKKECEKLLTPE
Sbjct 1192 LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPE 1251
Query 1234 ARKLLEEAKESVKAYLDCVSQAKTEAEKQECEKLLTPEARKLLE-ESKKSVKAYLDCVSK 1292
A+KLLEEAKES+KAY DC+SQA+ E E++ CEKLLTPEARKLLE E KKSVKAYLDCVS+
Sbjct 1252 AKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQ 1311
Query 1293 AKNEAERKECEKLLTPEARKLLEE-------------------------------AKESV 1321
AK EAE+KECEKLLTPEARK+L AKES+
Sbjct 1312 AKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESL 1371
Query 1322 KAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEK 1381
KAYKDCLSQARNE ERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEK+ECEK
Sbjct 1372 KAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEK 1431
Query 1382 YLTPEARKFLEKQRQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAV 1441
LTPEARKFL K+ QQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAV
Sbjct 1432 LLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAV 1491
Query 1442 LDCLKTARTDEEKRKCQNLYSDLIQEIqnkkaqnkqnqLSKTERLHQASECLDNLDDPTD 1501
LDCLKTARTDEEKRKCQNLYSDLIQEIQNK++Q+KQNQLSKTERLHQASECLDNLDDPTD
Sbjct 1492 LDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQNQLSKTERLHQASECLDNLDDPTD 1551
Query 1502 QEAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRSRKTFDNMAAKGYPLLPMDFKNG 1561
Q+AIEQCLEGLSDSERALILGIKRQADEVDRIYSDLR+RKTFDNMAAKGYPLLPMDFKNG
Sbjct 1552 QQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFDNMAAKGYPLLPMDFKNG 1611
Query 1562 GDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIkdksleaklakalggdkkdd 1621
GDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDK+LEAKLAKALGG+KKDD
Sbjct 1612 GDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKKDD 1671
Query 1622 dkekskkPTAETKAESNKIDKDVAETAKNISEIALKNKKENNGGFVDENGNPVddkkkee 1681
DKEKSKK+TAE+K ESNKIDKDVAETAKNISEIALKNKKE+NG FVDENGNP+DDKKK E
Sbjct 1672 DKEKSKKSTAEAKVESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKAE 1731
Query 1682 kqdeTSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMI 1741
KQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMI
Sbjct 1732 KQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMI 1791
Query 1742 LLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYV 1801
LLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYV
Sbjct 1792 LLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYV 1851
Query 1802 NNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQS 1861
NNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQS
Sbjct 1852 NNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQS 1911
Query 1862 SAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTK 1921
SAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTK
Sbjct 1912 SAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTK 1971
Query 1922 TLSREHEEITTSPKGGN 1938
TLSREHEEITTSPKGGN
Sbjct 1972 TLSREHEEITTSPKGGN 1988
Score = 769 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 879/1282 (69%), Positives = 988/1282 (78%), Gaps = 157/1282 (12%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFEDLLKEESSDNH--LDNPTETKTHFDEDKLEETQT 66
ETSKK+QQ+SPQDLSNEEATE NHFED KE ++ LDNPTETKT+FD DK EETQT
Sbjct 269 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 328
Query 67 QMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLneeddqennehq 126
QMDSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+Q LNEEDDQENN Q
Sbjct 329 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 388
Query 127 eetqtdLIDGETSEKAQQDSPQDLSNEEATEANHFEDLLKEESSDNHLDNPTESSDNHLD 186
EETQT+LID+ETS K+QQ+SPQDLSNEEATE NHFE + ++ ESSD LD
Sbjct 389 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFE---------DSSKESKESSDPYLD 439
Query 187 NSAETKTQETKTHFDEDKLEEITDDSNDQEiikgskkkyiiggivvavliviilFSRSIF 246
N++ETKT +FDEDK EEIT+DSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIF
Sbjct 440 NPTETKT-----NFDEDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIF 494
Query 247 HYFVPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLY 306
HYF+PLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLY
Sbjct 495 HYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLY 554
Query 307 NYLNIAEIEDKNPLRAFYECISNGGNYEEClklikdkklqdqmkktlEAYNDCIKNAKTE 366
NYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTE
Sbjct 555 NYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTE 614
Query 367 EERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIrekfrke 426
EERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKE
Sbjct 615 EERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKE 674
Query 427 lelqkelqeYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLK 486
LELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEER+ CLK
Sbjct 675 LELQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERKKCLK 734
Query 487 NIPQDLQKELLADMSVKAYKDCVSRARNekekkecekLLTPEAKKKLEQQV-------LD 539
++P+DLQ ++LA SVKAYKDCVS+A+NE EKKECEKLLTPEAKK LE++ LD
Sbjct 735 DLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLD 794
Query 540 CLKNAKTDEERKKCLKDLPKDLQSDI-LAKESLKAYKDCASQakteaekkeceklltpea 598
C+ +AKT+ E+K C K L + + + AK S+KAY DC SQAK E EKKECEKLLTPEA
Sbjct 795 CVSQAKTEAEKKECEKLLTPEARKKLEEAKKSVKAYLDCVSQAKNEDEKKECEKLLTPEA 854
Query 599 kklleeeakeSVKAYLDCVSQAKTEAEKQECeklltpeakkkleeakkSIRVYLDCVSka 658
+KLLE++A LDC+ +AKT+ E++ C P + AK S++ Y DCVS+A
Sbjct 855 RKLLEQHA-------LDCLKNAKTDEERKKC-VKDLPKDLQSDVLAKESVKAYKDCVSQA 906
Query 659 kneaekkeceklltpeakklleeeakeSVKAYLDCVSQAKTEAEKQECeklltpeakkkl 718
KNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEK+ECEKLLTPEA+KKL
Sbjct 907 KNEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKL 966
Query 719 eeakkSIRVYLDCVSkakneaekkeceklltpeakklleeeakeSVKAYLDCVSQAKTEA 778
EEAKKS++ YLDCVS ++ + K L K EEAK SVKAYLDCVSQAK E
Sbjct 967 EEAKKSVKAYLDCVS-QAKNEDEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKNED 1025
Query 779 EKQECeklltpeakkkleeakkSIRVYLDCVSQAKTEAEKQECEK--------------- 823
EK+ECEKLLTPEAKK LE+ LDC+ +AKTEA+K+ C K
Sbjct 1026 EKKECEKLLTPEAKKLLEQQA------LDCLKNAKTEADKKRCVKDLPKDLQKKVLAKES 1079
Query 824 ----------------------LLTPEakklleeskksvkaYLDCVSKAKNEAERKECEK 861
LLTPEAKKLLEE+KKSVKAYLDCVS+AK EAE+KECEK
Sbjct 1080 VKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEK 1139
Query 862 LLTPEARKLLEEAKESVKAYKDCVSRARNekekkecekLLTPEARKLLEE---------- 911
LLTPEA+KLLEEAKES+KAYKDCVSRARNEKEKKECEKLLTPEA+KLLE+
Sbjct 1140 LLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAK 1199
Query 912 ---------------------SKKSVKAYLDCVS-------------------------- 924
+K SVKAYLDCVS
Sbjct 1200 TEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEA 1259
Query 925 ------------QAKNEAERKECEKLLTPEARKLLE-EAKESVKAYKDCVSRARNekekk 971
QA+NE ER+ CEKLLTPEARKLLE E K SVKAY DCVS+A+ E EKK
Sbjct 1260 KESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSQAKTEAEKK 1319
Query 972 ecekLLTPEAKKKLEQQVLDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVS 1031
ECEKLLTPEA+K L +QVL+CL +A E E+K C+K+LPKDLQ +VLAKES++ Y DC+S
Sbjct 1320 ECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLAKESLKAYKDCLS 1379
Query 1032 KAKNEAERKECEKLLTPEARKLLE-EAKESVKAYKDCVSRARNekekkecekLLTPEARK 1090
+A+NE ER+ CEKLLTPEARKLLE E K SVKAY DCVSRARNEKEKKECEKLLTPEARK
Sbjct 1380 QARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARK 1439
Query 1091 LLEQEVKKSVKAYKDCVSRARNekekkecekL--LTPEAR-KLL----ENQALDCLKNAK 1143
+L +E+++ KA KDC+ A + L L+ E + K L E+ LDCLK A+
Sbjct 1440 FLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTAR 1499
Query 1144 TEAEKKRCVK---DLPKDLQKK 1162
T+ EK++C + DL +++Q+K
Sbjct 1500 TDEEKRKCQNLYSDLIQEIQNK 1521
Score = 138 bits (507), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 150/205 (74%), Positives = 170/205 (83%), Gaps = 8/205 (3%)
Query 1 MNEENDKLETSKKAQQDSPQDLSNEEATEANHFEDLLKEESSD--NHLDNPTETKTHFDE 58
MNEENDKLETSKK+QQ+SPQDLSNEEATE NHFED KE +HL+NPTETKT+FD
Sbjct 1 MNEENDKLETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDHHLNNPTETKTNFDG 60
Query 59 DKLEETQTQMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLneed 118
DK EETQTQMDSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+Q LNEED
Sbjct 61 DKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEED 120
Query 119 dqennehqeetqtdLIDGETSEKAQQDSPQDLSNEEATEANHFEDLLKEESSDNH--LDN 176
DQENN QEETQT+LID+ETS K+QQ+SPQDLSNEEATE NHFED KE ++ LDN
Sbjct 121 DQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDN 180
Query 177 PTESSDNHLDNSAETKTQETKTHFD 201
PTE+ N K++ET+T+ D
Sbjct 181 PTETKTNF----DGDKSEETQTQMD 201
Score = 124 bits (455), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 142/197 (73%), Positives = 162/197 (83%), Gaps = 8/197 (4%)
Query 9 ETSKKAQQDSPQDLSNEEATEANHFEDLLKEESSDNH--LDNPTETKTHFDEDKLEETQT 66
ETSKK+QQ+SPQDLSNEEATE NHFED KE ++ LDNPTETKT+FD DK EETQT
Sbjct 139 ETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDGDKSEETQT 198
Query 67 QMDsggnetsessngsLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLneeddqennehq 126
QMDSGG+ETSESSNGSLADKLFKKARKLVD+KRPFTQQK+LDEE+Q LNEEDDQENN Q
Sbjct 199 QMDSGGDETSESSNGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQENNGYQ 258
Query 127 eetqtdLIDGETSEKAQQDSPQDLSNEEATEANHFEDLLKEESSDNH--LDNPTESSDNH 184
EETQT+LID+ETS K+QQ+SPQDLSNEEATE NHFED KE ++ LDNPTE+ N
Sbjct 259 EETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNF 318
Query 185 LDNSAETKTQETKTHFD 201
K++ET+T+ D
Sbjct 319 ----DGDKSEETQTQMD 331
Score = 94.7 bits (340), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/226 (36%), Positives = 133/226 (59%), Gaps = 21/226 (9%)
Query 1240 EAKESVKAYLDCVSQAKTEAEKQECEKLLTPEARKLLEESKKSVKAYLDCVSKAKNEAER 1299
E K++++A+ +C+S++ ++ +EC KL+ +KL ++ KK++ AY DC+ +AK E ER
Sbjct 563 EDKNPLRAFYECISNG---GNYEECLKLIK--DKKLQDQMKKTLEAYNDCIKNAKTEEER 617
Query 1300 KECEKLLTPEA--RKLLEEAKESVKAYKDCLSQARNETERRACEKLLT-PEARKLL--EQ 1354
C L+ E + LL++ K V DCL +A+ + ER+ C KL+ PE R + E
Sbjct 618 IKCLDLIKDENLKKSLLNQQKVQVAL--DCLKNAKTDEERKECLKLINDPEIREKFRKEL 675
Query 1355 EVKKSVKAYLDCVSRARNEKEKQECEKYLTPEARKFLEKQRQQKDKAIKDCLKNADPNDR 1414
E++K ++ Y DC+ A+ E EK+EC K L+ EA +E+ +QQ DCLKNA ++
Sbjct 676 ELQKELQEYKDCIKNAKTEAEKNECLKGLSKEA---IERLKQQ----ALDCLKNAKTDE- 727
Query 1415 AAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNL 1460
KCL +L+ + + L KA DC+ A+ + EK+ C++L
Sbjct 728 -ERKKCLKDLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKL 772
Score = 45.3 bits (152), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/161 (32%), Positives = 94/161 (59%), Gaps = 20/161 (12%)
Query 1355 EVKKSVKAYLDCVSRARNEKEKQECEKYLTPEARKFLEKQRQQKDKAIKDCLKNADPNDR 1414
E K++++A+ +C+S + N +EC K L + + L+ Q ++ A +DC+KNA ++
Sbjct 563 EDKNPLRAFYECISNGGNY---EECLK-LIKDKK--LQDQMKKTLEAYNDCIKNAKTEE- 615
Query 1415 AAIMKCLDGLSDEEKLK--YLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIqnkk 1472
+KCLD L +E+LK L++ + + LDCLK A+TDEE++ C + LI++ + +
Sbjct 616 -ERIKCLD-LIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLK----LINDPEIRE 669
Query 1473 aqnkqnqLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLS 1513
K+ +L K L++ +C+ N + + ++CL GLS
Sbjct 670 KFRKELELQKE--LQEYKDCIKN---AKTEAEKNECLKGLS 705
Score = 41.9 bits (139), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/215 (30%), Positives = 111/215 (52%), Gaps = 39/215 (18%)
Query 1316 EAKESVKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKE 1375
E K++++A+ +C+S++ N E C KL+ K L++++KK++ AY DC+ A+ E E
Sbjct 563 EDKNPLRAFYECISNGGNYEE---CLKLIKD---KKLQDQMKKTLEAYNDCIKNAKTEEE 616
Query 1376 KQECEKYLTPEA--RKFLEKQRQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEE-KLKY 1432
+ C + E + +L+ QQK + DCLKNA ++ CL ++D E + K+
Sbjct 617 RIKCLDLIKDENLKKSLLN---QQKVQVALDCLKNAKTDE--ERKECLKLINDPEIREKF 671
Query 1433 LQEAREKAVL----DCLKTARTDEEKRKCQNLYSDLIQEIqnkkaqnkqnqLSKTERL-H 1487
+E + L DC+K A+T+ EK C +L +E ERL +
Sbjct 672 RKELELQKELQEYKDCIKNAKTEAEKNEC---LKGLSKEA--------------IERLKQ 714
Query 1488 QASECLDNLDDPTDQEAIEQCLEGLSDSERALILG 1522
QA +CL N + +E +CL +L+ ++ IL+
Sbjct 715 QALDCLKN---AKTDEERKKCLKDLPKDLQSDILA 746 |