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Homologs of int gene of GQ338312

511

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) intL
( NP_290239.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_002655
(Escherichia coli EDL933)

0.0

100

2) ECO55CA74_21080
( YP_006161321.1 )

putative integrase for prophage 933L and the LEE pathogenicity island

NC_017656
(Escherichia coli RM12579)

0.0

100

3) ECs4534
( NP_312561.1 )

integrase

NC_002695
(Escherichia coli Sakai)

0.0

100

4) intL
( YP_003080451.1 )

integrase for prophage 933L and the LEE pathogenicity island

NC_013008
(Escherichia coli TW14359)

0.0

100

5) CDCO157_4272
( YP_006315138.1 )

putative integrase

NC_017906
(Escherichia coli Xuzhou21)

0.0

100

6) intL
( YP_003501848.1 )

CP4-like integrase

NC_013941
(Escherichia coli CB9615)

0.0

100

7) ECH74115_5032
( YP_002273139.1 )

integrase

NC_011353
(Escherichia coli EC4115)

0.0

100

8) ECABU_c41260
( YP_006108090.1 )

putative phage integrase

NC_017631
(Escherichia coli ABU 83972)

0.0

9) intC
( YP_006156223.1 )

putative prophage integrase

NC_017652
(Escherichia coli clone D i14)

0.0

10) intC
( YP_006151304.1 )

putative prophage integrase

NC_017651
(Escherichia coli clone D i2)

0.0

11) O3M_00580
( YP_006767801.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

0.0

12) O3O_25120
( YP_006781906.1 )

hypothetical protein

NC_018661
(Escherichia coli 2009EL-2071)

0.0

13) O3K_00550
( YP_006776846.1 )

hypothetical protein

NC_018658
(Escherichia coli 2011C-3493)

0.0

14) ETEC_3899
( YP_006117440.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

0.0

15) ybl160
( YP_003001213.1 )

ybl160

NC_012892
(Escherichia coli BL21(DE3))

0.0

16) ECD_03516
( YP_003056085.1 )

hypothetical protein

NC_012971
(Escherichia coli BL21(DE3))

0.0

17) intC
( NP_756353.1 )

prophage integrase

NC_004431
(Escherichia coli CFT073)

0.0

18) ECBD_0066
( YP_003034330.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

0.0

19) ECB_03516
( YP_003046695.1 )

Int

NC_012967
(Escherichia coli REL606)

0.0

20) SSON_3744
( YP_312525.1 )

integrase

NC_007384
(Shigella sonnei Ss046)

0.0

21) CE10_4227
( YP_006146216.1 )

putative prophage integrase

NC_017646
(Escherichia coli CE10)

0.0

22) ECIAI39_4188
( YP_002410064.1 )

putative prophage integrase

NC_011750
(Escherichia coli IAI39)

0.0

23) intC
( YP_691185.1 )

integrase

NC_008258
(Shigella flexneri 8401)

1e-180

24) SFxv_4026
( YP_005729297.1 )

Sai integrase

NC_017328
(Shigella flexneri 2002017)

3e-180

25) S4835
( NP_839238.1 )

integrase

NC_004741
(Shigella flexneri 2457T)

3e-180

26) SF3698
( NP_709437.1 )

integrase

NC_004337
(Shigella flexneri 301)

3e-180

27) ECP_3765
( YP_671637.1 )

phage integrase

NC_008253
(Escherichia coli 536)

3e-180

28) SSON53_21650
( YP_005458822.1 )

hypothetical protein

NC_016822
(Shigella sonnei 53G)

2e-158

29) YE4117
( YP_001008254.1 )

putative phage integrase

NC_008800
(Yersinia enterocolitica 8081)

8e-155

30) YPTB3886
( YP_072362.1 )

integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

1e-150

31) YPTS_4103
( YP_001874506.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

1e-150

32) EAE_06555
( YP_004591514.1 )

hypothetical protein

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-150

33) P12B_c3788
( YP_006170775.1 )

Sai integrase-like protein

NC_017663
(Escherichia coli P12b)

1e-148

34) plu0125
( NP_927495.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

4e-148

35) EKO11_0064
( YP_005275792.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

1e-147

36) KO11_04405
( YP_006163219.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

1e-147

37) LY180_18845
( YP_008566814.1 )

integrase

NC_022364
(Escherichia coli LY180)

1e-147

38) ECW_m3936
( YP_006126516.1 )

putative integrase

NC_017635
(Escherichia coli W)

1e-147

39) WFL_19235
( YP_006175275.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

1e-147

40) SMWW4_v1c00920
( YP_007403919.1 )

phage integrase

NC_020211
(Serratia marcescens WW4)

1e-144

41) ETAE_3428
( YP_003297470.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

4e-144

42) YE105_C3845
( YP_004300042.1 )

putative phage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

2e-142

43) Y11_30661
( YP_006006565.1 )

phage integrase

NC_017564
(Yersinia enterocolitica Y11)

2e-141

44) xerC4
( NP_994679.1 )

phage integrase

NC_005810
(Yersinia pestis 91001)

5e-141

45) A1122_05665
( YP_005520819.1 )

putative phage integrase

NC_017168
(Yersinia pestis A1122)

5e-141

46) YPA_4123
( YP_654029.1 )

putative phage integrase

NC_008150
(Yersinia pestis Antiqua)

5e-141

47) YPO4033
( YP_002348896.1 )

phage integrase

NC_003143
(Yersinia pestis CO92)

5e-141

48) YPD4_3547
( YP_005506754.1 )

putative phage integrase

NC_017154
(Yersinia pestis D106004)

5e-141

49) YPD8_3553
( YP_005510614.1 )

putative phage integrase

NC_017160
(Yersinia pestis D182038)

5e-141

50) y4052
( NP_671345.1 )

integrase

NC_004088
(Yersinia pestis KIM)

5e-141

51) YPN_3680
( YP_649607.1 )

phage integrase

NC_008149
(Yersinia pestis Nepal516)

5e-141

52) YPDSF_3775
( YP_001165093.1 )

phage integrase

NC_009381
(Yersinia pestis Pestoides F)

5e-141

53) YPC_4545
( YP_005626217.1 )

putative phage integrase

NC_017265
(Yersinia pestis Harbin 35)

2e-140

54) YpAngola_A4153
( YP_001608430.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

9e-141

55) YPK_0061
( YP_001718828.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-140

56) ECO26_4941
( YP_003231837.1 )

integrase

NC_013361
(Escherichia coli 11368)

2e-140

57) SEEH1578_04845
( YP_008245042.1 )

integrase

NC_021810
(Salmonella enterica 41578)

2e-140

58) EC042_3992
( YP_006098276.1 )

integrase

NC_017626
(Escherichia coli 042)

3e-140

59) EcSMS35_4002
( YP_001745965.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

5e-139

60) Spro_0108
( YP_001476346.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

5e-138

61) ENC_02820
( YP_007844422.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

5e-138

62) A3UG_00595
( YP_006475574.1 )

hypothetical protein

NC_018079
(Enterobacter cloacae SDM)

6e-138

63) EbC_44590
( YP_003743837.1 )

phage integrase

NC_014306
(Erwinia billingiae Eb661)

1e-137

64) A79E_0092
( YP_006633935.1 )

phage integrase, Phage P4-associated

NC_018522
(Klebsiella pneumoniae 1084)

2e-137

65) KP1_5380
( YP_002921868.1 )

phage integrase family protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

2e-137

66) EcolC_0053
( YP_001723066.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

3e-137

67) SARI_03887
( YP_001572823.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-134

68) SEEB0189_04710
( YP_008307295.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

1e-131

69) A225_4904
( YP_006500577.1 )

phage integrase

NC_018106
(Klebsiella oxytoca E718)

2e-131

70) YPK_3149
( YP_001721873.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

2e-131

71) EAE_02780
( YP_004590770.1 )

Integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

4e-131

72) KOX_02335
( YP_005016447.1 )

Integrase

NC_016612
(Klebsiella oxytoca KCTC 1686)

4e-131

73) YpsIP31758_0884
( YP_001399868.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

4e-130

74) int
( YP_071664.1 )

phage integrase

NC_006155
(Yersinia pseudotuberculosis IP 32953)

4e-130

75) YPTS_3293
( YP_001873705.1 )

integrase family protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

4e-130

76) YPK_0925
( YP_001719679.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

4e-130

77) int4
( NP_994857.1 )

integrase

NC_005810
(Yersinia pestis 91001)

6e-130

78) A1122_00590
( YP_005519823.1 )

integrase

NC_017168
(Yersinia pestis A1122)

6e-130

79) YpAngola_A3853
( YP_001608158.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

6e-130

80) int
( YP_002345935.1 )

integrase

NC_003143
(Yersinia pestis CO92)

6e-130

81) int
( YP_005504005.1 )

integrase

NC_017154
(Yersinia pestis D106004)

6e-130

82) int
( YP_005507871.1 )

integrase

NC_017160
(Yersinia pestis D182038)

6e-130

83) YPC_0922
( YP_005622895.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

6e-130

84) y3271
( NP_670570.1 )

integrase

NC_004088
(Yersinia pestis KIM)

6e-130

85) YPN_3086
( YP_649013.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

6e-130

86) int
( YP_003567008.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

6e-130

87) YPDSF_0629
( YP_001162011.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

1e-129

88) int
( YP_002383909.1 )

Integrase

NC_011740
(Escherichia fergusonii ATCC 35469)

1e-129

89) int
( YP_008137204.1 )

integrase Int

NC_021591
(Serratia odorifera 4Rx13)

1e-129

90) M621_05660
( YP_008157963.1 )

integrase

NC_021659
(Serratia plymuthica S13)

4e-129

91) PAU_01003
( YP_003039840.1 )

putative phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-128

92) ETAC_13020
( YP_007630085.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

4e-128

93) Dda3937_00938
( YP_003884289.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

9e-128

94) A3UG_04555
( YP_006476358.1 )

prophage CPS-53 integrase

NC_018079
(Enterobacter cloacae SDM)

3e-127

95) ETEC_0316
( YP_006113905.1 )

prophage integrase

NC_017633
(Escherichia coli ETEC H10407)

7e-127

96) EcHS_A0329
( YP_001457101.1 )

site-specific recombinase, phage integrase

NC_009800
(Escherichia coli HS)

9e-127

97) ECABU_c03450
( YP_006104480.1 )

DNA integration/recombination/invertion protein

NC_017631
(Escherichia coli ABU 83972)

2e-126

98) ECSE_0264
( YP_002291539.1 )

putative phage integrase

NC_011415
(Escherichia coli SE11)

3e-126

99) O3K_20180
( YP_006780702.1 )

prophage CPS-53 integrase

NC_018658
(Escherichia coli 2011C-3493)

1e-125

100) EC55989_0268
( YP_002401394.1 )

prophage CPS-53 integrase

NC_011748
(Escherichia coli 55989)

1e-125

101) ETAC_11945
( YP_007629870.1 )

putative phage integrase

NC_020796
(Edwardsiella tarda C07-087)

9e-126

102) ECO55CA74_01660
( YP_006157517.1 )

Integrase for prophage CP-933I

NC_017656
(Escherichia coli RM12579)

9e-126

103) ETAF_0751
( YP_005698365.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

1e-125

104) int
( YP_002399202.1 )

Integrase from prophage

NC_011745
(Escherichia coli ED1a)

1e-125

105) Dd586_2842
( YP_003334387.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

2e-125

106) int
( YP_001908356.1 )

Prophage integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

2e-125

107) G2583_0351
( YP_003497974.1 )

Integrase for prophage CP-933I

NC_013941
(Escherichia coli CB9615)

2e-125

108) EcSMS35_0299
( YP_001742404.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

3e-125

109) ECs0289
( NP_308316.1 )

integrase

NC_002695
(Escherichia coli Sakai)

4e-125

110) ECNA114_2439
( YP_006139547.1 )

putative phage integrase

NC_017644
(Escherichia coli NA114)

6e-125

111) ECSF_2224
( YP_003350214.1 )

putative phage integrase

NC_013654
(Escherichia coli SE15)

6e-125

112) W5S_3565
( YP_006284507.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

1e-124

113) Z0324
( NP_285976.1 )

integrase for prophage CP-933I

NC_002655
(Escherichia coli EDL933)

9e-125

114) SMWW4_v1c08950
( YP_007404718.1 )

putative site specific integrase

NC_020211
(Serratia marcescens WW4)

9e-125

115) PAGR_g2495
( YP_005993222.1 )

site-specific recombinase, phage integrase family

NC_017554
(Pantoea ananatis PA13)

2e-124

116) ECENHK_04640
( YP_006577439.1 )

integrase

NC_018405
(Enterobacter cloacae ENHKU01)

2e-124

117) SEEH1578_21245
( YP_008248300.1 )

integrase

NC_021810
(Salmonella enterica 41578)

3e-124

118) CFSAN002069_19870
( YP_008252715.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

3e-124

119) SeHA_C2638
( YP_002046450.1 )

integrase

NC_011083
(Salmonella enterica SL476)

3e-124

120) intS
( YP_003466695.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

4e-124

121) PC1_2828
( YP_003018394.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

6e-124

122) Spro_3887
( YP_001480111.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

7e-124

123) SerAS9_4095
( YP_004507455.1 )

integrase

NC_015567
(Serratia plymuthica AS9)

9e-124

124) SerAS12_4096
( YP_004502503.1 )

integrase family protein

NC_015566
(Serratia sp. AS12)

9e-124

125) SerAS13_4096
( YP_006026917.1 )

integrase family protein

NC_017573
(Serratia sp. AS13)

9e-124

126) intS
( YP_004950715.1 )

prophage CPS-53 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

2e-123

127) KPK_4426
( YP_002240225.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

3e-123

128) int
( YP_003713510.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-123

129) PC1_3281
( YP_003018833.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

1e-122

130) ECH74115_0306
( YP_002268886.1 )

site-specific recombinase, phage integrase family

NC_011353
(Escherichia coli EC4115)

3e-122

131) Pecwa_1377
( YP_003258785.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

4e-122

132) KPHS_10130
( YP_005225313.1 )

putative site specific integrase

NC_016845
(Klebsiella pneumoniae HS11286)

5e-122

133) N559_4136
( YP_008427041.1 )

site specific integrase

NC_022082
(Klebsiella pneumoniae JM45)

5e-122

134) A225_1133
( YP_006496884.1 )

phage integrase

NC_018106
(Klebsiella oxytoca E718)

1e-121

135) SeSA_A0666
( YP_002113632.1 )

integrase

NC_011094
(Salmonella enterica CVM19633)

8e-122

136) SeSA_A0374
( YP_002113350.1 )

site-specific recombinase, phage integrase family protein

NC_011094
(Salmonella enterica CVM19633)

2e-121

137) W5S_1285
( YP_006282258.1 )

Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_017845
(Pectobacterium sp. SCC3193)

3e-121

138) PC1_2870
( YP_003018435.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

3e-121

139) S70_17360
( YP_006217973.1 )

CPS-53 (KpLE1) prophage, Sf6-like integrase

NC_017731
(Providencia stuartii MRSN 2154)

3e-121

140) ETAE_0799
( YP_003294855.1 )

site specific integrase

NC_013508
(Edwardsiella tarda EIB202)

4e-121

141) PAU_02730
( YP_003041563.1 )

putative prophage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-121

142) Pecwa_1403
( YP_003258809.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-121

143) YE105_C2844
( YP_004299043.1 )

Integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

1e-120

144) ETAF_0741
( YP_005698355.1 )

prophage CP-933I integrase protein

NC_017309
(Edwardsiella tarda FL6-60)

3e-119

145) ESA_03025
( YP_001439090.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

1e-118

146) SeHA_C4738
( YP_002048369.1 )

integrase

NC_011083
(Salmonella enterica SL476)

1e-118

147) SN31241_7100
( YP_008358628.1 )

CP4-like integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

9e-119

148) ECL_01076
( YP_003611586.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

3e-118

149) EcSMS35_3112
( YP_001745129.1 )

site-specific recombinase, phage integrase family protein

NC_010498
(Escherichia coli SMS-3-5)

5e-118

150) EcE24377A_3377
( YP_001464377.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

6e-118

151) Pat9b_1012
( YP_004114892.1 )

integrase family protein

NC_014837
(Pantoea sp. At-9b)

3e-117

152) CSSP291_04405
( YP_007439767.1 )

putative integrase

NC_020260
(Cronobacter sakazakii Sp291)

1e-116

153) ECL_03688
( YP_003614171.1 )

putative integrase

NC_014121
(Enterobacter cloacae ATCC 13047)

1e-116

154) EAE_24695
( YP_004595111.1 )

putative integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-116

155) SU5_02989
( YP_006088602.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

2e-116

156) SEEH1578_01295
( YP_008244336.1 )

Phage integrase, Phage P4-associated protein

NC_021810
(Salmonella enterica 41578)

5e-113

157) SU5_03538
( YP_006089141.1 )

Phage integrase, Phage P4-associated

NC_017623
(Salmonella enterica B182)

5e-113

158) CFSAN002069_16980
( YP_008252158.1 )

integrase

NC_021812
(Salmonella enterica CFSAN002069)

5e-113

159) SeHA_C3266
( YP_002047021.1 )

site-specific recombinase, phage integrase family

NC_011083
(Salmonella enterica SL476)

5e-113

160) intS
( YP_003712222.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

1e-112

161) ECA3460
( YP_051550.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

4e-112

162) PAU_01009
( YP_003039846.1 )

putative phage integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

3e-111

163) ENC_24500
( YP_007846063.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

5e-109

164) PputGB1_0681
( YP_001666927.1 )

integrase family protein

NC_010322
(Pseudomonas putida GB-1)

7e-109

165) A225_1439
( YP_006497184.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

1e-108

166) CFSAN001992_09575
( YP_007471661.1 )

prophage CPS-53 integrase

NC_020307
(Salmonella enterica CFSAN001992)

1e-108

167) PST_0259
( YP_001170808.1 )

phage integrase family site specific recombinase

NC_009434
(Pseudomonas stutzeri A1501)

2e-108

168) Psest_4016
( YP_007242119.1 )

integrase

NC_019936
(Pseudomonas stutzeri RCH2)

5e-108

169) SBG_2173
( YP_004731002.1 )

phage integrase

NC_015761
(Salmonella bongori NCTC 12419)

1e-105

170) YPA_0385
( YP_650298.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

2e-104

171) M495_08725
( YP_008229693.1 )

integrase

NC_021741
(Serratia liquefaciens ATCC 27592)

3e-103

172) ECNA114_4679
( YP_006141802.1 )

Putative integrase

NC_017644
(Escherichia coli NA114)

4e-98

173) CDCO157_0285
( YP_006311144.1 )

putative integrase

NC_017906
(Escherichia coli Xuzhou21)

8e-97

174) ECED1_5046
( YP_002400791.1 )

putative prophage integrase

NC_011745
(Escherichia coli ED1a)

4e-96

175) vinT
( YP_007990957.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

6e-93

176) intC
( YP_003296511.1 )

prophage Sf6-like integrase

NC_013508
(Edwardsiella tarda EIB202)

5e-91

177) EbC_31530
( YP_003742531.1 )

integrase

NC_014306
(Erwinia billingiae Eb661)

5e-91

178) GM21_1254
( YP_003021073.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

6e-89

179) RSc0968
( NP_519089.1 )

cp4-like integrase

NC_003295
(Ralstonia solanacearum GMI1000)

2e-88

180) intC
( YP_006169453.1 )

putative prophage integrase

NC_017663
(Escherichia coli P12b)

1e-87

181) EKO11_1417
( YP_005277110.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

4e-87

182) intS
( YP_006125209.1 )

prophage integrase

NC_017635
(Escherichia coli W)

4e-87

183) intS
( YP_006173930.1 )

putative integrase

NC_017664
(Escherichia coli W)

4e-87

184) UMNK88_2903
( YP_006134630.1 )

integrase

NC_017641
(Escherichia coli UMNK88)

5e-87

185) i14_4873a
( YP_006156926.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

1e-86

186) i02_4873a
( YP_006152007.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

1e-86

187) O3M_07705
( YP_006769202.1 )

prophage CPS-53 integrase

NC_018650
(Escherichia coli 2009EL-2050)

7e-87

188) O3O_17880
( YP_006783329.1 )

prophage CPS-53 integrase

NC_018661
(Escherichia coli 2009EL-2071)

7e-87

189) O3K_07755
( YP_006778258.1 )

prophage CPS-53 integrase, CPS-53 (KpLE1) prophage

NC_018658
(Escherichia coli 2011C-3493)

7e-87

190) intS
( YP_002403615.1 )

prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011748
(Escherichia coli 55989)

7e-87

191) ECO26_3335
( YP_003230282.1 )

integrase

NC_013361
(Escherichia coli 11368)

8e-87

192) CE10_2735
( YP_006144782.1 )

CPS-53 (KpLE1) prophage prophage CPS-53 integrase

NC_017646
(Escherichia coli CE10)

2e-86

193) intS
( YP_002408455.1 )

putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011750
(Escherichia coli IAI39)

2e-86

194) intB
( NP_900321.1 )

prophage CP4-like integrase

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-86

195) XBJ1_1315
( YP_003467235.1 )

CPS-53 (KpLE1) prophage; Sf6-like integrase (fragment)

NC_013892
(Xenorhabdus bovienii SS-2004)

3e-86

196) APECO1_4218
( YP_853449.1 )

phage integrase

NC_008563
(Escherichia coli APEC O1)

4e-86

197) EcDH1_1309
( YP_006091271.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

4e-86

198) intS
( YP_006129687.1 )

prophage integrase

NC_017638
(Escherichia coli DH1)

4e-86

199) E2348C_2486
( YP_002329990.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

4e-86

200) ECOK1_2630
( YP_006101776.1 )

phage integrase family protein

NC_017628
(Escherichia coli IHE3034)

4e-86

201) intS
( YP_001731284.1 )

CPS-53 (KpLE1) prophage; prophage CPS-53 integrase

NC_010473
(Escherichia coli K-12)

4e-86

202) intS
( YP_002927317.1 )

CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase

NC_012759
(Escherichia coli K-12)

4e-86

203) intS
( YP_490590.1 )

prophage CPS-53 integrase

NC_007779
(Escherichia coli K-12)

4e-86

204) intS
( NP_416850.1 )

CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase

NC_000913
(Escherichia coli K12)

4e-86

205) intS_2
( YP_008572328.1 )

Putative prophage CPS-53 integrase

NC_022370
(Escherichia coli PMV-1)

4e-86

206) intS
( YP_002392173.1 )

prophage CPS-53 integrase; CPS-53 (KpLE1) prophage

NC_011742
(Escherichia coli S88)

4e-86

207) UM146_05080
( YP_006109933.1 )

CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase

NC_017632
(Escherichia coli UM146)

4e-86

208) intC
( YP_541631.1 )

prophage integrase

NC_007946
(Escherichia coli UTI89)

4e-86

209) ECs3231
( NP_311258.1 )

prophage Sf6-like integrase

NC_002695
(Escherichia coli Sakai)

4e-86

210) intS
( YP_003079150.1 )

CPS-53 (KpLE1) prophage; prophage CPS-53 integrase

NC_013008
(Escherichia coli TW14359)

4e-86

211) ECH74115_3582
( YP_002271839.1 )

integrase

NC_011353
(Escherichia coli EC4115)

5e-86

212) intC
( NP_288921.1 )

prophage integrase

NC_002655
(Escherichia coli EDL933)

5e-86

213) CDCO157_2996
( YP_006313865.1 )

putative prophage Sf6-like integrase

NC_017906
(Escherichia coli Xuzhou21)

5e-86

214) EcSMS35_4753
( YP_001746674.1 )

phage integrase family site specific recombinase

NC_010498
(Escherichia coli SMS-3-5)

5e-86

215) CFSAN001992_11535
( YP_007472047.1 )

phage integrase family site-specific recombinase

NC_020307
(Salmonella enterica CFSAN001992)

1e-85

216) MICA_2451
( YP_004866754.1 )

phage integrase family protein

NC_016026
(Micavibrio aeruginosavorus ARL-13)

8e-86

217) SSON53_14055
( YP_005457328.1 )

prophage Sf6-like integrase

NC_016822
(Shigella sonnei 53G)

1e-85

218) intC
( YP_311283.1 )

prophage Sf6-like integrase

NC_007384
(Shigella sonnei Ss046)

1e-85

219) D782_3965
( YP_007342049.1 )

Integrase

NC_020063
(Enterobacteriaceae bacterium FGI 57)

1e-85

220) ECO55CA74_14300
( YP_006159989.1 )

prophage integrase

NC_017656
(Escherichia coli RM12579)

2e-85

221) intS
( YP_003500406.1 )

prophage integrase

NC_013941
(Escherichia coli CB9615)

3e-85

222) ECP_4521
( YP_672358.1 )

prophage P4 integrase

NC_008253
(Escherichia coli 536)

5e-85

223) Rfer_1354
( YP_522619.1 )

phage integrase

NC_007908
(Rhodoferax ferrireducens T118)

7e-85

224) Dd586_0394
( YP_003331995.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

7e-85

225) ECABU_c48360
( YP_006108746.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

1e-84

226) UM146_21610
( YP_006113162.1 )

prophage P4 integrase

NC_017632
(Escherichia coli UM146)

1e-84

227) APECO78_02320
( YP_007379647.1 )

phage integrase family site specific recombinase

NC_020163
(Escherichia coli APEC O78)

2e-84

228) CE10_5017
( YP_006146968.1 )

phage integrase family site specific recombinase

NC_017646
(Escherichia coli CE10)

2e-84

229) intB
( YP_543812.1 )

prophage P4 integrase

NC_007946
(Escherichia coli UTI89)

2e-84

230) PSPTO_5344
( NP_795075.1 )

site-specific recombinase, phage integrase family

NC_004578
(Pseudomonas syringae DC3000)

3e-84

231) Ser39006_0951
( YP_008521333.1 )

protein of unknown function DUF4102

NC_022268
(Serratia sp. ATCC 39006)

3e-84

232) ECA2879
( YP_050970.1 )

integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

4e-84

233) EKO11_4021
( YP_005279654.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

4e-84

234) KO11_23100
( YP_006166928.1 )

site-specific recombinase, phage integrase family protein

NC_017660
(Escherichia coli KO11FL)

4e-84

235) LY180_22530
( YP_008567507.1 )

integrase

NC_022364
(Escherichia coli LY180)

4e-84

236) ECW_m4652
( YP_006127166.1 )

putative P4-type integrase

NC_017635
(Escherichia coli W)

4e-84

237) WFL_22655
( YP_006175953.1 )

site-specific recombinase, phage integrase family protein

NC_017664
(Escherichia coli W)

4e-84

238) ECO26_4069
( YP_003230994.1 )

integrase

NC_013361
(Escherichia coli 11368)

1e-83

239) Q7A_2891
( YP_006297314.1 )

integrase

NC_017857
(Methylophaga sp. JAM1)

2e-83

240) ECUMN_3322
( YP_002414004.1 )

integrase

NC_011751
(Escherichia coli UMN026)

2e-83

241) H650_18115
( YP_008109377.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

4e-83

242) ECO111_5079
( YP_003237359.1 )

putative integrase

NC_013364
(Escherichia coli 11128)

4e-83

243) ECO26_5300
( YP_003232178.1 )

integrase

NC_013361
(Escherichia coli 11368)

4e-83

244) ECO103_3550
( YP_003223418.1 )

integrase

NC_013353
(Escherichia coli 12009)

4e-83

245) ECO103_4929
( YP_003224745.1 )

integrase

NC_013353
(Escherichia coli 12009)

4e-83

246) ECABU_c32560
( YP_006107255.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

4e-83

247) int
( YP_859807.1 )

Int ( P4-type integrase)

NC_008563
(Escherichia coli APEC O1)

4e-83

248) CE10_3417
( YP_006145430.1 )

integrase

NC_017646
(Escherichia coli CE10)

4e-83

249) i14_3273
( YP_006155358.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

4e-83

250) i02_3273
( YP_006150439.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

4e-83

251) E2348C_3220
( YP_002330696.1 )

integrase

NC_011601
(Escherichia coli E2348/69)

4e-83

252) EcE24377A_3314
( YP_001464322.1 )

site-specific recombinase, phage integrase

NC_009801
(Escherichia coli E24377A)

4e-83

253) int
( YP_006141472.1 )

Integrase

NC_017644
(Escherichia coli NA114)

4e-83

254) ECS88_4720
( YP_002394207.1 )

integrase

NC_011742
(Escherichia coli S88)

4e-83

255) EC042_4610
( YP_006098876.1 )

integrase

NC_017626
(Escherichia coli 042)

5e-83

256) O3M_04655
( YP_006768605.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

5e-83

257) O3O_21040
( YP_006782711.1 )

Prophage integrase

NC_018661
(Escherichia coli 2009EL-2071)

5e-83

258) O3K_04610
( YP_006777642.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

5e-83

259) int
( YP_002404232.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

5e-83

260) UMNK88_3667
( YP_006135366.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

5e-83

261) EC042_3174
( YP_006097466.1 )

integrase

NC_017626
(Escherichia coli 042)

6e-83

262) EcolC_0747
( YP_001723746.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

6e-83

263) SARI_03312
( YP_001572286.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

7e-83

264) EKO11_4043
( YP_005279675.1 )

integrase family protein

NC_016902
(Escherichia coli KO11FL)

2e-82

265) KO11_22995
( YP_006166907.1 )

hypothetical protein

NC_017660
(Escherichia coli KO11FL)

2e-82

266) LY180_22420
( YP_008567485.1 )

integrase

NC_022364
(Escherichia coli LY180)

2e-82

267) WFL_22550
( YP_006175932.1 )

hypothetical protein

NC_017664
(Escherichia coli W)

2e-82

268) AvCA_40500
( YP_007894968.1 )

Phage integrase

NC_021149
(Azotobacter vinelandii CA)

4e-82

269) AvCA6_40500
( YP_007900017.1 )

Phage integrase

NC_021150
(Azotobacter vinelandii CA6)

4e-82

270) Avin_40500
( YP_002801161.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

4e-82

271) intB
( YP_004950346.1 )

prophage P4 integrase

NC_016514
(Enterobacter cloacae EcWSU1)

4e-82

272) CFSAN002050_22445
( YP_008262355.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

4e-82

273) Ent638_0463
( YP_001175202.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

5e-82

274) EC042_4741
( YP_006098991.1 )

integrase

NC_017626
(Escherichia coli 042)

6e-82

275) GBP346_A1152
( YP_002895874.1 )

site-specific recombinase, phage integrase family

NC_012695
(Burkholderia pseudomallei MSHR346)

7e-82

276) Entcl_3878
( YP_003943402.1 )

integrase family protein

NC_014618
(Enterobacter cloacae SCF1)

7e-82

277) Gbem_3253
( YP_002140046.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

9e-82

278) int
( YP_002389727.1 )

Prophage integrase

NC_011741
(Escherichia coli IAI1)

1e-81

279) PAGR_g3659
( YP_005994368.1 )

integrase

NC_017554
(Pantoea ananatis PA13)

1e-81

280) EAE_09085
( YP_004592016.1 )

prothage integrase

NC_015663
(Enterobacter aerogenes KCTC 2190)

1e-81

281) ECENHK_02620
( YP_006577041.1 )

phage integrase family site-specific recombinase

NC_018405
(Enterobacter cloacae ENHKU01)

2e-81

282) H650_18245
( YP_008109403.1 )

integrase

NC_021500
(Enterobacter sp. R4-368)

2e-81

283) EAM_3037
( YP_003540101.1 )

integrase

NC_013971
(Erwinia amylovora ATCC 49946)

2e-81

284) intB
( YP_003529741.1 )

integrase

NC_013961
(Erwinia amylovora CFBP1430)

2e-81

285) ECO55CA74_24440
( YP_006161977.1 )

Prophage integrase

NC_017656
(Escherichia coli RM12579)

2e-81

286) EBL_c34780
( YP_006321045.1 )

prophage P4 integrase

NC_017910
(Escherichia blattae DSM 4481)

2e-81

287) CFSAN002050_05850
( YP_008259116.1 )

integrase

NC_021818
(Salmonella enterica CFSAN002050)

2e-81

288) ECO103_5061
( YP_003224874.1 )

integrase

NC_013353
(Escherichia coli 12009)

5e-81

289) A225_0566
( YP_006496338.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

5e-81

290) A11S_2095
( YP_007643514.1 )

Integrase

NC_020812
(Micavibrio aeruginosavorus EPB)

1e-80

291) HYPMC_0824
( YP_004674631.1 )

Integrase

NC_015717
(Hyphomicrobium sp. MC1)

1e-80

292) ETAF_2789
( YP_005700383.1 )

Integrase

NC_017309
(Edwardsiella tarda FL6-60)

1e-80

293) ETAC_14745
( YP_007630430.1 )

Prophage integrase

NC_020796
(Edwardsiella tarda C07-087)

1e-80

294) SbBS512_E4814
( YP_001882951.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

9e-81

295) CKO_03532
( YP_001455048.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

2e-80

296) Gbem_2993
( YP_002139792.1 )

bacteriophage P4-type integrase

NC_011146
(Geobacter bemidjiensis Bem)

2e-80

297) W5S_1543
( YP_006282507.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

3e-80

298) Galf_2041
( YP_003847811.1 )

integrase family protein

NC_014394
(Gallionella capsiferriformans ES-2)

3e-80

299) KOX_09480
( YP_005017861.1 )

phage integrase family protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

4e-80

300) Xaut_3444
( YP_001418330.1 )

integrase family protein

NC_009720
(Xanthobacter autotrophicus Py2)

1e-79

301) DVU1527
( YP_010746.1 )

phage integrase site specific recombinase

NC_002937
(Desulfovibrio vulgaris Hildenborough)

1e-79

302) Deval_1767
( YP_005702556.1 )

integrase family protein

NC_017310
(Desulfovibrio vulgaris RCH1)

1e-79

303) Neut_1125
( YP_747345.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

3e-79

304) Neut_1755
( YP_747954.1 )

phage integrase family protein

NC_008344
(Nitrosomonas eutropha C91)

3e-79

305) O3M_22875
( YP_006772189.1 )

Prophage integrase

NC_018650
(Escherichia coli 2009EL-2050)

3e-79

306) O3K_22970
( YP_006781250.1 )

Prophage integrase

NC_018658
(Escherichia coli 2011C-3493)

3e-79

307) int
( YP_002405550.1 )

Prophage integrase

NC_011748
(Escherichia coli 55989)

3e-79

308) SFxv_3245
( YP_005728584.1 )

Site-specific recombinase, phage integrase family protein

NC_017328
(Shigella flexneri 2002017)

3e-79

309) S4822
( NP_838459.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

3e-79

310) SF2964
( NP_708738.1 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

3e-79

311) SPC_4619
( YP_002640109.1 )

integrase

NC_012125
(Salmonella enterica RKS4594)

4e-79

312) Ser39006_3432
( YP_008523814.1 )

integrase family protein

NC_022268
(Serratia sp. ATCC 39006)

4e-79

313) YpsIP31758_0809
( YP_001399793.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

5e-79

314) Pecwa_1669
( YP_003259066.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

6e-79

315) NAL212_1009
( YP_004294089.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

8e-79

316) A1122_08715
( YP_005521414.1 )

integrase

NC_017168
(Yersinia pestis A1122)

1e-78

317) YPA_2939
( YP_652846.1 )

integrase

NC_008150
(Yersinia pestis Antiqua)

1e-78

318) intB
( YP_002348329.1 )

integrase

NC_003143
(Yersinia pestis CO92)

1e-78

319) intB
( YP_005506227.1 )

integrase

NC_017154
(Yersinia pestis D106004)

1e-78

320) intB
( YP_005510085.1 )

integrase

NC_017160
(Yersinia pestis D182038)

1e-78

321) YPN_0651
( YP_646583.1 )

integrase

NC_008149
(Yersinia pestis Nepal516)

1e-78

322) intB
( YP_003569204.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

1e-78

323) YpsIP31758_3540
( YP_001402494.1 )

phage integrase family site specific recombinase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-78

324) intB
( NP_992037.1 )

integrase

NC_005810
(Yersinia pestis 91001)

2e-78

325) YpAngola_A4051
( YP_001608341.1 )

phage integrase family site specific recombinase

NC_010159
(Yersinia pestis Angola)

2e-78

326) intB
( NP_668085.1 )

integrase

NC_004088
(Yersinia pestis KIM)

2e-78

327) KPN2242_01530
( YP_005952795.1 )

site-specific recombinase, phage integrase family protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

2e-78

328) S70_06120
( YP_006215787.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

2e-78

329) AHML_14825
( YP_008044080.1 )

phage integrase

NC_021290
(Aeromonas hydrophila ML09-119)

3e-78

330) intB
( YP_001242175.1 )

P4-like integrase

NC_009485
(Bradyrhizobium sp. BTAi1)

3e-78

331) KPK_4978
( YP_002240755.1 )

phage integrase family site-specific recombinase

NC_011283
(Klebsiella pneumoniae 342)

3e-78

332) S70_13465
( YP_006217222.1 )

Prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

3e-78

333) YPK_3676
( YP_001722396.1 )

integrase family protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

5e-78

334) Mpe_A1087
( YP_001020283.1 )

prophage CP4-like integrase

NC_008825
(Methylibium petroleiphilum PM1)

1e-77

335) SFxv_4606
( YP_005729812.1 )

putative P4-type integrase

NC_017328
(Shigella flexneri 2002017)

1e-77

336) S4839
( NP_839619.1 )

P4-type integrase

NC_004741
(Shigella flexneri 2457T)

1e-77

337) SF4224
( NP_709936.2 )

P4-type integrase

NC_004337
(Shigella flexneri 301)

1e-77

338) SFV_4227
( YP_691515.1 )

P4-type integrase

NC_008258
(Shigella flexneri 8401)

1e-77

339) YPDSF_3248
( YP_001164578.1 )

integrase

NC_009381
(Yersinia pestis Pestoides F)

7e-78

340) Tbd_0943
( YP_314701.1 )

integrase prophage protein

NC_007404
(Thiobacillus denitrificans ATCC 25259)

9e-78

341) Dd586_0881
( YP_003332472.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

9e-78

342) KN400_0440
( YP_006889485.1 )

integrase, bacteriophage P4-type

NC_017454
(Geobacter sulfurreducens KN400)

2e-77

343) SYN_01916
( YP_461774.1 )

DNA integration/recombination/inversion protein

NC_007759
(Syntrophus aciditrophicus SB)

2e-77

344) intB
( YP_005625501.1 )

integrase

NC_017265
(Yersinia pestis Harbin 35)

2e-77

345) Ppro_2300
( YP_901965.1 )

phage integrase family protein

NC_008609
(Pelobacter propionicus DSM 2379)

8e-77

346) PputW619_4347
( YP_001751196.1 )

integrase family protein

NC_010501
(Pseudomonas putida W619)

2e-76

347) SARI_03082
( YP_001572064.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

2e-76

348) Dda3937_03406
( YP_003881783.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

2e-76

349) C380_06330
( YP_006853614.1 )

phage integrase

NC_018708
(Acidovorax sp. KKS102)

3e-76

350) intB
( YP_002153152.1 )

prophage integrase

NC_010554
(Proteus mirabilis HI4320)

3e-76

351) NH8B_1979
( YP_004847208.1 )

phage integrase family protein

NC_016002
(Pseudogulbenkiania sp. NH8B)

4e-76

352) intB
( YP_001143574.1 )

phage integrase

NC_009348
(Aeromonas salmonicida A449)

4e-76

353) MU9_135
( YP_007503554.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

5e-76

354) LHK_01566
( YP_002795563.1 )

integrase

NC_012559
(Laribacter hongkongensis HLHK9)

5e-76

355) intB
( YP_005802313.1 )

protein intB

NC_017390
(Erwinia pyrifoliae DSM 12163)

5e-76

356) EpC_14570
( YP_002648472.1 )

phage integrase family protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

5e-76

357) intB
( YP_002405686.1 )

integrase; KpLE2 phage-like element

NC_011748
(Escherichia coli 55989)

5e-76

358) SMD_1781
( YP_006184502.1 )

integrase

NC_017671
(Stenotrophomonas maltophilia D457)

6e-76

359) LHK_01737
( YP_002795731.1 )

CP4 integrase protein

NC_012559
(Laribacter hongkongensis HLHK9)

2e-75

360) PC1_0871
( YP_003016457.1 )

integrase family protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-75

361) Dret_1610
( YP_003198472.1 )

integrase family protein

NC_013223
(Desulfohalobium retbaense DSM 5692)

2e-75

362) Selin_1494
( YP_004112783.1 )

integrase family protein

NC_014836
(Desulfurispirillum indicum S5)

2e-75

363) plu4477
( NP_931643.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-75

364) NCGM2_0360
( YP_005978635.1 )

site-specific recombinase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-75

365) A11S_1005
( YP_007642445.1 )

phage integrase

NC_020812
(Micavibrio aeruginosavorus EPB)

3e-75

366) Ent638_2887
( YP_001177603.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

4e-75

367) AMBLS11_09695
( YP_006824971.1 )

prophage CP4-like integrase

NC_018692
(Alteromonas macleodii Black Sea 11)

6e-75

368) MU9_117
( YP_007503536.1 )

prophage integrase

NC_020418
(Morganella morganii KT)

1e-74

369) SEEB0189_19950
( YP_008310270.1 )

integrase

NC_021844
(Salmonella enterica CFSAN000189)

1e-74

370) Pcar_1823
( YP_006717564.1 )

integrase, bacteriophage P4-type

NC_007498
(Pelobacter carbinolicus DSM 2380)

7e-75

371) Cpha266_1627
( YP_912072.1 )

phage integrase family protein

NC_008639
(Chlorobium phaeobacteroides DSM 266)

2e-74

372) ECOK1_4788
( YP_006103840.1 )

site-specific recombinase, phage integrase family

NC_017628
(Escherichia coli IHE3034)

2e-74

373) SNSL254_A4836
( YP_002043726.1 )

integrase

NC_011080
(Salmonella enterica SL254)

2e-74

374) SN31241_8570
( YP_008358775.1 )

Integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

2e-74

375) intB
( YP_003001820.1 )

intB

NC_012892
(Escherichia coli BL21(DE3))

2e-74

376) intB
( YP_003056695.1 )

integrase

NC_012971
(Escherichia coli BL21(DE3))

2e-74

377) EcDH1_3727
( YP_006093621.1 )

integrase family protein

NC_017625
(Escherichia coli DH1)

2e-74

378) intB
( YP_006131525.1 )

site-specific recombinase

NC_017638
(Escherichia coli DH1)

2e-74

379) ECBD_3766
( YP_003037938.1 )

integrase

NC_012947
(Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG)

2e-74

380) ETEC_4611
( YP_006118149.1 )

putative phage integrase

NC_017633
(Escherichia coli ETEC H10407)

2e-74

381) intB
( YP_002410602.1 )

putative integrase; KpLE2 phage-like element

NC_011750
(Escherichia coli IAI39)

2e-74

382) intB
( YP_001733029.1 )

KpLE2 phage-like element; integrase

NC_010473
(Escherichia coli K-12)

2e-74

383) intB
( YP_492408.1 )

integrase

NC_007779
(Escherichia coli K-12)

2e-74

384) intB
( YP_006171360.1 )

Prophage P4 integrase (Int(P4))

NC_017663
(Escherichia coli P12b)

2e-74

385) intB
( YP_003047305.1 )

putative integrase

NC_012967
(Escherichia coli REL606)

2e-74

386) intB
( YP_002415396.1 )

putative integrase; KpLE2 phage-like element

NC_011751
(Escherichia coli UMN026)

2e-74

387) GBP346_A3075
( YP_002897757.1 )

integrase

NC_012695
(Burkholderia pseudomallei MSHR346)

3e-74

388) ENC_43890
( YP_007847599.1 )

Integrase

NC_021046
(Enterobacter cloacae NCTC 9394)

3e-74

389) intB
( YP_002400869.1 )

putative integrase; KpLE2 phage-like element

NC_011745
(Escherichia coli ED1a)

3e-74

390) Varpa_2722
( YP_004155031.1 )

integrase family protein

NC_014931
(Variovorax paradoxus EPS)

3e-74

391) SSPA3984
( YP_002144818.1 )

integrase

NC_011147
(Salmonella enterica AKU12601)

4e-74

392) int
( YP_153333.1 )

integrase

NC_006511
(Salmonella enterica ATCC 9150)

4e-74

393) Pecwa_0718
( YP_003258145.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-74

394) Galf_1827
( YP_003847601.1 )

integrase family protein

NC_014394
(Gallionella capsiferriformans ES-2)

6e-74

395) intB
( YP_007493033.1 )

putative prophage P4 integrase

NC_020409
(Desulfovibrio piezophilus C1TLV30)

6e-74

396) NAL212_2545
( YP_004295511.1 )

integrase family protein

NC_015222
(Nitrosomonas sp. AL212)

1e-73

397) KPHS_05400
( YP_005224840.1 )

putative P4-type integrase

NC_016845
(Klebsiella pneumoniae HS11286)

1e-73

398) N559_4601
( YP_008427480.1 )

P4-type integrase

NC_022082
(Klebsiella pneumoniae JM45)

1e-73

399) intA_4
( YP_008574436.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

7e-74

400) STY4821
( NP_458899.1 )

integrase

NC_003198
(Salmonella enterica CT18)

9e-74

401) t4518
( NP_808103.1 )

integrase

NC_004631
(Salmonella enterica Ty2)

9e-74

402) TY21A_22985
( YP_007928753.1 )

integrase

NC_021176
(Salmonella enterica Ty21a)

9e-74

403) GM18_2022
( YP_004198761.1 )

integrase family protein

NC_014973
(Geobacter sp. M18)

1e-73

404) ETAE_3092
( YP_003297134.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

3e-73

405) GM18_2884
( YP_004199604.1 )

integrase family protein

NC_014973
(Geobacter sp. M18)

3e-73

406) ECO26_5435
( YP_003232308.1 )

integrase

NC_013361
(Escherichia coli 11368)

4e-73

407) Dd1591_3702
( YP_003005986.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

4e-73

408) ECABU_c49370
( YP_006108845.1 )

prophage P4 integrase

NC_017631
(Escherichia coli ABU 83972)

6e-73

409) intB
( YP_410419.1 )

prophage P4 integrase

NC_007613
(Shigella boydii Sb227)

1e-72

410) c5371
( NP_757219.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

2e-72

411) i14_4891
( YP_006156950.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

2e-72

412) i02_4891
( YP_006152031.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

2e-72

413) Dd703_3541
( YP_002989121.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

2e-72

414) EcolC_1237
( YP_001724230.1 )

integrase family protein

NC_010468
(Escherichia coli ATCC 8739)

2e-72

415) Nit79A3_1833
( YP_004695037.1 )

integrase

NC_015731
(Nitrosomonas sp. Is79A3)

2e-72

416) Glov_1135
( YP_001951377.1 )

integrase

NC_010814
(Geobacter lovleyi SZ)

3e-72

417) NH8B_1001
( YP_004846247.1 )

prophage CP4-like integrase

NC_016002
(Pseudogulbenkiania sp. NH8B)

5e-72

418) Despr_0274
( YP_004193749.1 )

integrase family protein

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-71

419) RSc1871
( NP_519992.1 )

integrase prophage protein

NC_003295
(Ralstonia solanacearum GMI1000)

3e-71

420) MADE_1010570
( YP_004427250.1 )

integrase

NC_011138
(Alteromonas macleodii Deep ecotype)

3e-71

421) Dd586_3778
( YP_003335314.1 )

integrase family protein

NC_013592
(Dickeya dadantii Ech586)

1e-70

422) intZ
( YP_002927401.1 )

CPZ-55 prophage; putative integrase

NC_012759
(Escherichia coli K-12)

2e-70

423) intZ
( NP_416937.2 )

CPZ-55 prophage; predicted integrase

NC_000913
(Escherichia coli K12)

2e-70

424) intZ
( YP_001731371.1 )

CPZ-55 prophage; integrase

NC_010473
(Escherichia coli K-12)

3e-70

425) Ppro_1315
( YP_900993.1 )

phage integrase family protein

NC_008609
(Pelobacter propionicus DSM 2379)

2e-70

426) GM21_0997
( YP_003020820.1 )

integrase family protein

NC_012918
(Geobacter sp. M21)

3e-70

427) Tbd_2005
( YP_315763.1 )

cp4-like integrase

NC_007404
(Thiobacillus denitrificans ATCC 25259)

4e-70

428) PAU_03981
( YP_003042810.1 )

p4 integrase-like protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

4e-70

429) intC
( YP_001352573.1 )

prophage integrase

NC_009659
(Janthinobacterium sp. Marseille)

5e-70

430) RCFBP_11461
( YP_003745377.1 )

prophage integrase

NC_014307
(Ralstonia solanacearum CFBP2957)

5e-70

431) Fraau_1988
( YP_005378057.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

8e-70

432) amb0488
( YP_419851.1 )

integrase

NC_007626
(Magnetospirillum magneticum AMB-1)

2e-69

433) intB
( YP_003469249.1 )

KpLE2 phage-like element; P4-like integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

3e-69

434) SBO_4322
( YP_410566.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

4e-69

435) lpa_00270
( YP_003617389.1 )

hypothetical protein

NC_014125
(Legionella pneumophila 2300/99 Alcoy)

5e-69

436) LPC_0202
( YP_001249546.1 )

integrase

NC_009494
(Legionella pneumophila Corby)

5e-69

437) Pecwa_1766
( YP_003259159.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

5e-69

438) SbBS512_E4662
( YP_001882825.1 )

site-specific recombinase, phage integrase family protein

NC_010658
(Shigella boydii CDC 3083-94)

5e-69

439) intB
( YP_003468561.1 )

prophage like-integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

9e-69

440) SG1638
( YP_455318.1 )

phage integrase

NC_007712
(Sodalis glossinidius morsitans)

1e-68

441) Fraau_3064
( YP_005379074.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

1e-68

442) SSON53_18230
( YP_005458150.1 )

P4-type integrase

NC_016822
(Shigella sonnei 53G)

8e-69

443) Acife_3075
( YP_004785473.1 )

integrase family protein

NC_015942
(Acidithiobacillus ferrivorans SS3)

9e-69

444) int
( YP_160175.1 )

integrase

NC_006513
(Aromatoleum aromaticum EbN1)

2e-68

445) Dsui_1791
( YP_005028016.1 )

Integrase

NC_016616
(Dechlorosoma suillum PS)

2e-68

446) Pecwa_0447
( YP_003257894.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-68

447) Pecwa_1586
( YP_003258984.1 )

integrase

NC_013421
(Pectobacterium wasabiae WPP163)

3e-68

448) YE105_C1329
( YP_004297528.1 )

putative cp4-like integrase protein

NC_015224
(Yersinia enterocolitica 105.5R(r))

3e-68

449) W5S_1599
( YP_006282563.1 )

Prophage P4 integrase

NC_017845
(Pectobacterium sp. SCC3193)

4e-68

450) W5S_0459
( YP_006281457.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

5e-68

451) intB
( YP_003713602.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

5e-68

452) ECA0835
( YP_048945.1 )

prophage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

6e-68

453) Nmul_A2184
( YP_412868.1 )

Phage integrase

NC_007614
(Nitrosospira multiformis ATCC 25196)

1e-67

454) Ent638_3101
( YP_001177816.1 )

phage integrase family protein

NC_009436
(Enterobacter sp. 638)

1e-67

455) ECL_03606
( YP_003614089.1 )

integrase family protein

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-67

456) A464_4477
( YP_008325069.1 )

Integrase

NC_021870
(Salmonella bongori N268-08)

4e-67

457) intB
( YP_003712791.1 )

KpLE2 phage-like element; P4-like integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-67

458) NMBM01240355_1501
( YP_005902124.1 )

Prophage CP4-57 integrase

NC_017517
(Neisseria meningitidis M01-240355)

6e-67

459) SBO_4174
( YP_410429.1 )

P4-type integrase

NC_007613
(Shigella boydii Sb227)

1e-66

460) NMV_0809
( YP_005878233.1 )

putative prophage integrase

NC_017501
(Neisseria meningitidis 8013)

2e-66

461) M301_1146
( YP_003674107.1 )

integrase family protein

NC_014207
(Methylotenera versatilis 301)

1e-65

462) CFSAN001992_19740
( YP_007473660.1 )

phage integrase family protein

NC_020307
(Salmonella enterica CFSAN001992)

1e-65

463) SNSL254_A2952
( YP_002041998.1 )

phage integrase family protein

NC_011080
(Salmonella enterica SL254)

1e-65

464) SN31241_38450
( YP_008361760.1 )

Prophage CP4-57 integrase

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-65

465) ETAE_2742
( YP_003296788.1 )

integrase

NC_013508
(Edwardsiella tarda EIB202)

2e-65

466) Tint_0383
( YP_003642124.1 )

integrase family protein

NC_014153
(Thiomonas intermedia K12)

2e-65

467) ETA_03770
( YP_001906331.1 )

P4-type integrase

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-65

468) Dsui_0218
( YP_005026479.1 )

Integrase

NC_016616
(Dechlorosoma suillum PS)

6e-65

469) int
( YP_004730693.1 )

bacteriophage integrase

NC_015761
(Salmonella bongori NCTC 12419)

1e-64

470) PAU_03975
( YP_003042804.1 )

prophage p4 integrase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-65

471) intA1
( NP_992430.1 )

prophage CP4-57 integrase

NC_005810
(Yersinia pestis 91001)

7e-65

472) intA
( NP_670380.1 )

prophage CP4-57 integrase

NC_004088
(Yersinia pestis KIM)

7e-65

473) Msip34_2834
( YP_003056834.1 )

integrase family protein

NC_012972
(Methylovorus glucosetrophus SIP3-4)

2e-64

474) intB
( YP_003714347.1 )

integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-64

475) SLG_25940
( YP_004835726.1 )

putative integrase

NC_015976
(Sphingobium sp. SYK-6)

4e-64

476) Dda3937_01301
( YP_003881181.1 )

Integrase

NC_014500
(Dickeya dadantii 3937)

1e-63

477) PCA10_49420
( YP_008105279.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

1e-63

478) LPO_0155
( YP_006504236.1 )

Integrase

NC_018139
(Legionella pneumophila Lorraine)

2e-63

479) Glov_3112
( YP_001953338.1 )

integrase

NC_010814
(Geobacter lovleyi SZ)

2e-63

480) intA
( YP_003521207.1 )

IntA

NC_013956
(Pantoea ananatis LMG 20103)

2e-63

481) Dtpsy_1577
( YP_002553036.1 )

integrase family protein

NC_011992
(Acidovorax ebreus TPSY)

3e-63

482) XALc_1804
( YP_003376288.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

3e-63

483) Dd703_3554
( YP_002989134.1 )

integrase family protein

NC_012880
(Dickeya dadantii Ech703)

3e-63

484) EbC_39600
( YP_003743338.1 )

integrase

NC_014306
(Erwinia billingiae Eb661)

3e-63

485) Dd1591_3717
( YP_003005999.1 )

integrase family protein

NC_012912
(Dickeya zeae Ech1591)

4e-63

486) Fraau_2605
( YP_005378631.1 )

Integrase

NC_017033
(Frateuria aurantia DSM 6220)

2e-62

487) RPC_0628
( YP_530520.1 )

phage integrase

NC_007925
(Rhodopseudomonas palustris BisB18)

4e-62

488) Msil_1557
( YP_002361869.1 )

integrase family protein

NC_011666
(Methylocella silvestris BL2)

1e-61

489) XCV2217
( YP_363948.1 )

phage-related integrase

NC_007508
(Xanthomonas campestris 85-10)

9e-62

490) ELI_04005
( YP_457690.1 )

cp4-like integrase protein

NC_007722
(Erythrobacter litoralis HTCC2594)

2e-61

491) HEAR0701
( YP_001099022.1 )

integrase

NC_009138
(Herminiimonas arsenicoxydans )

3e-61

492) Pmen_3996
( YP_001189475.1 )

phage integrase family protein

NC_009439
(Pseudomonas mendocina ymp)

4e-61

493) ybl123
( YP_003000524.1 )

ybl123

NC_012892
(Escherichia coli BL21(DE3))

4e-61

494) UMNK88_5213
( YP_006136842.1 )

phage integrase

NC_017641
(Escherichia coli UMNK88)

5e-61

495) mll5763
( NP_106365.1 )

symbiosis island integrase

NC_002678
(Mesorhizobium loti MAFF303099)

8e-61

496) Sala_0444
( YP_615498.1 )

phage integrase

NC_008048
(Sphingopyxis alaskensis RB2256)

2e-60

497) PP1Y_AT14494
( YP_004534168.1 )

phage integrase

NC_015580
(Novosphingobium sp. PP1Y)

4e-60

498) SG2104
( YP_455784.1 )

phage integrase

NC_007712
(Sodalis glossinidius morsitans)

3e-60

499) PCC21_004050
( YP_006645061.1 )

integrase

NC_018525
(Pectobacterium carotovorum PCC21)

5e-59

500) Dd703_3223
( YP_002988808.1 )

integrase

NC_012880
(Dickeya dadantii Ech703)

8e-59

501) SBOV27691
( YP_008506597.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

9e-58

502) LFML04_0012
( YP_006765226.1 )

phage integrase family protein

NC_018649
(Leptospirillum ferriphilum ML-04)

2e-57

503) SBOV45841
( YP_008508356.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

2e-57

504) XCV2615
( YP_364346.1 )

integrase

NC_007508
(Xanthomonas campestris 85-10)

4e-57

505) PFLU1878
( YP_002871513.1 )

putative integrase

NC_012660
(Pseudomonas fluorescens SBW25)

4e-57

506) Smlt0056
( YP_001969986.1 )

integrase

NC_010943
(Stenotrophomonas maltophilia K279a)

6e-57

507) XALc_1632
( YP_003376121.1 )

phage-related integrase

NC_013722
(Xanthomonas albilineans GPE PC73)

5e-56

508) xccb100_1868
( YP_001903273.1 )

hypothetical protein

NC_010688
(Xanthomonas campestris B100)

5e-53

509) MICA_2176
( YP_004866484.1 )

phage integrase family protein

NC_016026
(Micavibrio aeruginosavorus ARL-13)

5e-53

510) MCA0676
( YP_113189.1 )

phage integrase site specific recombinase

NC_002977
(Methylococcus capsulatus Bath)

3e-47

511) int
( YP_158425.1 )

phage-related integrase

NC_006513
(Aromatoleum aromaticum EbN1)

3e-35

• Sequence Alignments

1) intL in NC_002655


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

2) ECs4534 in NC_002695


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

3) intL in NC_013008


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

4) ECO55CA74_21080 in NC_017656


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

5) CDCO157_4272 in NC_017906


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

6) ECH74115_5032 in NC_011353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  649 bits (2453),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  25   MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  84
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  85   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  144
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  145  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  204
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  205  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  264
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  265  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  324
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  325  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  384
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  385  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  417
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

7) intL in NC_013941


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  649 bits (2453),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%)

Query  25   MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  84
            MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  85   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  144
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  145  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  204
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  205  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  264
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  265  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  324
            RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  325  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  384
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  385  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  417
            SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

8) ECABU_c41260 in NC_017631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  633 bits (2393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/390 (97%), Positives = 387/390 (99%), Gaps = 0/390 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKE+PYKLAD+GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI+LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GRNDPRKPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLT  390
            +IRGTYNHAQYLDGRREMMQWYADYI+SL+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

9) intC in NC_017652


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  633 bits (2393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/390 (97%), Positives = 387/390 (99%), Gaps = 0/390 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKE+PYKLAD+GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI+LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GRNDPRKPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLT  390
            +IRGTYNHAQYLDGRREMMQWYADYI+SL+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

10) intC in NC_017651


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  633 bits (2393),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/390 (97%), Positives = 387/390 (99%), Gaps = 0/390 (0%)

Query  1    MALTDVKVKTAKPKEKPYKLADSGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTDVKVKTAKPKE+PYKLAD+GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQSKADRWSLRYR  120
            LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI+LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGFNSAWIETQLAHVDKN  360
            GRNDPRKPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIGSLT  390
            +IRGTYNHAQYLDGRREMMQWYADYI+SL+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

11) ETEC_3899 in NC_017633


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  631 bits (2385),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 374/389 (97%), Positives = 384/389 (99%), Gaps = 0/389 (0%)

Query  1    MALTDIKVKTAKPKEKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPKE+PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKILAAGGNPGVAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARKILAAGG+PG AKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLACALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLA ALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIALFKQLEPITKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVIALFKQLEPI+KHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSL  389
            +IRGTYNHAQYLDGRREMMQWYADYIDSL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

12) O3M_00580 in NC_018650


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/391 (97%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

13) O3O_25120 in NC_018661


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/391 (97%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

14) O3K_00550 in NC_018658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  631 bits (2384),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/391 (97%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

15) ECD_03516 in NC_012971


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSL+NTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

16) ybl160 in NC_012892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSL+NTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

17) ECBD_0066 in NC_012947


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSL+NTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

18) ECB_03516 in NC_012967


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSL+NTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

19) intC in NC_004431


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLQNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSL+NTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

20) SSON_3744 in NC_007384


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  630 bits (2380),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAGAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LA+AREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

21) ECIAI39_4188 in NC_011750


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  629 bits (2378),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA Q+SLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

22) CE10_4227 in NC_017646


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  629 bits (2378),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/391 (96%), Positives = 385/391 (99%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQISLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA Q+SLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

23) intC in NC_008258


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  625 bits (2362),  Expect = 1e-180, Method: Compositional matrix adjust.
 Identities = 373/391 (96%), Positives = 382/391 (98%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPM LLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQAIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GRNDPRKPISKESINQ IELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRDTYNHALYLDGRREMMQWYADYIDSLSS  391
            SIR+TYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

24) SFxv_4026 in NC_017328


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  624 bits (2357),  Expect = 3e-180, Method: Compositional matrix adjust.
 Identities = 371/390 (96%), Positives = 381/390 (98%), Gaps = 0/390 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++ D+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVTL
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            ADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ KADRWSLRYRD
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
            EIIDTFEKDIFPYIGKRPIAEIKPM LLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGVR
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            TQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFIG
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSS  400
            IRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

25) S4835 in NC_004741


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  624 bits (2357),  Expect = 3e-180, Method: Compositional matrix adjust.
 Identities = 371/390 (96%), Positives = 381/390 (98%), Gaps = 0/390 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++ D+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVTL
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            ADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ KADRWSLRYRD
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
            EIIDTFEKDIFPYIGKRPIAEIKPM LLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGVR
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            TQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFIG
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSS  400
            IRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

26) SF3698 in NC_004337


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  624 bits (2357),  Expect = 3e-180, Method: Compositional matrix adjust.
 Identities = 371/390 (96%), Positives = 381/390 (98%), Gaps = 0/390 (0%)

Query  11   GINDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTL  70
            ++ D+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVTL
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  71   ADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQLKADRWSLRYRD  130
            ADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ KADRWSLRYRD
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  131  EIIDTFEKDIFPYIGKRPIAEIKPMKLLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  190
            EIIDTFEKDIFPYIGKRPIAEIKPM LLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  191  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVR  250
            GRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGVR
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  251  TQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIG  310
            TQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFIG
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  311  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  370
            RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  371  IRGTYNHALYLDGRREMMQWYADYIDSLSS  400
            IRGTYNHA YLDGRREMMQWYADYIDSLS 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

27) ECP_3765 in NC_008253


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  624 bits (2357),  Expect = 3e-180, Method: Compositional matrix adjust.
 Identities = 367/391 (94%), Positives = 383/391 (98%), Gaps = 0/391 (0%)

Query  1    MALTDIKVKTVKPKDKPYKLADGSGMYLLINTNGSKYWRMKYRFAGKEKMLSLGVYPDVT  60
            MALTD+KVKT KPK++PYKLADG+GMYLLIN+NGSKYWRMKYRFAGKEKMLS+GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKRSEARKILAAGGDPGEVKKEEKIALQMSLKNTFEAIAREWHRSKADRWSLRYR  120
            LADAR+KRSEARKILAAGGDPGE KKEEKIALQMSLKNTFEA+AREWH++KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYLGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPY+GKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFAHWEDINLEKKLWEIPAEVMKMKRPHIVPLSEQVITLFKQLEPISKHYPLVFI  300
            RTQELRFAHWEDI++E KLWEIPAEVMKMKRPHIVP SEQVI+LFKQLEPISKH PLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELIGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GRNDPRKPISKESINQVIEL+GYKGRLTGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLAS  391
            SIRGTYNHAQYLDGRREMMQWYADYIDSL+ 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

28) SSON53_21650 in NC_016822


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  551 bits (2078),  Expect = 2e-158, Method: Compositional matrix adjust.
 Identities = 327/341 (96%), Positives = 337/341 (99%), Gaps = 0/341 (0%)

Query  1    MALTDIKVKTAKPKDKPYKLADGGGMYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVT  60
            MALTD+KVKTAKPK++PYKLADGGGMYLLIN+NGSKYWRMKYRFAGKEKMLSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRSEARKLLAAGGDPGEAKKEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYR  120
            LADAREKRSEARK+LAAGGDPGEAKKEEKIA QMSLKNTFEA+AREWHQ+KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLNDLAGYTGSIITKTATQIIMLTGV  240
            TGRADYNPAPDLASALATPKKVHFPFLTANELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFETKLWEIPAEVMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFI  300
            RTQELRFA+WEDIDFE+KLWEIPAEVMKMKRPHIVP SEQVI LFKQLEPISKHHPLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILR  341
            GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTIL+
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILH  341

29) YE4117 in NC_008800


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  539 bits (2035),  Expect = 8e-155, Method: Compositional matrix adjust.
 Identities = 300/390 (77%), Positives = 358/390 (92%), Gaps = 0/390 (0%)

Query  1    MKLNARQVETAKQKEKSYKLTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVS  60
            M L   +V TAK KE++YKL+DGGG+YL ++A+G+KYWRMKYR++GKEK +++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKRETAKKLLASGTDPGETKKAEKLAQKIAMENSFELMAREWHKNKADRWSLRYR  120
            LADAR+KR  A+K+LA+G DPGE+KK EK+A ++++ N+FE +AREWH+ KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIDTFEKDIFPFIGRRPIADIKPMELLETLKRMEKRGALEKMRKVRQRCGEVFRYAII  180
            +EIIDTFEKDIFP+IG+RPIA+IKPMELLE+L++MEKRGALEKMRKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAGALQTHKKQHLPFLTAQELPYFLRDLAGYTGSIITKTATRIIMLTGV  240
            TGRA+YNPAPDLA+AL T KK H+PFLTA+ELP FL DLAGYTGSIITKTAT+IIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDLDLDKGLWHIPPEHMKMKRPHVVPLSIQVITAFKQLHPLTHHYPLVFI  300
            RTQELRFA+WED+D++  LW+IP+E MKMKRPH+VP S QVI+ FKQL+P++ H PLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDHRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGYNSAWIETQLAHVDKN  360
            GRND RKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG+NSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRQEMLQWYSDYMDSLE  390
            SIRGTYNHAQYLDGR+EM+QWY+DY+DSL 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

30) YPTB3886 in NC_006155


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  525 bits (1981),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 320/389 (83%), Positives = 364/389 (94%), Gaps = 0/389 (0%)

Query  1    MPLTDIKVKTAKPIDKAYKLTDGGGMYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVS  60
            M+LTD+KVKTAKP +++YKL+DGGGMYLL+++NGSKYWR+KYRF GKEKMLSIGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKRDEARKVLAAGGDPGEVKKADKLAQKLSSENTFEAIAREWHKQKADRWSLRYR  120
            LADAR+KR EARK+LAAGGDPGE KK +K+A ++S  NTFEA+AREWH+ KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYLGRRPIAEIKPMelletlrrlekrGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPY+G+RPIAEIKPMELLE+LR++EKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELP F+ DLAGYTGS+ITKTATQIIM TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFEKRLWEIPSEVIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFI  300
            RTQELRFA+WEDIDFE +LWEIP+EV+KMKRPHIVP SEQV+ LF+ L PI+   PLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRAKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAHYLEGRREMMQWYGDNLESM  389
            +IRGTYNHA+YL+GRREMMQWY+D ++S+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

31) YPTS_4103 in NC_010634


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  525 bits (1981),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 320/389 (83%), Positives = 364/389 (94%), Gaps = 0/389 (0%)

Query  1    MPLTDIKVKTAKPIDKAYKLTDGGGMYLLVKPNGSKYWRLKYRFVGKEKMLSIGVYPDVS  60
            M+LTD+KVKTAKP +++YKL+DGGGMYLL+++NGSKYWR+KYRF GKEKMLSIGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKRDEARKVLAAGGDPGEVKKADKLAQKLSSENTFEAIAREWHKQKADRWSLRYR  120
            LADAR+KR EARK+LAAGGDPGE KK +K+A ++S  NTFEA+AREWH+ KADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYLGRRPIAEIKPMelletlrrlekrGALEKMRKVRQRCGEVFRYAIV  180
            DEIIDTFEKDIFPY+G+RPIAEIKPMELLE+LR++EKRGALEKMRKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELP F+ DLAGYTGS+ITKTATQIIM TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDIDFEKRLWEIPSEVIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFI  300
            RTQELRFA+WEDIDFE +LWEIP+EV+KMKRPHIVP SEQV+ LF+ L PI+   PLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRAKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAHYLEGRREMMQWYGDNLESM  389
            +IRGTYNHA+YL+GRREMMQWY+D ++S+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

32) EAE_06555 in NC_015663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  525 bits (1980),  Expect = 2e-150, Method: Compositional matrix adjust.
 Identities = 315/389 (81%), Positives = 358/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLSDGGGLYLEVATSGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  +V TAKPKE+PYKL+DGGG+YL + ++GS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaeardkreaakkVLAAGNDPGEVKKAEKIAQKLGFENTFEAIAREWHQVRADRWSLRYR  120
            LA+AR+KR  A+K+LAAG DPGE KK EKIA ++++ NTFEA+AREWHQ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIDTFEKDVFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            +EIIDTFEKD+FPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLKDLAGYTGSIITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DLAGYTGSIITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVALFESLKPITGLYPLVFI  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ALF  L PI+   PLVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESINQVIELLGYKGRVTGHGFRHTMSTILHEEGFDSAWIETQLAHVDKN  360
            GRND  KPISKESINQVIELLGYKGR+TGHGFRHTMSTILHE+GF+SAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGAYNHAQYLDGRKEMMQWYADYITHL  389
            +IRG+YNHAQYLDGR+EMMQWYADYI  L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

33) P12B_c3788 in NC_017663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  518 bits (1956),  Expect = 1e-148, Method: Compositional matrix adjust.
 Identities = 317/388 (82%), Positives = 359/388 (93%), Gaps = 0/388 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYKNTFEAIAREWHQLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++ KNTFEA+AREWHQ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLAGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DLAGYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVQLFGSLKPITGLNPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LF  L PI+  +PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYADYITS  388
            +IRGTYNHAQYL+GRREMMQWYADYI S
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDS  388

34) plu0125 in NC_005126


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  517 bits (1950),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 315/391 (81%), Positives = 359/391 (92%), Gaps = 0/391 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKCLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQarekreaakkllSAGSDLGELKKAEKIAQKLNYDNTFEAIAREWHQLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+D GE KK EKIA +++  NTFEA+AREWHQ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRRRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVR+RCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLKDLAGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DLAGYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFESLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LF  L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYSDYIVSLPE  391
            +IRGTYNHAQYL+GRREMMQWY+DYI SL+E
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

35) KO11_04405 in NC_017660


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 311/389 (80%), Positives = 359/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWH+ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DL+GYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LFK L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHAQYL+GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

36) EKO11_0064 in NC_016902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 311/389 (80%), Positives = 359/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWH+ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DL+GYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LFK L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHAQYL+GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

37) LY180_18845 in NC_022364


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 311/389 (80%), Positives = 359/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWH+ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DL+GYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LFK L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHAQYL+GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

38) ECW_m3936 in NC_017635


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 311/389 (80%), Positives = 359/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWH+ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DL+GYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LFK L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHAQYL+GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

39) WFL_19235 in NC_017664


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  515 bits (1943),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 311/389 (80%), Positives = 359/389 (93%), Gaps = 0/389 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHHLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWH+ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLETLRRMEKRGALEKMRKVRQRCGEVFRHAIV  180
            DEIIDTFEKDIFPYIGKRPIAEIKPMELLE+LR+MEKRGALEKMRKVRQRCGEVFR AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlatalatpKKTHFPFLTAEELPHFLRDLSGYTGSVITKTATQIIMLTGV  240
            TGRA+YNPAPDLA+ALATPKK HFPFLTA+ELPHFL DL+GYTGS+ITKTATQIIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFARWEDINFEKRLWEIPAEVMKMKRPHIVPMSDQVVELFKSLKPITGLYPLVFV  300
            RTQELRFA+WEDI+FE +LWEIPAEVMKMKRPHIVP S+QV+ LFK L PI+   PLVF+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRTKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEEGFNSAWIETQLAHVDKN  360
            GRND  KPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKVMMQWYGNYLNSL  389
            +IRGTYNHAQYL+GR+ MMQWY++Y++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

40) SMWW4_v1c00920 in NC_020211


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  506 bits (1907),  Expect = 1e-144, Method: Compositional matrix adjust.
 Identities = 279/390 (72%), Positives = 341/390 (88%), Gaps = 0/390 (0%)

Query  1    MLLTDIQIRRSKPQEKPYTLNDGQGLSLLINTDGSKGWRFRYRYAGKAKLMSFGTYPLVT  60
            M LTD++++ +KP+E+PY L DG G+ LLIN++GSK WR +YR+AGK K++S+G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADAREKRGEARKQVANGIDPVAEKKAQKLARKLSVENSFEAISREWHTNKANRWTLAYR  120
            LADAREKR+EARK +A G DP   KK +K+A ++S+ N+FEA++REWH  KA+RW+L YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMRTFEQDVFPYIGQRPIAEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE+D+FPYIG+RPIAEIKP+ELLE LR++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPYFVKDLEGYTGSIITKNAAKIVMLTGV  240
            TGRA+YNPAPDLASALA PK+ H PFL+A+ELP F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWEEIDFERGIWEIPAERMKMRRPHIVPLSTQAVELLKQLQPITGHYPYIFI  300
            RTQE+RFA WE+IDFE  +WEIPAE MKM+RPHIVP S Q + L+KQL+PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRRKPISKESVNQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GRN+ RKPISKES+NQVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  GIRGTYNHAQYLEKRRVMLQWYADFISGLA  390
            +IRGTYNHAQYL+ RR M+QWYAD+I +L+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

41) ETAE_3428 in NC_013508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  504 bits (1899),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 272/386 (71%), Positives = 338/386 (88%), Gaps = 0/386 (0%)

Query  1    MALSDIQIKRAKPQDKPYTLNDGQGLSILIKPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MAL+D+++K AKP+++PY L DG G+ +LI+++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKREVARKQVANGIDPVEERKAQKLAQQLSTENSFEAISREWHANKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K +K+A Q+S  N+FEA++REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
            DEII TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWDEVDFDKRIWEIPAERMKMRRPHIVPLSTQAMELFKQLQPITGHYPYIFI  300
            RTQE+RFA W+++DF+ ++WEIPAE MKM+RPHIVP S Q + LFKQL+PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRRKPISKESINQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHVDKN  360
            GRN+ RKPISKESINQVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYSNYL  386
            SIRGTYNHAQYL+ RREM+QWY++Y+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

42) YE105_C3845 in NC_015224


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  498 bits (1877),  Expect = 2e-142, Method: Compositional matrix adjust.
 Identities = 272/384 (71%), Positives = 339/384 (89%), Gaps = 0/384 (0%)

Query  1    MPLSDIQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLIS  60
            M+L+D++++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDMARKQVADGTDPAEVKKADKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK +K+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLENGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E  LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            GRND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRRDMLQWYAD  384
            SIRGTYNHAQYL+ RR+M+QWYAD
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

43) Y11_30661 in NC_017564


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  495 bits (1866),  Expect = 2e-141, Method: Compositional matrix adjust.
 Identities = 270/373 (73%), Positives = 336/373 (91%), Gaps = 4/373 (1%)

Query  2    KPKE----MTDGGGLYLEVSASGAKYWRMKYRYGGKEKRIAFGVYPHVSLADARQKRETA  57
            KPKE    ++DGGG+YL ++A+G+KYWRMKYR++GKEK +++GVYP+V+LADAR+KR  A
Sbjct  12   KPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEA  71

Query  58   KKLLASGTDPAEVKKADKLAQRLSSENSFEAISREWHKAKADRWSLGYREEIMSTFEADI  117
            +K+LA+G DP+E KK +K+A ++S  N+FEA++REWH++KADRWSL YR+EI+ TFE DI
Sbjct  72   RKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDI  131

Query  118  FPYIGKRPIAEITPLELLDVLQRIEKRGALEKTHKVRQRCGEVFRYAIITGRAEYNPAPD  177
            FPYIGKRPIAEI P+ELL+ L+++EKRGALEK +KVRQRCGEVFRYAI+TGRA+YNPAPD
Sbjct  132  FPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPD  191

Query  178  LASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGVRTKEMRFATWQ  237
            LASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGVRT+E+RFA W+
Sbjct  192  LASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWE  251

Query  238  EIDLESGLWEIPAERMKMRRPHIVPLSTHVIALFKQLLPITGHYPYIFIGRNDRKKPISK  297
            +ID+E+ LWEIPAE MKM+RPHIVP S +VIALFKQL PI+ H P +FIGRND +KPISK
Sbjct  252  DIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISK  311

Query  298  ETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKNSIRGTYNHAQY  357
            E++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKNSIRGTYNHAQY
Sbjct  312  ESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQY  371

Query  358  LEKRRDMLQWYAD  370
            L+ RR+M+QWYAD
Sbjct  372  LDGRREMMQWYAD  384

44) A1122_05665 in NC_017168


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

45) YPA_4123 in NC_008150


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

46) xerC4 in NC_005810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

47) YPO4033 in NC_003143


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

48) YPD4_3547 in NC_017154


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

49) YPD8_3553 in NC_017160


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

50) y4052 in NC_004088


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

51) YPN_3680 in NC_008149


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

52) YPDSF_3775 in NC_009381


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  494 bits (1861),  Expect = 5e-141, Method: Compositional matrix adjust.
 Identities = 275/386 (72%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

53) YPC_4545 in NC_017265


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  492 bits (1854),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 274/386 (71%), Positives = 338/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSENSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  N+FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITQLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI  +ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

54) YpAngola_A4153 in NC_010159


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  492 bits (1857),  Expect = 9e-141, Method: Compositional matrix adjust.
 Identities = 274/386 (71%), Positives = 339/386 (88%), Gaps = 0/386 (0%)

Query  1    MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARLMSLGTYDLVS  60
            M+L+D +++ AKP+E++Y L+DG G+ LLI++NGSK WR +YRFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKRDVARKQVADGTDPAEVKKAEKLAQRLSSEKSFEAISREWHKAKADRWSLGYR  120
            LA+AR KR  ARK +A G DP+E KK EK+A ++S  ++FEA++REWH++KADRWSL YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMSTFEADIFPYIGKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE DIFPYIGKRPIAEI P+ELL+ L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALSTPKKQHYPFLSAEEMPYFIRDLEGYTGSIITKNAAKILMLTGV  240
            TGRA+YNPAPDLASAL+TPKK H+PFL+A+E+P F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKEMRFATWQEIDLEGGLWEIPAERMKMRRPHIVPLSTQVIALFKQLLPITGHYPYIFI  300
            RT+E+RFA W++ID+E+ LWEIPAE MKM+RPHIVP S QVIALFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GLNDRKKPISKETVNQVIELLGYKGRATGHGFRHTMSTILHEQGYDSAWIELQLAHVDKN  360
            G ND +KPISKE++NQVIELLGYKGR TGHGFRHTMSTILHEQG++SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRREMLQWYADLI  386
            SIRGTYNHAQYL+ RREM+QWYAD I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

55) YPK_0061 in NC_010465


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  491 bits (1853),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 305/390 (79%), Positives = 358/390 (92%), Gaps = 0/390 (0%)

Query  1    MKLTVRQIDTAKPKEKPYKLSDGGGLYLEVTTNGSRYWRLKYRYAGKEKRLAFGVYPEVS  60
            M LT  ++ TAKPKE+PYKL+DGGG+YL + +NGS+YWR+KYR+AGKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQarekreaakkllSAGSDPGELKKAEKIAQKLNYENTFEAIAREWHQLRADRWSLRYR  120
            LA+AREKR  A+K+L+AG+DPGE KK EKIA +++  NTFEA+AREWHQ +ADRWSLRYR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DEIIDTFEKDIFPYIGKRPIAEIKPLELLETLRKMEKRGALEKMRKVRQRCGEVYRYAII  180
            DEIIDTFEKDIFPYIGKRPIAEIKP+ELLE+LRKMEKRGALEKMRKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNpapdlataltppKKQHFPFLTAEELPYFLKNLAGYTGSVitktatkiilltaV  240
            TGRA+YNPAPDLA+AL+ PKK HFPFLTA+ELP FL +LAGYTGS+ITKTAT+II+LT+V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQELRFTRWQDIDLEKGIWEIPAEVMKMKRPHVVPLSKQVIELFNSLKPLSGHYELVFI  300
            RTQELRF++W+DID+E  +WEIPAEVMKMKRPH+VP S QVI LF+ L P+S H  LVFI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDHRKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEKGYNSAWIETQLAHIDKN  360
            GRND RKPISKES+NQVIELLGYKGRLTGHGFRHTMSTILHE+G+NSAWIE QLAH+DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYMDGRREMMQWYADYLDALE  390
            +IRGTYNHAQY+DGRREMMQWYADY+D+L 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

56) ECO26_4941 in NC_013361


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  491 bits (1852),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 274/384 (72%), Positives = 334/384 (87%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            LA+AREKR  ARK +A G DP E +K +K+A ++S KN+FE+V+REWH +KADRW+L YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EII TFE+D+FP+IGKRPIAEIKP+ELLE L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFVRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWQELDLEKGLWEIPAERMKMRRPHIVPLSRQVIRLFQQLKPITGHYPYIFI  300
            RTQE+RFA W+++D+E  LWEIPAE MKM+RPHIVP S QVI LF+QL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRKKPISKESINQVIELLGFKGRITGHGFRHTMSTILHEAGFNSAWIEMQLAHVDKN  360
            GRN+ +KPISKESINQVIELLG+KGR+TGHGFRHTMSTILHE GFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGVYNHAQYLNGRSRMLQFYAD  384
            SIRG YNHAQYL+GR  M+Q YAD
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

57) SEEH1578_04845 in NC_021810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  491 bits (1852),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 274/384 (72%), Positives = 334/384 (87%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKAQKLAQKLSTKNSFESVSREWHAAKADRWTLAYR  120
            LA+AREKR  ARK +A G DP E +K +K+A ++S KN+FE+V+REWH +KADRW+L YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPIAEIKPLELLEVLKRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EII TFE+D+FP+IGKRPIAEIKP+ELLE L+++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFVRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWQELDLEKGLWEIPAERMKMRRPHIVPLSRQVIRLFQQLKPITGHYPYIFI  300
            RTQE+RFA W+++D+E  LWEIPAE MKM+RPHIVP S QVI LF+QL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRKKPISKESINQVIELLGFKGRITGHGFRHTMSTILHEAGFNSAWIEMQLAHVDKN  360
            GRN+ +KPISKESINQVIELLG+KGR+TGHGFRHTMSTILHE GFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGVYNHAQYLNGRSRMLQFYAD  384
            SIRG YNHAQYL+GR  M+Q YAD
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

58) EC042_3992 in NC_017626


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  491 bits (1850),  Expect = 3e-140, Method: Compositional matrix adjust.
 Identities = 270/386 (70%), Positives = 332/386 (87%), Gaps = 0/386 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K  ++A ++S  N+FEA+ REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
            +EII TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVVDLFKQLKPITGHYPYIFI  300
            RTQE+RFA WE++D+E  +WEIPAE MKM+RPHIVP S QV+ LFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRNKPISKESVSQVIESLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GRN+  KPISKES++QVIE LGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRKKMMNWYANHI  386
            SIRGTYNHAQYL+GR+ MM+WYA+ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

59) EcSMS35_4002 in NC_010498


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  486 bits (1834),  Expect = 5e-139, Method: Compositional matrix adjust.
 Identities = 267/384 (70%), Positives = 330/384 (86%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K  ++A ++S  N+FEA+ REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
            +EII TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVVDLFKQLKPITGHYPYIFI  300
            RTQE+RFA WE++D+E  +WEIPAE MKM+RPHIVP S QV+ LFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKESVSQVIELIGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHVDKN  360
            GRN+  KPISKES++QVIEL+GYKGR TGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  RIRGTYNHAQYLEHRKKMMQWYSD  384
             IRGTYNHAQYL+ R+ MMQWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

60) Spro_0108 in NC_009832


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  484 bits (1823),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 274/386 (71%), Positives = 334/386 (87%), Gaps = 0/386 (0%)

Query  1    MLLTDIQIRRSKPQEKPYTLNDGQGLSLLINTDGSKGWRFRYRYAGKAKLMSFGTYPLVT  60
            M LTD++++ +KP+E+PY L DG G+ LLIN++GSK WR +YR+AGK K++S+G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRGEARKQVANGIDPVADkkaqklaqklSFENSFEAISREWHTNKADRWTLAYR  120
            LA+AREKR+EARK +A G DP   KK +K+A ++S+ N+FEA++REWH  KADRW+L YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMRTFEQDVFPHIGQRPIAEIKPLELLEVLRRIEKRGALEKTRKIRQRCGEVFRYAII  180
            +EI+ TFE+D+FP IG+RPIAEIKP+ELLE LR++EKRGALEK RK+RQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPYFVKDLEGYTGSIITKNAAKIVMLTGV  240
            TGRA+YNPAPDLASALA PK+ H PFL+A+ELP F+ DL GYTGSIITK A++I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWEEIDFERAIWEIPAARMKMRRLHIVPLSTQVVELFKQLQPITGHYPYIFI  300
            RTQE+RFA WE+IDFE  +WEIPA  MKM+R HIVP S QV+ LFKQL+PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRRKPISKESVNQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GRN+ RKPISKES+NQVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  GIRGTYNHAQYFAQRQSMMQWYSDNI  386
            +IRGTYNHAQY+  R+ MMQWY+D I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

61) ENC_02820 in NC_021046


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  483 bits (1822),  Expect = 5e-138, Method: Compositional matrix adjust.
 Identities = 261/384 (68%), Positives = 329/384 (86%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSMLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ +LIN++GSK WR ++R+AGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDTARKQVANGIDPVEERKALKLAQKLSTENSFESVSREWHSTKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K  K+A ++S  N+FE+V+REWH TKADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EII TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVHKQKHHPFLSSEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA+YNPAPDLA ALA  K+ H PFL+++ELPHF+ DL +YTGSIITK AT+IIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWDEVDLDKGVWQIPAERMKMRRPHLVPLSTQVIDLFKQLKPITGHYPYIFI  300
            RTQE+RFA W+++D++  +W+IPAE MKM+RPH+VP S QVI LFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKETVSQVIELLGYKGRATGHGFRHTMSTILHEQGFESAWIEMQLAHADKN  360
            GRN+  KPISKE+++QVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAH DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYLEERKKMLQWYSN  384
             IRG YNHAQYL+ R+ M+QWY++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

62) A3UG_00595 in NC_018079


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  483 bits (1821),  Expect = 6e-138, Method: Compositional matrix adjust.
 Identities = 258/386 (67%), Positives = 330/386 (86%), Gaps = 0/386 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYGLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRETARKQVANCIDPVQERKAQKLAQQLSTENSFESICREWHANKANRWTVAYR  120
            LA+AREKR  ARK +A   DP + +K +K+A Q+S  N+FE++ REWH  KA+RW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPISEIKPLELLEVLRRIENRGALEKTRKVRQRCGEVYRYAVI  180
            +EII TFE+D+FP+IGKRPI+EIKP+ELLE LR++E+RGALEK RKVRQRCGEV+RYA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIQDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWEEVDLEKGIWEIPAERMKMRRPHIVPLSTQVIDLFKQLKPITQNYPYIFI  300
            RTQE+RFA WE++D+E  +WEIPAE MKM+RPHIVP S QVI LFKQL PI+++ P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKESVSHVIELLGYKGRATGHGFRHTMSTILHEKGFDTQWIELQLAHIDKN  360
            GRN+  KPISKES+++VIELLGYKGR TGHGFRHTMSTILHE+GF++ WIE+QLAH+DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGIYNHALHIENRRIMLQWYADYL  386
            SIRG YNHA  ++ RR M+QWYADY+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

63) EbC_44590 in NC_014306


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  482 bits (1816),  Expect = 1e-137, Method: Compositional matrix adjust.
 Identities = 261/384 (68%), Positives = 330/384 (86%), Gaps = 0/384 (0%)

Query  1    MPLTDIQIRRAKPLDKPYTMNDGQGLALLINPDGSKGWRFRYRYAGKARLMSFGSYSLVS  60
            M+LTD++++ AKP ++PY + DG G+ LLIN++GSK WR +YR+AGK +++S+G Y+ V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDTARKQVANGIDPVEERKAQKLAQQLSSENSFEAISKEWHANKADRWTLAYR  120
            LA+AREKR  ARK +A G DP E +K +K+A Q+S  N+FEA+++EWH  KADRW+L YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEILKTFEQDVYPFIGRRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EI+ TFE+D++P+IG+RPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASALAVPKQKHHPFLSAEELPHFISDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLASALA PK+ H PFL+A+ELPHF++DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFASWCEVDLVKGVWEIPAERMKMRRPHIVPLSTQVIDLFKQLKLITGHYPYIFI  300
            RTQE+RFA W ++D+   +WEIPAE MKM+RPHIVP S QVI LFKQL  I+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKETVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GRN+  KPISKE+++QVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  NIRGTYNHALYIKQRKSMLQWYSD  384
            +IRGTYNHA Y+  R+ M+QWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

64) A79E_0092 in NC_018522


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  481 bits (1815),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 266/384 (70%), Positives = 328/384 (86%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+E+PY L DG G+ LLIN++GSK WR ++R+AGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LA+AREKR  +RK +A G DP E +K +K+A ++S  N+FEA+ REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
            +EII TFEKD+FP+IGKRP +EIKP+ELLE LR++EKRGALEK RKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+IIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATGDEIDLEKAIWEIPAERMKMRRPHIVPLSTQVIDLFRQLKPITGHYPYIFI  300
            RTQE+RFA  ++ID+E  +WEIPAE MKM+RPHIVP S QVI LF+QL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR++  KPISKES++QVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYIEDRTKMMQWYSD  384
             IRG YNHAQY+++R  MMQWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

65) KP1_5380 in NC_012731


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  481 bits (1815),  Expect = 2e-137, Method: Compositional matrix adjust.
 Identities = 266/384 (70%), Positives = 328/384 (86%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQEKPYTLNDGQGLSLLINPDGSKGWRFRFRLAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+E+PY L DG G+ LLIN++GSK WR ++R+AGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRETSRKQVANGIDPVEERKSQKLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LA+AREKR  +RK +A G DP E +K +K+A ++S  N+FEA+ REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEKDVFPFIGKRPNSEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
            +EII TFEKD+FP+IGKRP +EIKP+ELLE LR++EKRGALEK RKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIIMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+IIMLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATGDEIDLEKAIWEIPAERMKMRRPHIVPLSTQVIDLFRQLKPITGHYPYIFI  300
            RTQE+RFA  ++ID+E  +WEIPAE MKM+RPHIVP S QVI LF+QL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRKNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEMQLAHVDKN  360
            GR++  KPISKES++QVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KIRGIYNHAQYIEDRTKMMQWYSD  384
             IRG YNHAQY+++R  MMQWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

66) EcolC_0053 in NC_010468


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  481 bits (1812),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 264/384 (69%), Positives = 330/384 (86%), Gaps = 0/384 (0%)

Query  1    MALTDTQIKRAKPQDKPYTLNDGQGLSLLINPDGTKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD ++K AKP+++PY L DG G+ LLIN++G+K WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEAREKRDIARKQVANGIDPVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K  ++A ++S  N+FEA+ REWH  KADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIMKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVYRYAII  180
            +EI+ TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEV+RYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIQDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRLATWNEVDLEKGIWEIPAERMKMRRPHIVPLSTQVIALFEQLKPITGHYPYIFI  300
            RTQE+R+A W+++D+E  +WEIPAE MKM+RPHIVP S QVIALF QL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKESVSQVIELLGYKGRATGHGFRHSLSTILHEHGFDSAWIEMQLAHVDKN  360
            GRN+  KPISKES++QVIELLGYKGR TGHGFRH++STILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRLHMMQWYSD  384
            SIRGTYNHAQYL+ R +MMQWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

67) SARI_03887 in NC_010067


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  472 bits (1779),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 268/384 (70%), Positives = 331/384 (87%), Gaps = 0/384 (0%)

Query  1    MALTDIQIKRAKPQDKPYTLNDGQGLSLLINPDGSKGWRFRFRFAGKARLMSFGSYDLVS  60
            MALTD+++K AKP+++PY L DG G+ LLIN++GSK WR ++RFAGK +++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaearekrdaarkQVANGIDPVEERKALKLAQKLSTENSFESVSREWHSTKADRWTVAYR  120
            LA+AREKR  ARK +A G DP E +K  K+A ++S  N+FE+V+REWH TKADRW++ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEIIKTFEQDVFPFIGKRPIGEIKPLELLEVLRRIEKRGALEKTRKVRQRCGEVFRYAII  180
            +EII TFE+D+FP+IGKRPI+EIKP+ELLE LR++EKRGALEK RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIRDLEAYTGSIITKNATKIVMLTGV  240
            TGRA+YNPAPDLA ALA PK+ H PFL+A+ELPHF+ DL +YTGSIITK AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTQEMRFATWDEVNLEKGIWEIPAERMKMRRPHIVPLSTQVIDLFKQLKPITGHYPYIFI  300
            RTQE+RFA W+++++E  +WEIPAE MKM+RPHIVP S QVI LFKQL PI+ H P +FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNRSKPISKESVSQVIELLGYKGRATGHGFRHTMSTILHEQGFDSAWIEIQLAHTDKN  360
            GRN+  KPISKES++QVIELLGYKGR TGHGFRHTMSTILHEQGF+SAWIE+QLAH DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAIYLENRRIMLQWYSD  384
            +IRGTYNHA YL+ RR M+QWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

68) SEEB0189_04710 in NC_021844


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  462 bits (1742),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 246/390 (64%), Positives = 323/390 (83%), Gaps = 0/390 (0%)

Query  1    MKLTARQVETAKPKDKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LT  +V TAKPK++PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARNKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LA+AR+KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E RGA EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA++   K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHMVPLSSQAIDLLNQLKPMTGAGTLLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++    L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRKEMMQWYGDFTSNLG  390
            SIRGTYNHAQYL+GR+EMMQWY+D+  +L+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

69) A225_4904 in NC_018106


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  461 bits (1739),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 249/389 (65%), Positives = 322/389 (83%), Gaps = 0/389 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEALTREWYQRRYDRWSVSYR  120
            LA+AR KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E RGA EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLQTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA++   K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFDSAWIELQLAHVDKN  360
            GRNDP+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYSDYLKLL  389
            SIRGTYNHAQYL+GRREMMQWY+DY+  L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

70) YPK_3149 in NC_010465


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  461 bits (1738),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 237/391 (61%), Positives = 331/391 (85%), Gaps = 0/391 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALTDVKV++AKP ++PYKL+DG GM L++++NGSKYWR++YRF GK+KML++G+YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKATVENTFKAIALEWHEYKRPNWSKGYA  120
            L++AR++R EA++ +A + DP+E KK EK A + ++ NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++I+++FE+DIFP IGKRPIAEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAESNPASELASALTPPKSVHYPHLLADELPAFLEALAAYSGSPITRLATKILMLTGV  240
            TGRA+ NPA++LASAL+ PK VH+P L A+ELP FL  LA+Y+GS IT+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRMAEWKEFDFDQRVWEVPVQRMKMRRPHLVPLSDQVVTALREIQAVTGRYNLVFP  300
            RT ELR A+W ++DF+ ++WE+P + MKM+RPH+VP S+QV++ ++++++++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRREMLQWYGEYVDGLAA  391
            +IRGTYNHAQYL+ RREM+QWY++Y+D+L+ 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

71) EAE_02780 in NC_015663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  460 bits (1735),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 247/387 (64%), Positives = 319/387 (83%), Gaps = 0/387 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARGKREDAKRTLAAGNDPSLERKIEKLSRQQNAENSFEAITREWYQRRYDRWSVSYR  120
            L++AR KR +A++ LAAG DP+  +K EK++ Q +  N+FEA++REW Q + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E RGA EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPALASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVIVKIAMQLLILTGV  240
            TGRA+YNPAP LASA++   K H++FLT +ELP+FL  L  Y+GS+I K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWREFDFERKVWNVPAERMKMRRPHLVPLSGQAIDLLNQLKPMTEAGTLLFP  300
            R  ELR A+W ++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++    L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSEMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYSNYIS  387
            SIRGTYNHAQYL+GRREMMQWY++YI 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYID  387

72) KOX_02335 in NC_016612


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  460 bits (1734),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 247/393 (63%), Positives = 324/393 (83%), Gaps = 0/393 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLSAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LA+AR KR +A++ L+AG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E RGA EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA++   K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GRNDP+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMMQWYGELLSFMCDVG  393
            SIRGTYNHAQYLDGRREMMQWY++ +  + +++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

73) YpsIP31758_0884 in NC_009708


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1722),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

74) int in NC_006155


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1722),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

75) YPTS_3293 in NC_010634


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1722),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

76) YPK_0925 in NC_010465


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1722),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLAVGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

77) A1122_00590 in NC_017168


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

78) YpAngola_A3853 in NC_010159


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

79) YPC_0922 in NC_017265


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

80) int4 in NC_005810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

81) int in NC_003143


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

82) int in NC_017154


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

83) int in NC_017160


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

84) y3271 in NC_004088


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

85) YPN_3086 in NC_008149


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

86) int in NC_014029


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

87) YPDSF_0629 in NC_009381


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  455 bits (1716),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 255/391 (66%), Positives = 326/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKLLALGVYPDVS  60
            M L   +V TAKPK+++YKLADGGG+YLL+N+NGS+YWR+KYRFAGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  120
            LA AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  180
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  240
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWVEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  300
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

88) int in NC_011740


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  455 bits (1715),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 245/386 (64%), Positives = 319/386 (83%), Gaps = 0/386 (0%)

Query  1    MKLTARQVETAKPKDKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVS  60
            M LT  +V TAKPK++PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAVGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR  120
            LA+AR KR +A++ LA G DP+  +K EK++ Q    N+FEA++REW Q + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E RGA EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA++   K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKSMSDMALIVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN  360
            GRN+P+K++S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYGDLI  386
            SIRGTYNHAQYL+GRREMMQWY+D I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

89) int in NC_021591


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  455 bits (1715),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 238/389 (62%), Positives = 329/389 (85%), Gaps = 0/389 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALTDVKV++AKP ++PYKL+DG GM L++++NGSKYWR++YRF GK+KML++G+YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKAMVENTFKAIALEWHEYKRPNWSKGYA  120
            L++AR++R EA++ +A + DP+E KK EK A +  + NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++I+++FE+DIFP IGKRPIAEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAETNPASELASALTSPKSVHYPHLLADDFPAFLQALAAYSGSPITRLATKILMLTGV  240
            TGRA+ NPA++LASAL++PK VH+P L A+++P FL  LA+Y+GS IT+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRMAEWKEFDFEKRVWEVPVERMKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFP  300
            RT ELR A+W ++DFE ++WE+P E MKM+RPH+VP S+QV++ +++++ ++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRREMLQWYGDYVDNL  389
            +IRGTYNHAQYL+ RREM+QWY+DY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

90) M621_05660 in NC_021659


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  454 bits (1710),  Expect = 4e-129, Method: Compositional matrix adjust.
 Identities = 239/389 (62%), Positives = 327/389 (85%), Gaps = 0/389 (0%)

Query  1    MALTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGIYPEIS  60
            MALTDVKV++AKP ++PYKL+DG GM L++++NGSKYWR++YRF GK+KML++G+YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQVANAIDPSEQKKVEKQARKATVENTFKAIALEWHEYKRPNWSKGYA  120
            L++AR++R EA++ +A + DP+E KK EK A + ++ NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++I+++FE+DIFP IGKRPIAEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAETNPASELASALTPPKSVHYPHLLADDFPAFLQALATYSGSPITRLATKILMLTGV  240
            TGRA+ NPA++LASAL+ PK VH+P L A+++P FL  LA Y+GS IT+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRMAEWKEFDFEKRVWEVPVERMKMRRPHLVPLSDQVVSSLREIQVVTGRYNLVFP  300
            RT ELR A+W ++DFE ++WE+P E MKM+RPH+VP S+QV++ +++++ ++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLDQRRVMLQWYADYMDNL  389
            +IRGTYNHAQYLD RR M+QWYADY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

91) PAU_01003 in NC_012962


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  452 bits (1704),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 241/389 (62%), Positives = 323/389 (84%), Gaps = 0/389 (0%)

Query  1    MKLNARQVESAKAKATDYKLADGSGLYLLVKKNGARYWRLKYRIAGKEKLLALGIYPNLS  60
            M L   +V +AK+K   YKLADG+G+YLL++ NG++YWR+KYR+AGKEK+L++G+YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LANARAKRDEAKQHLANGVDPAEVKKTKQKEIIRQATNTFEAIAKEWHSYKLPNWSVGYA  120
            LA+AR KR EA++ LA G DP+E KK  +  +     NTFEA+A+EWH  K   WS+ Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDLLESFNKDIFPYIGKRIITDIKPLDMLETLRKMEQRGVLDKLKKIRQACSQVFKYAIV  180
            D+++++F+KDIFPYIGKR I++IKP+++LE+LRKME+RG L+K++K+RQ C++VF+YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRSEYNPAAELSGALASPKVKHFPHLLADELPLFLQTLSQYKGSIITQIATKLLLLTGV  240
            TGR++YNPA++L++ALA+PK  HFP L A+ELP FL  L+ Y GSIIT+ AT++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAKWDELDLDRKIWEIPLERMKMRRTHIVPLSEQVLSLFKTLEVITGRFEFIFH  300
            RT ELR A W+++D++ K+WEIP E MKM+R HIVP SEQV++LFK LE I+ +  ++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEAAINQVIKRIGYGSRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDP KP+S  +INQVI  +GY +R TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSL  389
            SIRGTYNHAQYLDGRREM+QWYADY+DSL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

92) ETAC_13020 in NC_020796


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  450 bits (1697),  Expect = 4e-128, Method: Compositional matrix adjust.
 Identities = 242/391 (62%), Positives = 323/391 (83%), Gaps = 0/391 (0%)

Query  1    MKLNARQVEASKAKDKPYKLADGGGLYLLVNPNGTKYWRLKYRVAGKEKLLAVGVYPNVT  60
            M L   +V ++K+K++PYKLADGGG+YLL+N+NG+KYWR+KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVKREDAKRVLAAGGDPGQEKQEEKRAKVMAVTNSFEKLAREWHEHKRPTWSKGYA  120
            LADAR KR +A+++LAAGGDPG+ K+EEK A  M++ N+FE +AREWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDILEYLRKDIFPYIGKRAITDIKPMDMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
            D+I++ + KDIFPYIGKR+I++IKPM++L  LRKME+RG L+K++K RQ C ++F YA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEHNPVVDLASALKTPKQKHFPHLMADQLGEFLRALADYSGSRVTQNATRLLMLTGV  240
            TGRA+ NP  DLASAL TPK+ HFP L A++L +FL  LA+Y+GS +T+ AT+++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTVELRAAEWAEVDLDLSLWQIPPERMKMRRPHIVPLSEQALAIMQEMRRISGKGKYIFP  300
            RT ELR A+W ++D++  LW+IP+E MKM+RPHIVP SEQ +A+ +++  IS     +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDAGKPMSEASINQVIKRIGYDGKATGHGFRHTMSTILHEQGYNTAWVETQLAHADKN  360
            GRND+ KP+S  SINQVI  +GY G+ TGHGFRHTMSTILHEQG+N+AW+E QLAH DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYLDALAN  391
            SIRGTYNHAQYLDGRREM+QWYADY+D+L++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

93) Dda3937_00938 in NC_014500


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  449 bits (1693),  Expect = 9e-128, Method: Compositional matrix adjust.
 Identities = 245/391 (63%), Positives = 322/391 (83%), Gaps = 0/391 (0%)

Query  1    MKLNARQVDTAKPKDKPYKLSDGGGLYLLVNPNGSRYWRLKYRVDGKEKLLALGVYPAIS  60
            M L   +V TAKPK++PYKL+DGGG+YLL+N+NGS+YWR+KYR  GKEK+L++GVYP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARGKRDEAKRGIAGGIDPNVARREEKIAREAQIKNTFQDIALEWHASKIKKWSAGYA  120
            LA+AR KR EA++ +A+G DP  A++EEKIA +  +KNTF+ +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFNKDVFPYIGNKPIAQIKPLELLNVLRRMESRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIG++PIA+IKP+ELL+ LR+ME RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESSHYPFLNAQELPEFFHALSEYTGSKlvllaarllilTGV  240
            TGRA+YNPAPDL+SA+      H+PFL A+ELP+F+  L+ YTGS +   A+++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRAANWQEIDTENARWEIPAERMKMRRPHCVPLSRQAIAILDEIREMTGRYPLVFP  300
            RT ELR A+W++ID E   WEIPAE MKM+RPH VP S Q IA++ ++  ++ + PLVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRNTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPR+ +S  SINQV+  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMESLEN  391
            +IRGTYNHAQYLDGRREM+QWYADY++SL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

94) A3UG_04555 in NC_018079


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  448 bits (1686),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 248/391 (64%), Positives = 327/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQVDAAKPKDNPYKLADGGGLYLLIKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L   +V +AKPK+ PYKLADGGG+YLLI++NG+KYWR+KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIAREIQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LADAR KR EA++ +A+G DP EAK+EEKIA ++ L+NTF  +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKARKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR++E RGA EK RKVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHFPFLTPKELPDFFNALSGYSGSELVVLAARLLIITGL  240
            TGRA+YNPAPDL+SA+      HFPFLT++ELP+F+  L+GY+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRGAFWDEINISKAVWEIPASRMKMRRPHVVPLSRQALTLIGQIQELTGNYPLVFP  300
            R  ELR A W++I++   +WEIPA  MKM+RPH+VP S Q ++L+ Q++ ++ + PLVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY+G++TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMEALEN  391
            SIRGTYNHAQYLDGRREM+QWYADY+++L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

95) ETEC_0316 in NC_017633


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  446 bits (1681),  Expect = 7e-127, Method: Compositional matrix adjust.
 Identities = 252/391 (65%), Positives = 328/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L   ++ TAKPKE++YKLADGGG+YLL+++NG+KYWR+KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarakredakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LADAR KR +A++ +A+G DP EAK+EEKIA +  L+NTF  +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR++E RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFLTA+ELP+F+  L++Y+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWDEIDFNKALWEIPASRMKMRRPHIVPLSEQALSLIGKIREITGNYPLMFP  300
            RT ELR A W++IDF+  LWEIPA  MKM+RPHIVP SEQ ++L+ ++  I+ + PL+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

96) EcHS_A0329 in NC_009800


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  446 bits (1680),  Expect = 9e-127, Method: Compositional matrix adjust.
 Identities = 245/388 (64%), Positives = 317/388 (82%), Gaps = 0/388 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L   +V +AKP+E++YKLADG+G+YL + ++GS+YWRMKYRF GKEK +++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARALRDDAKKKLAEGIDPSLAKKEEKLVRDVQLNNTFQAVALEWHGTKVSRWSEGYA  120
            LA+AR  R +A+K LA G DP+ AKKEEK+  ++ L+NTF+AVA EWH TK  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIIEAFNKDIFPYIGQQPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVFRYAIV  180
             +II++F+KDIFPYIG++P+ EIKP+ LL+ LR++E RGA EK +KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEELPDFFKALAGYTGSPLVVLAARLLILTGV  240
            TGRA+YNPA+DL+SA++     H+PFLT +ELP+F+  LAGYTGS +   A+++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVMSGQYPLVFP  300
            RT ELR A W ++D+E  +WEIPAE MKMKRPH+VP S Q + + +QL  +S + PLVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY GR+TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHALYLEGRREMMQWYADYINA  388
            +IRGTYNHA YL+GRREMMQWYADYI++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDS  388

97) ECABU_c03450 in NC_017631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  445 bits (1677),  Expect = 2e-126, Method: Compositional matrix adjust.
 Identities = 250/391 (64%), Positives = 328/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVT  60
            M L   ++ TAKPKE++YKLADGGG+YLL+++NG+KYWR+KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarakredakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LADAR KR +A++ +A+G DP EAK+EEKIA +  L+NTF  +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR++E RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTTKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFLT++ELP+F+  L++Y+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWDEIDFNKAIWEIPASRMKMRRPHIVPLSEQALSLIGKIREITGNYPLMFP  300
            RT ELR A W++IDF+  +WEIPA  MKM+RPHIVP SEQ ++L+ ++  I+ + PL+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

98) ECSE_0264 in NC_011415


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  444 bits (1673),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 247/389 (64%), Positives = 315/389 (81%), Gaps = 0/389 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L   +V +AKP+E++YKLADG+G+YL + ++GS+YWRMKYRF GKEK +++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWHGTKVSRWSEGYA  120
            LA+AR  R EA+K LA G DP+ AKKEEK+  ++ L+NTF++VA EWH TK  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIIEAFNKDIFPYIGQLPVNEIKPLVLLNVLRRIESRGATEKAKKVRQRCSEVFRYAIV  180
             +II++F+KDIFPYIG+ P+ EIKP+ LL+ LR++E RGA EK +KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVVELPDFFKALSGYTGSPLVVLAARLLILTGV  240
            TGRA+YNPA+DL+SA++     H+PFLT  ELP+F+  L+GYTGS +   A+++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGACWSEFDFEKAVWEIPAERMKMKRPHLVPLSTQALEIAQQLKVMSGQYPLVFP  300
            RT ELR A W ++DFE  +WEIPAE MKMKRPH+VP S Q + + +QL  +S + PLVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY G++TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRLEMMQWYADYIDKL  389
            +IRGTYNHAQYLDGR EMMQWYADYID L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

99) EC55989_0268 in NC_011748


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  443 bits (1667),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 247/391 (64%), Positives = 327/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPSGGKYWRFKYRVAGKEKLLALGVYPEVT  60
            M L   ++ TAKPKE++YKLADGGG+YLL++++G+KYWR KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LADAR KR EA++ +A+G DP EAK+EEKIA +  L+NTF  +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR++E RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFLTA+ELP+F+  L++Y+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWDEIDLNKAIWEIPASRMKMRRPHVVPLSKQALSLIGQIKELTGNYPLMFP  300
            RT ELR A W++ID++  +WEIPA  MKM+RPH+VP S Q ++L+ Q+  ++ + PL+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY+G++TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

100) O3K_20180 in NC_018658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  443 bits (1667),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 247/391 (64%), Positives = 327/391 (84%), Gaps = 0/391 (0%)

Query  1    MKLNARQIDTAKPKEKAYKLADGGGLYLLVKPSGGKYWRFKYRVAGKEKLLALGVYPEVT  60
            M L   ++ TAKPKE++YKLADGGG+YLL++++G+KYWR KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADarakreeakrGIAGGIDPMEAKREEKIARETQLNNTFKDIALEWHSSKLKKWSAGYA  120
            LADAR KR EA++ +A+G DP EAK+EEKIA +  L+NTF  +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPYIGKKPIAEIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR++E RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESNHYPFLTAKELPDFFKALSSYSGSALVVMAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFLTA+ELP+F+  L++Y+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWDEIDLNKAIWEIPASRMKMRRPHVVPLSKQALSLIGQIKELTGNYPLMFP  300
            RT ELR A W++ID++  +WEIPA  MKM+RPH+VP S Q ++L+ Q+  ++ + PL+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYNGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY+G++TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSLEH  391
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

101) ETAC_11945 in NC_020796


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  443 bits (1667),  Expect = 9e-126, Method: Compositional matrix adjust.
 Identities = 243/388 (63%), Positives = 314/388 (81%), Gaps = 0/388 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRYRYRFAGKPKMISFGVYGDVS  60
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKAEKIALQFAHENSFESVAREWHGSKKATWSEGYA  120
            LA+AR KR EAR +LA G +P+EA+K EKIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
             E+++  EKDIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPAFISALENYKGSLVTKYATQLLMLTGV  240
            TGRA YN APDLA AL  PK  HFPFLT +ELP F++ L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWVEFDLENAIWEIPKERMKKRRPHLVPLSTQALSILRQLQVITGNYSLVFP  300
            RT ELR A+W ++D+E  +WEIP E MK +RPH+VP S Q +++++QL+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESTWIEMQLAHVDKN  360
            GRND RKP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE+GF+S+WIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYILSRKKMMQWYSEFISN  388
            SIRGTYNHAQY+ +R+ MMQWY+++I +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDS  388

102) ECO55CA74_01660 in NC_017656


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  443 bits (1667),  Expect = 9e-126, Method: Compositional matrix adjust.
 Identities = 233/386 (61%), Positives = 316/386 (82%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LADAR +R EARK++A G +P+E +KE+K+A+Q    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  240
            TGRA+YNPA+DL+SAL   +  HFPFL A+E+P+FL  L GY+GS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  300
            RT ELR A W+++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  360
            GRNDP +P+S  SINQ I  +GY G++TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYFSGRKSMMDWYSNLI  386
            SIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

103) ETAF_0751 in NC_017309


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  442 bits (1665),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 242/390 (63%), Positives = 318/390 (82%), Gaps = 0/390 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L   +V +AKP+E++YKLADG+G+YL + ++GS+YWRMKYRF GKEK +++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWHGTKVSRWSEGYT  120
            LA+AR  R EA+K LA G DP+ AKKEEK+  ++ L+NTF++VA EWH TK  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDIFPYIGQQPVNEIKPLVLLHVLRRMESRGATEKAKKVRQRCSEVFRYAIV  180
             +I+++F+KDIFPYIG++P+ EIKP+ LL+ LR+ME RGA EK +KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEKLPDFFKALSSYTGSPLVVLAARLLILTGV  240
            TGRA+YNPA+DL+SA++     H+PFLT + LP+F+  L++YTGS +   A+++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVMSGQYPQVFP  300
            RT ELR A W ++D+E  +WEIPAE MKMKRPH+VP S Q + + +QL  +S + P VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY G++TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRREMMQWYADYIDNIG  390
            +IRGTYNHAQYL+GRREMMQWYADYID+++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

104) int in NC_011745


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  442 bits (1666),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 240/391 (62%), Positives = 316/391 (81%), Gaps = 0/391 (0%)

Query  14   MLLSDLAIRRAKPKEKAYTLNDGNGLSLLIEPNGSKGWRLRYRFAGKPKMLSLGVYPEVS  73
            M L+D+ ++ AKPKE++Y L DG G+ LLI++NGSK WR++YRFAGK KMLS+GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  74   LSDARTARDEAKRLIAGGVNPSEVRKAQKREQANKCGNTFEVIAREWYEKRLDRWSPSYA  133
            L+DAR  R EA++++A+G +P+E +K +K        NTFE +AREW + + DRWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  134  EEMIETFEKDVFPYIGGRPIAEIKPMELLAVLSRLNDRGATEKLRKVRQRCGEVFRYAII  193
            +E+I+TFEKD+FPYIG RPIAEIKPMELL  L +++ RGA EK+RKVRQRCGEVFRYAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  194  TGRAEYNPAPDLASAFAPHKKEHYAYLKVDELPEFFRVFNTYTGSQIVKLGMRLLILTGL  253
            TGRA+YNPAPDLASA+A  KK H+++L  +ELP+F+  +  YTGS I K + ++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  254  RPGELRQAEWQEIDFDNRLWEVPKERMKMRRPHCVPLSEQAIAILEQLKHMTGQYPFIFP  313
            R  ELR A+W++IDF+ +LWE+P E MKM+RPH VP SEQ IA++ QL  ++ + P++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  314  GRIQHSKPMSEMAMNVLIRRIGYAGRVTGHGFRHTMSTILHEQGYNSAWIETQLAHVDKN  373
            GR +  KP+S  ++N +I  +GY GR+TGHGFRHTMSTILHEQG+NSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  374  SIRGTYNHAQYLDGRREMLQWYADYMDSLEQ  404
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

105) Dd586_2842 in NC_013592


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  442 bits (1664),  Expect = 2e-125, Method: Compositional matrix adjust.
 Identities = 235/391 (61%), Positives = 323/391 (83%), Gaps = 0/391 (0%)

Query  1    MALTDVKVRSAKPMDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKMLALGVYPEIS  60
            MALTDVKV++AKP ++PYKL+DG GM L++++NGSKYWR++YRF GK+KML++GVYP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQVTNSIDPSEKKKVEKQARKVAVENTFKSVALEWHEYKRPNWSKGYA  120
            L++AR++R EA++ ++ + DP+E KK EK A ++++ NTF +VA EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIEPLEALTTLRKLEKRGVLDKLRKVRQACKQVCTYAIV  180
            ++++++FE+DIFP IGKRPIAEI P+E L +LRK+EKRG L+K+RKVRQ C +V  YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKTNPFAELASALTTAKSTHYPHLLADQLPAFLKALEAYSGSPITRLATRILMLTGV  240
            TGRA  NP ++LASAL+T+K  H+P L A++LP FL  L +Y+GS IT+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRLAEWKEFDFDKRVWEVPVERMKMRRPHLVPLSDQVIEALRELQMITGRYNLVFP  300
            RT ELR+A+W ++DF+ ++WE+P E MKM+RPH+VP S+QVI  +++L+ I+ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPISEASINQVLKRIGYHGKATGHGFRHTMSTILHEEGFNTAWIELQLAHVDKN  360
            GRND  KPIS  SINQV+  +GY G+ TGHGFRHTMSTILHE+GFN+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQHLENRRGMLQWYADYLESLTN  391
            +IRGTYNHAQ L+ RR M+QWYADY++SL++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

106) int in NC_010694


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  441 bits (1662),  Expect = 2e-125, Method: Compositional matrix adjust.
 Identities = 236/389 (61%), Positives = 316/389 (82%), Gaps = 0/389 (0%)

Query  1    MKLNARQVDTARGKDKPYKLADGGGLYLLVNPNGARYWRLKYRAAGKEKLLAVGVYPDVS  60
            M L   +V TA+ K++PYKLADGGG+YLL+N+NG++YWR+KYR AGKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSDARRRRDEAKKILAAGGDPGQEKQAEKQSKILAVQNSFEAIALEWHEHKKTNWSEGYA  120
            L+DAR +R EA+KILAAGGDPG+ K+ EK +  ++++N+FEA+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  TDILEYLSKDIFPFVGKRAINEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTHAVI  180
             +I++ + KDIFP++GKR+I EIKP E+L  LRKME+RG L+K++K RQ C ++F  A++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAENNPVTDLAGALKAPKQKHFPHLNVDQIPPFLNDLSNYSGSMITRYATQLLMITGL  240
            TGRA+ NP  DLA+AL +PK+ HFP L  +++P FL DL+ Y+GS+IT+ ATQ++M+TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRASEWSDIDFDKGIWQIPAERMKMRRPHIVPISSQAKSLLEAIHQLTGRGKYVFP  300
            RT ELR ++W DIDF+  +W+IPAE MKM+RPHIVP S Q  +L+  ++ ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDAGKPMSEASINQVIKRIGYDGKATGHGFRHTMSTILHEQGYNSAWVETQLAHVDKN  360
            GRND+ KP+S  SINQVI  +GY G+ TGHGFRHTMSTILHEQG+NSAW+E QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDAL  389
            SIRGTYNHAQYLDGRREM+QWYADY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

107) G2583_0351 in NC_013941


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  441 bits (1662),  Expect = 2e-125, Method: Compositional matrix adjust.
 Identities = 233/386 (61%), Positives = 316/386 (82%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTLGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LADAR +R EARK++A G +P+E +KE+K+A+Q    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA+YNPA+DL+SAL   +  HFPFL A+E+P+FL  L GY+GS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RT ELR A W+++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GRNDP +P+S  SINQ I  +GY G++TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

108) EcSMS35_0299 in NC_010498


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  441 bits (1660),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 317/391 (82%), Gaps = 0/391 (0%)

Query  1    MKLNARQVDAAKPREKAYKLADGAGLYLEVVPSGSRYWRMKYRFNGKEKRMAFGVYPAVS  60
            M L   +V +AKP+E++YKLADG+G+YL + ++GS+YWRMKYRF GKEK +++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARALRDEAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQAVALEWHGTKVSRWSEGYA  120
            LA+AR  R EA+K LA G DP+ AKKEEK+  ++ L+NTF+AVA EWH TK  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIIEAFNKDIFPYIGQLPVNDIKPLVLLNVLRRMESRGATEKAKKVRQRCSEVFRYAIV  180
             +II++F+KDIFPYIG+ P+ +IKP+ LL+ LR+ME RGA EK +KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLTSAMSGHESKHYPFLTVEELPDFFKALAGYTGSPLVVLAARLLILTGV  240
            TGRA+YNPA+DL+SA++     H+PFLT +ELP+F+  LAGYTGS +   A+++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGAFWSEFDLEKAVWEIPAERMKMKRPHLVPLSTQALEIVQQLKVISGQYPLVFP  300
            RT ELR A W ++D+E  +WEIPAE MKMKRPH+VP S Q + + +QL  IS + PLVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASMNQVFKRIGYTGKVTGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRNDPRK +S  S+NQV+  +GY G++TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHALYLEGRREMMQWYADCIGRIGN  391
            +IRGTYNHA YL+GRREMMQWYAD I+ +++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

109) ECs0289 in NC_002695


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  440 bits (1659),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 232/386 (61%), Positives = 316/386 (82%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y ++DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LADAR +R EARK++A G +P+E +KE+K+A+Q    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  240
            TGRA+YNPA+DL+SAL   +  HFPFL A+E+P+FL  L GY+GS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  300
            RT ELR A W+++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  360
            GRNDP +P+S  SINQ I  +GY G++TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYFSGRKSMMDWYSNLI  386
            SIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

110) ECNA114_2439 in NC_017644


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  440 bits (1657),  Expect = 6e-125, Method: Compositional matrix adjust.
 Identities = 242/390 (63%), Positives = 311/390 (80%), Gaps = 0/390 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARTKRDEARSMLANGINPSEARKADKIALQFAHENSFESVAREWHSSKKATWSEGYA  120
            LA+AR KR EAR +LA G +P+EA+K +KIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
             E+++  EKDIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA YN APDLA AL  PK  HFPFLT +ELP+F+  L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAINILKKLQEITGNYSLVFP  300
            RT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q I ++K+L+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVSKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESAWIEMQLAHVDKN  360
            GRND  KP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIKDRQVMMEWYASLLNTTC  390
            SIRGTYNHAQY+ +R+ MM+WYA  +++  
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

111) ECSF_2224 in NC_013654


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  440 bits (1657),  Expect = 6e-125, Method: Compositional matrix adjust.
 Identities = 242/390 (63%), Positives = 311/390 (80%), Gaps = 0/390 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTAGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARTKRDEARSMLANGINPSEARKADKIALQFAHENSFESVAREWHSSKKATWSEGYA  120
            LA+AR KR EAR +LA G +P+EA+K +KIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KEVLNCMEKDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
             E+++  EKDIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA YN APDLA AL  PK  HFPFLT +ELP+F+  L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAINILKKLQEITGNYSLVFP  300
            RT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q I ++K+L+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVSKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHEHGFESAWIEMQLAHVDKN  360
            GRND  KP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE+GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIKDRQVMMEWYASLLNTTC  390
            SIRGTYNHAQY+ +R+ MM+WYA  +++  
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

112) W5S_3565 in NC_017845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  439 bits (1654),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 244/389 (63%), Positives = 323/389 (84%), Gaps = 0/389 (0%)

Query  1    MKLNARQVDTAKPKDKPYKLADGGGLYLLVKPNGARYWRLKYRVAGKEKLLALGVYPDVT  60
            M L   +V TAKPK++PYKLADGGG+YLL+++NG++YWR+KYR AGKEK+L++GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarakrdeakrGIAGGIDPSEAKRKEKAILEAQVNNTFQDIATEWHSSKLKKWSEGYA  120
            LADAR KR EA++ +A+G DP+EAK+ EK  L+  ++NTF+ +A EWH +K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFNKDVFPYIGKKPIAEIKPLELLNVLRRMEGRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FPYIGK+PIAEIKP+ELL+ LR+ME RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESSHYPFLAAPDLPAFFEALSSYSGSMLVVLAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFL+A +LP F+  L++Y+GS++   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGATWKEIDSDTAVWEIPAERMKMRRPHIVPLSSQAQAIIARIREMTGRYPHIFP  300
            RT ELR A W +ID ++ +WEIPAE MKM+RPHIVP S Q  A++ ++  ++ + P +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPRKTMSEASINQVFKRIGYSGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRNDPRK +S  SINQV+  +GY G++TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDAL  389
            SIRGTYNHAQYLDGRREM+QWYADY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

113) Z0324 in NC_002655


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  439 bits (1655),  Expect = 9e-125, Method: Compositional matrix adjust.
 Identities = 232/386 (61%), Positives = 316/386 (82%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L D++++ AKP  ++Y ++DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LADAR +R EARK++A G +P+E +KE+K+A+Q    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA+YNPA+DL+SAL   +  HFPFL A+E+P+FL  L GY+GS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RT ELR A W+++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GRNDP +P+S  SINQ I  +GY G++TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

114) SMWW4_v1c08950 in NC_020211


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  439 bits (1654),  Expect = 9e-125, Method: Compositional matrix adjust.
 Identities = 233/386 (61%), Positives = 313/386 (82%), Gaps = 0/386 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSRRDEARKLVVEGKNPSEVRKEQKLALQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LADAR +R EARK++  G +P+E +KE+K+ALQ    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFKNDIFPYVGARPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKANEIPDFLRALESYTGSRVVQIATKLLMITGV  240
            TGRA++NPA+DL+SAL   +  HFPFL ANE+P+FL  L +YTGS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAASWSEFDLDNAIWEIPAERMKMRRPHLVPLSTQALHLLNELVVMTGNYRYVFP  300
            RT ELR A W ++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRVTGHGFRHSLSTILHEQGYESAWIETQLAHVDKN  360
            GRNDP KP+S  SINQVI  +GY GR+TGHGFRH++STILHEQG++SAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGAYNHAQYISQRGLMLQWYSDFI  386
            SIRG+YNHAQY+  R  M+QWY+D+I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

115) PAGR_g2495 in NC_017554


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  438 bits (1651),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 240/389 (62%), Positives = 313/389 (81%), Gaps = 0/389 (0%)

Query  1    MQLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKCVVFGVYPTIT  60
            M L   +V TAKPK++PYKLADGGGMYL + +NG+K WRMKYR+AGKEK + +GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSKRDDAKKLLVNGVDPSAFKQESKQAHIEEVKNTFQQIALEWHNMKVKKWSAGYA  120
            LADAR KR +A+K+L  G DP+  K+E K A    +KNTF+ +A EWH+ K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEDRGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FP+IG+RP+A+IKP+ELL+ L+KME RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESTHYPFLTTEELPAFFKALAGYSGSELMVLAARLLIITGL  240
            TGRA+YNPAPDL+SA+      H+PFLT++ELP F+  LAGY+GS +   A++++++TG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWSEIDTKKALWEISAERMKMRRPHIIPLSTQALAIIEQIRAMTGQFPLLFP  300
            RT ELR A W +ID    LWEI+AE MKM+RPHI+P S Q +A++ Q+ +++ + PL+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPSKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHVDKN  360
            GRNDP K +S  SINQV+  +GY GR+TGHGFRHTMST+LHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMASL  389
            +IRGTYNHAQYLDGRREM+QWYADY+ SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

116) ECENHK_04640 in NC_018405


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  438 bits (1650),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 233/386 (61%), Positives = 314/386 (82%), Gaps = 0/386 (0%)

Query  1    MPLNDMLIRRAKPEDKPYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D+ ++ AKP ++PY L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSRRDEARKLVAEGKNPSEVRKEQKRALQTESENAFEKIAREWHQLKSAKWSAGYA  120
            LA+AR +R EARK++A G +P+E +KE+K ALQ    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRADYNPAADLSSALEVHQSNHFPFLKADEIPEFLRALEGYTGSKLVQIATKLLMITGV  240
            TGRADYNPA+DL+SAL   +  HFPFL A+E+P+FL  L GYTGS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWQEFDLDNAIWEIPAERMKMRRSHLVPLSTQALDLLNELKTMTGNYRYVFP  300
            RT ELR A W+++D++  +WEIPAE MKM+R+H+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGKVTGHGFRHTLSTVLHEKGYDSVWIETQLAHVDKN  360
            GRNDP KP+S  SINQVI  +GY G++TGHGFRHT+ST+LHE+G++S WIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYIDNRKCMLQSYADFI  386
            +IRGTYNHAQY+D R+ M+Q YAD+I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

117) SEEH1578_21245 in NC_021810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  438 bits (1648),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 244/384 (64%), Positives = 309/384 (81%), Gaps = 0/384 (0%)

Query  1    MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  60
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  120
            LA+AR KR EAR +LA G +P+EA+K +KIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  180
             E+++  E+DIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  240
            TGRA YN APDLA AL  PK  HFPFLT +ELP+F+  L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  300
            RT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q I+++K+L+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  360
            GRND RKP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLENRRKMMQIYSD  384
            SIRGTYNHAQYL+ RR MMQ Y+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

118) CFSAN002069_19870 in NC_021812


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  438 bits (1649),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 244/384 (64%), Positives = 309/384 (81%), Gaps = 0/384 (0%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  136
            LA+AR KR EAR +LA G +P+EA+K +KIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  137  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  196
             E+++  E+DIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  197  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  256
            TGRA YN APDLA AL  PK  HFPFLT +ELP+F+  L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  257  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  316
            RT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q I+++K+L+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  317  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  376
            GRND RKP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  377  SIRGTYNHAQYLENRRKMMQIYSD  400
            SIRGTYNHAQYL+ RR MMQ Y+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

119) SeHA_C2638 in NC_011083


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  438 bits (1649),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 244/384 (64%), Positives = 309/384 (81%), Gaps = 0/384 (0%)

Query  17   MLLSDIQIKRAKPKDKPYTLNDGMGLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVS  76
            M L+D+++K AKPK++PY L DG G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  77   LAQARAKRDEARSMLAKGINPSEARKANKIALQFAHENSFESVAREWHSSKKTTWSEGYA  136
            LA+AR KR EAR +LA G +P+EA+K +KIALQ +  N+FE+VAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  137  KEVLNCMERDIFPFIGQRPIEQIEPLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVA  196
             E+++  E+DIFP+IG+RPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  197  TGRAKYNFAPDLAIALNKPKTQHFPFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGV  256
            TGRA YN APDLA AL  PK  HFPFLT +ELP+F+  L  Y GS++TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  257  RTIELRAAEWAEFDLDNALWEIPKERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFP  316
            RT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q I+++K+L+ I+ + +LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  317  GRNDVRKPMSEASINKVIKLLGYHGRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKN  376
            GRND RKP+S  SIN+VI LLGY GRLTGHGFRHTMSTILHE GF+SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  377  SIRGTYNHAQYLENRRKMMQIYSD  400
            SIRGTYNHAQYL+ RR MMQ Y+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

120) intS in NC_013892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  437 bits (1647),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 243/389 (63%), Positives = 314/389 (81%), Gaps = 0/389 (0%)

Query  1    MKLTDMAIKRAKPKEKSYMLADGNGLSLLVETNGSKGWRYRYQFTGKTKMISLGIYPVVT  60
            M LTD+ +K AKPKE++Y LADG G+ LL+++NGSK WR +Y+F+GK KM+S+G+YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTEARAKRDEARKQVANGINPSEARKAEKVASISQSENTFKNIALEWYEGRKDRWSVGYR  120
            L++AR KR EARK +A G +P+EA+K EK+A      NTF  +A EW + + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDMMDAFEKDVFPYIGDRPIADIKPMELLEVLSVMEKRGTTEKLKKVRQRCGEVWKYAII  180
            D+++D+FEKD+FPYIG RPIA+IKPMELLE L  MEKRG+ EK++KVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFVPHKREHYAHLSVSELPEFLSSIDKYMGSQIVRVALRILILTGV  240
            TGRA+YNPAPDLASA+   K+ H++ L+ +ELP+FL+ +  Y GS I + A +I++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEINFDIGIWEIPAEKMKMRRPHIVPLSEQVIELLKQIHPISGSYQYIFP  300
            R  ELR A+W +I+F+  +WEIPAE MKM+RPHIVP SEQVI L+KQ++PIS     +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SRTDYRKHISDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQGYNTAWIEAQLAHVDKN  360
            +R D RK IS  ++N +I  +GY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMETL  389
            SIRGTYNHAQYLDGRREM+QWYADY+++L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

121) PC1_2828 in NC_012917


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  437 bits (1644),  Expect = 6e-124, Method: Compositional matrix adjust.
 Identities = 239/389 (62%), Positives = 311/389 (80%), Gaps = 2/389 (0%)

Query  1    MLLTDLKIKKAKAQDKPYTLNDGNGLSLLIDPKGTKGWRFRYQFANKPKLISFGTYDTVS  60
            M LTD+K+K AK++++PY L DG G+ LLI+++G+K WR +Y+FA K K++S+G Y  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKRDEARSMLANGINPSDARRADKLSLLFSTENTFEAVAREWHTSKLTTWSEGYA  120
            LADAR KR EAR +LA G +P++A++ +K++L  S  NTFEAVAREWH +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KEVIHYLEKEIFPFLGKRPIDQITPLELLAVLQKIEKRGALEQASKIRRRCGEVFRYAVV  180
             E+I+ +EK+IFP++GKRPI +I P+ELL  L+K+EKRGALE+  K+R+RCGEVFRYA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAMYNPAPDLDLASAMNKPKNNHFPFLTESELPDFVQALNNYKGSQITKYATQLLMLT  240
            TGRA YNPAPDL  ASA+  PK+ HFPFLT +ELP+F+  L  Y GS ITK ATQ++MLT
Sbjct  181  TGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  GVRTIELRAAEWVEFDLDNALWEIPKERMKKRRPHLVPLSTQAVTILKELKVLTGYYQLV  300
            GVRT ELR A+W ++D++  LWEIP E MK +RPH+VP S Q ++++K+L  ++    LV
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPGRNDTRKPMSDAAINKVIKMLGYHGRLTGHGFRHTMSTILHEHGFNSAWIETQLAHVD  360
            F GRND RKP+S  +IN+VI +LGY GRLTGHGFRHTMSTILHE+GFNSAWIE QLAHVD
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGTYNHAQYLEGRREMLQWYGEFTS  389
            KNSIRGTYNHAQYL+GRREM+QWY+++  
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYID  387

122) Spro_3887 in NC_009832


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  437 bits (1644),  Expect = 7e-124, Method: Compositional matrix adjust.
 Identities = 234/389 (61%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ ++ +KP+++PY L+DGGG+ +LI++NGSK WR +YRF GK KMLS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTDARQKRDEAKKLVVSGINPSEARKQQKRDRQDVTGNTFEGIAREWYEKRRDRWSESYA  120
            L+DAR+KR EA+K++ +G +P+EA+K++K   Q    NTFE++AREW + + DRWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMKTFESDVFPYIGNRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
            +E++ TFE D+FPYIG+RPIAEIKPMEL+ +L K++ RGA EK+RKVRQRCGEV +YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPEFFRIFNTYTGSLIVKLAMRLLIITGT  240
            TGRA+YNPAPDLASA++  KK H++FL+  ELP+F+  +  YTGS+I K A +++++TG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSFVFP  300
            R  ELR A+W ++DF+ +LWE+P+E MK +RPH VP S+Q I+++ QL P++ H ++VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N ++  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDSL  389
            SIRGTYNHAQYLDGRREM+QWYADY+DSL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

123) SerAS12_4096 in NC_015566


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  436 bits (1642),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 316/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ ++ +KP+++PY L+DGGG+ +LI++NGSK WR +YRF GK KMLS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L+DAR+KR EA+K++A+G +P+EA+K++K   Q    NTFE++AREW   + DRWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
            +E++ TFE D+FPYIG RPIAEIKPMEL+ +L K++ RGA EK+RKVRQRCGEV +YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA+YNPAPDLASA++  KK H++FL+  ELP+F+  +  YTGS+I K A +++++TG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR A+W ++DF+ +LWE+P+E MK +RPH VP S+Q I+++ QL P++ H + VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N ++  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHAQYLDGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

124) SerAS13_4096 in NC_017573


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  436 bits (1642),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 316/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ ++ +KP+++PY L+DGGG+ +LI++NGSK WR +YRF GK KMLS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L+DAR+KR EA+K++A+G +P+EA+K++K   Q    NTFE++AREW   + DRWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
            +E++ TFE D+FPYIG RPIAEIKPMEL+ +L K++ RGA EK+RKVRQRCGEV +YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA+YNPAPDLASA++  KK H++FL+  ELP+F+  +  YTGS+I K A +++++TG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR A+W ++DF+ +LWE+P+E MK +RPH VP S+Q I+++ QL P++ H + VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N ++  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHAQYLDGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

125) SerAS9_4095 in NC_015567


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  436 bits (1642),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 235/389 (61%), Positives = 316/389 (82%), Gaps = 0/389 (0%)

Query  1    MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVS  60
            M+LTD+ ++ +KP+++PY L+DGGG+ +LI++NGSK WR +YRF GK KMLS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTDARQKRDEAKKLVASGINPSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYA  120
            L+DAR+KR EA+K++A+G +P+EA+K++K   Q    NTFE++AREW   + DRWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGATEKLRKVRQRCGEVWKYAIV  180
            +E++ TFE D+FPYIG RPIAEIKPMEL+ +L K++ RGA EK+RKVRQRCGEV +YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT  240
            TGRA+YNPAPDLASA++  KK H++FL+  ELP+F+  +  YTGS+I K A +++++TG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFP  300
            R  ELR A+W ++DF+ +LWE+P+E MK +RPH VP S+Q I+++ QL P++ H + VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRIHHSKPISEMAMNVLVRRIGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GR +  KPIS  ++N ++  +GY GR+TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYIDAL  389
            SIRGTYNHAQYLDGRREM+QWYADYID+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

126) intS in NC_016514


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  435 bits (1639),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 248/391 (64%), Positives = 315/391 (81%), Gaps = 2/391 (0%)

Query  24   MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPTVT  83
            M L   KV +AK KE++YKL+DGGG+YL +++NGS+YWRMKYRFAGKEK LS+GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  84   LADARQKREDAKKLLAAGEDPGEVKKAKKQALNAAIETLNPFRDVALEWHKMKSPKWSEG  143
            LADAR+KR +A+K+LAAG DPGE KK  K AL+ ++   N F  VA EWH+ K+ +WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLK--NTFEAVAREWHQTKADRWSLR  118

Query  144  YASDIIEAFEKDIFPHIGHRPIADIQPLELLGVLRLIEARGAMEKAKKVRQRCGEVFRYA  203
            Y  +II++FEKDIFP IG RPIA+I+P+ELL  LR +E RGA+EK +KVRQRCGEVFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  204  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKAKELPEFFTALNAYSGSPIVllgaqllilt  263
            IVTGRA YNPAPDLASA+     VH+PFL A+ELP+F+T L +Y+GS I   ++Q+++LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  264  glRTGELRAGEWSEVDFNNAVWEIPKERMKMRRSHIVPLPKQALSHLKSLKDLTGNYPLM  323
            G+RT ELR ++W ++DF+  +WEIP E MKM+R+HIVP + Q ++ +K L  ++ + PL+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  324  FPGRNDPSKPMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  383
            F GRNDP KP+S  SINQV+  +GY GR+TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  384  KNSIRGIYNHAQYLEGRREMMQWYANYLSEL  414
            KNSIRG YNHAQYL+GRREMMQWYA+Y+  L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

127) KPK_4426 in NC_011283


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  434 bits (1635),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 239/391 (62%), Positives = 313/391 (81%), Gaps = 0/391 (0%)

Query  1    MKLNARQVETAKPKDKPYKLADGGGMYLEVFPNGTKSWRMKYRIAGKEKRVVFGVYPTIT  60
            M L   +V TAKPK++PYKLADGGGMYL + +NG+K WRMKYR+AGKEK + +GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSKRDDAKKLLVNGVDPSAFKKESKLAQIEEVKNTFQQIALEWHNMKVKKWSAGYA  120
            LADAR KR +A+K+L  G DP+  KKE K+A    +KNTF+ +A EWH+ K  +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDILEAFNKDVFPFIGQRPVADIKPLELLNVLKKMEERGATEKAKKVRQRCGEVFRYAIV  180
             +I+++F+KD+FP+IG+RP+A+IKP+ELL+ L+KME RGA EK +KVRQRCGEVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLTSAMQGHESKHYPFLTIEELPAFFKALAGYSGSELVVLAARLMIITGV  240
            TGRA+YNPAPDL+SA+      H+PFLT +ELP F+  LAGY+GS +   A++++++TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRGALWSEIYTDKGLWEISAERMKMRRPHIVPLSVQALEIIEKIRAMTGNFHLMFP  300
            RT ELR A W +I  +  LWEI+AE MKM+RPHIVP S Q + ++ ++ +++ +  L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPSKTMSEASINQVFKRIGYTGRVTGHGFRHTMSTVLHEQGYNTAWIETQLAHLDKN  360
            GRNDP K +S  SINQV+  +GY GR+TGHGFRHTMST+LHEQG+N+AWIE QLAH+DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMLQWYADYMDSLEN  391
            +IRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

128) int in NC_014228


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  434 bits (1635),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 240/391 (62%), Positives = 322/391 (83%), Gaps = 0/391 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLADGGGLYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDIS  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG++YWR+KYR+AGKEK+L++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARTKRNEARRTLSDGNDPIeekkaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYA  120
            LA+AR KR+EAR+ L+ G DP E KK EK A   ++ N+FE++A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDILEYLKKDIFPYIGKRAVTEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
            ++I++ + KDIFPYIGKR+++EIKP E+L  LRKME+RG L+K++K RQ C ++F YA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPVTDLASALKTPKQKHFPHLLADQMNEFLIALAGYSGSEVTQSATRLLMLTGV  240
            TGRA++NP  DLASAL TPK+ HFP L A+++ +FL  LAGY+GS +T++AT+++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRESEWTEFDFDKDIWQIPAERMKMRRPHIVPLSNQVKAILIKLHSITGRGKYVFP  300
            RT ELR ++W ++DF+  +W+IPAE MKM+RPHIVP S+QV A++ +L++I+ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDAGKPMSEAAINQVIKRIGYDGRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            GRND+ KP+S  +INQVI  +GY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYADHMEMLEH  391
            SIRGTYNHAQYL+GRREM+QWYAD ++ L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

129) PC1_3281 in NC_012917


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  432 bits (1627),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 234/386 (61%), Positives = 311/386 (81%), Gaps = 0/386 (0%)

Query  1    MALNDMQVRSAKPEEKPYTLGDGLGLSLLIEPTGSKSWRFRYRFGGKPKMISFGAYPLVS  60
            MAL D++V++AKP E+PY L+DG G+ LLI++ GSK WR +YRF+GK KM+S+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARKKRDEARKQVLDGINPSEQRKAQKLNLMSESENTFEIIACEWHAMKSARWSAGYA  120
            LA+AR KR EARK +  G +P+E +K +K+ L     NTFE +A EWH  K+ RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFRNDIFPYVGKRSIAEIKPLELLNVLRKMEKRGALEKMKKVRQRCSEVFRYAIA  180
             +I+++F +DIFPY+GKR+IAEIKP+ELL+ LRKMEKRGALEKM+KVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEINPAADLTSVLTTHKAQHYPFLKADEIPTFIQAVESYTGSVLVQIAAKLLMLTGV  240
            TGRA+ NPA+DL+S L+T K  H+PFL A+E+P F+  + +YTGS++ + A++++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWSEFDLEHAIWEIPAERMKKRRSHLVPLSTQALSLLSKLQTISGNYKYVFP  300
            RT ELR A+W ++D+E  +WEIPAE MK +R+H+VP S Q ++L+ +L+ IS +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEGSINRMIKHIGYEGRLTGHGFRHTMSTILHEKGYDSAWIEMQLAHVDKN  360
            GRNDP KP+S  SIN++I  +GY GRLTGHGFRHTMSTILHE+G++SAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLEQRRDMMQWYSNCF  386
            SIRGTYNHA YL+ RR+MMQWY++ +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

130) ECH74115_0306 in NC_011353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  431 bits (1623),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 230/386 (60%), Positives = 314/386 (82%), Gaps = 0/386 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  77
            M+L D++++ AKP  ++Y ++DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  78   LADARSRRDEARKLVAEGKNPSEVRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYA  137
            LADAR +R EARK++A G +P+E +KE+K+A+Q    N+FE +AREWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  138  SDIMEAFKNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVNRPAIA  197
             +I+++F +DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EV R AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  198  TGRAEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATKLLMITGV  257
            TGRA+YNPA+DL+SAL   +  HFPFL A+E+P+FL  L GY+GS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  258  RTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVDLLNELKIMTGNYRYVFP  317
            RT ELR A W+++D++  +WEIPAE MKM+RPH+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  318  GRNDPNRPMSEASINQAIKRIGYGGKVTGHGFRHTLSTILHEQGFESAWIEIQLAHVDKN  377
            GRNDP +P+S  SINQ I  +GY G++TGHGFRHT+STILHEQGF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  SIRGTYNHAQYFSGRKSMMDWYSNLI  403
            SIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

131) Pecwa_1377 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  431 bits (1621),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 236/391 (61%), Positives = 327/391 (84%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFAGKQKTLALGVYPEIT  60
            M+LTDVKV++AKP +++YKL+DG GM L++++NGSKYWR++YRFAGK+K L++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWREYKRPNWSKGYA  120
            L++AR++R EA++ +A+G DP+E KK +K   Q  + NTF A+A EW++ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++++++FE+DIFP IGKRPIAEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAENNpaselasalpppkaTHYPYLLPDELPDFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA+ NPA++LASAL+ PK  H+P+L ++ELP+FL  L+ Y+GS +T+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRQAEWKEFDFEKRLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RT ELR A+W ++DFE +LWE+P E MKM+RPH+VP S+QVI  ++QL +++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRSMLQWYGDFVDGLEH  391
            +IRGTYNHAQYL+ RR M+QWY+D++D+L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

132) KPHS_10130 in NC_016845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  430 bits (1620),  Expect = 5e-122, Method: Compositional matrix adjust.
 Identities = 238/391 (61%), Positives = 318/391 (82%), Gaps = 0/391 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LADAR +R +ARK++A G +P+E +KE+KIALQ    ++FE +A EWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F++DIFPY+G RPI+EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKADELPDFLRALDSYTGSRLVQIATKLLMITGV  240
            TGRA++NPA+DL+SAL   +  HFPFL A+ELP+FL  L +YTGS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWSEFDLDNAIWEISAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RT ELR A W ++D++  +WEI+AE MKM+R+H+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRLTGHGFRHTMSTILHEKGFDSAWIEIQLAHVDKN  360
            GRNDP KP+S  SINQVI  +GY GRLTGHGFRHTMSTILHE+GF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRSSMIQWYNDYIYSIKD  391
            SIRGTYNHAQYL+ R  M+QWY DYI S+ +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

133) N559_4136 in NC_022082


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  430 bits (1620),  Expect = 5e-122, Method: Compositional matrix adjust.
 Identities = 238/391 (61%), Positives = 318/391 (82%), Gaps = 0/391 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YR+AGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LADAR +R +ARK++A G +P+E +KE+KIALQ    ++FE +A EWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F++DIFPY+G RPI+EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPAADLSSALEVHQSNHFPFLKADELPDFLRALDSYTGSRLVQIATKLLMITGV  240
            TGRA++NPA+DL+SAL   +  HFPFL A+ELP+FL  L +YTGS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWSEFDLDNAIWEISAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RT ELR A W ++D++  +WEI+AE MKM+R+H+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEASINQVIKRIGYGGRLTGHGFRHTMSTILHEKGFDSAWIEIQLAHVDKN  360
            GRNDP KP+S  SINQVI  +GY GRLTGHGFRHTMSTILHE+GF+SAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEKRSSMIQWYNDYIYSIKD  391
            SIRGTYNHAQYL+ R  M+QWY DYI S+ +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

134) A225_1133 in NC_018106


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  429 bits (1616),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 234/387 (61%), Positives = 316/387 (82%), Gaps = 0/387 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YRFAGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA  120
            LADAR +R +ARK++A G +P+E +KE+KIALQ    ++FE +A EWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFQNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F++DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPAAELSSALDVHQSNHFPFLKADEIPDFLRALNGYTGSRLVLIATKLLMITGV  240
            TGRA++NPA++L+SAL   +  HFPFL A+E+P+FL  L GYTGS +   AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWSEFDLDNAIWEIPAERMKMRRSHLVPLSTQALDLLNELKMMTGNYRYVFP  300
            RT ELR A W ++D++  +WEIPAE MKM+R+H+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPNKPMSEASVNQVIKRIGYGGKVTGHGFRHSMSTILHEHGFESSWIEMQLAHVDKN  360
            GRNDP KP+S  S+NQVI  +GY G++TGHGFRH+MSTILHE+GF+S+WIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDKRKVMMQWYADNVQ  387
            SIRGTYNHAQYLD R+ MMQWYAD ++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYID  387

135) SeSA_A0666 in NC_011094


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  429 bits (1617),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 231/389 (60%), Positives = 315/389 (81%), Gaps = 0/389 (0%)

Query  1    MKLTARQISTAKPTEKPYKLSDGGGLYLLVNPNGSRYWRMKYRYAGKEKLLSIGVYPDVT  60
            M LT  ++ TAKP E+PYKL+DGGG+YLL+N+NGS+YWRMKYR+AGKEK+LSIGVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARDKRTQAKRILAAGDDPSEVKQAEREAKNLAVNNSFELLALEWHEHKKPNWSSGYA  120
            LA+AR+KR++A++ILAAG+DP+E K+ E+ A +++++N+FE +A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDILEYLRKDIFPYIGKKAITDIKPMTMLSVLKKMEDRGVLDKLKKTRQACRQIFTYAII  180
            D+I++ + KDIFPYIGK++I++IKPM +L  L+KME RG L+K++K RQ C ++F YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPVTDLAGALKTPKQQHFPHLMPTQIGPFIHAVNTYSGSKVTRIATLLLMYTSV  240
            TGRA++NP  DLA+AL TPK+ HFP L + ++  F+  +  Y+GS +T+ AT ++M T+V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRASEWTEFDLDNDLWQIPKERMKMRRPHLVPLSRQVKSHLLELKKITGWGKYVFP  300
            RT ELR ++W ++D++  LW+IP E MKM+RPH+VP S QV + + +L  I+     VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDAHKPMSEASINQVIKRIGFAGKVTGHGFRHTMSTILHEKGFNSAWIEAQLAHADRN  360
            GRND++KP+S  SINQVI  +G+ G++TGHGFRHTMSTILHE+GFNSAWIE QLAH D+N
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLDGRREMLQWYADYLDEL  389
            +IRGTYNHAQYLDGRREM+QWYADY+D L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

136) SeSA_A0374 in NC_011094


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  428 bits (1613),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 250/391 (64%), Positives = 315/391 (81%), Gaps = 2/391 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLADGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPAVS  60
            M L   KV +AK KE++YKLADGGG+YL +++NGS+YWRMKYRFAGKEK LS+GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREDAKKLLAAGNDPGEVkkakklalTSATEIVNPFKEVALEWHKMKSPKWSKG  120
            LADAR+KR +A+K+LAAG DPGE KK  K+  +    + N F  VA EWH+ K+ +WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKI--ALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  YASDILEAFEKDIFPHIGQRPIADIKPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            Y  +I+++FEKDIFP IG+RPIA+IKP+ELLE LR +E RGA+EK +KVRQRCGEVFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKATELPEFFTALNAYTGSPIVVLGAHLLILT  240
            IVTGRA YNPAPDLASA+     VH+PFL A ELP+F+T L +YTGS I   ++++++LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  GLRTGELRAAEWCEIDFDNALWEIPKERMKMRRAHLVPLSNQalalletlkeltGNYPLM  300
            G+RT ELR A+W +IDF+  LWEIP E MKM+R+H+VP S+Q +AL+  L  ++ + PL+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPGRNDPSKSMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            F GRNDP K++S  SINQV+  +GY GR+TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYLEGRREMMQWYANYLSEL  391
            KNSIRG YNHAQYL+GRREMMQWYA+Y+  L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

137) W5S_1285 in NC_017845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  428 bits (1610),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 325/391 (84%), Gaps = 0/391 (0%)

Query  1    MPLNARQIETAKPQDTEYKLTDGAGLYLLIKPNGAKYWRLKYRVAGKEKKLSIGVYPDIS  60
            M+L   ++ TAKP++  YKL+DG+G+YLLI++NG+KYWR+KYR AGKEK LSIGVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARLKREEARKIVASGGDPSEQKQVERQAKKISIDNTFKAIALEWHEYKRPNWSKGYA  120
            LA+AR KR EARKI+A+GGDP+E K+ E+ A ++S+ NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLMEAFENDIFPDIGKRPIAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++++++FE+DIFP IGKRPIAEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPDFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA+ NPA++LASAL+ PK  H+P L ++ELP+FL  L+ Y+GS +T+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RT ELR A+W ++DFE  LWE+P E MKM+RPH+VP S+QVI  ++QL +++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFIDGLEH  391
            +IRGTYNHAQYL+ RR M+QWY+D+ID+L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

138) PC1_2870 in NC_012917


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  428 bits (1610),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 236/391 (61%), Positives = 323/391 (83%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEIT  60
            M+LTDVKV++AKP +++YKL+DG GM L++++NGSKYWR++YRF GK+K L++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYA  120
            L++AR++R EA++ +A+G DP+E KK +K   Q  + NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLMEAFENDIFPDIGKRPVAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++++++FE+DIFP IGKRP+AEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPTFLRALSTYSGSKVTQLATRILMLTGV  240
            TGRA+ NPA++LASAL+ PK  H+P L ++ELP FL  L+ Y+GS +T+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSAQVIDALQQLQAVTGRYNLVFP  300
            RT ELR A+W ++DFE  LWE+P E MKM+RPH+VP S QVI  ++QL++++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFIDGLEH  391
            +IRGTYNHAQYL+ RR M+QWY+D+ID+L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

139) S70_17360 in NC_017731


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  427 bits (1609),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 244/391 (63%), Positives = 322/391 (83%), Gaps = 0/391 (0%)

Query  1    MKLTVKQIDSSKPKEKDYKLSDGGGLYLLVKTNGGKYWRLKYRIDGKEKLLAIGVYPTVT  60
            M LT  ++ ++KPKE+ YKL+DGGG+YLL+++NG+KYWR+KYR+ GKEK+L+IGVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   ladarrkrddakrlladGIDPNQQRKEQKQASKIDSVNTFKNIALEWYEGRKDRWSVGYR  120
            LADAR KR +A+++LA G DP + +KE+K A ++   NTF  +A EW + + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDMMDAFEKDVFPYIGNRPIAEIKPMELLEVLSIMEKRGATEKLKKVRQRCGEVWKYAII  180
            D+++D+FEKD+FPYIG+RPIAEIKPMELLE L  MEKRGA EK++KVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFVPHKREHYAHLSVSELPDFLSSIDKYMGSQIVRVALRVLILTGV  240
            TGRA+YNPAPDLASA+   K+ H++ L+ +ELP+FL+ +  Y GS I + A ++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEINFDTKIWEIPAEKMKMRRPHIVPLSEQVIDLLRQIHPISGSYQYIFP  300
            R  ELR A+W +I+F++K+WEIPAE MKM+RPHIVP SEQVI L++Q++PIS     +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SRTDYRKHISDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQGYNTAWIETQLAHVDKN  360
            +R D RK IS  ++N +I  +GY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYIDGRREMLQWYADYMGALEN  391
            SIRGTYNHAQY+DGRREM+QWYADY+++L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

140) ETAE_0799 in NC_013508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  427 bits (1609),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 236/389 (61%), Positives = 318/389 (82%), Gaps = 0/389 (0%)

Query  18   MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  77
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YRFAGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  78   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSTKWSEGYA  137
            LADAR +R +ARK++A G +P+E +KE+KIALQ    ++FE +A EWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  138  SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  197
             +I+++F++DIFPY+G RPI+EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  198  TGRAEFNPAADLSSALDVHQSNHFPFLKADEIPDFLRALDGYTGSKLVQIATKLLMITGV  257
            TGRA++NPA+DL+SAL   +  HFPFL A+E+P+FL  L GYTGS + + AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  258  RTIELRAALWSEFDLDNAIWEIPAERMKMRRAHLVPLSTQALDLLNELKIMSGNYRYVFP  317
            RT ELR A W ++D++  +WEIPAE MKM+R+H+VP S Q + L+++L  +S +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  318  GRNDPNKPMSEASINQVIKRIGYSGRVTGHGFRHTLSTILHEKGFSTAWVEMQLAHTDKN  377
            GRNDP KP+S  SINQVI  +GY GR+TGHGFRHT+STILHE+GF++AW+EMQLAH DKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  378  KIRGTYNHAQYLEDRRNMMQFYANYFIPL  406
             IRGTYNHAQYL++RR+MMQ YA+Y+ +L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

141) PAU_02730 in NC_012962


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  427 bits (1607),  Expect = 5e-121, Method: Compositional matrix adjust.
 Identities = 239/389 (62%), Positives = 310/389 (80%), Gaps = 0/389 (0%)

Query  1    MKLTDLAIKRAKPKEKAYTLADGNGLSLLIDTKGSKGWRYRYQFAGKTKMISLGVYPVVT  60
            M LTD+ +K AKPKE++Y LADG G+ LLI+++GSK WR +Y+FAGK KM+S+GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LTEARAKRDEARKLVANGINPSEARKAEKTAAINQTEHTFKNIALEWYNSRKDRWSVGYR  120
            L++AR KR EARK++A G +P+EA+K EK A      +TF  +A EW +++ DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDMMSAFENDVFPYIGDRPIAEIKPLELLEVLSIMEKRGTTEKLKKVRQRCGEVWKYAII  180
            ++++ +FE+D+FPYIG RPIAEIKP+ELLE L  MEKRG+ EK++KVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFIPHKREHYAHLSVGELPEFLRSIDKYMGSQIVRTALRILILTGV  240
            TGRA+YNPAPDLASA+   K+ H++ L+  ELP+FL  +  Y GS I +TA +I++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEIDLDKAIWEISAEKMKMRRAHIVPLSEQVINLLKQIQPISGSYQYVFP  300
            R  ELR A+W +ID++  +WEI+AE MKM+R+HIVP SEQVI L+KQ++PIS     VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SRTDYRKHLSDMALNTMIRRMGYSGRATGHGFRHTMSTILHEQNYPSEWIETQLAHVDKN  360
            +R D RK +S  ++N +I  +GY GR TGHGFRHTMSTILHEQ + S WIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYMDAL  389
            SIRGTYNHAQYLDGRREM+QWYADY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

142) Pecwa_1403 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  427 bits (1608),  Expect = 5e-121, Method: Compositional matrix adjust.
 Identities = 236/391 (61%), Positives = 323/391 (83%), Gaps = 0/391 (0%)

Query  1    MPLTDVKVRSAKPEDKAYKLTDGEGMHLMVHPNGSKYWRLQYRFDGKQKTLALGVYPEIT  60
            M+LTDVKV++AKP +++YKL+DG GM L++++NGSKYWR++YRF GK+K L++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQRRDEAKRQIATGTDPSEQKKVDKQLRQTLVDNTFKAIALEWHEYKRPNWSKGYS  120
            L++AR++R EA++ +A+G DP+E KK +K   Q  + NTF A+A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLMEAFENDIFPDIGKRPVAEIKPLEMLTSLRKLEKRGVLDKLRKIRQACNQVFRYAIV  180
            ++++++FE+DIFP IGKRP+AEIKP+E+L +LRK+EKRG L+K+RK+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAENNpaselasalpppkaTHYPHLLPDELPDFLRALSTYSGSKITQLATRILMLTGV  240
            TGRA+ NPA++LASAL+ PK  H+P L ++ELP+FL  L+ Y+GS IT+ AT+I+MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFP  300
            RT ELR A+W ++DFE  LWE+P E MKM+RPH+VP S+QVI  ++QL +++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKN  360
            GRND  KP+S  SINQV+  +GY G+ TGHGFRHTMSTILHEQG+N+AWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  TIRGTYNHAQYLEQRRGMLQWYGDFTDGLEH  391
            +IRGTYNHAQYL+ RR M+QWY+D+ D+L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

143) YE105_C2844 in NC_015224


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  426 bits (1602),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 233/384 (61%), Positives = 304/384 (80%), Gaps = 0/384 (0%)

Query  1    MLLNDFKIRSAKPTDKAYTLNDGKGLSLIISPNGVKGWRFRYQFGGKAHMISFGVYGPVS  60
            M L D K+++AKP +++Y L DG G+ L+I++NG K WR +Y+F+GK  M+S+GVY  V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARRQREEAKSALANGTNPSDARKAEKIALKYPAKNTFEDIAREWHTSKLATWTPEYA  120
            LADAR +R EA+  LA G +P++A+K EKIAL+ + KNTFE +AREWH +K   W+  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DTVIRGFDNNVFPYIGKRPIDQIAPLELLAVLQRIEKRGALELTGKIRRRCGEVFRYAVV  180
            D +I  F++++FPYIGKRPI +I P+ELL  L+++EKRGALE   K+R+RCGEVFRYA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATYNPAPDLASALNRPKNGHYPFLTESELPEFIQALDNYKGSKQTKYATQLLMLTGV  240
            TGRA YNPAPDLASAL  PK+ H+PFLT +ELP+F+  L  Y GS  TK ATQ++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWSEFDLDNALWEVPKERMKKRRPHLVPLSKQALAILEKLKVLTGNYKLVFP  300
            RT ELR A+W ++D++  LWE+P E MK +RPH+VP S Q +A++ +L  ++ +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDAGKPMSEASINKVIKMLGYHGRATGHGFRHTMSTILHEKGYNSAWIETQLAHVDKN  360
            GRND+ KP+S  SIN+VI +LGY GR TGHGFRHTMSTILHE+G+NSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYGD  384
            SIRGTYNHAQYL+GRREM+QWY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYAD  384

144) ETAF_0741 in NC_017309


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  421 bits (1584),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 232/387 (60%), Positives = 314/387 (82%), Gaps = 0/387 (0%)

Query  1    MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRFAGKPKMISLGVYPTIT  60
            M+L D++++ AKP  ++Y L+DG G+ LLI++NGSK WR +YRFAGK KM+S+GVYP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarsrrddarKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSEGYA  120
            LADAR +R +ARK++A G +P+E +KE+KIALQ    ++FE +A EWHQ K+ +WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SDIMEAFQNDIFPYVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA  180
             +I+++F++DIFPY+G RP++EIKP+ELL+ LRK+EKRGALEKMRKVRQRC+EVFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPAADLSSALDVHQSNHFPFLKADEIPDFLRALDGYTGSQLVLIATKLLMITGV  240
            TGRA++NPA+DL+SAL   +  HFPFL A+E+P+FL  L GYTGS +   AT+++M+TGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAALWSEFDLDNAIWEIPAERMKMRKAHLVPLSTQALDLLNELKIMTGNYRYVFP  300
            RT ELR A W ++D++  +WEIPAE MKM+++H+VP S Q + L+++L  ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPYKPMSEASINQLIKRIGYGGRLTGHGFRHTFSTILHEAGFNSIWIELQLAHVDKN  360
            GRNDP KP+S  SINQ+I  +GY GRLTGHGFRHT STILHE GFNS WIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGIYNHANYIESRKDMMQWYSDKIN  387
            SIRG YNHA+Y+++R++MMQWY+D I+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYID  387

145) ESA_03025 in NC_009778


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  419 bits (1576),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 246/391 (63%), Positives = 317/391 (82%), Gaps = 2/391 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFGGKEKRLSFGVYPTVS  60
            M L   KV +AK KE++YKL+DGGG+YL +++NGS+YWRMKYRF+GKEK LS+GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREEAKKLLATGDDPSEVkkakklaliaaTEIVNPFRDVALEWHKMKSPKWSEG  120
            LADAR+KR EA+K+LA+G+DP+E KK  K+AL     + N F  VA EWH+ K+ +WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQ--MSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  YASDILEAFDKDIFPHIGHRPIADIQPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            Y  +I+++F+KDIFP IG RPIA+I+P+ELLE LR +E RGA+EK +KVRQRCGEVFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  IVTGRAVYNPAPDLASAMQGHEAVHYPFLKASELPEFFTVLNAYTGSPIVllgahllilt  240
            IVTGRA YNPAPDLASA+     VH+PFL A+ELP+F+T L +YTGS I   ++++++LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  glRTGELRAAEWREVDFDNAIWEIPKERMKMRRAHIVPLSKQALVYLKRLKELTGNYPLM  300
            G+RT ELR A+W ++DF+  +WEIP E MKM+R+HIVP S Q +  +K+L  ++ + PL+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPGRNDPSKFMSEASINQVFKRIGYGGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            F GRNDP K +S  SINQV+  +GY GR+TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYLDGRREMMQWYGDFINGL  391
            KNSIRG YNHAQYLDGRREMMQWY+D+I++L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

146) SeHA_C4738 in NC_011083


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  419 bits (1577),  Expect = 1e-118, Method: Compositional matrix adjust.
 Identities = 243/390 (63%), Positives = 315/390 (81%), Gaps = 0/390 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S Q   ++ QL  +S +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSLS  390
            +IRGTYNHAQYLDGRREMMQWYADYIDSLS
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

147) SN31241_7100 in NC_021902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  419 bits (1578),  Expect = 9e-119, Method: Compositional matrix adjust.
 Identities = 243/390 (63%), Positives = 315/390 (81%), Gaps = 0/390 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQTTDILLQLKTFSGQYQLVFP  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S Q   ++ QL  +S +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLDGRREMMQWYADYIDSLS  390
            +IRGTYNHAQYLDGRREMMQWYADYIDSLS
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

148) ECL_01076 in NC_014121


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  418 bits (1573),  Expect = 3e-118, Method: Compositional matrix adjust.
 Identities = 247/391 (64%), Positives = 312/391 (80%), Gaps = 2/391 (0%)

Query  1    MMLNARKVEAAKGKEKSYKLSDGGGLYLQVEPNGSRYWRMKYRFAGKEKRLSFGVYPTVS  60
            M L   KV +AK KE++YKL+DGGG+YL +++NGS+YWRMKYRFAGKEK LS+GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREDAKKLLAAGEDPGEVkkakkhaltaatEILNPFREVALEWHKMKSPKWSEG  120
            LADAR+KR +A+K+LAAG DPGE KK  K AL     + N F  VA EWH+ K+ +WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQM--SLKNTFEAVAREWHQTKADRWSLR  118

Query  121  YASDIIEAFEKDIFPHIGHRPIADIKPLELLEVLRLIEARGAMEKAKKVRQRCGEVFRYA  180
            Y  +II++FEKDIFP IG RPIA+IKP+ELLE LR +E RGA+EK +KVRQRCGEVFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  IVTGRAIYNPAPDLASAMQGHEAVHYPFLKVNELPEFFTALNAYSGSPIVllgahllilt  240
            IVTGRA YNPAPDLASA+     VH+PFL  NELP+F+T L +Y+GS I   ++++++LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  glRTGELRAAEWREVDFDNAVWEIPKERMKMRRTHIVPLSKQALVHLGRLKELTGNYPLM  300
            G+RT ELR A+W ++DF+  +WEIP E MKM+R HIVP S Q +  + +L  ++ + PL+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPGRNDPSKFMSEASINQVFKRIGYAGRVTGHGFRHTMSTILHEKGFNSAWIETQLAHLD  360
            F GRNDP K +S  SINQV+  +GY GR+TGHGFRHTMSTILHE+GFNSAWIE QLAH+D
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  KNSIRGIYNHAQYIEGRREMMQWYADFLEGL  391
            KNSIRG YNHAQY++GRREMMQWYAD++++L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

149) EcSMS35_3112 in NC_010498


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  417 bits (1569),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 243/390 (63%), Positives = 314/390 (81%), Gaps = 0/390 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDVS  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYA  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S Q   ++ QL  +S +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLS  390
            SIRGTYNHA YLDGRREMMQWYADYIDSLS
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

150) EcE24377A_3377 in NC_009801


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  417 bits (1569),  Expect = 6e-118, Method: Compositional matrix adjust.
 Identities = 242/390 (63%), Positives = 314/390 (81%), Gaps = 0/390 (0%)

Query  1    MALTARQVETARPKEKDYKLSDERGLYLLVKTTGARYWRLKYRIAGKEKKLALGVYPDIS  60
            MALT  +V TA+PKE+ YKL+D  G+YLL+++ G++YWR+KYR+AGKEK L++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARIKRDDARKIISEGGDPGEKKRKEKLTQKISATNTFHALATEWHQHKSLSWSESYT  120
            LA+AR KR +ARKI++ GGDPGE K+ EK++ ++S  NTF+A+A EWHQ K+  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  RSVLEALDKDIFPYLGKRSVTDILPLEMLEILRRIEKRGSLEKLRKVRQYCNQIFRYAIA  180
              ++++++KDIFPY+GKR++++I P+E+LE LR++EKRG+LEK+RKVRQ C ++FRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATVNPASELTSTLAAPKAAHFPHLRADELPVFLRKLAEYHGSPVTrmatnlllltgl  240
            TGRA  NPA++L+S+LA+PK  HFP L A+ELP FL  LA Y GS +T+ AT++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtielrSAEWSEIDFDNALWTIPESRMKMRRKHVVPLSRQATDILLQLKTFSGQYRLVFP  300
            RT ELR A+W +IDF+  LW IP   MKM+R H+VP S Q   ++ QL  +S +  LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRCDINKPMSEASINMVLKRIGYDGRATGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360
            GR D  KP+S  SIN V+  +GY GR TGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHALYLDGRREMMQWYADYIDSLS  390
            SIRGTYNHA YLDGRREMMQWYADYIDSLS
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

151) Pat9b_1012 in NC_014837


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  414 bits (1559),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 231/391 (60%), Positives = 307/391 (79%), Gaps = 0/391 (0%)

Query  1    MKLNVRQIETAKPKDKAWKLADGGGLYLEIFPTGGKSWRLKYRFAGKEKRVVFGLYPAVT  60
            M L   ++ TAKPK+++ KLADGGG+YL I + G+K WR+KYRFAGKEK + +G+YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARGKREDAKRILAAGGDPGAAKQEAKQAKILAVNNNFEAMAREWHGTKRANWSQGYA  120
            LA+AR KR +A++ILAAGGDPG AK+E K A  ++++N FEA+AREWH TK   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DDILEYLRKDIFPHIGKMPVTEITPMLMLAVLRKMEQRGVLDKLKKTRQACSQIYVYAIV  180
            D+I++ + KDIFP IGK P++EI PM +L  LRKME+RG L+K++K RQ C++++ YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPVSELAGALKSPKQKHFPHLLNNEIGAFLRALCGYSGSKMTQYATRLLMLTGT  240
            TGRA+YNP ++LA+AL +PK+ HFP L  NE+  FL  L GY+GS +T+ AT+++MLTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRAAEWREFDLSKGLWEIPEGRMKMRRKHSVPLSRQAVELLEEIQQLTGRGKYVFP  300
            RT ELR A+W ++D+   LWEIP   MKM+R H VP S Q + L+ +++ ++ +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRSNAGKPMSEATINQVIKRVGYDGRATGHGFRHTMSTVLHEQGYNSAWIEVQLAHVDKN  360
            GR+++ KP+S  +INQVI  +GY GR TGHGFRHTMST+LHEQG+NSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLDGRREMLQWYADYLDGLRD  391
            SIRGTYNHAQYLDGRREM+QWYADY+D+L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

152) CSSP291_04405 in NC_020260


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  412 bits (1551),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 244/389 (63%), Positives = 312/389 (81%), Gaps = 0/389 (0%)

Query  1    MPLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDIS  60
            M+L   +V TAKP++++YKLADGGG+YL++N+NGSKYWRMKYRFAGKEK LS+G YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARTKRDEARKTLANDKDPGEVKKAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYA  120
            LA+AR KR EARK LA + DPGE KK E +A ++S+ NTFEA+A EW ++K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DYVNRAFKNNVFPFVGSQPVNEIKPLELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIV  180
            D +  +F +++FP++G +P+ EIKP+ELL  L++MEKRGA E   KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLGSALQGYEKQHYPFLTAAELPEFLQKLSQYTGSlvtllatrllmltgl  240
            TGRA+YNPA+DL+SAL    K H+PFLTA ELP+FL  L+ YTGS++T  AT+++MLTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtvELRMAEWSEIDFENHIWEIPKSRMKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFA  300
            RT ELR A+W +IDFE  +WEIP   MKM+RPHIVP S Q +A ++QL  ++    ++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVNKPMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRND  KP+S  SIN VI  +GY  R TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKEMMQWYGDYLDGL  389
            +IRGTYNHAQYL+GR+EMMQWY+DY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

153) ECL_03688 in NC_014121


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  412 bits (1551),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 244/389 (63%), Positives = 312/389 (81%), Gaps = 0/389 (0%)

Query  1    MPLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGTYPDIS  60
            M+L   +V TAKP++++YKLADGGG+YL++N+NGSKYWRMKYRFAGKEK LS+G YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARTKRDEARKTLANDKDPGEVKKAELLAQKLSVTNTFEAIAVEWYNAKVSGWSKNYA  120
            LA+AR KR EARK LA + DPGE KK E +A ++S+ NTFEA+A EW ++K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DYVNRAFKNNVFPFVGSQPVNEIKPLELLSVLQRMEKRGAPELASKVRQRCSEVFRYAIV  180
            D +  +F +++FP++G +P+ EIKP+ELL  L++MEKRGA E   KVRQRC+EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLGSALQGYEKQHYPFLTAAELPEFLQKLSQYTGSlvtllatrllmltgl  240
            TGRA+YNPA+DL+SAL    K H+PFLTA ELP+FL  L+ YTGS++T  AT+++MLTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtvELRMAEWSEIDFENHIWEIPKSRMKMRRPHIVPlsaqslaalrqlkqlTGTYQFIFA  300
            RT ELR A+W +IDFE  +WEIP   MKM+RPHIVP S Q +A ++QL  ++    ++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVNKPMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEEGFNTAWIETQLAHVDKN  360
            GRND  KP+S  SIN VI  +GY  R TGHGFRHTMSTILHE+GFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  AIRGTYNHAQYLEGRKEMMQWYGDYLDGL  389
            +IRGTYNHAQYL+GR+EMMQWY+DY+D+L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

154) EAE_24695 in NC_015663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  412 bits (1549),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 244/389 (63%), Positives = 312/389 (81%), Gaps = 0/389 (0%)

Query  1    MTLNARQVETAKPRDKAYKLADGGGLYLMVNTNGSKYWRMKYRFAGKEKKLSFGIYPDIS  60
            M+L   +V TAKP++++YKLADGGG+YL++N+NGSKYWRMKYRFAGKEK LS+G+YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARTKRDEARKLLANDKDPGEVKKATLLAKKLSVTNTFEAIALEWYSAKVSGWSKSYA  120
            LA+AR KR EARK+LA + DPGE KK   +A ++S+ NTFEA+A EW  +K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DYVKRAFKNNVFPYLGSQPVNEIKPLALLSVLQKMEKRGATELASKVRQRCNEVFRYAIV  180
            D +  +F +++FPY+G +P+ EIKP+ LL  L+KMEKRGA E   KVRQRC EVFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAADLGSALQGHEKQHYPFLTAAELPDFLQKLSNYSGSlitllatrllmltgl  240
            TGRA+YNPA+DL+SAL    K H+PFLTA ELP+FL  L+ Y+GS+IT  AT+++MLTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtVELRLAEWREIDFDNRIWEIPKTRMKMKRPHVVPlsaqslsalrqlKVLTGNYKLIFA  300
            RT ELR+A+W +IDF+ ++WEIP   MKMKRPH+VP S Q ++ ++QL  ++ +  L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDVNIAMSEASINMVIKRIGYDKRATGHGFRHTMSTILHEQGFNSAWIETQLAHVDKN  360
            GRND   ++S  SIN VI  +GY  R TGHGFRHTMSTILHEQGFNSAWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMMQWYADFMDAF  389
            SIRGTYNHAQYL+GRREMMQWYAD++D++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

155) SU5_02989 in NC_017623


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  411 bits (1548),  Expect = 2e-116, Method: Compositional matrix adjust.
 Identities = 231/360 (65%), Positives = 290/360 (81%), Gaps = 0/360 (0%)

Query  2    GLSLLIDTTGSKGWRFRYRFAGKPKMISFGVYGDVSLAQARAKRDEARSMLAKGINPSEA  61
            G+ LLI++ GSK WR +YRFAGK KM+S+GVY DV+LA+AR KR EAR +LA G +P+EA
Sbjct  25   GMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEA  84

Query  62   RKANKIALQFAHENSFESVAREWHSSKKTTWSEGYAKEVLNCMERDIFPFIGQRPIEQIE  121
            +K +KIALQ +  N+FE+VAREWH +K   WS  Y  E+++  E+DIFP+IG+RPI +I 
Sbjct  85   KKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIK  144

Query  122  PLELLTVLQKIEKRGALEQTSKIRRRCGEVLRYAVATGRAKYNFAPDLAIALNKPKTQHF  181
            P+ELL  L+K+EKRGALE+  K+R+RCGEV+RYA+ TGRA YN APDLA AL  PK  HF
Sbjct  145  PMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHF  204

Query  182  PFLTESELPEFVNALDNYQGSLVTKYATQLLMLTGVRTIELRAAEWAEFDLDNALWEIPK  241
            PFLT +ELP+F+  L  Y GS++TK ATQ++MLTGVRT ELR A+W ++D++  LWEIP 
Sbjct  205  PFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPA  264

Query  242  ERMKKRRPHLVPLSTQAISILKKLQEITGNYSLVFPGRNDVRKPMSEASINKVIKLLGYH  301
            E MK +RPH+VP S Q I+++K+L+ I+ + +LVF GRND RKP+S  SIN+VI LLGY 
Sbjct  265  EVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYK  324

Query  302  GRLTGHGFRHTMSTILHELGFESAWIEMQLAHVDKNSIRGTYNHAQYLENRRKMMQIYSD  361
            GRLTGHGFRHTMSTILHE GF+SAWIEMQLAHVDKNSIRGTYNHAQYL+ RR MMQ Y+D
Sbjct  325  GRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYAD  384

156) SEEH1578_01295 in NC_021810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 219/356 (62%), Positives = 287/356 (81%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LA+AR KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+  R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E R A EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA+    K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

157) SU5_03538 in NC_017623


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 219/356 (62%), Positives = 287/356 (81%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LA+AR KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+  R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E R A EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA+    K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

158) CFSAN002069_16980 in NC_021812


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 219/356 (62%), Positives = 287/356 (81%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LA+AR KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+  R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E R A EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA+    K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

159) SeHA_C3266 in NC_011083


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  400 bits (1506),  Expect = 5e-113, Method: Compositional matrix adjust.
 Identities = 219/356 (62%), Positives = 287/356 (81%), Gaps = 0/356 (0%)

Query  1    MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVF  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG +YWR+KYR  GKEK+L+IGVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSCR  120
            LA+AR KR +A++ LAAG DP+  +K EK++ Q    N+FEA++REW Q + DRWS+  R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARRATEKVRKVRQRCGEVWKYAVV  180
            +E++ TFEKD+FPYIG RPI +IKPMELL  L K+E R A EK+RKVRQRCGEV +YA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAVIPHEKEHYAFLTQDELPEFLRTLNTYAGSVLVKIAMQLLILTGV  240
            TGRA+YNPAPDLASA+    K H++FLT +ELP+FL  L  Y+GS++ K A Q+++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RLGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP  300
            R  ELR A+W+++DFE K+W++PAE MKM+RPH+VP S Q I L++QL P++   +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNNPKKPMSDMALTVLVRRIGYAGRVTGHGFRHTMSTILHEQGFNSAWIEIQLAH  356
            GRN+P+KP+S  ++  ++  +GY GR+TGHGFRHTMSTILHEQGFNSAWIE+QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

160) intS in NC_014228


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  399 bits (1501),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 218/368 (60%), Positives = 293/368 (80%), Gaps = 0/368 (0%)

Query  1    MKLTARQVETVKPQEKDFKLSDGGGLYLLVKVNGSKYWRLKYRIAGKEKLLAIGTFPLVT  60
            M LT  +V T KP+E+ +KL+DGGG+YLL++ NGSKYWR+KYR+AGKEK+L+IG +P VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARRKRDEAKKLIAEGIDPNQDKKQKKLAAQGEISNTFESIAREWYEGRKDRWSVGYR  120
            LA+AR KR EA+K++A G DP + KK+ K+A Q  + NTFE++AREW + + DRWS+ YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDMMDAFEKDVFPYIGHRPIAEIKPLELLDLLSIMEKRGVTDKLKKVRQRCGEVWTYAII  180
            ++++D+FEKD+FPYIG RPIAEIKP+ELL+ L  MEKRG  +K++KVRQRCGEV  YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPAPDLASAFIPHQREHYAHLSVDELPEFLRSIDKYMGSQIVRTALRMLILTGV  240
            TGRA+YNPAPDLASA+   ++ H++ L+ +ELP+FL  +  Y GS I +TA ++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRKAEWSEIDLDKAVWTIPAEKMKMRCTHVVPLSEQVINLLKQIQPISGNYQYVFP  300
            R  ELR A+W +ID++  +W IPAE MKM+  H+VP SEQVI L+KQ++PIS +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SRTDYRKHISDMAINTMIRRMGYSGRATGHGFRHTMSTILHDQDYNTEWVEKQLAHVDKN  360
            +R D RK IS  +IN +I  +GY GR TGHGFRHTMSTILH+Q++N+ W+E QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYSR  368
            SIRGTY++
Sbjct  361  SIRGTYNH  368

161) ECA3460 in NC_004547


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  397 bits (1495),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 214/367 (59%), Positives = 291/367 (80%), Gaps = 0/367 (0%)

Query  37   IGDGLGLSLLIEPTGSKSWRFRYRFGGKPKMISFGAYPLVSLAEARKKRDEARKQVLDGI  96
            ++DG G+ LLI++ GSK WR +YRF+GK KM+S+G YP V+LA+AR KR EARK +  G 
Sbjct  20   LADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGG  79

Query  97   NPSEHRKAQKLNLMSESENTFETIAREWHTMKSVCWSVGYASDIMEAFRNDIFPYVGKRS  156
            +P+E +K +K+ L     NTFE++AREWH  K+  WS+ Y  +I+++F +DIFPY+GKR+
Sbjct  80   DPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRP  139

Query  157  IAEVKPLELLNVMRKMEKRGALEKMKKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVH  216
            IAE+KP+ELL+ +RKMEKRGALEKM+KVRQRC+EVFRYAI TGRA+YNPA+DL+SAL   
Sbjct  140  IAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATP  199

Query  217  QSHHFPFLKADEIPDFLRALEGYTGSKLVRIATKLLLITGVRTIELRAALWSEFDLGNAI  276
            +  HFPFL A+E+P+FL  L GYTGS + + AT+++++TGVRT ELR A W ++D+   +
Sbjct  200  KKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKL  259

Query  277  WEIPEERMKKRRAHLVPLSTQALDLLNELKIMTGNYRYVFPGRNNPNKPMSEASINQVIK  336
            WEIP E MK +R+H+VP S Q + L+++L  ++ +   VF GRN+P KP+S  SINQVI 
Sbjct  260  WEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIE  319

Query  337  RIGFGGEVTGHGFRHMLSTILHEEGFDSSFIEIQLAHVDRNSIRGTYNHAQYLEKRRHMM  396
             +G+ G +TGHGFRH +STILHE+GF+S+ IE+QLAHVD+NSIRGTYNHAQYL+ RR+MM
Sbjct  320  LLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMM  379

Query  397  QYYSDYV  403
            Q Y+DY+
Sbjct  380  QWYADYI  386

162) PAU_01009 in NC_012962


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  394 bits (1483),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 241/392 (62%), Positives = 316/392 (81%), Gaps = 3/392 (0%)

Query  1    MKLTARQIDTAKPKDKSYKLSDGGGMYLEIFPNGSKCWRLKYRFAGKEKRLAFGTYPTVT  60
            M LT  ++ TAKPK+++YKL+DGGGMYL I +NGSK WR+KYRFAGKEK L++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaearkkredakkILANGNDPGLVKRQEKREKALIINNSFEKIALEWHTYKLPNWSKGYA  120
            LA+AR KR +A+KILA G DPG  K++EK    + ++N+FE +A EWH  K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDLLEGFTKDIFPFIGKHAITDIKPLDMLTVLRKMEQRGVLDKLKKIRQACNQVFRYAIV  180
            +++++ F KDIFP+IGK++I++IKP+++L  LRKME+RG L+K++K+RQ C +VFRYAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPTAELAGALATPKAKHFPHLNVDELPAFLQALSFYSGSKITQIAtklllltgl  240
            TGRA+YNP+++LA+ALATPK  HFP L  +ELP FL  L+ Y+GS IT+ AT++++LTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  rtielRASTWTEIDFDKAIWEIPQERMKMRRPHIVPLSEQalallkelaaITGRFNFVFH  300
            RT ELR + W +IDF+  +WEIP E MKM+RPHIVP SEQ +AL+K+L +I+ +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDASKPMSEAAINAINQVLKRIGYDGRATGHGFRHTMSTILHEQGYNTAWIETQLAHV  360
            GRND+ KP+S  +IN + ++L   GY GR TGHGFRHTMSTILHEQG+N+AWIE QLAHV
Sbjct  301  GRNDPRKPISKESINQVIELL---GYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  361  DKNSIRGTYNHAQYLDGRREMLQWYADYMDML  392
            DKNSIRGTYNHAQYLDGRREM+QWYADY+D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

163) ENC_24500 in NC_021046


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  387 bits (1455),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 222/389 (58%), Positives = 301/389 (78%), Gaps = 2/389 (0%)

Query  1    MKLNARQVETAKPAEKDYKLPDGNGLILLVKTSGAKYWRYRYTFAGKEKMLALGVYPAVS  60
            M L   +V TAKP E+ YKL+DG G+ LL++++G+KYWR +Y FAGKEKML++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaaarekrdearrNVAAGVDPVKAKSHVaaaaaKTI--TFKEIATEWHEFKKPRWSPGYA  118
            LA AREKR EAR+ +AAG DP  AK +   A   ++  TF  +A EWH+ K  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  SDILEAFNKDIFPAVGKLPVAEIEPVQMLTALRKIENRGATEKAAKTRRWCGEVFSYAVA  178
             +I+++F+KDIFP +GK P+AEI P+++L ALRK+E+RGA EK  K R++CGEVF YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  TGRAKYNPVSELNSAMTGHKGESFPFLTAEELPDFLAALESYKGSPLPRLGLQIMMLAGL  238
            TGRA YNP ++L SA++  K   FPFLTA+ELP+FL+ L +Y GS + + + QI+ML+G+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RTYELRHSKWEWVDFDNQLWEIPAEFMKTDRPHLVPLSEQLVVLLKELHGLTGRYVNMFP  298
            RT ELR + WE +DF+ +LWEIPAE MK  RPH+VP SEQ++ L+K+L+ ++ +   +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  299  GRNDPSKVMSENTINRMIHTLGYKGRVVGHGFRHTFSTILNDKGFNSDWVELQIAHVDKN  358
            GRNDP K +S ++IN++I+ LGYKGR+ GHGFRHT STIL+++GFNS W+E+Q+AHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  NIRGVYNHALYMEGRREMMQWYADYIDQL  387
            +IRG YNHA Y++GRREMMQWYADYID L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

164) PputGB1_0681 in NC_010322


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  387 bits (1454),  Expect = 7e-109, Method: Compositional matrix adjust.
 Identities = 209/390 (54%), Positives = 294/390 (76%), Gaps = 0/390 (0%)

Query  1    MPLTALQVKNAAPRERDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTVDKVT  60
            M+LT ++VK A P+ER Y LADGGG++L I A G+K WR ++R+ GK+  +S+G    VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARQLASESRQLVAQGRHPGLERKVARAQAAISRANTFKSLALEWHQHKSQRWSVGYA  120
            LA+AR+  SE+R+++A G +PG  +K  +    +S  NTF ++A EWHQ K++RWS+ Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  NDVMEAFELDIFPLLGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
            ++++++FE DIFP +G  P+++IKPM+ L+ +R++E RGALEK+RKVRQRC EV+R+AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPISDIGGALQTPTSRHYPFLPIAELPELIRSFQACPGHDVVKIATRLLILTGV  240
            TGRA+YNP +D+++AL TP   H+PFL   ELP+++  + +  G  + K AT++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTAELRGALWSEFDLKDALWQIPASRMKMRRAHLVPLSKQAVAALSELEGITGGYTLAFP  300
            RT ELR A W ++D+   LW+IPA  MKM+R+H+VP S Q +A + +LE I+    L F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYRSEWVETQLAHVDKN  360
            GRNDP KP+S  +INQ++   GY GR TGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYAEHLEALS  390
            SIRGTYNHAQYL+GRREM+QWYA+ +++LS
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

165) A225_1439 in NC_018106


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  386 bits (1450),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 211/362 (59%), Positives = 295/362 (82%), Gaps = 0/362 (0%)

Query  1    MNPNGSRYWRLKYRIAGKEKLLALGVYPDITLAVARQKRADAKKVLAAGGDPGqekqeek  60
            +N+NGS+YWR+KYR+AGKEK+L++GVYPD+TLA AR+KR++A+K+LAAGGDPG+ K+EEK
Sbjct  30   INANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEK  89

Query  61   qakeqaVANSFERLAMEWHSHKSTSWSEGYAEHLLMYLKKDIFPFIGQKAITDISQVEML  120
             A + ++ N+FE +A EWH  K+  WS  Y ++++  + KDIFP+IG+++I++I  +E+L
Sbjct  90   IALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELL  149

Query  121  NVLRKMEQRGVLDKLKKTRQACRQIFTYAIITGRAEHNPVSDLAGALKPPKQQHYPHLLV  180
            + LRKME+RG L+K++K RQ C ++F YAI+TGRA+ NP +DLA+AL  PK+ H+P L  
Sbjct  150  EALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTA  209

Query  181  DQIPDFLRALNEYSGSTITRNATRLLMLTGLRTIELRASEWVDIDFDKGIWNIPAERMKM  240
            +++P+FL  L  Y+GS IT+ AT+++MLTG+RT ELR ++W DIDF+  +W+IPAE MKM
Sbjct  210  NELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKM  269

Query  241  RRPHLVPLSTQVRELLEEIHQLTGRGKYVFPGRNDAGKPMSEASINQVIKRIGYDGKATG  300
            +RPH+VP S QV  L+ +++ ++ +   VF GRND+ KP+S  SINQVI  +GY G+ TG
Sbjct  270  KRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTG  329

Query  301  HGFRHTMSTILHERGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRRDMLQWYADYMAAL  360
            HGFRHTMSTILHE+G+N+AWIE QLAHVDKNSIRGTYNHAQYLDGRR+M+QWYADY+ +L
Sbjct  330  HGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

Query  361  EN  362
             +
Sbjct  390  SE  391

166) CFSAN001992_09575 in NC_020307


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  386 bits (1451),  Expect = 1e-108, Method: Compositional matrix adjust.
 Identities = 220/389 (57%), Positives = 300/389 (78%), Gaps = 2/389 (0%)

Query  1    MKLNARQVETAKPGEKDYKLPDGNGLILLVKTSGAKYWRYRYTFAGREKMLALGVYPAVS  60
            M L   +V TAKP E+ YKL+DG G+ LL++++G+KYWR +Y FAG+EKML++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaaarekrdearrNVAAGVDPVKVKSHVaaaaaNSI--TFKDIAIEWHEFKKPRWSPGYA  118
            LA AREKR EAR+ +AAG DP   K +   A   S+  TF  +A EWH+ K  RWS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  SDILEAFNKDIFPAVGKLPVAEIEPVQMLTALRKIENRGATEKAAKTRRWCGEVFSYAVA  178
             +I+++F+KDIFP +GK P+AEI P+++L ALRK+E+RGA EK  K R++CGEVF YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  TGRAKYNPVSELNSAMTGHKGESFPFLTAEELPDFLAALEGYKGSPLPRLGLQIMMLAGL  238
            TGRA YNP ++L SA++  K   FPFLTA+ELP+FL+ L GY GS + + + QI+ML+G+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RTYELRHSKWEWVDFDNRLWEIPAEFMKMDRPHLVPLSDQLVVLLKELHGLTGRFVNMFP  298
            RT ELR + WE +DF+ +LWEIPAE MKM RPH+VP S+Q++ L+K+L+ ++ +   +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  299  GRNDPSKVMSENTINRMIHTLGYKGRVVGHGFRHTFSTILNDRGFNSDWVELQIAHVDKN  358
            GRNDP K +S ++IN++I+ LGYKGR+ GHGFRHT STIL+++GFNS W+E+Q+AHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  NIRGVYNHALYMEGRRGMMQWYADFIDQL  387
            +IRG YNHA Y++GRR MMQWYAD+ID L
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

167) PST_0259 in NC_009434


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  385 bits (1448),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 207/391 (53%), Positives = 293/391 (75%), Gaps = 0/391 (0%)

Query  1    MPLTALQVKSAAPRESDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVT  60
            M+LT ++VK+A P+E  Y LADGGG++L I A G+K WR ++R+ GK+  +S+G    VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVQARQLASDARQLVAQGRHPGLERKAMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYA  120
            L +AR+  S+AR+++A G +PG  +K  +    MS  NTF ++A EWHQ KA RWS+ Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GDVMEAFELDVFPQVGNLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
            ++++++FE D+FP +G+ P+++IKPM+ L+ +R++E RGALEK+RKVRQRC EV+R+AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPIADIGGALQTPTSRHYPFLPIAELPALIRSIQACPGHDVVKIATRLLILTGV  240
            TGRA+YNP +D+++AL TP   H+PFL   ELP ++  + +  G  + K AT++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTAELRGAPWSEFDLDQALWLIPAARMKMRRAHLVPLSNHAVAALRELERITGGYTLAFP  300
            RT ELR A W ++D++  LW IPA  MKM+R+H+VP S++ +A +++LE I+    L F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKN  360
            GRNDP KP+S  +INQ++   GY GR TGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYANHLDELHD  391
            SIRGTYNHAQYL+GRREM+QWYA+ +D L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

168) Psest_4016 in NC_019936


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  384 bits (1443),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 206/391 (53%), Positives = 292/391 (75%), Gaps = 0/391 (0%)

Query  1    MPLTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHISLGTIDKVT  60
            M+LT ++VK+A P+   Y LADGGG++L I A G+K WR ++R+ GK+  +S+G    VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARQLASDARQLVAQGRHPGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYA  120
            LA+AR+  S+AR+++A G +PG  +K  +    MS  NTF ++A EWHQ KA RWS+ Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GDVVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA  180
            ++++++FE D+FP +G  P+++IKPM+ L+ +R++E RGALEK+RKVRQRC EV+R+AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGV  240
            TGRA+YNP +D+++AL TP   H+PFL   E+P ++  + +  G  + K AT++++LTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTAELRGVPWSEFDLDKALWLIPAARMKMRRAHLVPLSQQAVAVLRELERITGGYTLAFP  300
            RT ELR   W ++D++  LW IPA  MKM+R+H+VP S+Q +A++++LE I+    L F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  GRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQLAHVDKN  360
            GRNDP KP+S  +INQ++   GY GR TGHGFRHTMST LHEQG+ S W+E QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  SIRGTYNHAQYLEGRREMLQWYANHVDELHD  391
            SIRGTYNHAQYL+GRREM+QWYA+ +D L +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

169) SBG_2173 in NC_015761


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 209/389 (54%), Positives = 296/389 (77%), Gaps = 2/389 (0%)

Query  1    MALTNVQIKNAAPGETDYTLSDGSGLFIIIKPQGSKLWRFRYRREGKLRRLSLGAYPEIS  60
            MALT+V++K A P E  Y L+DG+G++++I+++GSK WR +YR  GK + LS+G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSQARIKAAEARAKLAQGISPVDERREQKEASKVI--NSFEGVCLEWQATRKATWSESYA  118
            L++AR K +EAR  LA G  P + ++E+K A ++   N+FE+V  EW+ T+   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  DDTKRLFERNVFPVLGARPIGDIQPLELLDLLRKIEDRGANELATKVRRRCGEVYAYAIV  178
            D+    FE+++FP +G RPI++I+P+ELL+ LRK+E RGA E   KVR+RCGEV+ YAIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  TGRAKYNPARDLATAMQRFQRGHYASLDTADLPAFLTALEATTGNIMVNLAVRLLMLTGL  238
            TGRA YNPA DLA+A+   ++ H++ L + +LP FLT L + TG+I+ + A +++MLTG+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RPGELRKGEWKEIDIDNALWEIPAERMKARRPHLVPLSKQAIELLRSVKAISGNYSLMFP  298
            R  ELR ++W +ID++  LWEIPAE MK +RPH+VP S Q I L++ + +IS + +L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  299  GRNDVTRPMSDMAMNQLIKRCGYGEKLTGHGFRHMMSTILHEKGFNSAWIELQLAHVDKN  358
            GRND  +P+S  ++NQ+I   GY  +LTGHGFRH MSTILHE+GFNSAWIE+QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  359  TIRGTYNRAQYLEGRREMMQWYADHLQSL  387
            +IRGTYN+AQYL+GRREMMQWYAD ++SL
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSL  389

170) YPA_0385 in NC_008150


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  372 bits (1397),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 211/331 (64%), Positives = 271/331 (82%), Gaps = 0/331 (0%)

Query  9    VTVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYR  68
            ++ AR KR EA+KI+A+GGDP++ K++EK+A Q    NTFEA++REW Q + DRWS  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  69   LEMMSTFESDVFPYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAII  128
             E++ TFE D+FPYIG RPI EIKP+EL+  L K+EKRGA EKMRKVRQRCGEV +YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  129  TGRAEYNPAPDLASAFAPHKREHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGT  188
            TGRA+YNPAPDLASA+A  K+ H+P LT NE+P+FL+ LA+Y+GS++ K A ++++LTG 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  189  RPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP  248
            R  ELR A+W ++DF+  LWEIPA  MKM+RPH+VP ++Q I+++KQ++PIS +  +VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  249  GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKN  308
            GR +  KPIS  ++N +I  +GY GR TGHGFRHTMSTILHEQGFN+AWIE QLAHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  309  SIRGTYNHAQYLDGRREMLQWYADYMDSLEN  339
            SIRGTYNHAQYLDGRREM+QWYADY+DSL +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

171) M495_08725 in NC_021741


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  368 bits (1382),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 204/392 (53%), Positives = 298/392 (77%), Gaps = 4/392 (1%)

Query  1    MKLNARQVDTAKPKDKDYKMPDGNGLFLLVKTSGAKYWRFRYTFAGREKMLAIGVYPAVS  60
            M L   +V TAKPK++ YK++DG G++LL++++G+KYWR +Y FAG+EKML+IGVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSVARDKRDEARRSVAAGEDPVIVKNRGAATKA----TTFKEIANEWHEFKKPGWSAVYA  116
            L+ AR+KR EAR+ +AAG DP   K+    +       TF  +A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  117  EDILEAFEKDIYPAVGRLPVSEIEPVQMLTALRVIENRGATEKASKTRRWCGEVFGYAVA  176
            ++I+++FEKDI+P +G+ P++EI P+++L ALR +E+RGA EK  K R++CGEVF YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  177  TGRAKYNPVSELRKAMKGHKGVsfpfleaeelpeflsaVDGYLGSPLPKLGIKIMMLAGM  236
            TGRA YNP ++L  A+   K V FPFL A+ELP+FL+ + GY GS + K + +I+ML+G+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  237  RTRELRYSRWDWVDFDNALWEIPAEFMKMGRPHLIPLSKQLITLLKELYALTGRFENMFP  296
            RT+ELR+++W+ +DF+  LWEIPAE MKM RPH++P S Q+I+L+K+L +++ +   +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  297  GRVNPTRVMCENTINKMIHAIGYKGRVVGHGFRHTFSTILNDQGFNPDWVEIQIAHVDKN  356
            GR +P + +  ++IN++I+ +GYKGR+ GHGFRHT STIL++QGFN+ W+E+Q+AHVDKN
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  357  KIRGVYNHALYLEGRREMVQWYSDYVDQLKGV  388
             IRG YNHA YL+GRREM+QWY+DY+D L  +
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSEL  392

172) ECNA114_4679 in NC_017644


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  351 bits (1317),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 199/393 (51%), Positives = 291/393 (75%), Gaps = 4/393 (1%)

Query  1    MPLTVRQIESAKPADKDYKLSDGQGLYLLVKKSGSRYWNLKYRFAGKEKKLVIGVYPDIS  60
            M+LT  ++ +AKP ++ YKL+DG G+YLL++ +GS+YW +KYRFAGKEK L IGVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARQKRDEARKLLAEGKDPSYEKQALKFAIRESMACTFRTIAEELLTHMARRWTAGYQ  120
            LA+AR+KR EARK+LA G DP+  K+  K+A++ S+  TF ++A E     A RW+  Y+
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ADQRARLENHVFPALGNRPVTGIRPMEILNVLRVIEEQGKLEALRKTRQLCAQVFDYAIA  180
             +    +E+++FP +G+RP++ I+PME+L+ LR +E +G LE +RK RQ C++VF YAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATVNPASTLSGVLLPPEKQQRRTLSEEQMGAFMHQMTA-SGNLMS-LATRMLVLTAV  238
            TGRA  NPA+ L++ L  P K +   L+ +++  F+ ++++ +G++++  AT++++LT+V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RTGELRLASWDEINFTEALWVIPKERMKMRRPHVVPLSRQVLALLKEIKTRTESRHSAFI  298
            RT ELR+A W++I+F   LW IP E MKM+RPH+VP S QV+AL+K++   +  +   FI
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  299  IPGAFRKDRPRGRKCINEFLEQSGWHALTTAHGFRHTFSTILHDHDFSSAWIELQLAHVD  358
                 RK  P ++  IN+ +E  G  +  T+HGFRHT STILH+++F+SAWIE+QLAHVD
Sbjct  301  GRNDPRK--PISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  359  KNVMRGTYNHAQYLDGRREMMQWYADYIDSLSS  391
            KN +RGTYNHAQYLDGRREMMQWYADYIDSLS 
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

173) CDCO157_0285 in NC_017906


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  346 bits (1300),  Expect = 8e-97, Method: Compositional matrix adjust.
 Identities = 183/296 (62%), Positives = 242/296 (82%), Gaps = 0/296 (0%)

Query  35   AVQTESENAFEKIAREWHQLKSAKWSAGYASDIMEAFKNDIFPYVGTRPVGEIKPLELLN  94
            A+Q    N+FE +AREWHQ K+ +WS  Y  +I+++F +DIFPY+G RP++EIKP+ELL+
Sbjct  91   ALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLE  150

Query  95   VLRKIEKRGALEKMRKVRQRCSEVFRYAIATGRAEYNPAADLSSALEVHQSNHFPFLKAD  154
             LRK+EKRGALEKMRKVRQRC+EVFRYAI TGRA+YNPA+DL+SAL   +  HFPFL A+
Sbjct  151  ALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTAN  210

Query  155  EIPDFLRALEGYSGSKLVQIATKLLMITGVRTIELRAALWQEFDLDNAIWEIPAERMKMR  214
            E+P+FL  L GY+GS + + AT+++M+TGVRT ELR A W+++D++  +WEIPAE MKM+
Sbjct  211  ELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMK  270

Query  215  RPHLVPLSSQAVDLLNELKIMTGNYRYVFPGRNDPNRPMSEASINQAIKRIGYGGKVTGH  274
            RPH+VP S Q + L+++L  ++ +   VF GRNDP +P+S  SINQ I  +GY G++TGH
Sbjct  271  RPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGH  330

Query  275  GFRHTLSTILHEQGFESAWIEIQLAHVDKNSIRGTYNHAQYFSGRKSMMDWYSNLI  330
            GFRHT+STILHEQGF+SAWIE+QLAHVDKNSIRGTYNHAQY+ GR+ MM+WY++ I
Sbjct  331  GFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYI  386

174) ECED1_5046 in NC_011745


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  344 bits (1292),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 202/393 (52%), Positives = 285/393 (73%), Gaps = 4/393 (1%)

Query  1    MPLTVRQIESAKPADKDYKLSDGQGLYLLIKKSGARYWNLKYRFAGKEKKLVIGVYPGIS  60
            M+LT  ++ +AKP ++ YKL+DG G+YLLI+ +G++YW +KYRFAGKEK L IGVYP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LALARQKRDEARKLLAEGKDPSYEKQASKHALRESIACTFCTLAEELFTHMACRWTAGYL  120
            LA AR+KR EARK+LA G DP+  K+  K AL+ S+  TF ++A E     A RW+  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ADQRARFENHINPMLGKRPVADIRPLEILNALRVIEKNGKLEALRKTRQLCSQIFDYAIA  180
             +    FE++I P +GKRP+A+I+P+E+L+ALR +EK G LE +RK RQ C+++F YAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRATINPASTLSSVVLHPEKQQRRMLSEEQLGAFMYQMK--VSGNFMSLVTQILVLTAV  238
            TGRA  NPA+ L+S +  P K +   L+ ++L  F+ ++    ++ +    TQI++LT+V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RTGELRLATWDEIDFTNALWVIPKERMKMRRPHVVPLSHQTQMLLKEIKIITAPRNSELV  298
            RT ELR+A W++IDF   LW IP E MKM+RPH+VP S+Q   L+K++  I+  ++  LV
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPIS--KHHPLV  298

Query  299  IPGVYRDNQPRGRGCINEFLQQVGWHTFTTAHGFRHTFSTILHDHDFSSAWIELQLAHVD  358
            + G     +P ++  IN+ ++ +G     T+HGFRHT STILH+++F+SAWIE+QLAHVD
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  359  KNIMRGTYNHAQYLDGRREMMQWYADYIDSLSE  391
            KN +RGTYNHAQYLDGRREMMQWYADYIDSLSE
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

175) vinT in NC_021232


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  334 bits (1252),  Expect = 6e-93, Method: Compositional matrix adjust.
 Identities = 197/388 (51%), Positives = 278/388 (72%), Gaps = 9/388 (2%)

Query  2    LTVKQIEAAKPKDKPYRMLDGNGLYLYVPASGKKVWQLRYKLDGKEKVLTLGKYPLMSLQ  61
            LT  ++ +AKPK++PY++ DG G+YL + A+G K W+++Y++ GKEK+L++G YP ++L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDVSVGVDPVKAKK-------LSVKDNSFSAIYHEWYDHKRQVWSEGYAD  114
            +AR+K   ARK ++ G DP  AKK       +S+K N+F A+ +EW + K + WS  Y D
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLK-NTFEAVAREWHQTKADRWSLRYRD  121

Query  115  ELSRMFRDDILPMIGYLEIQDIEPMQILEVIRRFEERGAMERANKARRRCGEVFRYAIVT  174
            E+   F  DI+P IG   I +I PM++LE +R+ E RGA+E+  K R+RCGEVFRYAIVT
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  175  GRAKYNPAPDLADAMKGYRKKNYPFLPADQIPAFNNALSGFSGSIISKIATQVLQYTALR  234
            GRA YNPAPDLA A+   +K ++PFL A+++P F   L+G++GSII+K ATQ++  T++R
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  235  TKELRSMQWENVDFENRMITIDEEVMKGRRVHVVPMSDQVINLLNTLKPITSPVSSFVFA  294
            T+ELR  +WE++DFE ++  I  EVMK +R H+VP S+QVI L++ L PI+    ++VF 
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH-HPLVFI  300

Query  295  GRNDKKKPISENAVLLVIRQIGYEGLASGHGFRHQFSTIMNEHGWPADAIEKQLAHTASG  354
            GRND +KPIS +++  VI  +GY G  +GHGFRH  STI++E+G  +  IE QLAH    
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  355  SIRGIYNHAQYLDKRREMMQWWADYIDG  382
            SIRG YNHAQYLD RREMMQW ADYID+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDS  388

176) MYA_1732 in NC_017920


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  328 bits (1230),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 189/386 (49%), Positives = 277/386 (72%), Gaps = 1/386 (0%)

Query  1    MPLTDVAVRAAKPREKSYKLADGQGMYLEIMPNGSKYWRLKYRIDGKEKRMALRVYPAVT  60
            M+LTDV V++AKP+E++YKLADG GMYL I +NGSKYWR+KYR+ GKEK +++ VYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LLAARKARDEIKDQLRAGLDPSHEKKRVKAQRSLDRENSFEPIAREWHQQKKGAWSERHA  120
            L  AR  R E +  L AG DP++ KK  K    +   N+FE++AREWHQ K + WS R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DRIMKLLERELFPAIGARPIAEIMAPELLAVIRKIEARDAIELAHKTIQATSQIFRYAIA  180
            D I+  +E+++FP IG RPIAEI + ELL  +RK+E R+A+E  +K  Q  +++FRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDSAPDLRGALKPRFVVHMRRVSEAELPELMRQISAYDGDFQTRLALQFMALTFV  240
            TGRA+ ++APDL +AL     VH   ++  ELP+++ ++++Y G + T+ A Q++ LT V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTSELRFAEWTEID-EKKEWRIPPEKMKMRTPHIVPLSTQALEVIAKLPELNGHSQFLFP  299
            RT ELRFA+W +ID E K W IP+E MKM+ PHIVP S Q + ++ +L  ++ H  ++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  300  SRSSSKKPMSENTILYALYRMGYHSRMTGHGFRGLASTILNEHSFNRDWIERQLAHSERD  359
            +R+ ++KP+S ++I   +  +GY +R+TGHGFR   STIL+E++FN  WIE QLAH +++
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  GVRAAYNHAEYLPERRKMMQWWSNYL  385
            ++R++YNHA+YL  RR MMQW ++Y+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYI  386

177) intC in NC_013508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  327 bits (1227),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 195/387 (51%), Positives = 268/387 (70%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKDKPYRLLDSNGLYLYIPASGKKVWQLRFKLGGKEKILTVGKYPLVSLQ  61
            LT  ++ +AKPK++PY+L D+ G+YL I A+G K W+++++++GKEK+L++G YP V+L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAYQARKDIADGIDPVRTKKESEKD------NSFSVIYKEWYAHKRQVWSEGYANE  115
            +AR+K  +ARK +A G DP  +KKE          N+F  + +EW   K + WS  Y +E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LQRMFETDILPLIGAMEMDEIEPMALLSVVRRIEERGAMERANKARRRCGEVFRYAIVTG  175
            +   FE DI+P IG   + EI PM LL  +R++E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPAEQIPAFNQALAGYSGSIVSKIATMVLQYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LAGY+GSI++K AT ++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMKWPNVDFTSGLITIDESEMKSRKPHIVPMSHQVAELLKALKPVTEPVSQFVFAG  295
            +ELR   W ++DF + L  I    MK ++PHIVP S+QV  L+K L P++     +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH-HPLVFIG  301

Query  296  RNDKNKSISENAVLLVIRQIGYEGLASGHGFRHQFSTILHEHEWPSEAIERQLAHTDKQS  355
            RND  K+IS +++  VI  +GY G  +GHGFRH  STILHE+   S  IE QLAH DK+S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDG  382
            +RG YNHAQYLD RREMMQW AD ID+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

178) EbC_31530 in NC_014306


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  327 bits (1227),  Expect = 5e-91, Method: Compositional matrix adjust.
 Identities = 190/387 (50%), Positives = 278/387 (72%), Gaps = 7/387 (1%)

Query  2    LTVKQIDAAKPKDKPYRLLDSNGLYLYVPVSGKKVWQLRYKIEGKEKVLTVGKYPLMSLQ  61
            LT  ++ +AKPK++PY+L D+ G+YL +  +G K W+++Y++ GKEK+L++G YP ++L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWLARKDVSGGVDPIKAKK------QLARVNTFGAIYREWYEHKRQVWSLKYAEE  115
            +AR+K   ARK +++G DP  AKK      Q++  NTF A+ REW + K + WSL+Y +E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LGRMFADDVLPMIGDMEISEIEPMQILSVIRLYEERGAMERANKARRRCGEVFRYAIITG  175
            +   F  D++P IG   I+EI PM++L  +R  E RGA+E+  K R+RCGEVFRYAI+TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNYPFLPSDQIPAFNQALAGYSGSVVSRVATQFLQYTALRT  235
            RA YNPAPDLA A+   +K ++PFL ++++P F   LAGY+GS++++ ATQ++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  IEMRSLKWTDIDLATKTITIPPEVMKGRRAHIVPLSDQVITLLESLRPITQPVSLFVFAG  295
             E+R   W DID+ +K   IP+EVMK +R+HIVP S+QVI+L+  L PI++  +L VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL-VFIG  301

Query  296  RNDKKKSLSDNAVLQVIRQIGYEGLASGHGFRHQFSTIMNEHEWPNDAIERQLSHHDSGT  355
            RND +K++S +++ QVI  +GY G  +GHGFRH  STI++E+   +  IE QL+H D  +
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  IRGIYNHAQYLEKRREMMQWWADWIDG  382
            IRG YNHAQYL+ RREMMQW AD ID+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

179) GEM_3075 in NC_018513


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  324 bits (1217),  Expect = 4e-90, Method: Compositional matrix adjust.
 Identities = 190/389 (49%), Positives = 273/389 (71%), Gaps = 3/389 (0%)

Query  1    MSLTDTAVRNLKPSDKPYKLADGGGMYLHVTPNGGKYWRLAFRLHGKQKIYALGVYPQVS  60
            M+LTD  V+  KP ++PYKLADGGGMYL + +NG+KYWR+ +R+ GK+K+ ++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARQMRDEAKKLIKQGIDPVIERKQTVRRRSEEQATTFELIAREWHKTKRSAWTESHA  120
            LA+AR+ R EA+K++  G DP   +K+           TFE +AREWH+TK   W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KKIMNSLEADIFPRLGDRPIGSISAPDLLMALRVIEKRGALEIAGRVLQRCNAVFRYAVA  180
              I++++E DIFP +G RPI+ I + +LL ALR +EKRGALE   +V QRC  VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRIVANPAAELRGALKTPERKHHAALAHDELPEFLAKLAGYDGDPQTRLGLQLMVHTFV  240
            TGR   NPA++L +AL TP + H + L+ +ELP+FL+ LAGY G   T+ + Q+++ T V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRAASWAEFNLELSEWRIPAERMKMREEHIVPLSKQAVALLRQLQAVGAGSDLVFP  300
            RT ELR A W ++++E   W IPAE MKM+  HIVP S Q +AL++QL++++    LVF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SGNGRRNKWISENTLLYALYRLGYHSRATGHGFRATASTILNEMGFHPDWIERQLAHAER  360
            + N+ R+  IS +++   +  LGY +R TGHGFR T STIL+E GF++ WIE QLAH ++
Sbjct  301  GRNDPRKP-ISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  361  NKVRAAYNRALYLAERRQMMQVW-SDYLD  388
            N +R++YN+A YL  RR+MMQ W +DY+D
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYID  387

180) GM21_1254 in NC_012918


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  320 bits (1202),  Expect = 6e-89, Method: Compositional matrix adjust.
 Identities = 184/392 (47%), Positives = 274/392 (70%), Gaps = 3/392 (0%)

Query  1    MPLTDVKVRTAKPGEKQVKLSDGDGMYLLVTPNGGKCWRLKYRFGGKEKVLALGTYPEIS  60
            M+LTDVKV+TAKP E+  KL+DG+GMYLL+ +NG+K WR+KYRF+GKEK+L++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARQRRHEARKLLANGVDPNEIKKAQKAATITETENSFEVVAREWHQKFSPSWSGVHS  120
            L DAR++R EARK+LA G DP E KK +K A      N+FE VAREWHQ  +  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DTTLRRLQADVFPAIGARPISEIKAPDALAMLRRIESRGALETAHRIRTICGQVFRYAVA  180
            D  +  ++ D+FP IG RPI+EIK+ + L  LR++E RGALE  +++R  CG+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDCTADLKGALPPCKKSHLAAITDPKAVAPLLRAIDGYQGTIPVKSALQLAAMFF  240
            TGRA+ + ++DL +AL+  KK H++ +T ++ ++ +L  + GY G+I  K+A Q+  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRQAEWSEIDFENALWNIPASRMKMKEPHIVPLASHAIAILKELQALTGRSRFLF  300
            VR  ELR A+W +IDFE  LW+IPA  MKMK PHIVP + + IA++K+L++++ +  ++F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  301  PSGRSFTRPMSNNAINAALRRMGFDKDEMTGHGFRAMARTILDEVLQFRPDFIEHQLAHA  360
             +     +P+S+++IN  +  +G+ K+ +TGHGFR    TIL+E   F +  IE QLAH 
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  361  VKDPNGRAYNRTAHLAERRKMMQTWAEYLDDL  392
             K++   +YN++  L  RR MMQ  A+Y+D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

181) RSc0968 in NC_003295


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  318 bits (1193),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 198/391 (51%), Positives = 289/391 (74%), Gaps = 1/391 (0%)

Query  1    MPLTDLSARNAKPQDKPYRLADGLGMYLEVMPNGSKYWRLKYRIAGKEKRLALGVYPSVG  60
            M+LTD+  + AKP+++PY+LADG GMYL + +NGSKYWR+KYR+AGKEK L++GVYP V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laqartarddarrliaaGTDPSQARKEAKLATTTARTHTFEVVAREWHEKQSATWVPTYA  120
            LA+AR  R +AR+++AAG DP++A+KE K+A   +  +TFE VAREWH+ ++  W   Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  TKVLHSLETDIFPDLGARPITEITAPQMLATLRKVESRDALETVARLQQRCSAVFRYAVV  180
              +++++E DIFP +G RPI+EI + ++L +LRK+E R+ALE + +++QRC+ VFRYA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAAHNPCTDLKGAFKTAKVQHMARVQANEVPTLIKNIRGYDGDLITRIALQFMALTFV  240
            TGRA  NP  DL +A+ T+K  H + + ANE+P ++ ++ GY G +IT+ A Q++ LT V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTKELIGAQWSEIDFETEEWRIPAERMKMREPHFVPLSWQAIALLRAAEKMTGNRQYVFQ  300
            RT+EL  A+W +IDFE+  W IPAE MKM+ PH+VP S Q IAL++  E ++ ++  VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SPKG-RTHISNNTILYALYRLGYHSRMTGHGFRGLASTMLHEQGFNPDVIERQLAHAERN  359
            + ++ R  IS+++I   +  LGY +R+TGHGFR   ST+LHEQGFN+  IE QLAH ++N
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  KVRAAYNHAQYLPERRRMMQHWADHLDQLAQ  390
             +R++YNHAQYL  RR MMQ  AD +D L++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

182) intC in NC_017663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  316 bits (1184),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 187/387 (49%), Positives = 270/387 (70%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYANE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y +E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPEFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P+F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A+VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHAQYLD RREMMQW AD ID 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

183) EKO11_1417 in NC_016902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  314 bits (1178),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 187/387 (49%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHAQYLD RREMMQW AD ID 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

184) intS in NC_017635


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  314 bits (1178),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 187/387 (49%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHAQYLD RREMMQW AD ID 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

185) intS in NC_017664


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  314 bits (1178),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 187/387 (49%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWIDE  382
            +RG YNHAQYLD RREMMQW AD ID 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

186) UMNK88_2903 in NC_017641


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  314 bits (1177),  Expect = 5e-87, Method: Compositional matrix adjust.
 Identities = 187/387 (49%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A+VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEKQLAHANSGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  IRGIYNHAQYMDKRREMMQWWADWIDE  382
            IRG YNHAQY+D RREMMQW AD ID 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

187) i14_4873a in NC_017652


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1173),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHSTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGSHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

188) i02_4873a in NC_017651


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1173),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHSTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGSHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

189) intS in NC_011748


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1175),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 187/388 (49%), Positives = 268/388 (70%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHAQYLD RREMMQW AD +D+L
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSL  389

190) O3M_07705 in NC_018650


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1175),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 187/388 (49%), Positives = 268/388 (70%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHAQYLD RREMMQW AD +D+L
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSL  389

191) O3O_17880 in NC_018661


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1175),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 187/388 (49%), Positives = 268/388 (70%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHAQYLD RREMMQW AD +D+L
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSL  389

192) O3K_07755 in NC_018658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1175),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 187/388 (49%), Positives = 268/388 (70%), Gaps = 7/388 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDGL  383
            +RG YNHAQYLD RREMMQW AD +D+L
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDSL  389

193) ECO26_3335 in NC_013361


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  313 bits (1174),  Expect = 8e-87, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 268/387 (70%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMRGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIDANVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A+VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

194) intS in NC_011750


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKSVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W  +DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICDNAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

195) CE10_2735 in NC_017646


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKSVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W  +DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICDNAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

196) intB in NC_005085


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  312 bits (1171),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 184/389 (48%), Positives = 275/389 (71%), Gaps = 2/389 (0%)

Query  1    MPLTDTAIRNAKPREDGKPAKLADGGSLFLWVMPNGAKYWRMAYRFDGKQKTLAFGVYPT  60
            M+LTD  ++ AKP+E  +P KLADGG+++L + +NG+KYWRM YRF GK+K L++GVYP 
Sbjct  1    MALTDVKVKTAKPKE--RPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  61   TSLKDAREKREAARKLLAAGTDPNAAKKEQKRERQLTVENSFEIVAREWYDKQLPRWTDD  120
             +L DAREKR  ARK+LAAG DP  AKKE+K   Q+++ N+FE VAREW + +  RW+  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  HAVRILDSLKADAFPDLGKLPVSQLTAPVILDTIRKIEKRGAVETAQRVLQRISAVIRYA  180
                I+D++  D FP +GK P++++ +  +L+++RK+EKRGA+E  ++V QR + V+RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  IQTGRAVHNPATDLTGAIRAKKVEHRPALPRGELREFYRRLAAEPLYIPTRIAMHLLMLT  240
            I TGRA  NPA DL++A+ + K  H P L   EL +F   LA+    I T+ A +++MLT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  FVRPGELRAARWEEFDEERAEWRIPAERMKMREPHLVPLSRQALELLKELRPLTGKSALL  300
             VR  ELR A+WE++D E   W IPAE MKM+ PH+VP S Q + L+K+L P++   +L+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPAVTDLKKPMSENTLGYAMGRMGYKGTATPHGFRALASTVLNEEGFDPDIIEKQLAHAE  360
            F +  D +KP+S +++   +  +GYKG  T HGFR   ST+L+E+GF++  IE QLAH +
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RNKVRAAYHRAEYLEERRKMMQWWAEFLG  389
            +N +R++Y++A+YL+ RR MMQW A++++
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYID  387

197) XBJ1_1315 in NC_013892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 167/292 (58%), Positives = 238/292 (82%), Gaps = 0/292 (0%)

Query  1    MKLTARQVDTAKPKEKPYKLADGGGLYLLVNPNGARYWRLKYRIAGKEKLLALGVYPDIS  60
            M LT  +V TAKPKE+PYKLADGGG+YLL+N+NG++YWR+KYR+AGKEK+L++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSDARTKRNEARRTLSDGNDPIeekkaekaakaFAVSNSFESIAIEWHEHKRPNWSKGYA  120
            L+DAR KR+EAR+ L+ G DP E KK EK A   ++ N+FE++A EWH+ K   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EDILEYLKKDIFPYIGKRAVTEIKPAEMLAVLRKMEQRGVLDKLKKTRQACRQIFTYAVI  180
            ++I++ + KDIFPYIGKR+++EIKP E+L  LRKME+RG L+K++K RQ C ++F YA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAEFNPVTDLASALKAPKQKHFSHLLADQMNAFLVALAGYSGSEVTQSATRLLMLTGV  240
            TGRA++NP  DLASAL +PK+ HF+ L A+++  FL  LAGY+GS +T++AT+++MLTGV
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTIELRESEWTEFDFDKDIWQIPAERMKMRRPHIVPLSNQVKAILIKLHSIT  292
            RT ELR ++W ++DF+  +W+IPAE MKM+RPHIVP S+QV A++ +L++I+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPIS  292

198) APECO1_4218 in NC_008563


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

199) intS in NC_012759


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

200) EcDH1_1309 in NC_017625


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

201) intS in NC_017638


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

202) ECOK1_2630 in NC_017628


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

203) intS in NC_010473


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

204) intS in NC_000913


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

205) intS in NC_007779


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

206) E2348C_2486 in NC_011601


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/386 (49%), Positives = 266/386 (69%), Gaps = 7/386 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLD  393
            +RG YNHAQYLD RREMMQW AD +D
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYID  387

207) intS_2 in NC_022370


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

208) intS in NC_011742


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

209) UM146_05080 in NC_017632


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

210) intC in NC_007946


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 186/387 (49%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDE  394
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

211) ECs3231 in NC_002695


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDG  382
            +RG YNHAQYLD RREMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

212) intS in NC_013008


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1166),  Expect = 4e-86, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDG  382
            +RG YNHAQYLD RREMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

213) ECH74115_3582 in NC_011353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHAQYLD RREMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

214) intC in NC_002655


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHAQYLD RREMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

215) CDCO157_2996 in NC_017906


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 267/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKRREMMQWWADWLDG  394
            +RG YNHAQYLD RREMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

216) EcSMS35_4753 in NC_010498


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  311 bits (1165),  Expect = 5e-86, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV++AKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELSLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

217) CFSAN001992_11535 in NC_020307


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  310 bits (1161),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 173/412 (42%), Positives = 288/412 (70%), Gaps = 24/412 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG+GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSRRDEARKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLYRIDHYSGRPLTRFAVELMLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++++L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDANREIG  407
              W    +E Q++H +++S+R++Y H A+ L+ RR M+QW ADY+D+  E++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSELA  393

218) MICA_2451 in NC_016026


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  310 bits (1162),  Expect = 8e-86, Method: Compositional matrix adjust.
 Identities = 189/397 (48%), Positives = 281/397 (71%), Gaps = 7/397 (1%)

Query  1    MTLTNTTCKNAKPKEKPYKLADGGGLYLLVNPNGAKHWRLKYRFLGKEKLLAIGPYPLTS  60
            M+LT+   K AKPKE+PYKLADGGG+YLL+N+NG+K WR+KYRF GKEK+L+IG YP  +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarqarddaKKLIQSGADPVSHKREGKRNALRNAQNTFEAVALEWVENQKERWSPKYA  120
            LADAR+ R +A+K++ +G+DP   K+E K     + +NTFEAVA EW + + +RWS +Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVLRGLTVNIFPEIGQRPIAQITPPELLDALRKIEKRGALDIAGRTKQICGQVFRYGIQ  180
            + ++  +  +IFP IG+RPIA+I P ELL+ALRK+EKRGAL+   + +Q CG+VFRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGKCTRDASADLRGALKGRKAEHFASIDPKELPAFLKALGQNDARLYARTRRAIHLSMLC  240
            TG+   ++++DL +AL   K  HF+ + ++ELP FL  L+   + + ++T  A ++ ML 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKT--ATQIIMLT  238

Query  241  FTRPGEIRQAQWSEMDFEARQWVIPAERMKMRRDHIVPLSMQAIAILEAQREETGKLNTP  300
              R  E+R A+W ++DFEA+ W IPAE MKM+R HIVP S Q IA++  Q E  +K + P
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFK-QLEPISK-HHP  296

Query  301  YVFPSQIQPRKPMSDGTVNQAVKRLGYTDRMTAHGFRALARTAIREALGYDSEIIEKQLA  360
             VF ++ +PRKP+S  ++NQ +  LGY +R+T+HGFR    T ++E  G++S  IE QLA
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  361  HRTSNPLGEAYDRTQFLSQRKKMMQDW-ADHLDSIAH  396
            H   N++  +Y+++Q+L  R+ MMQ W AD +DS+++
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

219) SSON53_14055 in NC_016822


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  309 bits (1159),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 265/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIVPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G  P  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

220) intC in NC_007384


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  309 bits (1159),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 185/387 (48%), Positives = 265/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIVPVkakkassnnnsfs------aIYKEWYEHKKQVWSVGYATE  115
            +AR+K   ARK ++ G  P  AKK        S      A+ +EW + K + WS+ Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLADAMKGYRKKNFPFLPADQMPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR   W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +KPI  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKRREMMQWWADWLDE  382
            +RG YNHAQYLD RREMMQW AD +D 
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

221) D782_3965 in NC_020063


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  309 bits (1160),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPMDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFDGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGSKYWR++YRF GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARTRREEARKLVANGIDPGDKKKNDKVEQEDA--RTFEQLAIEWHATN-KKWSEEHS  117
            LADAR +R EARK++A G DPG+ KK++K+  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNITELKTRDLLAPIKVVELSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR I+E+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIGSYTGRPLTRLAVELTLLVFI  237
            +G  DYNPA ++ +A+A++++ H P L  +  P++L  +++YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALEILEQI  297
            R+ ELRFA+W +IDFE+ +W IPAE              KM+ PH+VP S Q + ++ Q+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQVEVCGHGFRTMACSSLIESGL-  356
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLT--GHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERLMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +E  ++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

222) ECO55CA74_14300 in NC_017656


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  308 bits (1156),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 184/387 (48%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  2    LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  61
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  115
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  116  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  175
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  176  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  235
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  236  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  295
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  296  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  355
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  356  VRGIYNHAQYLDKCREMMQWWADWLDG  382
            +RG YNHAQYLD  REMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

223) intS in NC_013941


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  308 bits (1155),  Expect = 3e-85, Method: Compositional matrix adjust.
 Identities = 184/387 (48%), Positives = 266/387 (69%), Gaps = 7/387 (1%)

Query  14   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ  73
            LT  ++ +AKPKE+PY+L DG G+YL +  +G K W+++Y++ GKEK+L++G YP +TL 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  74   EARDKAWTARKDISVGIDPVkakkassnnnsfs------aIYKEWYEHKRQVWSAAYATE  127
            +AR+K   ARK ++ G DP  AKK        S      A+ +EW + K + WS  Y  E
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG  187
            +   F+ DI+P IG   I +I PM+LLE +R+ E RGA+E+  K R+RCGEVFRYAIVTG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RAKYNPAPDLAEAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRT  247
            RA YNPAPDLA A+   +K +FPFL A+++P F   LA ++GSI++  AT+++  T++RT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  248  KELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAG  307
            +ELR  +W ++DFE ++  I A VMK ++ H+VP S+QV+ L+  L +I+K  + +VF G
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP-LVFIG  301

Query  308  RNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGS  367
            RND +K+I  +++  VI  +GY G  +GHGFRH  STI++E+   +  IE+QLAH +  S
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  368  VRGIYNHAQYLDKCREMMQWWADWLDG  394
            +RG YNHAQYLD  REMMQW AD +D+
Sbjct  362  IRGTYNHAQYLDGRREMMQWYADYIDS  388

224) ECP_4521 in NC_008253


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  307 bits (1152),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 281/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EW  T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGAHDLIFIGNHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

225) Rfer_1354 in NC_007908


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  307 bits (1150),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 181/394 (46%), Positives = 279/394 (71%), Gaps = 10/394 (2%)

Query  1    MSLTDTAIKKAKPGDKPVKLSDGKGLYLLVNPVGSKLWRWKYRFLGKEKVMSLGAYPDVS  60
            M+LTD  +K AKP ++P KL+DG G+YLL+N+ GSK WR KYRF GKEK++S+G YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARDGMGAARKLLASGTDPMAQRATDKITKQASAENSFQSVALLWWDHWHGAKSAR--  118
            LA+AR+  + ARK+LA+G DP   +  +KI+ Q S  N+F++VA     +WH +K+ R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVA----REWHQTKADRWS  116

Query  119  --HADDVMRRLKADVFPAIGARPVSEIQAHELVGMVQTISKRGALDIAKRALQTSGQVFR  176
                D+++  +  D+FP IG RP++EI++ EL+  ++ + KRGAL+  ++  Q  G+VFR
Sbjct  117  LRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFR  176

Query  177  YAVAHGLAQRNPASDIKPSDVLASRKAANYARISAKELPELLRHIEGYAGAAVTRLAMKL  236
            YA+  G A+ NPA+D+  +  LA+ K  +++ ++A+ELP++L ++ GY+G+ +T+ A ++
Sbjct  177  YAIVTGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQI  234

Query  237  MALTFVRTSELIGARWAEFDLEARRWDIPASRMKMKTPHIVPLSTQAVNVLQTLQLVSGR  296
            + LT VRT EL  A+W ++D+EA+ W+IPA  MKMK PHIVP S Q + +++ L+ +S +
Sbjct  235  IMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH  294

Query  297  GTLLFPGERDHEKSMSNNTILGALDRMGYKGRMTGHGFRGVASTLLHEMGFDHAHIELQL  356
              L+F G  D  K++S+++I   ++ +GYKGR+TGHGFR   ST+LHE GF+ A IE+QL
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHQERNEVSAAYNHATYLKQRTKMMQHWADYLDS  390
            AH ++N + ++YNHA YL  R  MMQ  ADY+DS
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDS  388

226) Dd586_0394 in NC_013592


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  307 bits (1150),  Expect = 7e-85, Method: Compositional matrix adjust.
 Identities = 180/407 (45%), Positives = 285/407 (71%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRIAKPSDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+ AKP ++ YKL+DG GM LL+++NGSKYWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGTDPGDKKKSDKVEQSEAL--TFKEVAIEWHSTN-KKWSQEHS  117
            LADAR +R EARK+LA G DPG+ KK +K+    +L  TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEQSGRLEVASRLQQRTTAIMRYAVQ  177
            + ++ ++E ++FP IGKR IAE+K  +LL +++ +E+ G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALDLKHTPELLRRIDNYTGRPLTRLAVELTLLIFI  237
            +G  DYNPA ++A+A+A++++ H P L  ++ P++L  +  YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFDTALWTIPPEREPIDGVKHSHRGSKMRTPHLVPLSRQALATLKQI  297
            R+ ELRFA+W +IDF++ LW IP+E              KM+ PH+VP S Q +A +KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QQFSCDHELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
            + +S +H L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

227) Bcep1808_0425 in NC_009256


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  306 bits (1147),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 176/387 (46%), Positives = 271/387 (71%), Gaps = 1/387 (0%)

Query  5    PLTDAKCRNARFDEAGGNKLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATS  64
            +LTD K + A+       KL DGGG+YL + ++GSK WR+KYRF GKE++L++G YP  +
Sbjct  2    ALTDVKVKTAK-PKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  65   LADARSRRDEAKRLLAEGKNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHA  124
            LADAR +R EA+++LA G +P+  +  EK +  ++ +NTFEAVA EW +++   WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  125  NRVKKQLDREVFPLIGQRPISSIGAPDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVA  184
            + +   +++++FP IG+RPI+ I + +LL  +R++E R A+E  RK  Q CG+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  185  TSRAERDPSPDLRGALKAVPVKHMARVGESELPELLRSIASYEGEPETRLALRFLALTFV  244
            T+RA+ +P+PDL +AL +    H + +  +ELP++L  +A+Y G   T+ A +++ LT V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  245  RTIELRQAEWTEIDLERREWRIPAEKMKMRRVHIVPLAEQAIALLSELRALTGHRRWLFP  304
            RT ELR A+W +ID+E + W IPAE MKM+R HIVP +EQ IAL+ +L +++ H+  +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  305  NSRRPLQQMSENTILYALYRMGYRSRMTGHGFRGLASTILNEKGFNSDWIERQLAHSEQD  364
                P + +S ++I   +  +GY++R+TGHGFR   STIL+E+GFNS WIE QLAH +++
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  365  GVRAAYNHAEYLSERHRMMQWWADYLD  391
            ++R++YNHA+YL  R+ MMQW ADY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYID  387

228) ECABU_c48360 in NC_017631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  306 bits (1148),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 281/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EW  T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

229) UM146_21610 in NC_017632


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  306 bits (1148),  Expect = 1e-84, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 281/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EW  T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

230) APECO78_02320 in NC_020163


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  306 bits (1145),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 172/406 (43%), Positives = 280/406 (69%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV++AKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARNLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHA  117
            LADAR +R EAR++LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

231) CE10_5017 in NC_017646


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  306 bits (1145),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 172/406 (43%), Positives = 280/406 (69%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV++AKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARNLLANGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHA  117
            LADAR +R EAR++LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

232) MYA_0364 in NC_017920


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  305 bits (1143),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 176/387 (46%), Positives = 271/387 (71%), Gaps = 1/387 (0%)

Query  5    PLTDAKCRNARFDEAGGNKLFDGGGLYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATS  64
            +LTD K + A+       KL DGGG+YL + ++GSK WR+KYRF GKE++L++G YP  +
Sbjct  2    ALTDVKVKTAK-PKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  65   LADARSRRDEAKRLLAEGKNPAFERDVEKQTRAIAAQNTFEAVALEWYEAQQATWSGSHA  124
            LADAR +R EA+++LA G +P+  +  EK +  ++ +NTFEAVA EW +++   WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  125  NRVKKQLDREVFPLIGQRPISSIGAPDLLAVIRRIEGREAFETARKTLQTCGQVFRYAVA  184
            + +   +++++FP IG+RPI+ I + +LL  +R++E R A+E  RK  Q CG+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  185  TSRAERDPSPDLRGALKAVPVKHMARVGESELPELLRSIAAYEGEPETRLALRFLALTFV  244
            T+RA+ +P+PDL +AL +    H + +  +ELP++L  +A+Y G   T+ A +++ LT V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  245  RTIELRQAEWTEIDLERREWRIPAEKMKMRRVHIVPLAEQTIALLAELRALTGHRRWLFP  304
            RT ELR A+W +ID+E + W IPAE MKM+R HIVP +EQ IAL+ +L +++ H+  +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  305  NSRRPLQQMSENTILYALYRMGYRSRMTGHGFRGLASTILNEKGFNSDWIERQLAHSEQD  364
                P + +S ++I   +  +GY++R+TGHGFR   STIL+E+GFNS WIE QLAH +++
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  365  GVRAAYNHAEYLSERHRMMQWWADYLD  391
            ++R++YNHA+YL  R+ MMQW ADY+D
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYID  387

233) intB in NC_007946


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  305 bits (1144),  Expect = 2e-84, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 280/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDLKVRTAKPADKQYKLTDGGGMHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT  60
            MALTD+KV+TAKP ++ YKL+DGGGM LL+++NGSKYWR++YR+ GK+KML++GVYP++T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARVRRDEARKLLANGVAPGDKKKNDKVEQSKA--RTFKEVAIEWYGTN-KKWSEDHA  117
            LADAR +R EARK+LA G  PG+ KK++K+    +   TF  VA EW  T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
            + ++ ++E ++F+ +G R IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++LT + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSRQALAILKQI  297
            R+ ELRFA+W +IDFEA +W IP+E              KM+  H+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +   H L+FIG +D++KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

234) PSPTO_5344 in NC_004578


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 179/396 (46%), Positives = 272/396 (69%), Gaps = 10/396 (2%)

Query  1    MPLSDTTIRTAKPKDKLYRLTDANGLCLEIAPSGSKLWRYRYRFNGKAKMLALGAYPAVT  60
            M+L+D  ++TAKPK++ Y+L+D+ G+ L I ++GSK WR +YRF GK KML++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LLKARQLRDSARQLLVEGNDPGEHKKTAQQAQKVE-GLTFETLAREWFAYNSPRWAESTT  119
            L  AR+ R  AR++L  G DPGE KK  + A ++    TFE++AREW   ++ RW  S  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRW--SLR  118

Query  120  YKAKLY--MENDLIPGIGARPVKALTRPDLVDLVRKVEARGTLNAAGKIRQWLHQIFRYG  177
            Y+  +    E+D++P IG RP+  +   +L++ +RK+E RG+L+   K+RQ+  ++FRY+
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  LAKGVVESNPATDL-DVVAAPQKAPRHHPHVPFSELPELLEICDGSKINTLTRCAIHLLV  236
            +  G  + NPA DL   +A+P+K   H P +  +ELP++L    G   + +T+ A ++++
Sbjct  179  IVTGRADYNPAPDLASALATPKKV--HFPFLTANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  237  LTAVRPGELRNAPWSEFDLDAATWAIPKERMKARRPHVVPLPTQAVDILRQLQPITGRYP  296
            LT+VR  ELR A W ++D++A  W IP E MK +RPH+VP + Q + +++QL+PI+ + P
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  297  LVFAGQHNPSRPMSENTINKALRLLGYENRQTGHGFRHLLSTELNGRGYNKDWIERQLAH  356
            LVF G+++P +P+S ++IN+ + LLGY  R TGHGFRH +ST L+ +G+N  WIE QLAH
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  357  GDADGIRDTYNHASYLEQRRGMMQAW-ADSIDALSA  391
             D ++IR+TYNHA YL+ RR MMQ W AD ID+LS 
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

235) Ser39006_0951 in NC_022268


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 282/407 (70%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMFLLVHPNGSKYWRFRFRFGGKQHLMAFGVYPEVS  60
            MALTD KV++AKP E+ Y L DG+GM+LL+++NGSKYWR ++RF+GK+ ++++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREAARKLVAAGIDPREQKRAVQEEQAKAV-FTFEFVAREWHATN-KKWSEEHS  118
            LADAR+KR  ARK++AAG DP E K+  +     ++  TFE VAREWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  RRVLKSLEDNLFSAIGKRNVAELKTRDLLAPIKTVEQSGRLEVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F+ IGKR +AE+K  +LL +++ +E+ G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTRLSVELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  +  P++L  + +YTG  +T+ + ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIEGVKHSHRGSKMRTPHLVPLSRQALVILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q + ++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  QQVSGDHELIFIGDHNPRKPMSENTVNNALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
            + +S +H L+FIG ++PRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

236) ECA2879 in NC_004547


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 177/407 (44%), Positives = 269/407 (67%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRSAKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALTD+KV++AKP E+PYKL+DG GM+LL+++NGSKYWR++YR  GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQKRDEARKLISAGVDPNEHKKAVKTQQQDD-EQTFEAVARAWH-TDNKKWSESHA  118
            L++AR+KR EARK+++AG DP E KK  K   Q    +TFEAVAR WH T   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERILKSLSDNIFPAIGGTHVANLKTRDLLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
            + I+ ++  +IFP IG   +A++K  +LL +++ +E+ G LE  ++++QR   +  YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHRPALELDRLPELLGRIDGYKGREFTKWVINLSLLIFI  238
             G  DYNPA D+A+A+   K  H P L  + LP++L  + GY G  +TK   ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWPEIDFERSLWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILKKI  298
            R+ ELRFA+W +IDFE  LW IP+E              KM  PH+VP S Q + ++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S H  LVFIG + +RKP+S  ++N+ ++ +GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADFLDA  402
              W    +E Q++H ++N++R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

237) KO11_23100 in NC_017660


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEV-ITFEVVAREWHASN-QKWSASHS  118
            L DAR +R EARK+LA G DP+E KK  K+  +  +  TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++Q+   ++R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELRFA+W ++DF++ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

238) EKO11_4021 in NC_016902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEV-ITFEVVAREWHASN-QKWSASHS  118
            L DAR +R EARK+LA G DP+E KK  K+  +  +  TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++Q+   ++R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELRFA+W ++DF++ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

239) LY180_22530 in NC_022364


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEV-ITFEVVAREWHASN-QKWSASHS  118
            L DAR +R EARK+LA G DP+E KK  K+  +  +  TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++Q+   ++R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELRFA+W ++DF++ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

240) ECW_m4652 in NC_017635


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEV-ITFEVVAREWHASN-QKWSASHS  118
            L DAR +R EARK+LA G DP+E KK  K+  +  +  TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++Q+   ++R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELRFA+W ++DF++ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

241) WFL_22655 in NC_017664


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  304 bits (1141),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 168/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEV-ITFEVVAREWHASN-QKWSASHS  118
            L DAR +R EARK+LA G DP+E KK  K+  +  +  TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQHTTAIIRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++Q+   ++R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALTILEKI  298
            R+ ELRFA+W ++DF++ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ R  M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

242) ECO26_4069 in NC_013361


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  303 bits (1134),  Expect = 1e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

243) Q7A_2891 in NC_017857


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  302 bits (1132),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 175/391 (45%), Positives = 266/391 (69%), Gaps = 4/391 (1%)

Query  2    LTDVKIKALKPKDKLYAVSDEKGLYIEVSTTGGKWWRFKFRFDGKQKRLSVGTYPDVGLK  61
            LTDVK+K+ KPK++ Y ++D  G+Y+ +++ G+K WR K+RF GK+K LS+G YPDV L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   QAREQRDELRKQIANGVDPSDIRKAEKQLNAGQL--SFEFVAREWHQKFRHRWSEKYALN  119
            +ARE+R E RK +A G DP++ +K EK      L  +FE VAREWHQ   +RWS +Y  +
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  120  TISRLEREVFPFIGSKNINDIKAPELLAVLRRMESRGILETAHRVHQKCGQIFRYAVATG  179
             I  +E+++FP+IG + I +IK+ ELL  LR+ME RG LE  ++V+Q+CG++FRYA+ TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  180  RAERDPSTDLKGALPPVKVKHHASIIEPKQIGGLLRAINGYSGSFVTLCALRLAPLVFVR  239
            RA+ +P+ DL +AL+  K K H +++ ++++  +L  + GY+GS++T  A ++  L  VR
Sbjct  183  RADYNPAPDLASALATPK-KVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  240  PGELRHAEWTEFDLEKAEWRIPAEKMKMASVHIVPLSKQAIAVIETLKPLTGSGKYLFPS  299
              ELR A+W ++D+E   W IPAE MKM   HIVP S Q IA++  L P++     +F +
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  300  IRTITRPMSENTVNGALRRLGYTGDEMVGHGFRSMASTILNEQGWNRDAIERQLAHSERD  359
                 +P+S +++N  +  LGY G  + GHGFR   STIL+EQG N   IE QLAH +++
Sbjct  302  RNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  GVRAAYNYAEYLSERKRMMQSWANYLDGLTA  390
            ++R++YN A+YL  R+ MMQ  A+Y+D+L+ 
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

244) ECUMN_3322 in NC_011751


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  302 bits (1131),  Expect = 2e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAELEPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE+             KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEV------------MKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

245) H650_18115 in NC_021500


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 175/412 (43%), Positives = 287/412 (70%), Gaps = 24/412 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG+GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPTENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAIIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFAHWSEVDFETAMWTIPGEREPLEGVKHSQRGSKMKTPHLVPLSQQALAILEKI  298
            R+ ELRFAHW ++DFE+ +W IP+E              KMK PH+VP S+Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRDLIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDANREIG  407
              W    +E Q++H +++S+R++Y H A+ L+ RR M+QW ADY+D+  E++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSELA  393

246) ECABU_c32560 in NC_017631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

247) int in NC_008563


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

248) i14_3273 in NC_017652


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

249) i02_3273 in NC_017651


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

250) EcE24377A_3314 in NC_009801


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLIHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LLI++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

251) int in NC_017644


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

252) ECO103_3550 in NC_013353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 279/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

253) ECO103_4929 in NC_013353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 279/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

254) ECO111_5079 in NC_013364


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 279/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

255) E2348C_3220 in NC_011601


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 279/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

256) ECO26_5300 in NC_013361


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1129),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 279/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

257) CE10_3417 in NC_017646


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

258) ECS88_4720 in NC_011742


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1128),  Expect = 4e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEVKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTKEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

259) EC042_4610 in NC_017626


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

260) int in NC_011748


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

261) O3M_04655 in NC_018650


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

262) O3O_21040 in NC_018661


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

263) O3K_04610 in NC_018658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

264) UMNK88_3667 in NC_017641


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1127),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

265) EC042_3174 in NC_017626


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1126),  Expect = 6e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASNKQ-WAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALNLSRLPELLSRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTRDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

266) EcolC_0747 in NC_010468


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  301 bits (1126),  Expect = 6e-83, Method: Compositional matrix adjust.
 Identities = 163/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ +   +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDGYKGLPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSYRGSKMRTPHLVPLSQQAVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

267) SARI_03312 in NC_010067


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  300 bits (1125),  Expect = 7e-83, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 275/407 (68%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVT  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LANARKLREEARAVLSAGDDPGVKKQQEKQAKKSG--NTFEEVARRWLAGNI-RWTEHHA  117
            LA+AR  R EAR +L+AG+DPG  K++EK A + +  NTFE VAR W   +  RW+ +  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKILRSLELHVFPLIGNIPVADLKTADLLIPLRVAEKKGNLETAARSQQRTTAIMRYAVQ  177
              I+ ++E ++FP IG+ P+A++K  +LL +LR  EK+G LE   + +QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  ESLIASNPANDLTGAIAPPPKNHYPALPLEQIPQLLERLEGYSGRLLTRLAVQLNLLIFI  237
             +    NPA DL++A+A P K H+P L  +++P++L  L GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWTEIDLDGAMWTIPTQRESIPGVRYSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID+++ +W IP++              KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTMACSALIESG--  355
              +S +  L+F G +DPRKP+S ++IN+ + ++GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N++R++Y H A+ LD R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

268) KO11_22995 in NC_017660


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

269) EKO11_4043 in NC_016902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

270) LY180_22420 in NC_022364


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

271) WFL_22550 in NC_017664


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  299 bits (1120),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKYSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

272) AvCA6_40500 in NC_021150


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 175/393 (45%), Positives = 266/393 (68%), Gaps = 4/393 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D  ++TAKP+E+ Y+LAD+ G+ L + + GSK WR +YRF G+ KML++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQSD-GLTFETLAREWHAYRAPRWAKSTA  119
            L  AR+ R  AR++LA G DP+  +K E+ A Q     TFE++AREWH  +A RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
            D     +E D++P +GKRP+  I   EL+E L+ +E RGA +  +K RQ+ +++FR+++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G  D NPA DL    A +   +     +  ELP++L  + G + +++T+ A ++++LTG
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            VR  ELR A W ++D+ A +W IP E MK +RPHIVP + Q +A++++L+ I+    LVF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
             GRN++ +P+S +++N+ +   GY+GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCA  391
            + +R+TYNHA YL+ RR+MMQ W AD ID+L  
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

273) AvCA_40500 in NC_021149


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 175/393 (45%), Positives = 266/393 (68%), Gaps = 4/393 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D  ++TAKP+E+ Y+LAD+ G+ L + + GSK WR +YRF G+ KML++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQSD-GLTFETLAREWHAYRAPRWAKSTA  119
            L  AR+ R  AR++LA G DP+  +K E+ A Q     TFE++AREWH  +A RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
            D     +E D++P +GKRP+  I   EL+E L+ +E RGA +  +K RQ+ +++FR+++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G  D NPA DL    A +   +     +  ELP++L  + G + +++T+ A ++++LTG
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            VR  ELR A W ++D+ A +W IP E MK +RPHIVP + Q +A++++L+ I+    LVF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
             GRN++ +P+S +++N+ +   GY+GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCA  391
            + +R+TYNHA YL+ RR+MMQ W AD ID+L  
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

274) Avin_40500 in NC_012560


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 175/393 (45%), Positives = 266/393 (68%), Gaps = 4/393 (1%)

Query  1    MPLSDSAIRTAKPREKLYRLADANGLCLEVTPTGSKLWRYRYRFNGNAKMLALGVYPAVT  60
            M+L+D  ++TAKP+E+ Y+LAD+ G+ L + + GSK WR +YRF G+ KML++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LQKARQLRDAARQLLAEGKDPSAERKAEQEAQQSD-GLTFETLAREWHAYRAPRWAKSTA  119
            L  AR+ R  AR++LA G DP+  +K E+ A Q     TFE++AREWH  +A RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  120  DKTAAYLESDLLPVLGKRPVKAITRPELVELLHGIEDRGAHNVAKKCRQWLSQIFRFGLA  179
            D     +E D++P +GKRP+  I   EL+E L+ +E RGA +  +K RQ+ +++FR+++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  KGSVDANPATDLDvvaahapatrhhphvtFAELPELLGKIEGASINVLTRHAIRLLVLTG  239
             G  D NPA DL    A +   +     +  ELP++L  + G + +++T+ A ++++LTG
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  VRPGELRAAPWSEFDLKAAVWTIPKERMKARRPHIVPLPRQAMAILRELQEITGAYELVF  299
            VR  ELR A W ++D+ A +W IP E MK +RPHIVP + Q +A++++L+ I+    LVF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  300  AGRNNSARPMSENTVNKALADAGYRGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHGDQ  359
             GRN++ +P+S +++N+ +   GY+GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DEMRDTYNHATYLEQRRDMMQAW-ADSIDALCA  391
            + +R+TYNHA YL+ RR+MMQ W AD ID+L  
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

275) intB in NC_016514


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  298 bits (1115),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 177/407 (44%), Positives = 284/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGSKYWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrddarKLLANSIDPGDKKKNDKVEQEEA--RTFEQLAIEWHATN-KKWTEEHS  117
            LADAR +R +ARK+LA + DPG+ KK++K+  + +   TFE +A EWH T+  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMAGAVASSNRQHRPALELRRTPELLQRIDSYTGRPLTRLAIELTLLVFI  237
            +G  DYNPA ++A+A+A++++ H P L     P++L  + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGIKHSQRGSKMHTPHLVPLSRQALAILKQV  297
            R+ ELRFA+W +IDFE+ +W IPAE              KM  PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  HKLSGDRDFVFIGDHDHRKPMSENTVNKALRVMGYDTKIEVCGHGFRTMACSSLIESGL-  356
            + +S ++ +VFIG +D RKP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

276) CFSAN002050_22445 in NC_021818


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  298 bits (1116),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 272/407 (67%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWQLKYRFGGKEKKLAFGAYPTVT  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LANARKLREEARAVLSTGDDPGVKKQQEKQAKKSG--NTFEEVARKWLAGNI-RWTEAHA  117
            LA+AR  R EAR +L++G+DPG  K++EK A + +  NTFE VAR W   +  RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKALRSLELHVFPLIGKIPVTDLKTADLLIPLRVAERKGNLETAARIQQRTTAIMRYAVQ  177
               + ++E ++FP IGK P++++K  +LL +LR  E++G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  ESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLERLEGYSGRLLTRLAVQLNLLIFI  237
             +    NPA DL++A+A P K H+P L  + +P++L  L GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWAEIDLDGAMWTIPAGREPIPGVRYSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID+++ +W IPA               KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKVDVCGHGFRTMACSALIESG--  355
              +S +  L+F G +DPRKP+S ++IN+ + ++GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N++R++Y H A+ LD R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

277) Ent638_0463 in NC_009436


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1114),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 174/407 (43%), Positives = 284/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDSNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+D+ GM LL+++NGS+YWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQEEA--RTFEQLAVEWHATN-KKWSEEHS  117
            LADAR +R EARK+LA + DPG+ KK++K+  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDSYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSHRGSKMRTPHLVPLSKQALEILRQI  297
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q + +++Q+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KHFCGEYELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +  +  L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

278) EC042_4741 in NC_017626


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1113),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 171/406 (43%), Positives = 280/406 (69%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRSAKPQEKEYTLADGDGMFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETS  60
            MALTD+KV++AKP+E+ Y LADG+GM+LLI++NGSKYWR ++RF+GK+ ++++GVYP+ +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREEARKLVAAGIDPREHKRAVKEE-QTKEAITFESVAREWHAVN-KKWTEEHS  118
            LADAR+KR EARK++AAG DP E K+  K   Q     TFE+VAREWH  +  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  RRVLKSLEDNLFPAIGKRSIDSFSTRDLLVPIKVVEATGRLEVASRLQQRTNAIMRCAVQ  178
              ++ ++E ++FP IGKR+I  +   +LL +++ +E  G LE   +++QR   + R A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRVHRPALELKRLPELLQRIDSYSGRPLTRLAVELTLLIFI  238
            +G  DYNPA ++A+A+A++++VH P L  + LP++L  + +Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWPEIDFERAMWTIPAEREAIEGVKHSERGSKMRTPHLVPLSRQALAILKQV  298
            R+ ELRFA+W +IDFE  +W IPAE              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  HKLSGERDFVFVGDHNPCKPMSENTVNKALRVMGYDTKIEVCGHGFRTMACSSLIESGL-  357
            + +S ++ +VF+G ++P KP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGFN  346

Query  358  --WSRNAVERQMSHMERNSVRAAYIHKAQHLDERKMMLQWWADFLD  401
              W    +E Q++H+++NS+R++Y H AQ LD R+ M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

279) GBP346_A1152 in NC_012695


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1112),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 178/393 (46%), Positives = 272/393 (70%), Gaps = 6/393 (1%)

Query  21   MPLTDVQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  80
            M+LTDV+V+ AK+   PYKL+DG GM+LL+++NG+KYWR+ YRF GK+K L++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  81   LATARKKRDEAREQLAAGIDPGEAKKEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYA  140
            LA AR KR EAR  LAAG DPGEAKKE + + +++  N+FEAVAREW +++   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  141  EKVLNSLEVDVFPKIGPRPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIV  200
            + +++++E D+FP IG RPIAEI + ++L  +R +E RG  E  +++ QR   VF+Y+IV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  201  TGRCSRNPAADIDAQTALKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  260
            TGR   NPA+D+ +  A    P   H + + A E+P+++ D+ +Y G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  261  TCVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  320
            T VRT E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++ QL +++ +H +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  321  VFYS-VQGRSHISNNTMLYALYRIGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHA  379
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E GF    +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  380  ERNQVTAAYVHAEYLPERRRMMQAW-GDHLDRL  411
            ++N + ++Y HA+YL  RR MMQ W +D +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

280) Entcl_3878 in NC_014618


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1112),  Expect = 7e-82, Method: Compositional matrix adjust.
 Identities = 174/406 (43%), Positives = 281/406 (70%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRSAKPQEKEYTLVDGDGMFLLIHPNGSKYWRFRFRFGGKQHLMAFGVYPETS  60
            MALTD+KV++AKP+E+ Y L DG+GM+LLI++NGSKYWR ++RF+GK+ ++++GVYP+ +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREEARKLVAAGIDPREHKRAVK-EQQAKENITFESVAREWHAAN-KKWSEEHS  118
            LADAR+KR EARK++AAG DP E K+  K   Q   + TFE+VAREWH ++  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  RRVLKSLEDNLFPAIGKRSIDSFSTRDLLVPIKVVEATGRLEVASRLQQRTNAIMRYAVQ  178
              ++ ++E ++FP IGKR+I  +   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRVHRPALELKRLPELLHRIDSYTGRPLTRLAVELTLLIFI  238
            +G  DYNPA ++A+A+A++++VH P L  + LP++L  + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFERAMWTIPAEREAIEDVKHSQRGSKMRTPHLVPLSRQALAILKQV  298
            R+ ELRFA+W +IDFE  +W IPAE              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  HKLSGERDFVFIGDHNPLKPMSENTVNKALRVMGYDTKVDVCGHGFRAMACSSLIESGL-  357
            + +S ++ +VFIG ++P KP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHMERNSVRAAYIHKAEHLDERRLMLQWWADLLD  401
              W    +E Q++H+++NS+R++Y H A+ LD RR M+QW AD +D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

281) BURPS1710b_1290 in NC_007434


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1111),  Expect = 9e-82, Method: Compositional matrix adjust.
 Identities = 177/393 (46%), Positives = 271/393 (69%), Gaps = 6/393 (1%)

Query  1    MPLTDVQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  60
            M+LTDV+V+ AK+   PYKL+DG GM+LL+++NG+KYWR+ YRF GK+K L++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKKRDEAREQLAAGIDPGEAKKEARRTAEIAAANSFEAVAREWFDSQRPGWSDGYA  120
            LA AR KR EAR  LAAG DPGEAKKE + + +++  N+FEAVAREW +++   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVLNSLEVDVFPKIGPRPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIV  180
            + +++++E D+FP IG RPIAEI + ++L  +R +E RG  E  +++ QR   VF+Y+IV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR   NPA+D+ +       P   H + + A E+P+++ D+ +Y G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T VRT E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++ QL +++ +H +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYALYRIGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E GF    +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERRRMMQAW-GDHLDRL  391
            ++N + ++Y HA+YL  RR MMQ W +D +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

282) Gbem_3253 in NC_011146


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  297 bits (1111),  Expect = 9e-82, Method: Compositional matrix adjust.
 Identities = 178/392 (46%), Positives = 276/392 (71%), Gaps = 4/392 (1%)

Query  1    MALTDVKVRNAKPGEKQAKLSDGDGMYLLVTPQGGKCWRLKYRIAGKEKVLALGTYPEIS  60
            MALTDVKV+ AKP E+  KL+DG+GMYLL+ ++G+K WR+KYR+AGKEK+L++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARERKDAARKLIANGHDPGevkkaqkaaktaeaeNTFQAVTQEWHGRFKSQWSEKHA  120
            L++ARE++  ARK++A G DPGE KK +K A      NTF+AV++EWH     +WS +  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EQILRRLELDVFPWLGTRPVGEIKAPELLAVLRRIEMR-TLETAHRVRIACSQVFRYAVA  179
            ++I+  +E D+FP +G RP++EIK+ ELL  LR++E R +LE  ++VR  C++VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  TGRAERDPVADLKGALPPVKNNHFAALTDPKAVAPLLRAIDGFEGSFVVKCALKLAALTF  239
            TGRA+ +P +DL +AL+  K+ HF+ LT ++ ++ +L  + G+ GS++ K A ++  LT 
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  VRPGELRHAEWSEIDLEAARWEIPAERMKMKVAHLVPLSTQAVDILKELHPLTGSGTYVF  299
            VR  ELR A+W +ID+EA  WEIPAE MKMK +H+VP S Q + ++K+L+P++     VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  300  PCHRSPLRCMSENAVNAALRRMGFEKSEITGHGFRAMARTILDEVLHVRPDFIEHQLAHA  359
              +  P + +S +++N  +  +G+ K+ +TGHGFR    TIL+E     +  IE QLAH 
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  360  VKDPLGRAYNRTSHLAERQKMMQTWADFLDGL  391
             K+++  +YN++  L  R+ MMQ  AD++D+L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

283) int in NC_011741


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 176/410 (43%), Positives = 277/410 (68%), Gaps = 24/410 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LLIN+NGSKYWR++YRF GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQSEAL--TFEAVARDWHTACKRKWSDSHS  118
            L++AR KR EA+K+++ G DP+E KK +KI    +L  TFEAVAR+WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSMEDGLFTAIGRRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
            + ++ + E ++F  IG+R I+E++  +LL +++ +E  G LE   +++QR   V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G  DYNPA ++A+A+A +K+VH P L  + ++++L  + ++ G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFDNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKDI  298
            R+ ELRFA+W +IDF+  +W IP+E              KMK PH+VP S Q + L+K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REISGECELVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
              IS +  LVFIG +D RKP+S +++N+ +  +GY     + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLNALKD  405
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+++L +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSE  391

284) PAGR_g3659 in NC_017554


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  296 bits (1108),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 282/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG+GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAAKVEQEQE-AITFEVVAREWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAREWH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFDAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMKTPHLVPLSRQAVAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KMK PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGVRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHG R    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

285) EAE_09085 in NC_015663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  296 bits (1109),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 166/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPDEKPYKLADSGNMFLLVHPNGSRYWRLRYRFLGKEKTLALGVYPEVS  60
            MALTD K+++AKP E+PYKLAD+G M+LL+++NGS+YWR++YRF GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEAREKRDTARKLIAEGTDPCEHKRIKKSVPETA--QTFEGIARQWHKSN-KKWSDSHS  117
            L++AREKR  ARK++A G DP E K+  K   + +  +TFE++AR+WH+++  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  EKILKSLETHVFPFIGSRDITTLRTPDLLVPVkaaeakeiyeiaaRLQQRITAIMRYAAQ  177
            + I+ ++E ++FP+IG R I+ ++  +LL +++  E +   E   +++QR   + RYA  
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIITYNPAVDMAGALTTVKRQHRPALALNRISELLERLDAYRGQPLTRLATKLTLLIFI  237
            +G   YNPA D+A+AL+T K+ H P L+ N ++++L  L +Y G  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFKKAMWTIPPERKPIEGVKYSHRGSKMRTEHLVPLSTQALDILQQI  297
            R+ ELRFA+W +IDF   +W IP+E              KM+  H+VP S Q + +++Q+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  HTISGEYELIFTGDHNPWKPMSENTVNNALRLMGYDTKIDVCGHGFRAMACSSLIESGL-  356
            + IS +  L+F G ++P+KP+S +++N+ + L+GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A++LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

286) ECENHK_02620 in NC_018405


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  296 bits (1107),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 283/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFASIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGERELLEGVKHSQRGSKMRTPHLIPLSRQALTILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

287) H650_18245 in NC_021500


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  296 bits (1107),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 167/406 (42%), Positives = 277/406 (69%), Gaps = 24/406 (5%)

Query  1    MALTDTKVRSAKPEVKEYSLVDGDGMFLLIHPNGSIYWRFRFRFGGKQHLMAFGVYPETS  60
            MALTD KV++AKP  + Y L DG+GM+LLI++NGS YWR ++RF+GK+ ++++GVYP+ +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQKREEARKLVAAGVDPREHKRAVKEEQAKEV-ITFESVARDWHASN-QKWSESHS  118
            LADAR+KR EARK++AAG DP E K+  K      +  TFE+VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  GRVLKSLEDNLFDAIGKRNIAELKTRDLLIPIKAVEMSGRLEVAARLQQRTTAIMRFAVQ  178
            + ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDTYTGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFEIAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSSQALTILEKI  298
            R+ ELRFA+W ++DFE  +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHLGERRLMVQWWADYLD  401
              W    +E Q++H ++NS+R++Y H A+ L+ RR M+QW ADY+D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

288) EAM_3037 in NC_013971


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  295 bits (1106),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGS+YWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQEEA--RTFEELAVEWHATN-KKWSEEHS  117
            LADAR +R EARK+LA + DPG+ KK++K+  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTCLAVELTLLVFI  237
            +G  DYNPA ++ +A+A++++ H P L  +  P++L  + +YTG  +T  A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWMIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALAILEQI  297
            R+ ELRFA+W +IDFE+ +W IPAE              KM+ PH+VP S Q +A++ Q+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQIEVCGHGFRTMACSSLIESGL-  356
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVKRQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +  Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

289) intB in NC_013961


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  295 bits (1106),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 282/407 (70%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGS+YWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANSIDPGDKKKNDKVEQEEA--RTFEELAVEWHATN-KKWSEEHS  117
            LADAR +R EARK+LA + DPG+ KK++K+  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIDSYTGRPLTCLAVELTLLVFI  237
            +G  DYNPA ++ +A+A++++ H P L  +  P++L  + +YTG  +T  A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWMIPAEREAIEGVKHSQRGSKMRTPHLVPLSRQALAILEQI  297
            R+ ELRFA+W +IDFE+ +W IPAE              KM+ PH+VP S Q +A++ Q+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KTFSGDHELIFIGDHNPRKPMSENTVNKSLRVMGYDTQIEVCGHGFRTMACSSLIESGL-  356
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVKRQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  401
              W    +  Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

290) ECO55CA74_24440 in NC_017656


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  295 bits (1105),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 175/408 (43%), Positives = 279/408 (69%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LLIN+NGSKYWR++YRF GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQSEAL--TFESVARDWHKACKRKWSDSHS  118
            L++AR KR EA+K+++ G DP+E KK +KI    +L  TFE+VAR+WH++   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSMEDGLFTAIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
            + ++ + E ++F  IGKR I+E++  +LL +++ +E  G LE   +++QR   V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLARIDSFKGRkltklavkltllIFI  238
             G  DYNPA ++A+A+A +K+VH P L  + ++++L+ + ++ G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFENAMWTIPGEREPLPGVKHSHRGSKMRTPHLVPLSCQALAVLTKI  298
            R+ ELRFA+W +IDFE  +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KEISGDHELVFIGDHNFRKPMSENTVNKALRAMGYDTTVEVCGHGFRAMACSALIESGL-  357
              IS +H LVFIG ++ RKP+S +++N+ +  +GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A+ LD R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

291) EBL_c34780 in NC_017910


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  295 bits (1106),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 282/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG+GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSTSHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFASVGKRNIKDIGTRDLLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ +GKR I +I   +LL +++ +EK G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEIAGAIATAKRKHRAALDLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFI  238
             G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKKEVCGHGFRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

292) CFSAN002050_05850 in NC_021818


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  295 bits (1106),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 276/407 (68%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEDNANPLSDGDGLFLLVHANGSKYWRFRFRFGGKQHVMAFGVYPEVS  60
            MALTD KV++AKP + +  L+DG+G++LL++ANGSKYWR ++RF+GK+ ++++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPRAHKRAVKEEQAKEI-ITFEKVARDWLATN-QKWSEDHA  118
            LADAR KR EARK++AAG DP   K+  K      +  TFE VAR+W  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVKKSLEDNVFPAIGTRNIAELSTRDLLLPIKAVETSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E ++FP IG R IAE+   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASGNRKHRPALALKRIPELLQKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A+ ++ H P L+ + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPDVKHSHRGSKMHTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM  PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGKHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +   H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEFIDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+++D R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

293) ECO103_5061 in NC_013353


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  294 bits (1101),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 176/407 (44%), Positives = 285/407 (71%), Gaps = 25/407 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPDVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGSKYWR++YRF+GK+KML++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrddarKLLANGIDPGDKKKNDKIEQEEA--RTFEQLAIEWHATN-KKWSEEHS  117
            LADAR +R +ARK+LA G DPG+ KK++KI  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIADLKTRDLLAPIKAVELSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IA++K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMVGAVASNNRQHRPALQLKLIPELLRRIDSYTGRPLTRLAVELTLLVFI  237
            +G  DYNPA ++ +A+A+ ++ H P L  + +P++L  + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWTIPAEREAIEGVKHSQRGSKMRTPHLVPLSHQALAILKDV  297
            R+ ELRFA+W +IDFE+ +W IPAE              KM+ PH+VP S+Q +A++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  YKLSGDRDFVFIGDHDHRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +S ++ +VFIG +D RKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHMERSSVRAAYIHKAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H++++S+R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

294) A225_0566 in NC_018106


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  294 bits (1102),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 275/407 (68%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPNGSKYWRFRFRFGGKQHLMAFGVYPEIS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++NGSKYWR ++RF+GK+ ++++GVYP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LANARKKREEARKLVAAGIDPREHKRALKEEQAKEI-ITFEKVAREWLATN-QKWSEDHA  118
            LA+AR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTCNIAELGTRDLLAPIKAVEVSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG   IAE+   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASGNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWANFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW A+++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

295) A11S_2095 in NC_020812


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 182/396 (46%), Positives = 266/396 (68%), Gaps = 7/396 (1%)

Query  1    MKLSDKTCKAAKPRESSYKLFDGGGLFLEITPNGSKLWRLKYRFLGKEKRISLGAYPIVS  60
            M L+D   K+AKP+E +YKL DGGG++L I +NGSK WR+KYRF GKEK +S+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARDGRERAKKQLVQGVDPSNAKQAHRREAIRNAENTFKAVALEWHEKQLARWTSTHA  120
            LADAR+ R  A+K L  G DP++AK+ ++     +  NTF AVA EWH+ +  RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  QNVTRRMEVDIFPYIGNRPIADIDAPELLSVLRRIEARGALDVTARVKQISGQVFRYGIA  180
            +++    E DIFPYIG+RPIA+I + ELL  LR++E RGAL+   +V+Q  G+VFRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCQRDPSADLKGALKVNKTTSYACLDIKEMPEFLEKLERNEARLFATTRRAIKILMLT  240
            TGR + +P++DL +AL   K   ++ L  +E+P+FL  L    + +   T+ A +I+MLT
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSI--ITKTATQIIMLT  238

Query  241  FVRTGELINATWDEFDLENATWEIPGWRMKMRNPHIVPLSRQVIEILKEQKKETEHLTTP  300
             VRT EL  A W+++D+E   WEIP+  MKM+ PHIVP S QVI ++K+    + H   P
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH--HP  296

Query  301  WVFPSQVRPKDPMSNNTILFAIGRMGYKKRMTGHGFRALAMSNIKEKLGYRHEVVDRQLA  360
             VF ++  P+ P+S+++I   I  +GYK R+TGHGFR  +MS I +  G+    ++ QLA
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRH-TMSTILHEQGFNSAWIEMQLA  355

Query  361  HAHRNKIDRAYDRAQFLDERRKMMGEW-ADYLDEVA  395
            H ++N I  +Y++AQ+LD RR MM +W ADY+D ++
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMM-QWYADYIDSLS  390

296) HYPMC_0824 in NC_015717


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  293 bits (1098),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 175/397 (45%), Positives = 268/397 (68%), Gaps = 11/397 (2%)

Query  1    MPLTDAAIRAAKPGPSPFKISDGGGLHLLVQTGGTKLWRLAYRFAGKQKTLAMGVYPTIA  60
            M+LTD  +++AKP   P+K++DGGG+ LL+++ G+K WR+ YRFAGK+K L++GVYP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREGREKAKRLLADGIDPAAQKRRDKIAAKVSADATFRSIALEYIADRRHALTPLYA  120
            LA ARE R  A+++LA G DP+  K+ +KIA ++S   TF ++A E    + +  +  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DQILRRLEADIFPALGNRPIADIDAPELLETLRKVEKRGALEQAKRLRQTCGQIFRYAVV  180
            D+I+  +E DIFP +G+RPIA+I + ELLE+LRK+EKRGALE+ +++RQ CG++FRYA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TSRAKHDPSAALKGALKPKGRQRHHKPMPRHDLPGFLRTIDDYYGEPRTGLALRLIVLTM  240
            T+RA  +P++ L +AL +  ++ H   +  ++LP FL  + +Y G   T  A ++I+LT 
Sbjct  181  TGRADYNPAPDLASAL-ATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRTTELRAGRWEEFENLDGDEPLWRIPAERMKARFEHLVPLSRQAVAALNELRAMPGAKA  300
            VRT ELR ++WE+   +D +  LW IPAE MK +  H+VP S Q +A +++L   P +K 
Sbjct  240  VRTQELRFAHWED---IDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLE--PISKH  294

Query  301  EGFLF---PSPSKQGCMSNNCMLYALYRLGYHGRATIHGFRGVASTLLNEAGFDDDWIEK  357
            + ++F     P K     +   +  L  LGY GR T HGFR   ST+L+E GF+  WIE 
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIEL--LGYKGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  358  QLAHDERDETRAAYNAAEYLAGRRSMLQWWADWLEQI  394
            QLAH +++  R++YN A+YL GRR M+QW AD ++ +
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

297) ETAF_2789 in NC_017309


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  293 bits (1097),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 177/408 (44%), Positives = 277/408 (68%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LLIN+NGSKYWR++YRF+GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVFDGIDPSEKKKADKIEQSEAL--TFEAVARDWHTACKRKWSDSHS  118
            L++AR KR EA+K++  G DP+E KK +KI    +L  TFEAVAR+WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSMEDGLFTAIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
            + ++ + E ++F  IGKR I+E++  +LL +++ +E  G LE   +++QR   V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G  DYNPA ++A+A+A +K+VH P L  + ++++L  + ++ G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFDNAMWTIPAEREPLPGVKHSHRGSKMRTPHLVPLSCQALAVLTEI  298
            R+ ELRFA+W +IDF+  +W IPAE              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KEISGDHELVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESGL-  357
              IS +H LVFIG +D RKP+S +++N+ +  +GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A+ LD R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

298) ETAC_14745 in NC_020796


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  293 bits (1096),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 173/408 (43%), Positives = 276/408 (68%), Gaps = 24/408 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLVNPNGSKYWRLQYRFNGKQKILALGVYPTVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LL+N+NGSKYWR++YRF GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQSEAL--TFESVARDWHTACKRKWSDSHS  118
            L++AR KR EA+K+++ G DP+E KK +KI    +L  TFE+VAR+WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSMEDGLFTAIGRRKISELNTRDLLAPIKAVEASGRLEVAARLQQRTTAVMRYAVQ  178
            + ++ + E ++F  IG+R I+E++  +LL +++ +E  G LE   +++QR   V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMAGAIAVAKRVHRPALPFERFSELLERIDSFKGRkltklavkltllIFI  238
             G  DYNPA ++A+A+A +K+VH P L  + ++++L  + ++ G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFDNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELRFA+W +IDF+  +W IP+E              KMK PH+VP S Q + L+K +
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REISGECDLVFIGDHDFRKPMSENTVNKALRSMGYDTTAEVCGHGFRAMACSALIESGL-  357
              IS +  LVFIG +D RKP+S +++N+ +  +GY   + + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDERKLMLQWWADYLDLL  403
              W    +E Q++H ++NS+R++Y H A+ +D R+ M+QW ADY+D L
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

299) SbBS512_E4814 in NC_010658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  293 bits (1098),  Expect = 9e-81, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 274/407 (68%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEEHA  118
            LADAR KR EARK++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGSHNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG + IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLQKIDEYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A+ ++ H P L  + +P++L  +  YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGAKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPSKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DP KP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

300) CKO_03532 in NC_009792


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  292 bits (1094),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 177/406 (44%), Positives = 272/406 (67%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFDGKQKVLALGVYPMVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LLIN+NGSKYWR++YRF GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVSVGIDPSEKKKADKIEQSEAL--TFEAVARDWHTACKRKWSDSHS  118
            L++AR KR EA+K+++ G DP+E KK +KI    +L  TFEAVAR+WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSMEDGLFTTIGKRKISELNTRDLLAPIKAVEASGRLEVASRLQQRTTAVMRYAVQ  178
            + ++ + E ++F  IGKR I+E++  +LL +++ +E  G LE   +++QR   V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMAGAIAVAKRIHRPALPFERFSELLERIDNFKGRkltklavkltllIFI  238
             G  DYNPA ++A+A+A +K++H P L  + ++++L  +  + G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFENAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELRFA+W +IDFE  +W IP+E              KMK PH+VP S Q + L+K +
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REISGEFDLVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
              IS +  LVFIG +D RKP+S +++N+ +  +GY     + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMLQWWADYLD  401
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

301) Gbem_2993 in NC_011146


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  292 bits (1095),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 169/395 (43%), Positives = 269/395 (69%), Gaps = 6/395 (1%)

Query  1    MPLTDIAVKSAKPKEKDYKLSDGDGMYLLVTAGGGKRWRLKYRFLGKEKLLALGTYPDIS  60
            M+LTD+ VK+AKPKE+ YKL+DG+GMYLL+ A G+K WR+KYRF GKEK+L++G YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARNKRHEARKQLGHGIDPGAERKALKEVQAQEAAEIKNSFKLVACEWHSKFSGTWSN  120
            L++AR+KR EARK L+ G DPG  +   KE +      +KN+F  VA EWH   ++ WS 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAK---KEEKIALQMSLKNTFEAVAREWHQTKADRWSL  117

Query  121  GHAGTIMDRLTRDVFPWLGDKPICEVEPVDILGVLRRVESRGALETAHRIRTICGQVMRY  180
               + I+D + +D+FP +G +PI E+ P+++L  LR++E RGALE  +++R  CG+V RY
Sbjct  118  RYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  181  AVATGRAKRDSAADLRGALPPANAKHHASMTDPKEVAELLRAIDGFKGTFHVKCALQLAP  240
            A+ TGRA  ++A+DL +AL+ ++  H + +T ++E++++L  + G+ G++  K A Q+  
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  241  LLFVRPGELRQMEWAELDLDGRMWNIPGVKMKMGQPHIVPLAHQAAEILGQLKPLTGAGR  300
            L  VR  ELR  +W ++D+++++W+IP+  MKM +PHIVP ++Q   ++ QL P++    
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  301  YVFPCHRSPLRPMTNNAVNAALRRMGYTSDEMTGHGFRAMARTILDEVLQVRPDFIEHQL  360
             VF  +  P +P++++++N  +  +GY +  +TGHGFR    TIL+E     +  IE QL
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  361  AHAVKDPNGRAYNRTAHLAERRKMMQTWADYLDGL  395
            AH  K++   +YN++  L  RR MMQ  ADY+D+L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

302) W5S_1543 in NC_017845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  292 bits (1092),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 177/407 (44%), Positives = 270/407 (67%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRSAKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALTD+KV++AKP E+PYKL+DG GM+LL+++NGSKYWR++YR  GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQKRDEARKLIAAGVDPNEHKKAVKTQQQDD-EQTFEAVARAWH-TDNKKWSESHA  118
            L++AR+KR EARK++AAG DP E KK  K   Q    +TFEAVAR WH T   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERILKSLSDNIFPAIGSKHISDLKTRDLLRPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
            + I+ ++  +IFP IG + I+++K  +LL +++ +E+ G LE  ++++QR   +  YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHrpalalerlpellGRIDGYKGREFTKWVINLSLLIFI  238
             G  DYNPA D+A+A+   K  H P L+ + LP++L  + GY G  +TK   ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWPEIDFERALWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILTKI  298
            R+ ELRFA+W +IDFE  LW IP+E              KM  PH+VP S Q + ++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S H  LVFIG + +RKP+S  ++N+ ++ +GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADFLDA  402
              W    +E Q++H ++N++R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

303) Galf_2041 in NC_014394


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  291 bits (1091),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 181/372 (49%), Positives = 263/372 (71%), Gaps = 4/372 (1%)

Query  22   DGDGMYIEVMPSGSKYWRLKYRYAGKEKRLALGVYPEVSLKdarerrdaarKLIANGTDP  81
            DG+GMY+ + ++GSKYWR+KYR+AGKEK L++GVYP+V+L DARE+R  ARK++A G DP
Sbjct  22   DGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDP  81

Query  82   GEAKQAQKREGKIAAANTFEAVAREWVENRSNDWTAGHKALTLRTLEQDAFPSIGRRPIA  141
            GEAK+ +K   +++  NTFEAVAREW + +++ W+   +   + T+E+D FP IG+RPIA
Sbjct  82   GEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIA  141

Query  142  EISSSEVLATVRAIEKRGALEIAGRVLQRCSAVFRYAIATDRCKNNPAFKMSEALKSPTR  201
            EI + E+L ++R +EKRGALE   +V QRC+ VFRYAI T+R   NPA  ++ AL +P +
Sbjct  142  EIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKK  201

Query  202  SHYNTIEKGGFPKLLRDIDGYQGSPMTTYILQLMALTFTRTGELVNAEWKEIDLDRAEWL  261
             H+  +    +P +L D+ GY GS +T    Q++ LT  RT EL  A+W +ID++   W 
Sbjct  202  VHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWE  261

Query  262  IPAERMKMRRPHLVPLSVQAVAVFREAAKLSGDRVHVFPNRNDPSQPASNAIILRALGRM  321
            IPAE MKM+RPH+VP S Q +A+F++   +S ++  VF  RNDP +P S+  I + +  +
Sbjct  262  IPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELL  321

Query  322  GYTGKMTGHGFRSAASTMLNENKSKWGIHRDTIELQLAHVEKNASRAAYNFAEYLDERRT  381
            GY G++TGHGFR + ST+L+E+    G++   IE+QLAHV+KN+ R++YN A+YLD RR 
Sbjct  322  GYKGRLTGHGFRHTMSTILHEQ----GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRRE  377

Query  382  MMQQWADHLDKL  393
            MMQ  AD +D L
Sbjct  378  MMQWYADYIDSL  389

304) KOX_09480 in NC_016612


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  291 bits (1090),  Expect = 4e-80, Method: Compositional matrix adjust.
 Identities = 175/406 (44%), Positives = 284/406 (70%), Gaps = 25/406 (6%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGSGMHLLVHPNGSKYWRLQYRFGGKQKMLALGVYPEIk  60
            MALTD+KV+TAKP ++ YKL+DG+GM LL+++NGSKYWR++YRF+GK+KML++GVYP++ 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   ladararrdearkllaNGVDPGDKKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHA  117
            LADAR +R EARK+LA G DPG+ KK++K+    +   TF  VA EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  HRVLKSLEDNLFAALGERNITELKTRDLLAPIKAVEMSGRLEVAARLQQRTSAIMRYAVQ  177
            + ++ ++E ++F+ +G R I+E+K  +LL +++ +E  G LE   +++QR + + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFI  237
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + GYTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  297
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  356
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHMERNSVRAAYIHKAEHLDERKFMLQWWADFLD  400
              W    +E Q++H+++NS+R++Y H A+ LD R+ M+QW AD++D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

305) Xaut_3444 in NC_009720


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  289 bits (1083),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 180/396 (46%), Positives = 271/396 (69%), Gaps = 11/396 (2%)

Query  1    MPLTDTAARSAKGREKPYKLADGGGLYLLVNPDGARYWRLNYRFAGKQKTLALGTYPITS  60
            M+LTD   ++AK +E+PYKLADGGG+YLL+N++G++YWR++YRFAGK+K L++G YP  +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKGRETAKEQLAARIDPSearraekraarLHSSRIFEVVAQEWFAAKLPGWVPSYS  120
            LADAR  R  A+  LAA  DP+EA++ EK A ++     FE VA+EW  +K   W   Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DRLLSRLEADIYPTLGHRPIADIEPPEVLEVIRKVETRGAIELAKREMQVIGQIFHFAIA  180
            D ++  +E DI+P +G RPIA+I P E+LE +RK+E RGA+E  ++  Q  G++F++AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  SGRAKRDPTQDLRGALKSPGRQKHHRALPREDLPDFLKALDAYDGEPMTKLALKLMVLTF  240
            +GRA  +P+ DL +AL +P ++ H   L  ++LP+FL  L +Y G  +TK A ++++LT 
Sbjct  181  TGRADYNPAPDLASALATP-KKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRTTELRAARWSEFEGLDGPEPLWRIPPERMKMRFEHLVPLSPQAVAVLQELRPLAGRSP  300
            VRT ELR A+W   E++D    LW IP+E MKM+  H+VP S Q +A++++L P++ + P
Sbjct  240  VRTQELRFAHW---EDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  301  QLF---PSPSKEGFMSNNTMLFAMYRMGYHGRATVHGFRGVASTWLNEAGYHPDWIERQL  357
             +F     P K     +   ++ +  +GY GR T HGFR   ST L+E G+++ WIE QL
Sbjct  297  LVFIGRNDPRKPISKESINQVIEL--LGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  358  AHDERNEVRGAYNSAQYLTGRRQMMCDW-ANFLDGL  392
            AH ++N +RG+YN AQYL GRR+MM +W A+++D+L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMM-QWYADYIDSL  389

306) DVU1527 in NC_002937


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  289 bits (1083),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 164/394 (42%), Positives = 273/394 (70%), Gaps = 8/394 (2%)

Query  2    LTDIKARAAKPAEKVYRLYDGGGMYLEVPPSGNKRWRLKYRVNGKEKRLSLGVYPNVGLK  61
            LTD+K ++AKP E+ Y+L DGGGMYL + ++G+K WR+KYR  GKEK LS+GVYP+V L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EAREKRDELRRLIAEGIDPAAQRCPQKVA---PTADSFEMVAREWMDLRSPAWAPRHLST  118
            +AREKR E R+++A G DP+  +  +K+A   +  ++FE VAREW + ++  W+ R    
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  119  TCQRLEAYIFPHIGPLPIDQIGPLDVLNALRIVEKRGAVEAARKTLSICSQVFRYAVASA  178
              + +E  IFP IG  PI +I P+++L+ALR +EKRGA+E  RK    C++VFRYA+ ++
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  179  RIQSDPCRDLRGALKTRQPGHYAAIVDPKDVGALMRAIDGYSGAMVVRCALRFLALTFVR  238
            R + +P  DL +AL T +  H+ +++ ++++  ++  + GY+G+++ + A +++ LT VR
Sbjct  183  RADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  239  PGELRAAEWNEFDMERRIWTIPAHKMKKRREHIVPLSTQALAVLRDVRATAPRLNSPMVF  298
              ELR A+W+++D E ++W IPA+ MK +R HIVP S Q +A+++++ + +   + P+VF
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISK--HHPLVF  299

Query  299  QSVRLRSDRGLSENTLLVALRSLGYGQGTMTAHGFRAMASSLLNGLGYNPDVIERQLAHI  358
             + R  + + +S +++   +  LGY +G +T+HGFR   S++L+  G+N+  IE QLAH+
Sbjct  300  IG-RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  359  EGNKIRAAYHRTEYLEERTAMMQAYADYLDSLRD  392
            + N IR++Y++++YL+ R  MMQ YADY+DSL +
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

307) Deval_1767 in NC_017310


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  289 bits (1083),  Expect = 1e-79, Method: Compositional matrix adjust.
 Identities = 164/394 (42%), Positives = 273/394 (70%), Gaps = 8/394 (2%)

Query  2    LTDIKARAAKPAEKVYRLYDGGGMYLEVPPSGNKRWRLKYRVNGKEKRLSLGVYPNVGLK  61
            LTD+K ++AKP E+ Y+L DGGGMYL + ++G+K WR+KYR  GKEK LS+GVYP+V L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EAREKRDELRRLIAEGIDPAAQRCPQKVA---PTADSFEMVAREWMDLRSPAWAPRHLST  118
            +AREKR E R+++A G DP+  +  +K+A   +  ++FE VAREW + ++  W+ R    
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  119  TCQRLEAYIFPHIGPLPIDQIGPLDVLNALRIVEKRGAVEAARKTLSICSQVFRYAVASA  178
              + +E  IFP IG  PI +I P+++L+ALR +EKRGA+E  RK    C++VFRYA+ ++
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  179  RIQSDPCRDLRGALKTRQPGHYAAIVDPKDVGALMRAIDGYSGAMVVRCALRFLALTFVR  238
            R + +P  DL +AL T +  H+ +++ ++++  ++  + GY+G+++ + A +++ LT VR
Sbjct  183  RADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  239  PGELRAAEWNEFDMERRIWTIPAHKMKKRREHIVPLSTQALAVLRDVRATAPRLNSPMVF  298
              ELR A+W+++D E ++W IPA+ MK +R HIVP S Q +A+++++ + +   + P+VF
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISK--HHPLVF  299

Query  299  QSVRLRSDRGLSENTLLVALRSLGYGQGTMTAHGFRAMASSLLNGLGYNPDVIERQLAHI  358
             + R  + + +S +++   +  LGY +G +T+HGFR   S++L+  G+N+  IE QLAH+
Sbjct  300  IG-RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  359  EGNKIRAAYHRTEYLEERTAMMQAYADYLDSLRD  392
            + N IR++Y++++YL+ R  MMQ YADY+DSL +
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

308) Neut_1125 in NC_008344


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1078),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 166/393 (43%), Positives = 264/393 (68%), Gaps = 10/393 (2%)

Query  1    MKLTDSAIRAAKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETT  60
            M LTD  +++AKPKE+ YKL+DG G+ LLI ++GSK WR +Y F  KE MLS+G YP+ T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTER-H  119
            LA+AR  +   + IL  G +P+  +KEEK    +S+ N+FEAVAR    +W ++K++R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAR----EWHQTKADRWS  116

Query  120  VAY---TLRRMEADIFPFIGAKPVNTLTAMHFIELVYKVQSRGALDIAKRVLTMCGQVMR  176
            + Y    +   E DIFP+IG +P+  + +M+++E + K++ RGAL+  ++V   CG+V R
Sbjct  117  LRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFR  176

Query  177  YAVQHGLSERNPAADIKPADILKKRKKVNHKRIPESELPDLLQKINQYDGQPLTRLALQL  236
            YA+  G ++ NPA+D+  A  L   KKV+   +  +ELP++L  +  Y G  +T+ A Q+
Sbjct  177  YAIVTGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQI  234

Query  237  MTLTFIRTSELIGGRWEEISFDNAEWRIPPERMKMRSQHIVPLSDQAITVLREIKALNSD  296
            + LT +RT EL  ++WE+I F+   W IP+E MKM+  HIVP S+Q I++++++ +++ +
Sbjct  235  IMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH  294

Query  297  PVLLFPSERRNGKTMSNNTIIYALYRIGYKGRMTGHGFRGLASTVLHEKNFDHKWIELQL  356
              L+F +     K +S+++I   +  +GYKGR+TGHGFR   ST+LHE+ F+  WIE+QL
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERDEVSAAYNHALYLEQRRKMMQWWGEYIE  389
            AH +++ + ++YNHA YL+ RR MMQW ++YI+
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYID  387

309) Neut_1755 in NC_008344


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 166/393 (43%), Positives = 264/393 (68%), Gaps = 10/393 (2%)

Query  1    MKLTDSAIRAAKPKEKQYKLTDGNGLTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETT  60
            M LTD  +++AKPKE+ YKL+DG G+ LLI ++GSK WR +Y F  KE MLS+G YP+ T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARSIHDGYKAILKQGINPSTHRKEEKRKAIVSVENSFEAVARTWWMHWKHAKTER-H  119
            LA+AR  +   + IL  G +P+  +KEEK    +S+ N+FEAVAR    +W ++K++R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAR----EWHQTKADRWS  116

Query  120  VAY---TLRRMEADIFPFIGAKPVNTLTAMHFIELVYKVQSRGALDIAKRVLTMCGQVMR  176
            + Y    +   E DIFP+IG +P+  + +M+++E + K++ RGAL+  ++V   CG+V R
Sbjct  117  LRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFR  176

Query  177  YAVQHGLSERNPAADIKPADILKKRKKVNHKRIPESELPDLLQKINQYDGQPLTRLALQL  236
            YA+  G ++ NPA+D+  A  L   KKV+   +  +ELP++L  +  Y G  +T+ A Q+
Sbjct  177  YAIVTGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQI  234

Query  237  MTLTFIRTSELIGGRWEEISFDNAEWRIPPERMKMRSQHIVPLSDQAITVLREIKALNSD  296
            + LT +RT EL  ++WE+I F+   W IP+E MKM+  HIVP S+Q I++++++ +++ +
Sbjct  235  IMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH  294

Query  297  PVLLFPSERRNGKTMSNNTIIYALYRIGYKGRMTGHGFRGLASTVLHEKNFDHKWIELQL  356
              L+F +     K +S+++I   +  +GYKGR+TGHGFR   ST+LHE+ F+  WIE+QL
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  357  AHAERDEVSAAYNHALYLEQRRKMMQWWGEYIE  389
            AH +++ + ++YNHA YL+ RR MMQW ++YI+
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYID  387

310) int in NC_011748


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

311) O3M_22875 in NC_018650


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

312) O3K_22970 in NC_018658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

313) SFxv_3245 in NC_017328


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

314) S4822 in NC_004741


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

315) SF2964 in NC_004337


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1079),  Expect = 3e-79, Method: Compositional matrix adjust.
 Identities = 164/407 (41%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ + GY G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S QV+A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGL-  356
            +  + ++ L+F G +DPRKPIS +++N+ + ++GY     + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDA  401
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

316) SPC_4619 in NC_012125


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1077),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 173/406 (43%), Positives = 274/406 (68%), Gaps = 24/406 (5%)

Query  1    MALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWRLQYRFGGKQKVLALGVYPMVS  60
            MALTD+KV+T+KP ++P+KL+DG GM LLIN+NGSKYWR++YRF+GK+K+L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LGEARRKRDEAKKLVSDGIDPSEKKKADKIEQSEAL--TFEAVARDWHTACKRKWSDFHS  118
            L++AR KR EA+K+++ G DP+E KK +KI    +L  TFEAVAR+WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERVLKSLEDNLFSSIGQRKIAELKTKDLLDPVKTVAASGRLEVAARLQQRTTVIMRYAVQ  178
            + ++ ++E ++F+ IG+R IAE+K  +LL++++ +   G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQEMSGAIAVAKRTHRPALPFDRFSELLERIESFKGRkltklavkltllIFI  238
             G  DYNPA ++++A+A +K+ H P L  + ++++L  + ++ G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFVNAMWTIPGEREPLPGVKHSHRGSKMKTPHLVPLSRQALELLKAI  298
            R+ ELRFA+W +IDF   +W IP+E              KMK PH+VP S Q + L+K +
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REISGECDLVFIGDHDFRKPMSENTVNKALRSMGYDTTVEVCGHGFRAMACSALIESG--  356
              IS +  LVFIG +D RKP+S +++N+ +  +GY     + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  -KWSRDAVERQMSHQERNSVRAAYIHKAEHLDERKLMLQWWADYLD  401
              W    +E Q++H ++NS+R++Y H A+ LD R+ M+QW ADY+D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

317) Ser39006_3432 in NC_022268


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  288 bits (1077),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDLKVKSAKPSSKPIKLTDGFGMHLLVHTNGSKYWRFQYRFAGKQKMLALGVYPSVS  60
            MALTD+KVK+AKP  +P KL+DG GM LL+++NGSKYWR +YRFAGK+KML++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARERRDNARKLIANGIDPSEKKKADKIEESGAL--TFETVARSWHSSNKT-WSEGHR  117
            LA+ARE+R +ARK++A G DP+E KK +KI    +L  TFE+VAR WH ++   WS   R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  TLILNSLTTHVFPIIGQRNVTDLKTRDLLVPVKKAEQTGHLELASRLQQRITAIMRYAVH  177
              I++++  ++FP IG+R ++++K  +LL +++K E+ G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  NALIEHNPAYDLAGAIATVKSVHRPALSLERIAELMERIEAYKGKGLTQLAVRLCLLTFI  237
             +  + NPA DLA+A+AT K VH P L+ + +++++  + +Y G  +T+ A ++ +LT +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEFDFKNALWTIPAEREPLKNIKFSHRGSKMKSPHLVPLSKQSLAILKEI  297
            R+ ELRFA+W ++DF   LW IPAE              KMK PH+VP S Q +A++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KAISGAHKFVFTGFSYADKPISENTINKALRAMGYNTQKDVCCHGFRTMACSALIESGL-  356
             +IS  H +VF G + + KPIS ++IN+ +  +GY+ +  +  HGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERSSVRAAYIHKAEHLDERRLMLQWWANFLDA  401
              W    +E Q++H +++S+R++Y H A+ LD RR M+QW A+++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

318) YpsIP31758_0809 in NC_009708


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  287 bits (1076),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 171/412 (42%), Positives = 272/412 (67%), Gaps = 25/412 (6%)

Query  1    MALTDVKVRSAKTEDKPYKLTDSDGMHLLVHPNGSKYWRLRYRYLGKENTLALGVYPALS  60
            MALTDVKV++AK  ++PYKL+D++GM LL+++NGSKYWR++YR+ GKE+ L++GVYP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARAKRDAARKLIAEGSDPSEVKRAKKALPDAT--QTFEVIARRWHAAN-KQWSEQHS  117
            L++AR KR  ARK++A G+DP+E K+  K   + +  +TFE +AR WH ++  +WS +  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKVLKNLEMYLFPVNGTRDIASLRTPDLLIPIRVAENAGFLEVSARLLQRTTAIMRYAVQ  177
              ++  +E  +FP  G R IA ++  +LL ++R  E+ G LE   ++ QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  CGIIDYNPAQDMVGALTTVKRVHRPALELNRIPELLSRIEGYKGQPLTRLAVMLNLFVFI  237
             G  DYNPA D+ +AL+T K+VH P L  N +P++L+ + GY G  +T+ A  + ++  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDTERALWTIPAEREPIPGVKFSHRGSKMRTTHLVPLSQQSLAMLEEL  297
            R+ ELR+A+W +ID E  LW IPAE              KM+  H+VP S+Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  RLSGGESGLIFPGDHDPRKPISENTINKALRLMGYETKTEVCGHGFRAMACSALIESGL-  356
               + +  L+F G +DPRKPIS ++IN+ + L+GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFLDTNREIA  406
              W    +E Q++H ++N++R++Y H A++LD RR M+QW AD++D+  E+A
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSELA  393

319) Pecwa_1669 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  287 bits (1075),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 269/407 (67%), Gaps = 24/407 (5%)

Query  1    MALTDIKVRSTKPEEKPYKLTDGNGMFLLVHTNGSKYWRLRYRSDGKEKTLALGVYPEVS  60
            MALTD+KV+++KP E+PYKL+DG GM+LL+++NGSKYWR++YR  GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARQKRDEARKLIAAGVDPNEHKKAVKTQQQDD-AQTFEVVARAWH-ADNKKWSGSHA  118
            L++AR+KR EARK++AAG DP E KK  K   Q    +TFE VAR WH +   +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ERILKSLSDNIFPAIGGAHIANLKTRDLLTPIKSVERSGRLEVAKRLKQRVTAIMTYAVQ  178
            + I+ ++  +IFP IG   IA++K  +LL +++ +E+ G LE  ++++QR   +  YA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  NGLIDYNPAQDMAGAIMPGKVEHrpalalerlpellGRIDGYKGREFTKWVINLSLLIFI  238
             G  DYNPA D+A+A+   K  H P L+ + LP++L  + GY G  +TK   ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWPEIDFERALWTIPPEREPIPGVKFSERGSKMHTPHLVPLSRQALEILKKI  298
            R+ ELRFA+W +IDFE  LW IP+E              KM  PH+VP S Q + ++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  REVSGHCELVFIGDHSSRKPVSEGTVNKALQTMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S H  LVFIG + +RKP+S  ++N+ ++ +GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNGVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H ++N++R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

320) NAL212_1009 in NC_015222


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  287 bits (1074),  Expect = 8e-79, Method: Compositional matrix adjust.
 Identities = 174/390 (45%), Positives = 263/390 (68%), Gaps = 3/390 (0%)

Query  2    LTDTAIRNAKPRDKFYKVSDSGGLYLLVKATG-KYWRMDYRFVGKRKTLAIGVYPTVSLV  60
            LTD  ++ AKP+++ YK++D+GG+YLL++A G KYWRM YRF GK K L+IGVYP V+L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  61   AARKKRDEARELLGKHIDPSLAKAINKRIVLTAAENTFKAVALEWHTKTSKSWAESTANN  120
             AR KR EAR +L+   DP+ AK  +K  +  +  NTF AVA EWH   +  W+    ++
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  121  IKRYLEKDIFPWLGNRAIKDIGAPDLLAVLRKIESRGAHEKAQRCREYAGRVFRYAIATG  180
            I   +EKDIFP +G+R+I +I + +LL  LRK+E RGA EK ++ R+  G VFRYAI TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  181  RAERDPSGDLRGALTPVKVKHHASITEPKAIGALLRSIWGFNGSYITKCALQLAPLVFVR  240
            RA+ +P+ DL +AL+  K K H ++  ++ +  +L  + G+ GS ITK A Q+  L  VR
Sbjct  183  RADYNPAPDLASALATPK-KVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  241  PGELRQAEWQEIDFDKQEWRIAGNKMKMGEAHIIPLSPQVIEILQSIHPLTGDGQYIFPS  300
              ELR A+W++IDF+ + W I+++ MKM  +HI+P S QVI +++ ++P++ +   +F +
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  301  IRSSARPMSENTINAALRRMGYEKDEMTGHGFRSMASTLLHEHGWPHEAIERQLAHAERN  360
               + +P+S ++IN  +  +GY K+ +TGHGFR   ST+LHE+G     IE QLAH ++N
Sbjct  302  RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  KVVAAYNYAEHLPKRKEMMRWWADYLDELA  390
             + ++YN A+ L  R+EMM+W ADY+D L+
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

321) Reut_A2365 in NC_007347


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1072),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 176/391 (46%), Positives = 272/391 (70%), Gaps = 3/391 (0%)

Query  7    PLTDTKIRNAKPRERSYKLFDGGGLYLEVMTDGRKLWRFKYVRPSGSESRLGFGVYPAVS  66
            +LTD K++ AKP+ER+YKL DGGG+YL + ++G K WR KY R +G E  L++GVYP V+
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEKMLSIGVYPDVT  60

Query  67   LAQARTQRETARGIVADGRDPGAVKQEERRAARIAAGNSFEAVARDWHNTQKSSWNDVYA  126
            LA+AR +R  AR I+A G DPG  K+EE+ A +++  N+FEAVAR+WH+T+   W+  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  127  GKVLASLENDVFPVLGSTPIADIKAPAILDLLRKVEARGVRDTTKRILQRMRAVFQYGII  186
            + ++ ++E+D+FP +G  PIA+IK+  +L+ LRK+E RG  +  +++ QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  187  YGLCDRNPAADIDSAAALKSESVQHQARVSPLELPQLLRDIDAYEGDAVTRLALQFMTLT  246
             G  D NPA+D+  A+AL +    H + +++ ELP++L D+ +Y G  +T+ A Q++ LT
Sbjct  181  TGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  247  FVRTTEMIQARWVEIDEAKAEWRIPADRMKMRDPHVVPLSTQALAVLAELRAINGHRDLV  306
             VRT E+  A+W +ID     W IPA+ MKM+ PH+VP S Q +A++ +L +I+ H+ LV
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  307  FYSPRGKSGHISNNTMLYALYRMGYHSRMTGHGFRGLASTALNELGFRPDVIERQLAHVE  366
            F +  +    IS++++   +  +GY +R+TGHGFR   ST L+E GF +  IE QLAHV+
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  367  RNKVRAAYNHAQYLPERRQMMQSWADHVHAL  397
            +N +R++YNHAQYL  RR+MMQ  AD +++L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

322) A1122_08715 in NC_017168


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

323) YPA_2939 in NC_008150


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

324) intB in NC_003143


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

325) intB in NC_017154


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

326) intB in NC_017160


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

327) YPN_0651 in NC_008149


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

328) intB in NC_014029


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

329) YpsIP31758_3540 in NC_009708


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1072),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 282/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEEKAYKLTDGDGMVLLVHPNGSKYWRLRYRFGGKEKMLALGIYPEIS  60
            MAL+DVKV++AKP E++YKL+DG+GM LL+++NGSKYWR++YRF+GKEKML++G+YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQSIGKRNITDLGTRDLLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR I+++   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVDVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  ++   GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLT--GHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERKLMIQWWADFFGG  402
              W    +E Q++H ++NS+R++Y H A+ LD R+ M+QW AD++++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

330) YpAngola_A4051 in NC_010159


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVSTGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A++T K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

331) intB in NC_005810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  13   MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  72
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  73   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  130
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  131  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  190
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  191  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  250
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  251  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  310
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  311  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  369
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  370  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  414
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

332) intB in NC_004088


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1070),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 278/407 (69%), Gaps = 24/407 (5%)

Query  13   MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  72
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  73   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  130
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  131  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  190
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  191  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  250
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  251  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  310
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  311  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  369
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  370  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  414
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

333) KPN2242_01530 in NC_017540


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  286 bits (1069),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 280/407 (69%), Gaps = 28/407 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANDVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA + DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAVIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTTIMRYAVQ  178
              ++ ++E ++F+ IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYTGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVNFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELRFA+W +++FE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPR----KNTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  353
             +++ ++ L+F+G +DPR    K+++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  354  --WSKDAVERQMSHQERNTVRAAYIHKAEHLGERRLMLQWWADYLDA  398
              W    +E Q++H ++N++R++Y H A+ L+ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

334) S70_06120 in NC_017731


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  285 bits (1068),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPDVKSYKLTDGAGLHLLVHSNGSKYWRLRYRHLGKEKTLALGLYPDVS  60
            MALTD K+++AKP  ++YKL+DG+G+ LL+++NGSKYWR++YR  GKEK L++G+YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARLKRDEARKLIADGIDPCEQKRVAKAASDANL--SFETIARQWHASN-KKWSESHS  117
            L++AR KR EARK++A G DP E K+  K A + +L  +FE++AR+WH ++  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  EKVLKSLESHVFPYIGLRDITTLKTPDLLIPIRAAESKEIYEIAARLQQRIAAVMRYAVQ  177
            + ++ ++E ++FPYIG R I+ +K  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIGYNPAIDTAGAVTTVQRQHRPALNLDRLPELITRIDAYKGQPVTRLAVMLNLLVFI  237
            +G  +YNPA D A+A++T ++ H P L  + LP+++T + +Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDFDKALWTIPAQRKPIPGVKFSHRGAKMRTPHLVPLSHQAITILKEI  297
            R+ ELR+A+W +IDF+  LW IPA+              KM+ PH+VP S+Q I+++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  WAWTGEHELILTGAHNPFKPMSENTVNKALRVMGYDTKTEICGHGFRTMACSSLVESGL-  356
             + + +H L++ G ++P KP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDQRRLMVQWWADYLDA  401
              W    +E Q++H ++NS+R++Y H A+ +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

335) AHML_14825 in NC_021290


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  285 bits (1066),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 178/388 (46%), Positives = 269/388 (70%), Gaps = 1/388 (0%)

Query  1    MPLSDTAARQAKFTGKQQKLSDEKGLFLLITSSG-KYWRLKFRFGGKEKVLALGVYPEVS  59
            M+L+D   + AK   +  KL+D  G++LLI ++G KYWR+K+RF+GKEK+L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  60   lkearvkreearrllaDGIDPSLARKQSKVASRLASENSFEVIAREWHQGQLARWSPGHA  119
            L +AR KR EAR++LA G DP+ A+K+ K+A +++  N+FE +AREWHQ +  RWS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  120  QRVIESLEADAFPELGLVPVAELTAPIMLDALRKIEARGATETAGRVLQRISSVMRYAIQ  179
            + +I+++E D FP +G  P+AE+ +  +L+ALRK+E RGA E   +V QR + V RYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  TGRVSYNPAQDLKGALRATKQEHRPALPRADLPEFYRRLAAEPLNPATRLAIHLLMLTMT  239
            TGR  YNPA DL +AL + K+ H P L   +LP+F   LA+   +  T+ A +++MLT  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  240  RPGEVRFARWDEFDMARAEWRIPAERMKMRAPHIVPLSRQALAVLEELRLISGHCELLFP  299
            R  E+RFA+W+++D     W IPAE MKM+ PHIVP S Q +A++ +L  IS H  L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  300  SERKLTDPMSENTLSYAMGRMGYKGIATPHGFRALASTILNEEGFDPDVIERQLAHAERN  359
            +      P+S ++++  +  +GYKG  T HGFR   STIL+E+GF++  IE QLAH ++N
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  360  KVRAAYHRAEYLDDRRKLLQWLADFYES  387
             +R++Y++A+YLD+RR ++QW AD+ +S
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDS  388

336) intB in NC_009485


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 179/397 (46%), Positives = 260/397 (66%), Gaps = 10/397 (2%)

Query  1    MPLTDTKCRNAKGQIKSRKLSDGGGLHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVG  60
            M+LTD K + AK + ++ KL+DGGG+ LLI ++G+KYWR+ YR  GK++ L++GVYP V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LIEARASRDDAKRSIAADIDPSIVKRERKRAAKIATGNTFEAVAREWHENWKDARSPYYA  120
            L +AR  R +A++ +AA+ DP+  K+E K A +++  NTFEAVAREWH+   D +S  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  AQILRRLEADAFPAIGRRSIAALEPPELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIV  180
             +I+  +E D FP IG+R+IA + P ELL+ LRK+EKRG  E  R+++Q  G++FR+AIV
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAKRDPSVDLKDALRATGEPQRHRAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTF  240
            TGRA  +P+ DL  AL AT    +   +  +ELP FL  L +Y+G   TK A +++ LT 
Sbjct  181  TGRADYNPAPDLASAL-ATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  LRTTELRAGKWNELENLDENSALWRIPAERMKMRLEHLVPLSRQAVAALRELRTLSGGSP  300
            +RT ELR + W++++    ++ LW IPAE MKM+  H+VP S Q +A +++L  +S   P
Sbjct  240  VRTQELRFAHWEDIDF---EAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  301  NIF---PSPGKGDCMSSNTMLYALYRMGYHGRATTHGFRAVASTILNETNLFNRDWIERQ  357
             +F     P K     S   +  L  +GY GR T HGFR   STIL+E   FN  WIE Q
Sbjct  297  LVFIGRNDPRKPISKESINQVIEL--LGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQ  353

Query  358  LSHVERNEVRRAYNAAEWMPDRRRMMQWWADHITALA  394
            L+HV++N +R +YN A+ + +RR MMQW AD I +L+
Sbjct  354  LAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

337) KPK_4978 in NC_011283


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 284/407 (70%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ IGKR IA++K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRlltqlaveltllvFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G ++T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGERELLDGVKHSQRGSKMRTPHLVPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMNGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
             +++ ++ L+F+G +DPRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADYLDA  402
              W    +E Q++H +++S+R++Y H A+ L+ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

338) S70_13465 in NC_017731


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  285 bits (1067),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 165/407 (41%), Positives = 277/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDAKIRAAKPDVKSYKLTDGAGLHLLVHTNGSKYWRLRYRHLGKEKTLALGLYPDVS  60
            MALTD K+++AKP  ++YKL+DG+G+ LL+++NGSKYWR++YR  GKEK L++G+YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARLKRDEARKLIADGIDPCEQKRVAKAASDANL--SFETIARQWHASN-KKWSESHS  117
            L++AR KR EARK++A G DP E K+  K A + +L  +FE++AR+WH ++  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  EKVLKSLESHVFPYIGLRDITTLKTPDLLIPIRAAESKEIYEIAARLQQRIAAVMRYAVQ  177
            + ++ ++E ++FPYIG R I+ +K  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIGYNPAIDTAGAVTTVQRQHRPALNLDRLPELIARIDAYKGQPVTRLAVMLNLLVFI  237
            +G  +YNPA D A+A++T ++ H P L  + LP++++ + +Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDFDKALWTIPAERKPIPGVKFSHRGAKMRTPHLVPLSHQAITILKEI  297
            R+ ELR+A+W +IDF+  LW IPAE              KM+ PH+VP S+Q I+++K++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  WAWTGEHELILTGAHNPFKPMSENTVNKALRVMGYDTKTEICGHGFRTMACSSLVESGL-  356
             + + +H L++ G ++P KP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  357  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDQRRLMVQWWADYLDA  401
              W    +E Q++H ++NS+R++Y H A+ +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

339) YPK_3676 in NC_010465


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  284 bits (1063),  Expect = 5e-78, Method: Compositional matrix adjust.
 Identities = 173/407 (43%), Positives = 279/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK+LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMSGRLEVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLSRQALAILGKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH+VP S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADDLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW AD +D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

340) Bamb_0912 in NC_008390


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  284 bits (1062),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 176/399 (45%), Positives = 277/399 (70%), Gaps = 10/399 (2%)

Query  1    MPLTDTTIRNTKPVEKPIKLFDGGGLFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPEVT  60
            M+LTD  ++ +KP E+P KL DGGG++LL+ + G +YWR+KYR AGKEK+L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARRKRDEARERLAAGIDPGEAKKAEKRTVRLNAENSFEAVAREWHAKYAPTWSENHA  120
            LA AR KR EAR  LAAG DPGEAKK EK +++++  N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GRILRRLEVDAFPWISGKPIADLAPPDVLDALRRVEKRGALETAHRLHANISQVCRYAVA  180
            + I+  +E D FP I+ +PIA++ P ++L+ALR++EKRGALE  ++++   ++V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAQRDVTADLRGALPPVQQEHMAALTDPKQVAELLRAIDGYQGTFPVMCALRLAPLLF  240
            TGRA+ + ++DL +AL+  ++ H + LT +++++++L  + GY G++    A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  QRPGELRAAEWAELDLDAGTWEIPSDRMKRTKQGKASGGAHIVPLSSQAVAVLGELHALT  300
             R  ELR A+W ++D++A  WEIP++ MK  +       +HIVP S Q +A++ +L++++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-------PHIVPPSEQVIALFKQLEPIS  292

Query  301  GNGRFLFPSVRTKDRPMSDNTINGALLRLGYNGDTMTGHGFRAMARTILDEVLGLPAAII  360
             +  ++F +     +P+S ++IN  +  LGY+G  +TGHGFR    TIL+E  G+ +A I
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYNRTAHLPQRREMMQRWADYLDGL  399
            E QLAH  K+++  +YN++  L  RREMMQ+ ADY+D+L
Sbjct  351  EMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

341) Mpe_A1087 in NC_008825


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 176/390 (46%), Positives = 264/390 (68%), Gaps = 5/390 (1%)

Query  1    MKLTDLKLRTLTQSGKHF---DGGGLYLEVTAAGGRYWRMKYRHGGKEKRLAFGVYPEVT  57
            M LTD+K++T     + +   DGGG+YL + A G++YWRMKYR +GKEK L++GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  58   LraardrrdearrVLDQGGDPGELRKaakaqaaheaSNTFEAVARDWLTHQADSWEAVTL  117
            L  AR++R EAR++L  GGDPGE +K  K        NTFEAVAR+W   +AD W     
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  ARIKAAFKADVFPQLGARPMAQIKPREVATVVKAIEARGAGDMAARVLQRIRAVFRFAVV  177
              I  +F  D+FP +G RP+A+IKP E+   ++ +E RGA +   +V QR   VFR+A+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  HERIDSNPMLDLQPGELLKPRQVRHRAALADRDLPVFLEKLAAYDGDVSTSAALRLLMLT  237
              R D NP  DL ++ L  P++V H + L+  +LP FL  LA+Y G + T +A +++MLT
Sbjct  181  TGRADYNPAPDL-ASALATPKKV-HFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  AVRPGELRGARWDEIDMDAAEWRIPAERMKMRSPHVVPLSRQALDVLQLMQPLSGERELV  297
            +VR  ELR A+W++ID +A  W IPAE MKM+ PH+VP S Q + +++ ++P+S ++ LV
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  298  FPSPYYPGKPLSENTLNSALARMGYKGLATAHGFRALFSTVANESGHSPDVIERQLAHVE  357
            F +   P KP+S +++N  +  +GYKG  T+HGFR   ST+ +E G ++  IE QLAHV+
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  358  RNAVRAAYHRSTYLKDRAQLMQWWADYLDG  387
            +N++R++Y+++ YL +R ++MQW ADY+D+
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDS  388

342) SFxv_4606 in NC_017328


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 166/399 (42%), Positives = 274/399 (69%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A+ L+ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQ  380

343) S4839 in NC_004741


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 166/399 (42%), Positives = 274/399 (69%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A+ L+ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQ  380

344) SF4224 in NC_004337


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1058),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 166/399 (42%), Positives = 274/399 (69%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A+ L+ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQ  380

345) SFV_4227 in NC_008258


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1059),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 166/399 (42%), Positives = 273/399 (69%), Gaps = 24/399 (6%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERSSVRAAYIHKAEHLGERRLMFE  394
              W    +E Q++H +++S+R++Y H A+ L+ RR M +
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQ  380

346) YPDSF_3248 in NC_009381


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1061),  Expect = 7e-78, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRHRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++ RF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWHASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREWH ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

347) Tbd_0943 in NC_007404


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1060),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 173/391 (45%), Positives = 260/391 (67%), Gaps = 7/391 (1%)

Query  2    LTDMKVRQAKPGPNVQKLSDSQGLFLHISPSGGKWWRLAYRYTGKQKLLSLGTYPAVSLA  61
            LTD+KV+ AKP     KL+D+ G++L I+++G+K WR+ YR++GK+K+LS+G YP V+LA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   DARQRRDEAKKLLAHGVDPAENRKATKQARQDRASNSFEAVAREWHAKFSSTWSANHSDR  121
            DAR++R EA+K+LA G DP+E +K  K A Q    N+FEAVAREWH   +  WS    D 
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  122  IIRRLENDIFPWLGDKPIADITPPTLLAALRRIEERGAVETAHRAMQNCGQVFRYSVATG  181
            II  +E+DIFP +G +PIA+I P  LL ALR++E RGA+E  ++  Q CG+VFRY++ TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  182  RAERDPSQDLKGALPPVAKSHFKSITDPVQIGVLLRNIDGYSGGPVVRSALRLAPLIFVR  241
            RA+ +P+ DL +AL+   K HF  +T   ++  +L ++ GY+G+ + ++A ++  L  VR
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTAN-ELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  242  PGELRHAEWAHFDLGAAEWRYT--VSKTNTEHIVPLSRQAISVLEELQPLTGHKRYVFPA  299
              ELR A+W ++D+ A  W     V K +  HIVP S Q I+++ +L+P++ H   VF +
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  300  NRGEGRPMSENTVNAALRSLGYDKETLTGHGFRAMARTLLDEVLGFRPDIIEHQLAHAVR  359
              +  +P+S +++N  +  LGY K  LTGHGFR    T+L+E  GF +  IE QLAH  +
Sbjct  302  RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDK  359

Query  360  DPLGRAYNRTTHLPERRKMMQGW-ADYLDEL  389
            +++  +YN++  L  RR MMQ W ADY+D L
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

348) Dd586_0881 in NC_013592


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  283 bits (1060),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 271/407 (67%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTAS  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP  +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKLREEARAVLCAGADPGVKKQQDKQARKNG--NTFETVSRQWVAANI-RWTEAHA  117
            LA AR  R EAR +L AG+DPG  K+++K A + +  NTFE+V+R+W  ++  RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKVLRSLELHVFPLIGKTPLTDLKTADLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
              ++ ++E ++FP IGK P++++K  +LL +LR  EK+G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  EGLIASNPANDLCGAITTPPKNHYPAlplerlpellerIEGYSGRLLTRLAVQLNLLIFI  237
             G    NPA DL +A++TP K H+P L  + LP++L  + GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID++  +W +PA+              KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNGDLLFPGDHDARKPMSENTINKALRTMGYDTQADICGHGFRTIACSALIESG--  355
              +S +  L+F G +D+RKP+S ++IN+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A+ LD R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

349) KN400_0440 in NC_017454


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  282 bits (1055),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 170/394 (44%), Positives = 269/394 (69%), Gaps = 5/394 (1%)

Query  6    IPLSALKIDKAKPQEKEVKLYDGGGLFLLITPSGGKLWHLKYRYGGKEKKLALGAYPLVS  65
            ++L+ +K+  AKP+E+  KL DGGG++LLI ++G+K W++KYR++GKEK L++G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  66   LEGARQRREDAKKLLANGVDPGEMKKVLKSAAKDKAANTFEVVAREWHHKFSSAGKWSPT  125
            L +AR++R +A+K+LA G DPGE KK  K A +    NTFE VAREWH+  + A++WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ--TKADRWSLR  118

Query  126  HAADILHRLEKDIFPPLGARPISEIKPLDLLRVLERIASRGALDTAHRLRHHCGMIFRYA  185
               +I++ +EKDIFP +G RPI+EIKP++LL  L ++  RGAL+  +++R++CG +FRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  186  VVTERAERDVAADLRGALPPVKNGHHAAPTTPQSLLPLLRAIDVYEGSYIVKCALQLLPL  245
            +VT RA+ + A+DL +AL+  K+ H +  T+ + L  +L  +  Y GS I K A Q++ L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIML  237

Query  246  FFCRPGELRAAEWTEFDFDKAIWEIPATRMKMKQPHIVPLSKQAIAILESLQSLTGSGKY  305
               R  ELR A+W ++DF+  +WEIPA  MKMK+PHIVP S Q IA++  L++++     
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  306  LFPCQRSTQRCMSDNAYNAALRRMGFTKDEATAHGFRASARTILDEVLRIPVVLIEHQLS  365
            +F  +   ++ +S ++ N  +  +G+ K+  T+HGFR +  TIL+E   +    IE QL+
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  366  HSVRDPLGRAYNRTSHLDERKKMMQQWADYLDGL  399
            H  ++++  +YN++  LD R+ MMQ  ADY+D+L
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

350) SYN_01916 in NC_007759


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  282 bits (1055),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 167/393 (43%), Positives = 263/393 (67%), Gaps = 6/393 (1%)

Query  16   IPLTDMKVQKARPQDKPIALFDGGGLYLLITPSGGKLWRFKYRFDKKEKKLALGSYPEIS  75
            ++LTD+KV+ A+P+++P  L DGGG+YLLI ++G+K WR KYRF  KEK L++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  76   LQDARRKREDARRLLANNIDPDSIRKAQKQA-KTEETETFEVIGREWHTKFTPTWTPGHA  134
            L DAR KR +AR++LA   DP+  +K +K A +    +TFE ++REWH   +  W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  135  VTIMSRLERDLFPWIGKRPINQIKAPELLAVLRRVESRGALESAHRIRTIAGQVFRYAVA  194
              I+  +E+D+FP IGKRPI +IK+ ELL  LR++E RGALE  +++R   G+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  195  TGRAERDPAADLKGALPQPRERHHAALTEPKEVAPLLRALDGYQGHFVVKCALRLAPMFF  254
            TGRA+ +PA+DL +AL+ P+  H + LT ++E++ +L  L GY G ++ K A ++  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  255  TRPGELRNAEWSEIDLDEAVWNIPAHKMKMKQAHIVPLCRQAVEILTELKEVTGPSRYVF  314
             R  ELR A+W +ID++  +W+IPA+ MKMK++HIVP   Q + ++ +L  ++     VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  315  PSGRSFARPMSNNAVNAALRRMGYDRETMTGHGFRAMARTILDEVLHVRPDYIEHQLAHA  374
             +     +P+S++++N  +  +GY +  +TGHGFR    TIL+E     +  IE QLAH 
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  375  VRDPNGRAYNRTAHLEERRKMMQIW-ADYLDGL  406
             +++   +YN++  L+ RR MMQ W ADY+D+L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

351) intB in NC_017265


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  282 bits (1057),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 171/407 (43%), Positives = 277/407 (69%), Gaps = 24/407 (5%)

Query  1    MALSDVKVRTAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFDGKEKMLALGKYPEIS  60
            MAL+DVKV+TAKP  ++YKL+DG GM LL+++NGSKYWR++YRF GKEKML++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKQLANGVDPSESKKAVKVEQEQE-AITFEVVAREWYASNRQ-WSEAHS  118
            LADAR +R EARK LA G DP+E+KK  K+  +     TFE VAREW  ++ + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFQAIGKRNIADLGTRDLLPPIKAVEMAGRLQVASRLQQRTTAIMRYAVQ  178
              ++ ++E ++F  IGKR IA++   +LL +++ +E  G L+   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVATGKRKHRAALELNRVSELLHRIDYYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT K+ H + L  N ++++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLIPLSRQALAILEKI  298
            R+ ELRFA+W ++DFE+ +W IP+E              KM+ PH++P S Q +A++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
             ++S ++ L+FIG +DPRKP+S +++N+ + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ LD RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

352) Rpic12D_3122 in NC_012856


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  281 bits (1050),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 168/394 (43%), Positives = 269/394 (69%), Gaps = 9/394 (2%)

Query  1    MSLTDIAIRTAKPTDKPYKLADGGGLYVEVYPTGGKLWRLKYRFGGKEKRLSFGAYPVVS  60
            M+LTD+ ++TAKP ++PYKLADGGG+Y+ + + G+K WR+KYRF+GKEK LS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKDARERRDNAKRLLAGGIDPSIERKMQKAATVERAANSFETVGREWFARYSPTWAEGHA  120
            L DARE+R +A+++LA+G DP+  +K +K A      N+FE+V+REW    +  W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  TKIIRRLEADIFPWLGGRPIAEITAPEVLTVLRRIEARGALDTAHRAHQNCGQIFRYAVA  180
              II  +E DIFP +G RPIAEI + E+L  LR++E RGAL+  ++ +Q CG++FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAIRDPSGDLRGALPPAKHENFASITDPVKVAELLRAIDAFRGTLVVRCALLLAPMVF  240
            TGRA  +P+ DL +AL+ +K  +F+ +T    ++++L  + ++ G+++ + A  +  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTAN-ELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRKAEWADFDLDAGEWRYL--VTKTKTAHLVPLATQAVAILRELHALTGHGRFVF  298
            VR  ELR A+W D+D++A  W     V K K +H+VP + Q +A++++L++++ H  +VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGR-DPKKPMSDAAVNAALRRMGYDTRTEITGHGFRAMARTILHEELNYKPEIIEHQLAH  357
             GR DP+KP+S  ++N  +  +GY  R  +TGHGFR    TILHE+  +++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  358  SVPDALGTAYNRTKFVKERRVMMQAW-ADYLDRL  390
               +++  +YN+++++  RR MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

353) Ppro_2300 in NC_008609


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  280 bits (1048),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 169/392 (44%), Positives = 266/392 (68%), Gaps = 5/392 (1%)

Query  7    PLSDLQVRNAKPKEKQVTLFDGGGLYLLITPTGGKLWRLKYSLFGKEKLLALGTYPEISL  66
            +L+D++V+ AKPKE+   L DGGG+YLLI + G+K WR+KY + GKEK+L++G YP+++L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  67   ADARQRREDARKQVANGIDPGEVKKAQKVSSGEGDENSFEVIAREWHGKFLLNKSESYRD  126
            ADAR++R +ARK +A G DPGE KK +K++   +  N+FE +AREWH       S  YRD
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  127  KMLSNFERDVFPWIGRVAVKNLKAPELLSALRRIEGRGALETAHRTRSACSQVLRYAVAT  186
             ++  FE+D+FP IG+ ++ ++K+ ELL ALR++E RGALE  ++ R  C++V+RYA+ T
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  187  GRAERDCASDLIGALPPYKKGHRAALTDPKEVAPLLRAIDDYQGTFPVKCALKLAPLLFV  246
            GRA+ + A+DL +AL+  KK H + LT ++E++ +L  + +Y G++  K A ++  L  V
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  247  RPGELRKAEWSEVDFKATEWRIPGDKMKMKNDHIVPLASQAVEILKELYPLTGHSKFLFP  306
            R  ELR A+W ++DF A  W IP++ MKMK  HIVP + Q + ++K+L P++ H  ++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  307  SPRSPLRPMSDNAILSALRRMGFEKDEMSGHGFRAMARTILDEVLHVRPDFIEHQLAHAV  366
            +   P +P+S ++I   +  +G+ K+ ++GHGFR    TIL+E     +  IE QLAH  
Sbjct  301  GRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  367  RDPNGRAYNRTAHLAERKKMMQAW-ADYLDDL  397
            +++   +YN++  L  R+ MMQ W ADY+D L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

354) PputW619_4347 in NC_010501


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 172/393 (44%), Positives = 269/393 (69%), Gaps = 4/393 (1%)

Query  1    MALTDTAIRTARPRDKLYRIADAQGLCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVT  60
            MALTD  ++TA+P+++ Y++AD+ G+ L + + G+K WR++YRF GK KML++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAHARERRDAARKLLSQGIDPSAYkqqekaaaeaqaltl-etlaREWYDYNQPRWAPATA  119
            LA+ARE+R  ARK+L+ G DP+  K++EK A +       E++AREW + +  RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  120  SKALQYLESDIFPLIGKRPAAEVQRPELVDLVRKIEQREAFNVARKVRQWLSQIFRFGLA  179
               ++ +E DIFP IGKRP AE++  EL++ +RK+E+R A++  RKVRQ+ +++FR+++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  180  KGVVAGNPATDLDvvaahaprtrhhphvSeaelpellekleaaQCDFTSKIAIRLLLLTA  239
             G    NPA DL    A + + +     ++     L +    +   + +K A ++++LT+
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGS-IITKTATQIIMLTG  239

Query  240  VRPGELRLAPWDEFDLESATWTIPAARMKARRPHIVPLPRQAVNLLRALHELTGTYPLAF  299
            VR  ELR+A W+++D+E+  W IPA  MK +RPHIVP + Q + L++ L+ ++   PL F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  300  PGRNDRSRPMSENTVNKALSTMGYEGRQTGHGFRHLLSTSLNTRGYNRDWIERQLAHGDQ  359
             GRND  +P+S +++N+ +  +GY GR TGHGFRH +ST L+ +G+N  WIE QLAH D+
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  360  DSIRDTYNHAHYLEQRREMMQTW-ADHVDALAE  391
            +SIR+TYNHA+YL+ RREMMQ W AD +D+L+E
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

355) SARI_03082 in NC_010067


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 172/407 (43%), Positives = 274/407 (68%), Gaps = 24/407 (5%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMFLLVKPNGSRYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM+LL+++NGS+YWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADarkkreearrLVAAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EAR+++AAG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPAIGTRNIAELGTRDLLIPIKAVETSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGVIDYNPAQERAGAVASSNRQHRPALELKRIPELLEKIDGYIGRPLTRWATELTLLIFI  238
            +G  DYNPA + A+A+A++++ H P L  + +P++L  + GY G  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELCFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ EL FA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL-  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHMEHNSVRAAYIHKAEHLDERKLMLQWWADFLDA  402
              W    +E Q++H++ NS+R++Y H A+ LD R+ M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

356) Dda3937_03406 in NC_014500


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  279 bits (1044),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 170/406 (42%), Positives = 271/406 (67%), Gaps = 25/406 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LANARKLREEARTILSAGDDPGVKKQHDKQAKKNG--NTFEAIARQWVAANI-RWSEAHA  117
            LA+AR  R EAR IL+AG+DPG  K+++K A + +  NTFEA+AR+W  ++  RWS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
              ++ ++E ++FP IG+  ++++K  +LL +LR  EK+G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  EGLIASNPANDLCGAITPPPKNHYPAlplerlpellerIEGYSGRLLTRLAVQLNLLIFI  237
             G    NPA DL +A++ P K H+P L  + LP++L  + GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID++  +W +PA+              KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNGDLLFPGDHDARKPMSENTINKALRTMGYDTQADICGHGFRTIACSALIESG--  355
              +S +  L+F G +D+RKP+S ++IN+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLD  400
              W    +E Q++H ++N +R++Y H A+ LD R +MMQW +DY+D
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

357) C380_06330 in NC_018708


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 180/398 (46%), Positives = 271/398 (69%), Gaps = 14/398 (3%)

Query  1    MPLTDTACKKATCPEGRPSVRLADEKALYLEVTAAGGKYWRWKYRYGGKEKRLALGVYPD  60
            M+LTD   K A  P  RP  +LAD  ++YL + A G+KYWR KYR++GKEK L++GVYPD
Sbjct  1    MALTDVKVKTAK-PKERPY-KLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  61   VTLAQAREARDQARKVLAGGDDPGQLKRDAKMTSAVHQANTFEAVARVWWEHWRDGKSER  120
            VTLA+ARE R +ARK+LA+G+DPG+ K++ K++  +   NTFEAVAR    +W++ K++R
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAR----EWHQTKADR  114

Query  121  -HAAY---AIKRLEADAFPVLGARPIANITAKDLTRMAKAVQDRGAIDLAHRVLQMAGQV  176
                Y    I  +E D FP +G RPIA+I + +L    + ++ RGA++  ++V Q  G+V
Sbjct  115  WSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEV  174

Query  177  MRYAVAHDLIERNPATDVKPSDTLRSRRKENYARLGEKELPELLRKIEAYQGGPYTRLAM  236
             RYA+  +  + NPA D+  + +L + +K +++ L  +ELP++L  + +Y G+  T+ A 
Sbjct  175  FRYAIVTGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTAT  232

Query  237  QLMALTFVRTTELIAARWAEFDLQAAEWRIPPERMKMKTPHIVPLSPQAVEVLKVLHTLS  296
            Q++ LT VRT EL  A+W ++D++A  W IP+E MKMK PHIVP S Q + ++K L+ +S
Sbjct  233  QIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPIS  292

Query  297  GGRALLFPGERDHDKPMSNNTILKALERMGYKGRMTGHGFRGMASTILHEQGYAHHAIEL  356
              ++L+F G  D  KP+S+++I + +E +GYKGR+TGHGFR   STILHEQG+    IE+
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  357  QLAHQERNEVSAAYNHALYLKERRVMMCDW-ANHLDKL  393
            QLAH ++N + ++YNHA YL  RR MM +W A+ +D L
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMM-QWYADYIDSL  389

358) intB in NC_010554


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  278 bits (1042),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 186/407 (46%), Positives = 286/407 (71%), Gaps = 24/407 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALTD KV++AKP +++YKL+DG+GM L++++NGSKYWR++YRF+GK+KML++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaearekrdaarkLIANGFDPSekrkevkeeqqkeF-NTFEKVARDWHATN-QRWSEGHS  118
            LA+AREKR  ARK++A G DP+E +KE K   Q  + NTFE VAR+WH T+ +RWS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  HRVLKSLEDNIFVAIGKRNIAELKTRDLLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQ  178
            + ++ ++E +IF  IGKR IAE+K  +LLE+++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLERIDDYKGRPltklavkltllvFI  238
            +G  DYNPA D+A+A+AT K+VH + L  + LP+FL  + +Y G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQI  298
            R+ ELRFA+W++IDFE  +W IPAE              KM+  H+VP S Q I ++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIEERRLMVQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ ++ RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

359) NH8B_1979 in NC_016002


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 177/389 (46%), Positives = 263/389 (68%), Gaps = 3/389 (0%)

Query  1    MPLSDVKIRTSKPLDKPYKLQDGKGLYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYPDV  60
            M+L+DVK++T+KP ++PYKL DG G+YL I + G+K+WR +Y+ +  K+ + +IG YPDV
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFA-GKEKMLSIGVYPDV  59

Query  61   SraearaerervrllvKEGKNPTAEKKLDKLRSQKETATTLAVVAEEWKVVNWPHWSETY  120
            + A+AR  R   R ++  G +P   KK +K+  Q     T+  VA EW   +  +WS  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  121  RKQVEKHLQRDLLDEYGELPIREVTSAQLLAAIRKIDERGAPSIARLVRQWAGSIFRHAI  180
            R ++   +++D++   G  PI E+ + +LL A+RK++ RGA    R VRQ+ G +FR AI
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  181  ATLRADSDPTYPLRGALRMPPTRHNAHLSADELPGFMKALDAYKGFGLTRLAVNLQMLTL  240
             T RAD +P+  L +AL  P   H + L+A+ELP F+  L +Y G  +T+ A ++ MLT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRTQELRLAEWTEFDLDAAEWRIPAEKMKMRDPHIVPLPKQAVAIMRELEPLTGRRRWVF  300
            VRTQELR+A+W ++D++A  W IPAE MKM+ PHIVP + Q +A+ ++LEP++ ++  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  301  PNIRNHDTGMTNTTILRVIEILGYKGRATGHGFRATASTILHEQGWNSDIIERQLAHLER  360
                +    +++ +I +VIE+LGYKGR TGHGFR T STILHEQG NS  IE QLAH+++
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  361  NKVKAAYNHAGYLKERREMLQAW-ADYLD  388
            N ++++YNHA YL  RREM+Q W ADY+D
Sbjct  360  NSIRGTYNHAQYLDGRREMMQ-WYADYID  387

360) intB in NC_009348


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  278 bits (1039),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 174/390 (45%), Positives = 270/390 (70%), Gaps = 3/390 (0%)

Query  1    MPLTDITARQAKWSGKPNGDKLADEKGLFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPE  59
            M+LTD+  + AK   +P   KLAD  G++LL+N +G KYW++KYR +GKEK L++GVYP+
Sbjct  1    MALTDVKVKTAKPKERPY--KLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  60   VSLrearakrdearrVIAEGIDPGLVRKQSKVASRLVSENSLEVLAREWHQSQFALWSPG  119
            V+L +AR KR EAR+++A G DPG  +K+ K+A ++   N++E +AREWHQ++   WS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  120  HATRVIESLEVDVFPDLGLVPITELTAPMILEALRKVEKRGATETAGRILQRVSAIMRYA  179
                +I+++E D+FP +G  PI+E+ +  +LEALRK+EKRGA E   ++ QR + + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  180  IQTGRASYNPAQDLRGALKATKQEHRPALPRSELPEFFRRLEAEPLNPATRLALHLLMLT  239
            I TGRA YNPA DL +AL + K+ H P L  +ELP+F+  L +   +  T+ A +++MLT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  240  MTRPGEVRFARWDEFDMERAEWRIPAARMKMRTEHLVPLSRQALAVLDELHQLTGHCELL  299
              R  E+RFA+W+++D E   W IPA  MKM+  H+VP S Q +A++ +L+ ++ H  L+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  300  FPSERKLTNPMSENTLSYAMGRMGYKGIATPHGFRALASTTLNEEGFDPDVIERQLAHAE  359
            F +     +P+S ++++  +  +GYKG  T HGFR   ST L+E+GF++  IE QLAH +
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  360  RNKVRAAYHRAEYLDDRRKLLQWLADFYDS  389
            +N +R++Y++A+YLD+RR ++QW AD+ DS
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDS  388

361) MU9_135 in NC_020418


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  278 bits (1039),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 186/407 (46%), Positives = 285/407 (71%), Gaps = 24/407 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALTD KV++AKP +++YKL+DG+GM L++++NGSKYWR++YRF+GK+KML++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaearekrdaarkLIANGFDPSekrkevkeeqqkeF-NTFEKVARDWHATN-KKWSEGHS  118
            LA+AREKR  ARK++A G DP+E +KE K   Q  + NTFE VAR+WH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  HRVLKSLEDNIFTAIGKRNIAELKTRDLLEPIKAVEMSGRLEVAARLQQRVTAIMRYAVQ  178
            + ++ ++E +IF  IGKR IAE+K  +LLE+++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLQRIDDYKGRPltklavkltllvFI  238
            +G  DYNPA D+A+A+AT K+VH + L  + LP+FL  + +Y G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTTHLVPLSRQAIEILKQI  298
            R+ ELRFA+W++IDFE  +W IPAE              KM+  H+VP S Q I ++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIDERRLMVQWWADYLDA  402
              W    +E Q++H ++NS+R++Y H A+ +D RR M+QW ADY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

362) LHK_01566 in NC_012559


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  277 bits (1037),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 172/388 (45%), Positives = 259/388 (67%), Gaps = 3/388 (0%)

Query  2    LSDTKVRQAKPQEKVYRIADARGLAIEIRPTGQKIWRYRFRLDGKANMFTIGEYPSVSLS  61
            L+D KV+ AKP+E+ Y++AD+ G+ + I + G K WR ++R+ GK +M++IG YP V+L+
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARKKLEEARELVFKGINPNTAKKTDIASRIEENANTFRVVADDWIQTNT-HWSDTYRKQ  120
            +AR K  EAR ++  G +P  AKK +  +      NTF  VA +W QT++ +WS  YR +
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  121  VRKTLEVDIFPCFGDLPIREISSAQVLAMLNGIIKRNAPLVARNARQWAGAVFRHGITTL  180
            +  T+E DIFP +G  PI EI + ++L  L  + KR A    R+ RQ+ G VFR +I T 
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  181  RCETDPTQPLNGVIKVGKVNHHRPLKPETLPGFLKALYAYKGYGIAKPAAQLMMLTFVRT  240
            R + +P+  L + +   K  H   L ++ LP FL  L +Y G  I+K A+Q++MLT VRT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  241  IEIRRAEWSDIDLENGVWRIPPEKMKMRTEHIVPLSRQSIAILRELQSLTGHRLYVFPNT  300
             E+R A+W DID+E  +W IP+E MKM+  HIVP S Q IA++++L++++ H+  VF   
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGR  302

Query  301  RRPHEAITATTINRVIEYMGYKGIVSGHGFRSTASTILHELGYPEKVIELQLAHMERNKV  360
              P+ +I+  +IN+VIE +GYKG ++GHGFR T STILHE G+    IE+QLAH+++N +
Sbjct  303  NDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSI  362

Query  361  KAAYNHAQHMEERRKMMQDW-ADYLDAL  387
            +++YNHAQ ++ RR MMQ W ADY+D+L
Sbjct  363  RGTYNHAQYLDGRREMMQ-WYADYIDSL  389

363) intB in NC_017390


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  277 bits (1038),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 275/407 (68%), Gaps = 25/407 (6%)

Query  1    MALTDIKIRNTKPSGKAVKLTDGFGMYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVS  60
            MALTD+K++ +KP  ++ KL+DG GMYLLI++NGSKYWRM+YRF+GK+K L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSDARQRRDEAKKLLAKGTDPVVKKQDDKRENSGTF--SFESVARQWHAGN-KKWSEEYK  117
            L+DAR++R EA+K+LA G DP   K+++K     ++  +FE+VAR+WH  +  +WS  Y+
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  GKILRTLETYLFPVIGNRHIAELKTRDLLVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVL  177
            + I+ T+E  +FP IG+R IAE+K  +LL +++ +E +G  E   +++QR   + RYA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  QGILDYNPAQEMSGAITTGKRAHRPALPFERYHEFLERIDSYrkrlltrlavkltlltFI  237
             G  DYNPA ++++A++T K+ H P L  +   +FL  + +Y   ++T+ A ++ +LT +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFKKSLWTIPGEREALPGIKNAHRGAKMKTPHLVPLSRQAIAILREI  297
            R+ ELRFA+W +IDF   LW IP+E              KMK PH+VP S Q IA+++++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QEISGDHNFIFIGDHYADKPMSENTVNKALRTMGYDTQKDVCGHGFRTMACSSLIESG--  355
            + IS +H ++FIG + + KP+S +++N+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -KWSKDAVERQMSHQELNNVRAAYTHQAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H + N++R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

364) EpC_14570 in NC_012214


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  277 bits (1038),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 275/407 (68%), Gaps = 25/407 (6%)

Query  1    MALTDIKIRNTKPSGKAVKLTDGFGMYLLIHPNGSKYWRMQYRFGGKQKTLALGVYPAVS  60
            MALTD+K++ +KP  ++ KL+DG GMYLLI++NGSKYWRM+YRF+GK+K L++GVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSDARQRRDEAKKLLAKGTDPVVKKQDDKRENSGTF--SFESVARQWHAGN-KKWSEEYK  117
            L+DAR++R EA+K+LA G DP   K+++K     ++  +FE+VAR+WH  +  +WS  Y+
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  GKILRTLETYLFPVIGNRHIAELKTRDLLVPIKAVEDKGFNEVAMRLQQRTTAIMRYAVL  177
            + I+ T+E  +FP IG+R IAE+K  +LL +++ +E +G  E   +++QR   + RYA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  QGILDYNPAQEMSGAITTGKRAHRPALPFERYHEFLERIDSYrkrlltrlavkltlltFI  237
             G  DYNPA ++++A++T K+ H P L  +   +FL  + +Y   ++T+ A ++ +LT +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFKKSLWTIPGEREALPGIKNAHRGAKMKTPHLVPLSRQAIAILREI  297
            R+ ELRFA+W +IDF   LW IP+E              KMK PH+VP S Q IA+++++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QEISGDHNFIFIGDHYADKPMSENTVNKALRTMGYDTQKDVCGHGFRTMACSSLIESG--  355
            + IS +H ++FIG + + KP+S +++N+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -KWSKDAVERQMSHQELNNVRAAYTHQAEHLDERRLMLQWWADFLDA  401
              W    +E Q++H + N++R++Y H A+ LD RR M+QW AD++D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

365) intB in NC_011748


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  277 bits (1038),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 157/382 (42%), Positives = 259/382 (68%), Gaps = 25/382 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWATELSLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFCGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLDA  376
            H A+ L+ RR M+QW AD++D+
Sbjct  368  H-AQYLDGRREMMQWYADYIDS  388

366) SMD_1781 in NC_017671


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  277 bits (1037),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 169/393 (44%), Positives = 264/393 (68%), Gaps = 7/393 (1%)

Query  7    PLTDTAIRKAKPGPKPTKLRDGGGLYVQLNPDGSRWWRWDYRRPVTGKRNTLSLGTYPEV  66
            +LTD  ++ AKP  +P KL DGGG+Y+ +N++GS+ WR  YR   +GK + LS+G YP+V
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPDV  59

Query  67   SLADARGRQAEARRLLASGIDPGEHRkaakvagvekaaNSFEVVTREWLGK--QKWVESY  124
            +LADAR +++EAR++LA+G DPGE +K  K+A      N+FE V+REW     ++W   Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  125  RCKVVAWMDNDVFPWIGGRPVAELAAPDFLRVARRIEERGAIESAHRIMQNCGQVMRYAV  184
            R  ++   ++D+FP IG RP+AE+ + ++L   R++E RGA+E  +++ Q CG+V RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  185  ATGRADRNPVADLRGALAPPMERHHAAITDPRELGGLLRAIDGYAGDASTRAALRLAPLV  244
             TGRAD NP +DL +ALA P   H + +T + EL  +L  + GY+G   T++A ++  L 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  245  FVRPGELRHAEWSEIDFDAGEWNIPAHKMKMREPHLVPLSSQAVAILRDLQPLTGHRQYV  304
             VR  ELR A+W +IDF+A  W+IPA+ MKM+ PH+VP S Q +A++++L+P++ H+  V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  305  FPGGRSPKRPLSDNALTAALRRMGFDKETMTAHGFRATARTLLDEVLGWRPDLIEHQLAH  364
            F G   P++P+S +++   +  +G+ K  +T+HGFR T  T+L+E  G  +  IE QLAH
Sbjct  299  FIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  365  AVRDPNGRAYNRTSHLPERRKMMQAWADYLDAL  397
              +++   +YN++  L  RR MMQ  ADY+D+L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

367) LHK_01737 in NC_012559


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  276 bits (1032),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 174/422 (42%), Positives = 271/422 (65%), Gaps = 32/422 (7%)

Query  6    PLTQLAIKNLKPQDKPYKKSDGGGLYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFAL  65
            +LT++ +K  KP+++PYK +DGGG+YLLIN+NGSKYWRM+YR+ GK+K L+IGVY + +L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  66   VDDKGKARAEQVIMSLADARLHCDAARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAR  125
             D + K R+E               AR +LA G DP E+K+E K A +     +F  VAR
Sbjct  62   ADAREK-RSE---------------ARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAR  105

Query  126  EWHAKMANKWVPSHAANVLGRLERYIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTS  185
            EWH   A++W      ++++ +E+ IFP IG  P+AEI+  ++L ALRK+E +  L+   
Sbjct  106  EWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMR  165

Query  186  RLRQYLKQIGRYAVQTGRIDFNPGNDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLR  245
            ++RQ   ++ RYA+ TGR D+NP+ DL +AL T + VH P L+ N LP++L  + +    
Sbjct  166  KVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGS  225

Query  246  PLTRAAISLTLLTFVRSSELRFARWEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPH  305
             +T++A  + +LT VR+ ELRFA+WE+IDF+  +W IP+E              KM+ PH
Sbjct  226  IITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPH  273

Query  306  LVPLCQQALALFREVHAITGRFELVFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHG  365
            +VP  +Q +ALF+++++I+ +  LVF G +DP KP+S  ++N  +  +GY  K  + GHG
Sbjct  274  IVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHG  331

Query  366  FRAMACSALSESGQFSIEAIERQMSHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQ  425
            FR    + L E G F+   IE Q++H +++S+R++Y H A++L  RR+MM W AD++D+ 
Sbjct  332  FRHTMSTILHEQG-FNSAWIEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

Query  426  RE  427
             E
Sbjct  390  SE  391

368) PC1_0871 in NC_012917


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 169/407 (42%), Positives = 270/407 (67%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LASARKLREEARTILSVGDDPGVKKQHDKQAKKNG--NTFEAIARQWVAANI-RWSEAHA  117
            LA AR  R EAR IL+ G+DPG  K+++K A + +  NTFEA+AR+W  ++  RWS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  AKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETATRIQQRTTVIMRYAVQ  177
              ++ ++E ++FP IG+  ++++K  +LL +LR  EK+G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  EGLIASNPANDLCGAITPPPKNHYpalpleklpelleRIEGYSGRLLTRLAVQLNLLIFI  237
             G    NPA DL +A++ P K H+P L  + LP++L  + GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWTEIDLDNAMWTLPAQREPIAGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID++  +W +PA+              KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNGELLFPGDHDARKPMSENTINKALRTMGYDTQVDICGHGFRTIACSALIESG--  355
              +S +  L+F G +D+RKP+S ++IN+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A+ LD R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

369) Dret_1610 in NC_013223


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  276 bits (1031),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 158/394 (41%), Positives = 268/394 (69%), Gaps = 7/394 (1%)

Query  1    MALTVKAIQAAKPREKLYRLNDERGLYLEIPPKGAYRWRFRYRFHGKPKMVSLGRYPDIS  60
            MALT   +++AKP+E+ Y+L D  G+YL I ++G+  WR +YRF GK KM+S+G YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKQAREKRDEMRALVASSIDPSNYLRQAR---HAAKDDSFEAVAREWHKKFKSRWTEGHA  117
            L +AREKR E R ++A++ DP++  ++ +   + +  ++FEAVAREWH+    RW+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  ATVLTRLEQNAFPWIGSQPIDSVTPLDILPLLRRIEDRGAIELAHRVRGIISQVFRFAVA  177
              ++  +E++ FP IG +PI  + P+++L  LR++E RGA+E  ++VR   ++VFR+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  NERASRDPASDLRDALTPRQENHFAAITNPSEIPALLGAISEYQGHFVTRCALRLASLVF  237
              RA  +PA+DL  AL+  +  HF+ +T ++E+P +L  ++ Y G ++T+ A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  238  VRPGELRKAEWDEIDLAHQEWRLPPAKTKLRKTHIIPLAHQACAIFNEIHPLTGTGRYVF  297
            VR  ELR A+W++ID+  + W +P+   K+++ HI+P ++Q  A+F++++P++     VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  298  PSARDKNKPMSENTINAALRQLGFSKEKMTAHGFRSMASTRLNELGWHPDAIERQLGHTE  357
             +  D  KP+S ++IN  +  LG+ K ++T+HGFR   ST L+E G ++  IE QL+H +
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  358  KNGVRAAYNHAEYLEERRKMMQAW-ADYLDKLTN  390
            KN++R++YNHA+YL+ RR MMQ W ADY+D L++
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

370) Selin_1494 in NC_014836


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 163/392 (42%), Positives = 264/392 (68%), Gaps = 1/392 (0%)

Query  7    PLTVKQIDSAKPKDKQYRLYDGGGLVFTIKPNGGKYWIMRYRYEKKSHELHLGTYPEVPL  66
            +LT  ++ +AKPK++ Y+L DGGG+ + I++NG+KYW M+YR+  K   L +G YP+V L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  67   SKAREFREEVRVQVAAGIDPKRYREEAENQLLRQKEGSFESVARSWCEIQKPRWTERHGS  126
            + ARE R E R  +AAG DP   + E    L      +FE+VAR W + +  RW+ R   
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  127  DVINSLETNVFPYIGSRPIYELKPRELLDVVKVIDDRGASEIARRVLQRISAIYDYAFAH  186
            ++I+++E ++FPYIG RPI E+KP ELL+ ++ ++ RGA E  R+V QR + ++ YA+  
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  187  GLVELNPTAGLVKGLKPQKKQNFAALSAEEVPELVRAIEGYHGHPItklalklclltaSR  246
            G  + NP+++L  +L   KK +F+ L+A+E+P+++  + GY G  ITK A ++ +LT+ R
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  247  TNEIRFASWQEFDLDNTLWCIPAERMKMRRDHRVPLSRQAVAVVEELIQYSGKNKYLFPN  306
            T+E+RFA W+++D++  LW IPAE MKM+R H VP S Q +A+  +L   S  +  +F  
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  307  QNKPHTPITENTMLYALYRMGFHKRSTVHGFRTLFSTIANEKSDFSADAVERQLAHQEQN  366
            +N P+ PI+ +++   +  +G+  R T HGFR   STI +E++ F++  +E QLAH ++N
Sbjct  302  RNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKN  360

Query  367  RIRAAYHRADYLDERRELMQWWADYLDGQNNI  398
             IR++Y++A+YLD RRE+MQW ADY+D+ +++
Sbjct  361  SIRGTYNHAQYLDGRREMMQWYADYIDSLSEL  392

371) plu4477 in NC_005126


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  275 bits (1030),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 170/408 (42%), Positives = 262/408 (65%), Gaps = 24/408 (5%)

Query  1    MALTDVVARTAKPREQAYKLADAHGLYLMISPGGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALTDV  +TAKP+E++YKLAD+ G+YL+I++ GSK W +KYRF GKE  +++G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREKRDEVRLLLADGINPAEKRGEGKKEAQDAL-ITFEKVARDWHRNISQNRWSETH  119
            LA AREKR E R +LA G +P+E + E K   Q +L  TFE VAR+WH+    +RWS   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  AGRVWRDMERNILPAIGHRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
             + +    E++I+P IG R IA++K  +LLE+L+ +E+ G L+   ++RQR  ++ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QNDLIERNPAQDLSGAIAPPKATHRPALKLDKLPDFLARIENYKGRTLTTLALKFTLCVF  239
              +  + NPA DL++A+A PK  H P L  + LP+FL+ +  Y G  +T  A ++ +   
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  IRSSELRFARWTEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRTEHLVPLSRQALALLKE  299
            +R+ ELRFA+W +IDF   +W IPAE              KM+  H+VP S Q +AL+K+
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  300  IQAISGGHELIFPGDRRPTKPMSENTVNNALRVMGYDTTTELCGHGFRTMACSALVESG-  358
            +++IS  H L+F G   P KP+S +++N+ + ++GY     L GHGFR    + L E G 
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERDSVRAAYIHKAEHIEERRLMLQWWADYLDA  404
               W    +E Q++H +++S+R++Y H A+ ++ RR M+QW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

372) NCGM2_0360 in NC_017549


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  275 bits (1029),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 188/395 (48%), Positives = 278/395 (71%), Gaps = 8/395 (2%)

Query  1    MPLTDSAIKTAKPKEKPYKLSDAQGLYLLVNPNGSKLWRLKYRVGGKEKGLAFGAYPTVT  60
            M+LTD  +KTAKPKE+PYKL+D+ G+YLL+N+NGSK WR+KYR +GKEK L++G YP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LqqarqrrdearqqlaqGEDPGeqkkaskqakkvs-eLTFETLAREWYAYNAPRWAESTA  119
            L +AR++R EAR+ LA G DPGE KK  K A ++S   TFE++AREW   +A RW  S  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRW--SLR  118

Query  120  YKAKLY--LENDLIPGIGSRPIAAITRPDLVDLVRKVEARGTLNAAGKIRQWLHQIYRYA  177
            Y+  +   +E+D++P IG RPIA I   +L++ +RK+E RG+L+   K+RQ+  +++RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  LAKGVVESNPATDLDVVaapakaarhhphlpFAELPELLEKLATAKLHTLTRSAIRLLML  237
            +  G  + NPA DL    A +K  +     +  ELP++L  LA      +T++A +++ML
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTGSIITKTATQIIML  237

Query  238  TAVRPGELRAAPWCEFDLDTATWTIPAARMKARRSHVVPLPRQAVTILRQLHELTGSYSL  297
            T+VR  ELR A W ++D+++  W IPA  MK +R+H+VP + Q +++++QL+ ++   +L
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  298  LFPGQQNAERPMSENTINKALRLVGYGGRQTGHGFRHLLSTELNSRGYNRDWIERQLAHG  357
            +F G++++ +P+S ++IN+ + L+GY GR TGHGFRH +ST L+ +G+N  WIE QLAH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  358  DKDEIRGTYNHATYLEQRRGMMQAW-ADSIDALCS  391
            DK+ IRGTYNHA YL+ RR MMQ W AD ID+L  
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

373) A11S_1005 in NC_020812


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  275 bits (1028),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 173/396 (44%), Positives = 270/396 (69%), Gaps = 6/396 (1%)

Query  1    MPLSDVACRQAKPREKSYKMGDSGGLYLEITPKGSKLWRMKYRYGGKEKRLALGQYPEVS  60
            M+L+DV  + AKP+E++YK++D+GG+YL I ++GSK WRMKYR++GKEK L++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARDGRDKARKLLAEHNDPSLAKQEKKRLAQASAANTFEALALEWHEKNKGNWSPNHA  120
            LADAR+ R  ARK+LA   DP+ AK+E K   Q S  NTFEA+A EWH+ + + WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  STVLRRLEQDLFPAIGNLPIKEITTPRLAIVIENIEKRGAYDIARRALQYSRAIFAYAQL  180
              ++  +E+D+FP IG+ PI EI    L   + ++EKRGA +  R+  Q    +F YA +
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  RGKIDTNPADIKAKDFLAPIKQGHYAAMEAKDLPEFLSKLYSNEARLFISTQLALEMMLL  240
             G+ D NPA   A  + +P K+ H++ + A++LP+FL+ L +  + ++  T  A ++++L
Sbjct  181  TGRADYNPAPDLASALATP-KKVHFPFLTANELPHFLTDLAGYTGSIITKT--ATQIIML  237

Query  241  TFVRTSELIKARWDEFDFEKRQWIIPAERMKMNRDHIVPLSKQVLRILEQLKPISEHREF  300
            T VRT EL  A+W+++DFE + W IPAE MKM+R HIVP S QV+ ++ QL PIS H+ +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  LFPGQRNPKTHMSNGAILMALKRMGYHGIHTGHGFRALAMTTIMEELGYPHEVPDTQLAH  360
            +F G+ +P+  +S+ +I   +  +GY G  TGHGFR  +M+TI++E G+     + QLAH
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRH-TMSTILHEQGFNSAWIEMQLAH  356

Query  361  AKGDSVRRAYDRTKFLAQRKKMMQEW-ADYIENISH  395
               +S+R +Y+++++L  R+ MMQ W ADYI+++S+
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

374) Ent638_2887 in NC_009436


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  275 bits (1027),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 175/407 (43%), Positives = 278/407 (69%), Gaps = 25/407 (6%)

Query  1    MALTDVKVRNAKPADKPVKLTDGNGMHLLVQPSGSKYWRLQYRFSGKQKMLALGVYPEVS  60
            MALTDVKV+ AKP ++P KL+DG GM LL++++GSKYWR++YRF+GK+KML++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSearrrreearQLIANNVDPGEKRKTKKIE-EKGL-LIFETVARDWHSSNRT-WSDSHR  117
            L++AR +R EAR+++A   DPGE +K  KI  + +L   FE+VAR+WH ++   WS   R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  KTVLSSLITHVFPVIGKRNITELKTRDLLVPLKKAEATGHLELAARLQQRITAIMRYAVH  177
              ++ ++  ++FP IGKR I+E+K  +LL +L+K E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  NALVDQNPAYDLTGAVTTAKSNHRPAlpleqlpellKRIGTYKGKGITQIAVQLTLLTFI  237
             +  D NPA DL++A++T+K  H P L  ++LP++L  ++ Y G  IT+ A Q+ +LT +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEVNFKNSLWTIPAERQVLDGVKYSGRGSKMKTPHLVPLSKQAVVLLKKL  297
            R+ ELRFA+W +++F   LW IPAE  V+          KMK PH+VP S Q + L+K+L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE--VM----------KMKRPHIVPPSEQVIALFKQL  288

Query  298  HAISGENELMFVGFSRDDKPISENTVNKALRTMGYDTKKDVCGHGFRTMACSALIESGL-  356
            ++IS ++ L+F+G +   KPIS +++N+ +  +GY  +  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  357  --WSRDAVEKQMSHQERNSVRAAYIHKAEHLEERKLMLQWWANYLDT  401
              W    +E Q++H ++NS+R++Y H A+ L+ R+ M+QW A+Y+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

375) AMBLS11_09695 in NC_018692


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  274 bits (1024),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 161/396 (41%), Positives = 268/396 (68%), Gaps = 11/396 (2%)

Query  1    MPLTDRAIKAIKPADKDQWVSDKDGLRLLVKSNGNKFWRLKYRFAGKQKTLALGSYPETP  60
            M+LTD  +K+ KP ++   ++D +G+ LL+++NG+K+WR+KYRFAGK+K L++G YP+  
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSKARELTMQARLTVKSGVDPAAEKR-EKVREEQRLNEDLFMNVAMEWWEQQSGGWTENH  119
            L+ ARE   +AR  + +G DP+  K+ EK+  +  L++  F  VA EW + +++ W+   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNT-FEAVAREWHQTKADRWSLRY  119

Query  120  ARRVWLRLKDNSFTALGKRPISTIRPRDVIETVREIEKRGALDVAQRVLQDIGRVCRYAV  179
               +   +  + F  +GKRPI+ I+P +++E++R +EKRGAL+  ++V Q  G V RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QTERINFNPASELSDVLKSRKVEHRASLPREQLPAFVKALSTYEEKGRLLTKYAIQLLVL  239
             T R ++NPA++L+  L + K  H + L  ++LP F+  L+ Y   G ++TK A Q+++L
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGY--TGSIITKTATQIIML  237

Query  240  TFVRPGELRGARWEEFNFDDNIWRIPADRMKMRSEHIVPLSQQALQVIELIKPITQQYQL  299
            T VR  ELR A+WE+++F+ ++W IPA+ MKM+  HIVP S+Q + ++  + PI+++  L
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  300  LFPSERDRNDPMSDNTMRRAIFKLGYDGTKPGKAKANPHGFRATASSILNEQGFNPDAIE  359
            +F +  D   P+S +++ + I  LGY      K++   HGFR T S+IL+EQGFN+  IE
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY------KGRLTGHGFRHTMSTILHEQGFNSAWIE  351

Query  360  RQLSHMERNGVRAAYTHHARYLDERKEMMQWWADYV  395
             QL+H+++N++R++Y +HA+YLD R+EMMQW ADY+
Sbjct  352  MQLAHVDKNSIRGTY-NHAQYLDGRREMMQWYADYI  386

376) MU9_117 in NC_020418


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  273 bits (1020),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 182/405 (45%), Positives = 284/405 (71%), Gaps = 24/405 (5%)

Query  1    MALTDAKVRAAKPLDKSYKLTDGDGMHLMVHTNGSKYWRLQYRFGGKQKMLALGVYPDIS  60
            MALTD KV++AKP +++YKL+DG+GM L++++NGSKYWR++YRF+GK+KML++GVYPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaearekrdaarkLIANGFDPSekrkevkeeqqkeF-NTFEKVARDWHATN-KKWSEGHS  118
            LA+AREKR  ARK++A G DP+E +KE K   Q  + NTFE VAR+WH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  HRVLKSLEDNIFAAIDKRNIAELKTRDLLEPIKAVEMSGRLGVAARLQQRVTGIMRYAVQ  178
            + ++ ++E +IF+ I+KR IAE+K  +LLE+++ +E  G L    +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLQRIDDYKGRPltklavkltllvFI  238
            +G  DYNPA D+A+A+AT K+VH + L  + LP+FL  + +Y G  +TK A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGSKMRTPHLVPLSRQAIEILKQI  298
            R+ ELRFA+W++IDFE  +W IPAE              KM+ PH+VP S Q I ++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  YQFSGNHELIFIGDHNPRKPMSENTVNNALRVMGYDTKTEVCGHGFRTMACSSLIESGL-  357
              +S +H L+FIG ++PRKP+S +++N+ + ++GY  K  + GHGFR    + L E G+ 
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQGFN  346

Query  358  --WSKDAVERQMSHQERNSVRAAYIHKAEHIEERRLMVQWWADFL  400
              W    +E Q++H ++NS+R++Y H A+ ++ RR M+QW AD++
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYI  386

377) SEEB0189_19950 in NC_021844


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  273 bits (1022),  Expect = 1e-74, Method: Compositional matrix adjust.
 Identities = 175/409 (43%), Positives = 265/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHESN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH+++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDTSGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

378) Pcar_1823 in NC_007498


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  273 bits (1023),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 168/400 (42%), Positives = 261/400 (66%), Gaps = 13/400 (3%)

Query  7    PLSATKVKKAKPAEKQYTLFDGQGLFLLVTPTGSKLWRFKYRLNGKPKLMSFGAYPEVSL  66
            +L+  KVK AKP E+ Y L DG G++LL+ + GSK WR KYR+ GK K++S+G YP+V+L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  67   EQAREKRTAARKQVANGIDPCVVRRAVKES-QAAGEGSFEVVAREWHQKFSSTWSESHAK  125
             +AREKR+ ARK +A G DP   ++  K + Q +   +FE VAREWHQ  +  WS     
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  126  TQLGRMERDLFPWLGDRPIVEITSPELLAVLRRIESRGALETAHRVKTICGQIFRYAIAT  185
              ++  E+D+FP +G RPI EI + ELL  LR++E RGALE  ++V+  CG++FRYAI T
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  186  GRAERDPAADLKGALPPVQATHHAAMTKPGDLADLLRTIDAYEGSHVVRCALRFAPLVFV  245
            GRA+ +PA+DL +AL+  +  H + +T + +L+++L  + +Y GS + + A ++  L  V
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  246  RPGELRQAEWSEFDLDAGEWNIPVERMKLPKKTKIRRAGEAHLVPLSKQAVEILRDLQPL  305
            R  ELR A+W ++D++A  W+IP E MK+ +         +H+VP S Q + ++++L+P+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKR---------PHIVPPSEQVIALFKQLEPI  291

Query  306  TGDGLYVFPSVRSAGRPMSDNTINAALRRLGYSKDEATGHGFRATARTILDEVLQVRPDL  365
            + +   VF +   + +P+S ++IN  +  LGY K+  TGHGFR T  TIL+E     +  
Sbjct  292  SKHHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAW  349

Query  366  IEHQLAHSVRDPLGRAYNRTSFLPERREMMQLWADYLDGL  405
            IE QLAH  ++++  +YN++ +L  RREMMQ  ADY+D+L
Sbjct  350  IEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

379) Bamb_2421 in NC_008390


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 174/393 (45%), Positives = 271/393 (69%), Gaps = 6/393 (1%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVT  60
            M+LTD++V+ AK+   PYKL+DG GM+LL+++NG+KYWR+ YRF GK+K L++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdakraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KR EAR  +AAG DPGEAKK+ K A +++  N+FEAVAREW +++   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVLNSLEVDVFPKIGARPMAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
            + +++++E D+FP IG RP+AEI + ++L  +R +E RG  E  +++ QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR   NPA+D+ +       P   H + + A E+P+++ D+ +Y G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T VRT E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++ QL +++ +H +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYTLYHMGYKSRMTGHGFRGPTATALRELGFGRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E GF    +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERRRMMQVW-GDHLDRL  391
            ++N + ++Y HA+YL  RR MMQ W +D +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

380) Cpha266_1627 in NC_008639


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1019),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 172/395 (44%), Positives = 263/395 (67%), Gaps = 9/395 (2%)

Query  6    LPLSDAQVSKAKPAEKDYKLSDGGGLHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEIS  65
            ++L+D +V  AKP E+ YKL+DGGG+ LL+ ++G+K WR +YRF GK+K+L++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  66   LANARKRREEARTLLANEQDPSeakkaakkaealkDASSFELVAREWFGKNDPVWSPGHA  125
            LA+AR +R EAR +LA   DP+EAKK  K A  +   ++FE VAREW   +   WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  126  LTVMCRLEKDVFPAIGSKPVSEITASDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVA  185
              ++  +EKD+FP IG +P++EI + ++   L K+E RGA+E   +++  CG+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  186  TGRLEHDPSAALKSREIFRKREIRHHAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPL  245
            TGR + +P++ L S     K+    H ++  ++EL+ +L  +  Y G+++ K+A Q+  L
Sbjct  181  TGRADYNPAPDLASALATPKKV---HFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  246  LFVRPGELQNMEWSDIDFEEALWSIPAERMKMRQPHLVPLSRQSLSILQGLHPATGHGRY  305
              VR  EL+  +W DIDFE  LW IPAE MKM++PH+VP S Q +++++ L+P + H   
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  306  VFTGRGS--RPMSNNSINAALRYLGYDSDTVTGHGFRATARTILDEVLGFRVDLIEHQLA  363
            VF GR    +P+S++SIN  +  LGY +  +TGHGFR T  TIL+E  GF    IE QLA
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  364  HAVRDPNGRAYNRTSFLDDRRQMMQAW-ADYLYSL  397
            H  +++   +YN++ +LD+RR+MMQ W ADY+ SL
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

381) ECOK1_4788 in NC_017628


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 176/408 (44%), Positives = 264/408 (65%), Gaps = 27/408 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKVVQKEARA--ENSGAYTFEAIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFEA+AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLN  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L++
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWADYLD  402
            +   W    IE QL+H ++N++R++Y H ++ LD RR MMQW ADY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

382) SNSL254_A4836 in NC_011080


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 175/410 (43%), Positives = 265/410 (65%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAVMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   V RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSLQAMALLE  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q +AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGYDTKTDVCGHGFRTMARGALGESG  357
            QL  +S +  L+F G +DP K +S +++N  +  +GY  +  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDEI  404
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

383) SN31241_8570 in NC_021902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 175/410 (43%), Positives = 265/410 (65%), Gaps = 27/410 (6%)

Query  5    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  64
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  65   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  121
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  122  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAVMRYA  181
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   V RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  182  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  241
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  242  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSLQAMALLE  301
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q +AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  302  QLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGYDTKTDVCGHGFRTMARGALGESG  361
            QL  +S +  L+F G +DP K +S +++N  +  +GY  +  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  362  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDEI  408
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

384) intB in NC_012971


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R E+RK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

385) intB in NC_012892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R E+RK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

386) ECBD_3766 in NC_012947


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R E+RK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

387) intB in NC_012967


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R E+RK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

388) EcDH1_3727 in NC_017625


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

389) intB in NC_017638


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

390) ETEC_4611 in NC_017633


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 257/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EAR++LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

391) intB in NC_011750


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 257/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EAR++LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

392) intB in NC_010473


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

393) intB in NC_007779


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

394) intB in NC_017663


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 155/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDETRKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R E+RK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

395) intB in NC_011751


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1018),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 156/381 (41%), Positives = 256/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARK+LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++LT + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMARNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+ +NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

396) Bcen_1752 in NC_008060


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 174/393 (45%), Positives = 271/393 (69%), Gaps = 6/393 (1%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT  60
            M+LTD++V+ AK+   PYKL+DG GM+LL+++NG+KYWR+ YRF GK+K L++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdarraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KR EAR  +AAG DPGEAKK+ + A +++  N+FEAVAREW +++   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
            + +++++E D+FP IG RPIAEI + ++L  +R +E RG  E  +++ QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR   NPA+D+ +       P   H + + A E+P+++ D+ +Y G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T VRT E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++ QL +++ +H +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E GF    +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERRRMMQAW-GDHLDQL  391
            ++N + ++Y HA+YL  RR MMQ W +D +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

397) Bcen2424_2364 in NC_008542


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 174/393 (45%), Positives = 271/393 (69%), Gaps = 6/393 (1%)

Query  1    MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT  60
            M+LTD++V+ AK+   PYKL+DG GM+LL+++NG+KYWR+ YRF GK+K L++GVYP VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKKRDEAREQIAAGIDPGEakkdarraaeiaaansfeavaREWFDSQRPGWSDGYA  120
            LA AR KR EAR  +AAG DPGEAKK+ + A +++  N+FEAVAREW +++   WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM  180
            + +++++E D+FP IG RPIAEI + ++L  +R +E RG  E  +++ QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL  240
            TGR   NPA+D+ +       P   H + + A E+P+++ D+ +Y G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF  300
            T VRT E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++ QL +++ +H +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E GF    +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERRRMMQAW-GDHLDQL  391
            ++N + ++Y HA+YL  RR MMQ W +D +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

398) GBP346_A3075 in NC_012695


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 169/399 (43%), Positives = 266/399 (67%), Gaps = 10/399 (2%)

Query  1    MALTDMAIRRAKPMEKQQKLFDSGGLFLLVTPAGGKRWVLKYRFGGREKSLAFGTYPEVS  60
            MALTD+ ++ AKP E+  KL D+GG++LL+ + G+K W +KYRF+G+EK L++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LVEARKKRDAAREKLAANIDPGEAKKAEKRTQRLNAENSFEAIAREWHAKYAPTWSDSHG  120
            L +AR KR  AR  LAA  DPGEAKK EK + +++  N+FEA+AREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  NRILRRLEVDAFPWIGGKPMANLTPPDVLDILRRVEKRGALETAHRLRGNVGQVCRYAVA  180
            + I+  +E D FP IG +P+A++ P ++L+ LR++EKRGALE  +++R   G+V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDVTSDLRGALPPPETEHFAAVTAPKELGELLRAIDSYRGTFPVLCALRLAPLVF  240
            TGRA+ + ++DL +AL+ P   HF+ +TA +EL ++L  + +Y G++    A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  QRPGELRAAEWEEFDLDAATWEIPSARMKRRKKDKASGGAHIVPLASQAISVLRELHLLT  300
             R  ELR A+WE++D++A  WEIP+  MK ++       +HIVP + Q I+++++L+ ++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-------PHIVPPSEQVIALFKQLEPIS  292

Query  301  GNGRYLFSGARSKTRPMSDNTVNAALRRLGYDSSTMTGHGFRATARTIMAEQLGIPKEII  360
             +   +F G     +P+S +++N  +  LGY +  +TGHGFR T  TI+ EQ G+    I
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGYKGR-LTGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYDRTVYLAQRGEMMQKWANYLDRL  399
            E QLAH  K+++  +Y+++ YL  R EMMQ  A+Y+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

399) ENC_43890 in NC_021046


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1017),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 173/413 (42%), Positives = 264/413 (64%), Gaps = 27/413 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGEYTFETIGREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE+++REWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKKLLFPGDHDTTKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D  K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHTERNNVRAAYIHTSEHLDERRLMVQWWADYLDVNRDL  407
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D   +L
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSEL  392

400) intB in NC_011745


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 154/381 (41%), Positives = 257/381 (68%), Gaps = 25/381 (6%)

Query  1    MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKK  60
            M LL+++NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EAR++LA G DPG+ K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT  117
            K++K+    +   TF  VA EWH T+  +WS    + ++ ++E ++F+ +G R IAE+K 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  118  RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP  177
             +LL +++ +E  G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A+ ++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  178  ALELKRIPELLAKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE  237
             L  + +P++L+ + +YTG  +T+ A ++ +L  +R+ ELRFA+W +IDFEA +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  238  REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT  297
                          KM+  H+VP S Q +A++KQ+  +   H L+FIG +D++KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  298  VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL---WSRDAVERQMSHMERNSVRAAYI  354
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  355  HKAEHLEERRLMLQWWADFLD  375
            H A+ L+ RR M+QW AD++D
Sbjct  368  H-AQYLDGRREMMQWYADYID  387

401) Varpa_2722 in NC_014931


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1015),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 160/385 (42%), Positives = 265/385 (69%), Gaps = 5/385 (1%)

Query  1    MALTDMAARKAKPEVRSYNLTDGAGLYLQVTPAGGKLWRWNYRHDGKQKTMAFGSYPEVS  60
            MALTD+  + AKP  R+Y+L+DG+G+YL + + G+K WR +YR  GK+K +++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   IADAREAHQAARKQKAAGADPMAQRKLDKIAGVMAREHSFKAIAQQWHDQWKPNK-AERH  119
            +ADARE +  ARK  AAG+DP   +K +KIA  M+  ++F A+A++WH+  K+++ + R 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  ARIVWGRLENDVFPAIGARPISEVKPSELVAMIKKIAGRGAPDMAKRCLEISGQVFRYAV  179
               + + +E+D+FP IG RPI+E+KP EL+  ++K+  RGA +  ++  +  G+VFRYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  AHGISERNPAADIKPGDVLPPRKTNHFARVESSELPDLLRKIEAYSGTPATRLAMKLMAY  239
              G ++ NPA+D+  +  L+  K  HF+ + ++ELP++L  + +Y+G+  T+ A +++  
Sbjct  180  VTGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  240  TFVRTGELIGARWPEFDLDAAVWRIPPERMKMKTLHIVPLSTQAVEVLRTLQLVTGDSAL  299
            T VRT EL  A+W ++D++A +W IP+E MKMK  HIVP S Q + +++ L+ ++ + +L
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  300  LFPGERDHEKSISNNTILGALKRMGYAGRMTGHGFRGVASTELHEMGFEEAHIEAQMSHL  359
            +F G  D  K+IS+++I   +  +GY GR+TGHGFR   ST LHE GF+ A IE Q++H+
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  KRNRVASAYDHSKYLKQRVAMMQTW  384
             +N + ++Y+H++YL  R  MMQ W
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQ-W  381

402) SSPA3984 in NC_011147


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1015),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 174/409 (43%), Positives = 264/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHESN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH+++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

403) int in NC_006511


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1015),  Expect = 4e-74, Method: Compositional matrix adjust.
 Identities = 174/409 (43%), Positives = 264/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHESN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH+++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKEVDTSGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLE  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNSVRAAYIHTSEHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++NS+R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

404) Pecwa_0718 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1013),  Expect = 5e-74, Method: Compositional matrix adjust.
 Identities = 170/407 (42%), Positives = 271/407 (67%), Gaps = 25/407 (6%)

Query  1    MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYRFGGKEKKLAFGAYPTVS  60
            M+LTD  ++ AKP ++PYKL+D+ G+YLLI++NGSK W++KYRF+GKEK L++G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LASARKLREEARTILSAGDDPGVKKQHDKQAKKNG--NTFEAIARQWVAANI-RWSEAHT  117
            LA AR  R EAR IL+AG+DPG  K+++K A + +  NTFEA+AR+W  ++  RWS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIMRYAVQ  177
            D ++ ++E ++FP IG+  ++++K  +LL +LR  EK+G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  EGLIASNPANDLYGAITPPPKNHYpalpleklpelleRIEGYSGRLLTRLAVQLNLLIFI  237
             G    NPA DL +A++ P K H+P L  + LP++L  + GY+G ++T+ A Q+ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWVEIDLDNAMWTLPAQREPIAGVRHSERGAKMKTPHLVPLSKQAVTVLKQL  297
            R+ ELRFA+W +ID++  +W +PA+              KMK PH+VP S Q ++++KQL
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  KLLSGNGDLLFPGDHDALKPMSENTINKALRTMGYDTQVDICGHGFRTIACSALIESG--  355
              +S +  L+F G +D+ KP+S ++IN+ +  +GY  +  + GHGFR    + L E G  
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGFN  346

Query  356  -RWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYLDA  401
              W    +E Q++H ++N +R++Y H A+ LD R +MMQW +DY+D+
Sbjct  347  SAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

405) Galf_1827 in NC_014394


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1012),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 174/402 (44%), Positives = 274/402 (69%), Gaps = 16/402 (3%)

Query  1    MALTELAVKNAKPKDKPYKLSDGGGLFLLVQINGGKYWRLAYRFADKQKTLALGIYPDIS  60
            MALT++ VK AKPK++PYKL+DGGG++LL++ NG+KYWR+ YRFA+K+K L++G+YPD++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARERREQARKLLANDTDPSAIKKETKRILQTATVNSFSALAKELHKVKAPMWTEGHA  120
            LADARE+R +ARK+LA + DP+  KKE K  LQ +  N+F A+A+E H+ KA  W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KQWMLNMEKYAFPVIGDRPVAEIEPLELVGIMRNVEAQGTFETRDRLLQTISSTFKYAIA  180
             + +   EK  FP IG RP+AEI P+EL+  +R++E +G++E   ++ Q  +  F+YAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  IGKAKYNPA-EIRLALADRPKVENFACLSTDEIPAFLRAFDDYQERGKVSLIavaafrll  239
             G+A YNPA ++  ALA   KV +F+ L+++E+P FL  + +Y      S+I+ +A +++
Sbjct  181  TGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTG----SIITKTATQII  235

Query  240  lltatrSSEVRFSKWADFDLDAGCWIIPAEQTgrkgkhgkrkPHAVPLSDQAIAVLRDLY  299
            +LT+ R+ E+RF+ W D+D++A  W IPAE          ++PH VP S+Q IA++++L 
Sbjct  236  MLTGVRTQELRFAHWEDIDFEAKLWEIPAE------VMKMKRPHIVPPSEQVIALFKQLE  289

Query  300  PVTGHGEHVFPSRNGMGRVISENTVNKIIETMGYKGRQTGHGFRSLARTTLGDMG--HRW  357
            P++ H   VF +RN+  + IS +++N++IE +GYKGR TGHGFR    T L + G    W
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAW  349

Query  358  EVLEAMLSHALENQTAAAYVRTTYFEERRGIMQKWADYLDAV  399
              +E  L+H   N   ++Y ++ Y++ RR +MQ  ADY+D++
Sbjct  350  --IEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

406) intB in NC_020409


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  271 bits (1012),  Expect = 6e-74, Method: Compositional matrix adjust.
 Identities = 164/394 (42%), Positives = 266/394 (68%), Gaps = 8/394 (2%)

Query  1    MPLTDAKIKAAKPKSKEFTLNDGEGLSLVVNPKGRKWWRFRYQINGKRTMLSLGPYPYIS  60
            M+LTD K+K+AKPK + + L DG G+ L++N++G K WR +Y++ GK  MLS+G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LQEARLKRGDLKTLIAQGHDPSRKRKEDKR--KASASEAFEAIAREWFGKQVGSGWSERH  118
            L +AR KR++ + ++A G DP+  +KE+K   + S  ++FEA+AREW   + +  WS R 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADR-WSLRY  119

Query  119  AKTTMERMKKNIFPFIGDRPISELGVEDMLGVVQRCEKRGAVETARRIRQIMSQVFRYAV  178
                ++   K+IFP+IG RPI+E+   ++L  +++ EKRGA+E  R++RQ  ++VFRYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  179  AAGRAERDPAADIKGALPPARKVKHHPSITDPKEIGPLLRAVDGFSGTLVVHCALRFAPL  238
             +GRA+ +PA+D+ +AL+ ++KV H P +T ++E+  +L  + G++G+++   A ++  L
Sbjct  180  VTGRADYNPAPDLASALATPKKV-HFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  239  VFVRPGELRNAEWGEVDLEGSEWRIPAEKMKGGSPHIVPLSTQAVEVLTELHPLTGPSGY  298
              VR  ELR A+W ++D+E+  W IPAE MK   PHIVP S Q + ++ +L+P++     
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  299  VFPSVRTSARPMSENTINVSLRRIGYDKTEMTGHGFRSMASTLLNEHGWHKDAIERQLAH  358
            VF +   + +P+S ++IN  +  +GY K  +TGHGFR   ST+L+E+G +   IE QLAH
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  359  TPKDKVRASYNYAEHLPERKLMMQAW-ADYLDSL  391
              K+ +R++YN A+ L  R+ MMQ W ADY+DSL
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

407) NAL212_2545 in NC_015222


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 191/393 (49%), Positives = 279/393 (71%), Gaps = 2/393 (0%)

Query  1    MKLTDTAIKKAKPQAKPYRIADGGGMYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVT  60
            M LTD  +K AKP+ +PY++ADGGGMY+ +++NG+KYWRM YRFA+K+K L++GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARDRRNEARKLLANGADPGAVkqsqkkqakiaasnsFELIAREFHSLKTPMWSTNHA  120
            LADAR++R+EARK+LA G+DPG  K+ +K   +++  N+FE +ARE H  K+  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ADWIKTLEREIFPKFGNYPISEIDAPAVLDAIRAIESRDAHEvaarvlqrvravcaYAIA  180
             + I T+E++IFP +G+ PI+EI +  +L+A+R +E R+A E   +V QR   V  YAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRARHNPASEIKGALAPQPKIKHFAALTEKELPDFLRAVAAYPCYPLTKYATALLMLTF  240
            TGRA  NPA+++ +ALA   K+ HF+ LT +ELP+FL  +A+Y    +TK AT ++MLT 
Sbjct  181  TGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRTGEVRGAKWCEFDLDAKLWKIPAERMKSREPHIVPLAKQAIEILGELHPLTGHGEHLF  300
            VRT E+R A W ++D++AKLW IPAE MK + PHIVP + Q I ++ +L+P++ H   +F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  301  PNRTGNGKVISENTVLKVIERLGYKGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTE  360
              R +  K IS +++ +VIE LGYKGR+TGHGFR   ST L+  G + +  IE QLAH +
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  361  anatraaynranyMEYRAAMMQFWADTLDAMEA  393
             N+ R++YN+A+Y++ R  MMQ  AD +D++  
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

408) KPHS_05400 in NC_016845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 175/409 (43%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARTKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFAKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLE  297
             VR+ ELRFA+W+++DF   LW IPA              MKMK  HIVP S Q I L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNGALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLKS  403
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+ S
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

409) N559_4601 in NC_022082


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1009),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 175/409 (43%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARTKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFAKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAIVLLE  297
             VR+ ELRFA+W+++DF   LW IPA              MKMK  HIVP S Q I L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNGALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLKS  403
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+ S
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

410) intA_4 in NC_022370


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1011),  Expect = 7e-74, Method: Compositional matrix adjust.
 Identities = 176/408 (44%), Positives = 263/408 (65%), Gaps = 27/408 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPKE+ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKQAHA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +K+     + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRLLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I  +K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKVRHYPALPSSRLPEFLSRLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ LP+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWNEFDFDKALWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMNLLG  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDRKLLFPGDHDATKVMSENTVNNALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS ++ L+F G +D+ K +S +++N+ +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMMQWWADYID  402
            +   W    IE QL+H ++N++R++Y H ++ LD RR MMQW ADYID
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

411) STY4821 in NC_003198


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1010),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 173/410 (43%), Positives = 264/410 (65%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

412) TY21A_22985 in NC_021176


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1010),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 173/410 (43%), Positives = 264/410 (65%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

413) t4518 in NC_004631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  270 bits (1010),  Expect = 9e-74, Method: Compositional matrix adjust.
 Identities = 173/410 (43%), Positives = 264/410 (65%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKTEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDII  404
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+D +
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

414) GM18_2022 in NC_014973


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  269 bits (1007),  Expect = 1e-73, Method: Compositional matrix adjust.
 Identities = 174/391 (45%), Positives = 261/391 (67%), Gaps = 4/391 (1%)

Query  7    PLSDLQVSRAKAQERQTTLFDGGGLFVLISPTGGKLWRFKYRFNGKSKLLSLGSYPYVSL  66
            +L+D++V  AK++ER   L DGGG+++LI++ G+K WR KYRF GK K+LS+G YP V+L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  67   ADARAKREVYRKLLAHGIDPGEAKKAEQADKIAAAGSTFEAVARDWHRRFKSQWSAGHAE  126
            ADAR KR   RK+LA G DPGEAKK E+     +  +TFEAVAR+WH+    +WS    +
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  127  QIMKRLEQDVFPWLGTRPIGEIKAPELLTVLRRIEVR-SLETAFRVKTACGQVFRYAVAE  185
            +I+  +E+D+FP +G RPI+EIK+ ELL  LR++E R +LE   +V+  CG+VFRYA+  
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  186  GRAERDPVADLRGALPPVKYKNFAAPTNPKEVAPLLRAIDGFQGSFVVKCAMQLAPLLFV  245
            GRA+ +P +DL +AL+  K  +F+  T ++E++ +L  + G+ GS++ K A Q+  L  V
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  246  RPGELRHAEWAEIDLEAAEWNIPAAKMKMGVPHLVPLPRQAVEILETLHPLTGHGKYVFP  305
            R  ELR A+W +ID+EA  W+IPA  MKM  PH+VP + Q + ++  L+P++ H   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  306  CSRSLQRCMSENSVNAGLRRLGFEKSEITGHGFRAMARTILDEVLQVRPELIEHQLAHQV  365
                 ++ +S +S+N  +  LG+ K+ +TGHGFR    TIL+E     +  IE QLAH  
Sbjct  301  GRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  366  RDPLGRAYNRTTHLPERRKMMQTWADYLDGL  396
            ++++  +YN++  L  RR MMQ  ADY+D+L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

415) ETAE_3092 in NC_013508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  269 bits (1004),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 174/409 (43%), Positives = 263/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHDSN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH+++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSYLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K   LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLDAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ L +Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLD  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDS  403
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+DS
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

416) GM18_2884 in NC_014973


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 167/392 (43%), Positives = 271/392 (70%), Gaps = 3/392 (0%)

Query  6    VPLSEQQVRKAKPQAKETKMFDGMGLFLLVTPSGGKLWRFKYQFGGKEKLLAFGSYPEIS  65
            ++L++ +V+ AKP+ +  K+ DG G++LL+ ++G+K WR KY+F+GKEK+L++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  66   laeareklaaarkQVAAGIDPSGTKKALKAAQVAASESAFEIVAREWHTRFLNTWTAGHA  125
            LA+AREK + ARK +AAG DP+ +KK  K A   +  ++FE VAREWH    + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  126  GTILKRLERDVFPWVGNRPIGEIEPPEILAVLRRVESRGALETAHRIKTICGQVFRYAVA  185
            + I+  +E+D+FP +G+RPI+EI P E+L  LR++E RGALE  ++++  CG+VFRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  186  TGRATRDVAADLKGALPPAPEKHHASITDPKEVAQLLRAIQGYEGRFIVRCALRLSPLFF  245
            TGRA  + A+DL +AL ++P K H ++  ++E++++L  + GY G +I + A ++  L  
Sbjct  181  TGRADYNPAPDLASAL-ATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  246  VRPGELRHAEWSEVDFEEALWTIPAERMKMKASHIVPLSSQALEILKELHSFTGRGRYLF  305
            VR  ELR A+W ++DFE  LW IPAE MKMK +HIVP S Q + ++K+L++++ +   +F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  306  PCARSAARPMSNNAVNAALRRMGFDKDTMTGHGFRATARTILDELLNIRPDYIEHQLAHA  365
                 + +P+S++++N  +  +G+ K+ +TGHGFR T  TIL+E   + +  IE QLAH 
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHE-QGFNSAWIEMQLAHV  357

Query  366  VKDPNGRAYNRTAHLAERRKMMQTWADYLDGL  397
             K++   +YN++  L  RR MMQ  ADY+D+L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

417) ECO26_5435 in NC_013361


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  268 bits (1002),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 173/409 (43%), Positives = 264/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPM  60
            M L   +V TAKPKE+ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLAQARAKRDEAKKLLVQGIDPKAEQKEAQA--ENSGAYTFETIAREWHASN-KRWSED  117
            VTLA+AR KR EA+K+L  G DP   +KE +   + S   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRILRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  I+  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFSEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +++FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLE  297
             VR+ ELRFA+W+++DF+  LW IPA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDAAKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHTERNNVRAAYIHTSEHLDERRLMVQWWADFLEA  403
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW AD++++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

418) Dd1591_3702 in NC_012912


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  268 bits (1001),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 169/408 (42%), Positives = 266/408 (66%), Gaps = 24/408 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALTDV  +TAKP+E++YKLAD+ G+YLL+++NGSK W +KYRF GKE  +++G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREKRDEVRLLLSEGIHPTEKREEEKEQAQDA-QNTFEKVARDWHRNISQNRWSQTH  119
            LA AREKR E R +L+ G +P E + EEK   Q + +NTFE VAR+WH+    +RWS   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  AGRVWRDIERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
             + +   +E++I+P IG+R IA++K  +LLE+L+ +E+ G L+   ++RQR  ++ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QNDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLAQIERYkgraltrlalkltlCVF  239
              +  + NPA DL++A+A+PK  H P L  + LP+FL+++  Y G  +T+ A ++ +   
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELRFA+W +IDF   +W IP+E              KM+  H+VP S Q +AL+ +
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  300  IKAISGVHELIFPGDHRPTKPMSENTINSALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            + +IS  H L+F G + P KP+S ++IN  +  +GY     + GHGFR    + L E G 
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLEERKLMLQWWADYLDA  404
               W    +E Q++H ++N++R++Y H A+ L+ R+ M+QW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

419) ECABU_c49370 in NC_017631


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  267 bits (998),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 155/359 (44%), Positives = 243/359 (68%), Gaps = 16/359 (4%)

Query  1    MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  60
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARKKREEARKLVTAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  118
            LADAR KR EARK+++AG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  178
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  238
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQI  298
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  357
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

420) intB in NC_007613


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (995),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 157/382 (42%), Positives = 255/382 (67%), Gaps = 24/382 (6%)

Query  1    MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK  60
            M LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+LADAR KR EARK++AAG DP E K
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   RAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEEHANRVKKSLEDNIFPAIGSHNIAELGT  118
            +  K      +  TFE VAREW  T+ ++WS    + +  ++E +IFP IG + IAE+  
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  119  RDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRP  178
             +LL +++ +EK G LE   +++QR   + RYA+ +G  DYNPA ++A+A+A++++ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  179  ALELKRIPELLQKIDEYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPE  238
             L  + +P++L  +  YTG  +T+ AT++ +L  +R+ ELRFA+W +IDFE+ +W IP+E
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  239  REPIPGVKHSQRGAKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENT  298
                          KM+ PH+VP S Q +A++KQ+  +  +H L+FIG +DP KP+S ++
Sbjct  266  ------------VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKES  313

Query  299  VNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL---WSKDAVERQMSHMERNSVRAAYI  355
            +N  + ++GY  +  + GHGFR    + L E G+   W    +E Q++H+++NS+R++Y 
Sbjct  314  INQVIELLGYKGR--LTGHGFRHTMSTILHEQGFNSAW----IEMQLAHVDKNSIRGTYN  367

Query  356  HKAEHLDERKLMLQWWADFLDA  377
            H A+ LD R+ M+QW AD++D+
Sbjct  368  H-AQYLDGRREMMQWYADYIDS  388

421) c5371 in NC_004431


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 155/359 (44%), Positives = 243/359 (68%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  144
            LADAR KR EARK+++AG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

422) i14_4891 in NC_017652


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 155/359 (44%), Positives = 243/359 (68%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  144
            LADAR KR EARK+++AG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

423) i02_4891 in NC_017651


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 155/359 (44%), Positives = 243/359 (68%), Gaps = 16/359 (4%)

Query  27   MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVS  86
            MALTD KV++AKP E+ Y L DG+GM LL+++ GSKYWR ++RF+GK+ ++++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  87   LADARKKREEARKLVTAGIDPREHKRAVKEEQAKEI-ITFEKVAREWLVTN-QKWSEDHA  144
            LADAR KR EARK+++AG DP E K+  K      +  TFE VAREW  T+ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  145  NRVKKSLEDNIFPTIGARNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ  204
            + +  ++E +IFP IG R IAE+   +LL +++ +EK G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  205  SGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKIDDYTGRPLTRWATELTLLIFI  264
            +G  DYNPA ++A+A+A++++ H P L  + +P++L  + +YTG  +T+ AT++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  265  RSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPFSKQALAILKQI  324
            R+ ELRFA+W +IDFE+ +W IP+E              KM+ PH+VP S Q +A++KQ+
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  325  KQFCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGL  383
              +  +H L+FIG +DPRKP+S +++N  + ++GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

424) Dd703_3541 in NC_012880


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 170/408 (42%), Positives = 262/408 (65%), Gaps = 24/408 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALTDV  +TAKP+E++YKLAD+ G+YLL+++NGSK W +KYRF GKE  +++G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREKRDEVRLLLSEGIHPTEKREEEKEQAQDAL-NTFEKVARDWHRNISQNRWSQTH  119
            LA AREKR E R +L+ G +P E + EEK   Q +L NTFE VAR+WH+    +RWS   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  AGRVWRDMERNILPAIGQRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
             + +    E++I+P IG+R IA++K  +LLE+L+ +E+ G L+   ++RQR  ++ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QNDLIERNPAQDLTGAIAAPKATHRPALKLDKLPDFLARIECYkgraltrlalkltlCVF  239
              +  + NPA DL++A+A+PK  H P L  + LP+FL+ +  Y G  +T+ A ++ +   
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPPEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELRFA+W +IDF   +W IP+E              KM+  H+VP S Q +AL+ +
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  300  IKAISGAHELVFPGDHRPIKPMSENTINSALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            + +IS  H LVF G + P KP+S ++IN  +  +GY     + GHGFR    + L E G 
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVARQMSHQEHNGVRAAYIHKAEHLEERKLMLQWWADYLDA  404
               W    +  Q++H + N++R++Y H A+ L+ R+ M+QW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

425) EcolC_1237 in NC_010468


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 162/391 (42%), Positives = 266/391 (69%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSQTPGLFLLVHPNGSKYWRFRYWIDKKERLQAVGVYPLI  64
            +LT   + +A+P+++PYKL+D+   G++LL+++NGSKYWR +Y++  KE++ ++GVYP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADG--GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDV  59

Query  65   SLKEARKRATESRLLIAQGIDPMEEARKEKAIDALNMAASFKTVAEDWLATRVSGWSESY  124
            +L +AR + +E+R ++A G DP E  + EK    +++  +F +VA +W  T+   WS  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  125  TKQVRSALEKDVYPVLGKRSIVDITARDVLSLLQKKE-RTAPEQARKLRQRIGEIFKFAV  183
              ++  ++EKD++P +GKR+I +I + ++L  L+K E R A E+ RK+RQR GE+F++A+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  184  ITELVNRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  242
            +T   + NP +DL +AL + +  H + +  +E+P F   L   +GS+  +TA ++++LT+
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  243  LRTAELRLMRWEWVDLESATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            +RT ELR+ +WE +D+E+    +PAEVMK +RPH+VP S Q + L+++    S   ++VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  303  PGRFMD-KPLSASAILKALERIGYKSIATGHGWRTTFSTSLNESGRYNPDWIEIQLAHVP  361
             GR    KP+S  +I + +E +GYK+  TGHG R T ST L+E G +N+ WIE+QLAHV 
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GVRGVYNQAAYLKQRRAMMQNYSDAIDQI  391
            K ++RG YN+A YL  RR MMQ Y+D ID +
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

426) Nit79A3_1833 in NC_015731


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  265 bits (991),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 166/392 (43%), Positives = 270/392 (69%), Gaps = 4/392 (1%)

Query  1    MKLTDpeikaakpkekpYSLPDGHGLVLLVQPSGAKWWRYRYRFNGTAKMLSMGVYPDVT  60
            M LTD  +K+AKPKE+PY L+DG G+ LL++++G+K WR +YRF G  KMLS+GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKEARNQQARFKELLAQSIDPSLHRQEQKQQQAIATENSFESIARLWWNQWSAARNQRHA  120
            L +AR++++  + +LA + DP+  ++E+K    ++  N+FE++AR W +  +  ++ R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DYVIRRLEADIFPVIGRKPVTELSAPMLLMAIKKIEARGALDIAKRALTTCNQIMRYAVA  180
            D +I  +E DIFP IG++P++E+ +  LL A++K+E RGAL+  ++    C ++ RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  HGLAERNPAADIKPSDVLKPTTKTNYARLDQKELPELLRKIDAYDGQPLTKLALQLMALT  240
             G A+ NPA+D+  +  L    K +++ L  +ELP++L  + +Y G  +TK A Q++ LT
Sbjct  181  TGRADYNPAPDL--ASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  241  FVRTSELIGAKWDEIELDNKQWRIPAECMKMKTPHIVPLSNQAIAVLGKIKELAADQILL  300
             VRT EL  A W++I+++ K W IPAE MKMK PHIVP S+Q IA++ ++  ++ ++ L+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPSERRDGNSMSNNTILYALYRLGYHSRMTGHGFRGIASTILHERGYSHEHIELQLAHAK  360
            F +     +++S+++I   +  LGY +R+TGHGFR   STILHE+G++   IE+QLAH  
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  361  RDQVSASYNHALYLEPRARMMQDW-ADYLEAI  391
            ++ + ++YNHA YL+ R  MMQ W ADY++++
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

427) BTI_1100 in NC_021173


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  265 bits (991),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 172/399 (44%), Positives = 270/399 (68%), Gaps = 10/399 (2%)

Query  1    MPLTDTAIKNAKPADKPMRLFDGGGLYLEIAPSGGKWWRLKYRFGGKEKRISLGVYPDVP  60
            M+LTD  +K AKP ++P +L DGGG+YL I ++G+K WR+KYRF+GKEK +S+GVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKEARERHDKARALLDGGADPGeakkaekraarLSTENSFEAVAREWHAKYAPSWSASHG  120
            L +ARE++  AR +L +G+DPGEAKK EK A ++S  N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ARLLRRLEVDAFPWIGGKPIAELAPPDVLDVLRRVEKRGALETAHRLHANVGQVCRYAVA  180
              ++  +E D FP IG +PIAE+ P ++L+ LR++EKRGALE  ++++   G+V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAARDVTADLRGALPPVQQEHMAAITDPKQVAELLRAIDGYQGTLPVSCALRLAPLLF  240
            TGRA  + ++DL +AL+  ++ H + +T +++++++L  + GY G++    A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  QRPGELRAAEWAEFDLDAGTWEIPSDRMKRTKQGKAAGGAHIVPLPLQAVAILRELQLLT  300
             R  ELR A+W ++D++A  WEIP++ MK  +       +HIVP + Q +A++++L+ ++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-------PHIVPPSEQVIALFKQLEPIS  292

Query  301  GNGRLLFPSVRTKDRPMSDNTVNAALRRLGYDGDTMTGHGFRAMARTILDEVLGVPAPII  360
             +  L+F +     +P+S +++N  +  LGY G  +TGHGFR    TIL+E  G  ++ I
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHTVKDPLGRAYNRTAHLQQRREMMQKWADYLDRL  399
            E QLAH  K+++  +YN++  L+ RREMMQ  ADY+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

428) Glov_1135 in NC_010814


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  265 bits (990),  Expect = 3e-72, Method: Compositional matrix adjust.
 Identities = 162/402 (41%), Positives = 269/402 (67%), Gaps = 13/402 (3%)

Query  6    VPLSDIQVSKAKPKDKDYNLFDGGGLYLLVTSTGGKLWRMKYRFEGKERRIAFGSYPEIS  65
            ++L+D++V  AKPK++ Y+L DGGG+YLL+ + G+K WRMKYRF GKE+ +++G YP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  66   LADarrrkeearkLVANGTDPGNLKKAQKQAGEDRTANSFEVIAREWFGAFQNQWTPGHA  125
            LADAR ++ EARK++A G DPG+ KK +K A +    N+FE +AREW  +  ++W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  126  TKLFSRLERELFPYIGAMPIEEIKAPDVLKVLKRIESRGILETAHRVKTIISQVLRYAIA  185
              ++  +E+++FPYIG  PI EIK+ ++L  L+++E RG LE  ++V+   ++V+RYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  186  HGHRADRDCTADLRGALPPARAKHFGALTDPKEVAPLLRAIDSFQGSFVVKCALQLSPML  245
             G RAD + ++DL +AL+ ++  HF  LT ++E++ +L  + ++ GS++ K A Q+  + 
Sbjct  181  TG-RADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  246  FCRPGELRGMEWAELNLDSAEWNIPVERMKLKNQTKQDRKGQFHLVPLSSQAVQILRELH  305
              R  ELR  +W ++++++  W+IP E MK+K           H+VP S Q + ++++L+
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRP---------HIVPPSEQVIALFKQLE  289

Query  306  PLTGHSKYVFPCHRTPLRPMSENAITAALRRLGYTGSEMTGHGFRATARTILDEVLGFRP  365
            P++ H   VF  +  P +P+S ++I   +  LGY G  +TGHGFR T  TIL+E  GF +
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR-LTGHGFRHTMSTILHEQ-GFNS  347

Query  366  DIIEHQLAHAVRDANGRAYNRTSFLKDRRQMMQQWADYLDGL  407
              IE QLAH  +++   +YN++ +L +RR+MMQ  ADY+D+L
Sbjct  348  AWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

429) NH8B_1001 in NC_016002


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  264 bits (988),  Expect = 5e-72, Method: Compositional matrix adjust.
 Identities = 166/408 (41%), Positives = 260/408 (64%), Gaps = 19/408 (4%)

Query  1    MALTKVAIDSLSPRADGKPLKVPDGQGLYVWVMPTGAKYWRLKYRFGGKEKSLAIGVYPE  60
            MALT V + +  P+   +P K++DG G+Y+ + + G+KYWR+KYRF+GKEK L+IGVYP+
Sbjct  1    MALTDVKVKTAKPKE--RPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  61   VSIKEARQKKDAARRLLADGVDPGEKKKAIKRDQTIEDASSFRAVAIEWHEKMAAEWAPR  120
            V++ +AR+K+  AR++LA G DPGE KK  K    +   ++F AVA EWH+  A  W+ R
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  HAAAVLRSLEMYLFPALGDRPIAQITAMELMLELRKVEQLGLHDTTKRLRERCTAIFRRA  180
                ++ ++E  +FP +G RPIA+I +MEL+  LRK+E+ G  +  +++R+RC  +FR A
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  EVTGRASSNPAAALVDEFISPVSAPQPALEQEDLPAFLDALSTTDRITLQTKYLVQLIMI  240
             VTGRA  NPA+ L   + +P     P L  ++LP FL  L+     ++ TK   Q+IM+
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYT-GSIITKTATQIIML  237

Query  241  LFTRIGETVRAEWDHIDLEAGVWEIPPETRKLKRKLMANASAHVVPLPRQAVEIFRQLQA  300
               R  E   A+W++ID+EA +WEIP+E  K+KR       +H+VP + Q + +F+QL++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-------PHIVPPSEQVIALFKQLEP  290

Query  301  FKLGDSNYVFPSFRYRKNHMSEATPLKAYERMGYGGNNKAHGHVVTHGFRATASTILNEA  360
            +   +   VF +    ++ +S  +  +  E +GY       G++  HGFR T STIL+E 
Sbjct  291  IS-KHHPLVFIGRNDPRKPISKESINQVIELLGY------KGRLTGHGFRHTMSTILHEQ  343

Query  361  GFNPDAIERQLSHKEPNKVRAAYNRAKYLEERRKMLQCW-ADYLDKMA  407
            GFN+  IE QL+H + N +R++YN+A+YL+ RR M+Q W ADY+D ++
Sbjct  344  GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLS  390

430) BTH_I0928 in NC_007651


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  263 bits (983),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 170/393 (44%), Positives = 272/393 (70%), Gaps = 4/393 (1%)

Query  47   PLTDLKVRRAKPAEQPYRLADGKGLYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSl  106
            +LTD+KV+ AKP E+PY+LADG G+YL + +NGS+YWRMKYRF GKEK+ S+GVYP+V+L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  107  aqarqaclaarkllaaGTDPTEQKREIKRARAIEASSSFEAVAREWFESQKDGWTEVYAN  166
            A+AR+    ARK+LAAG DP E K+E K A  +   ++FEAVAREW +++ D W+  Y +
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  167  KVINSLEVDAFPRIGSKPLRDIEAPDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMT  226
             +I+++E D FP IG +P+ +I + ++LE +R +E RG  E  ++V QR   VF+Y+I+T
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  227  GRCSRNPAADIDAETVLKKGQGVKHMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALT  286
            GR   NPA+D+   + L   + V H + + + E+P+++ D+A+Y+G  +T+ A +++ LT
Sbjct  182  GRADYNPAPDLA--SALATPKKV-HFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  287  FTRTTEMINAEWDEFDERAAEWRIPPDRMKMRDPHIVPLSRQALEVLAALRELNGNQRLV  346
              RT E+  A+W+++D  A  W IP++ MKM+ PHIVP S Q + ++  L  ++ ++ LV
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  347  FYS-VQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATVLRELGYSRDVVDRQLAHAE  405
            F +  + R  IS++++   +  +GYK+R+TGHGFR   +T+L+E G++   ++ QLAH +
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVD  358

Query  406  RNQVTAAYVHAEYLPERRKMMQHWADYLTQTAN  438
            +N + ++Y HA+YL  RR MMQ  ADY+   ++
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

431) Rpic_2072 in NC_010682


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  263 bits (984),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 172/394 (44%), Positives = 268/394 (69%), Gaps = 8/394 (2%)

Query  1    MALTDTAVRNARPAEKPIKLFDGGGLFLHITPGGQRYWRLKYRFAGKEKLLALGVYPEVG  60
            MALTD  V+ A+P E+P KL DGGG++L I + G +YWR+KYRFAGKEK+L++GVYP+V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHTKYAPGWSKSNA  120
            L +AR++R EA+++L+ G DP+  +K  K+A      N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DKVIARLQNDVFPWLGGRPIAELKAPDLLAVCRRVESRGALDTAHRVLQTCGQIFRYAVA  180
            D +I  +++D+FP +G RPIAE+K+ +LL   R++E RGAL+  ++V Q CG++FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPKEVAGLLRVFDGFTGTFVVKCALLLAPMLF  240
            TGRA+ +P+ DL +AL+ +K  H++  T ++E++ +L  + G+TG+++ K A  +  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRAAEWADIDLDAGEWRFVSS--KRDVAHIVPLSTQAVAILRDLHALTGHGHYVF  298
            VR  ELR A+W DID++A  W + +   K   +HIVP S Q +A++++L++++ H   VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARDKKKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQLAH  358
             G  D +KP+S  +IN  +  +G   +  +TGHG R    TIL+E  GF++  IE+QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  RKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDRL  391
              K++  ++Y++  +L  R++MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

432) Despr_0274 in NC_014972


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  262 bits (980),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 178/398 (45%), Positives = 275/398 (70%), Gaps = 15/398 (3%)

Query  2    LVDTAIKNAKPKEQPYKLTDGKGLYLLVKSTG-KYFRFNYRFQDKQKTLALGVYPDVSla  60
            L D  +K AKPKE+PYKL+DG G+YLL+++ G KY R +YRF +K+K L++GVYPDV+LA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  61   garerlaearkliaDGIDPGEQRKMDKEA-ATNL-NSVEAVAREWFLKNKHTWTDNHARD  118
            +ARE+ +EARK++A G DPGE +K +K A   +L N+ EAVAREW   + + W+     +
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  119  IITRLEANVFPWLGRTPIADVTAPMLLAVLRRIEDRGAIETAHRIKQMCGQVFRYAVATG  178
            II  +E ++FP +G+ PIA++ +  LL  LR++E RGA+E  ++++Q CG+VFRYA+ TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  179  RAERDPSADLRGALPPPPSKSMATITDPKGVSALLRAIRGYKGEIITRCALRLAPLTFVR  238
            RA+ +P++DL +AL+ P     + +T ++ ++ +L  + GY G IIT+ A ++  LT VR
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  239  PGELRHAEWADIDLDRAEWKIPPEKRKLKKALKAIPQNFHFVPLSRQALAVLRELQPLTG  298
              ELR A+W DID++   W IP+E  K+K++        H+VP S Q +A++++L+P++ 
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRP--------HIVPPSEQVIALFKQLEPISK  293

Query  299  EGRYVFPSLRTGERPMSENTVNAALRRMGYAKDEMTGHGFRAMASTLLHEQGWPSDVIER  358
            +   VF +     +P+S +++N  +  +GY K+ +TGHGFR   ST+LHEQG  S  IE 
Sbjct  294  HHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  359  QLAHKERNSVKAAYNYAQHIPERRKMMQAW-ADYLDAL  395
            QLAH ++NS++++YN AQ +  RR MMQ W ADY+D+L
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

433) RSc1871 in NC_003295


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  262 bits (978),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 170/394 (44%), Positives = 266/394 (68%), Gaps = 8/394 (2%)

Query  1    MALTDTAIRNAKPADKPIKLFDGGGLFLHVTPAGQRYWRLKYRFAGKEKLLAIGVYPEIG  60
            MALTD  ++ AKP ++P KL DGGG++L + + G +YWR+KYRFAGKEK+L+IGVYP++ 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHAKYAPGWSESNA  120
            L +AR++R EA+++L+ G DP+  +K  K+A      N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KKVLARLENDVFPWLGGRPIAEVKAPELLGVARRVESRGALDTAHRVLQTCGQIFRYAVA  180
              ++  +E+D+FP +G RPIAE+K+ ELL   R++E RGAL+  ++V Q CG++FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPKEVAGLLRMFDGFTGTFIVKCALLLAPMVF  240
            TGRA+ +P+ DL +AL+ +K  H++  T ++E++ +L  + G+TG++I K A  +  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRAAEWADIDLDAAEWRFVSS--KRDVAHIVPLSTQAVAILRDLHALTGHGRYLF  298
            VR  ELR A+W DID++A  W + +   K   +HIVP S Q +A++++L++++ H   +F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARDKAKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQLAH  358
             G  D  KP+S  +IN  +  +G   +  +TGHG R    TIL+E  GF++  IE+QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  RKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDEL  391
              K++  ++Y++  +L  R++MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

434) MADE_1010570 in NC_011138


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  261 bits (977),  Expect = 3e-71, Method: Compositional matrix adjust.
 Identities = 168/400 (42%), Positives = 267/400 (67%), Gaps = 9/400 (2%)

Query  1    MPLTDIQIKQAQASTKDIWLTDEKGLRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVS  60
            M+LTD+++K A++  +   L+D  G+ LL++ NGSKYWR+KYRF GK+K L+IGVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKDAREAVSEARRQLRDDIDPSAIKQEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHA  120
            L DARE  SEAR+ L  + DP+  K+E K    +S  + F++ AR W + + ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ARIWTRLNDNALKTLGKRPIGEITPQDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQ  180
              I   ++ + +  +GKRPI+EI P +++ +++K+E RGAL+  ++V Q    V R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGVLLHNPASELSGILEKRKTSHRASLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHT  240
            TG    NPA++L++ L   K  H + L  +ELP+FL DL +Y   G ++TK A ++++ T
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGY--TGSIITKTATQIIMLT  238

Query  241  FVRPGELAGARWDEFDLEEKLWRIPAHRMKMKSDHIVPLSRQALAVLENTKPFSARFEFV  300
             VR  EL  A+W+++D+E KLW IPA+ MKMK  HIVP S Q +A++ +  P+S +  +V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  301  FPSERDRFKQMSDNTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETGFNPDAIER  360
            F +  D  K +S +++   I  +GY      K++   HGFR T S+IL+E GFN+  IE 
Sbjct  299  FIGRNDPRKPISKESINQVIELLGY------KGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  361  QLSHMERNGVRAAYTHHARYLEERKEMMQWWSDYLDSLKN  400
            QL+H+++N++R++Y +HA+YL+ R+EMMQW +DY+DSL +
Sbjct  353  QLAHVDKNSIRGTY-NHAQYLDGRREMMQWYADYIDSLSE  391

435) intB in NC_009076


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (969),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 168/394 (43%), Positives = 259/394 (66%), Gaps = 8/394 (2%)

Query  1    MPLTDTAVKNAKPAAKPYKLTDGGGMYLLVQPNGAKYWRMAYRLHGKQKLLAIGVYPAVG  60
            M+LTD  VK AKP  +PYKL+DGGGMYLL+++NG+KYWRM YR+ GK+K+L+IGVYP V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARERRDDARKKVAAGIDPSAAKRVEKRVARLAASNTFEAVAHGWMNERKTVVEIGQY  120
            LA ARE+R +ARK +AAG DP+ AK+ EK   +++  NTFEAVA+ W + +     + +Y
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSL-RY  119

Query  121  -EKTLARFDSDVFPWLGKRPIAEVDAPEILTALKRIDSRGARYTAHRVRSEISRVFRYGI  179
             +  +  F+ D+FP +GKRPIAE+ + E+L AL++++ RGA    ++VR   + VFRY+I
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  KEGYCKADPARDLVDAIPPAQTTHFAAITDPAKVAEMLRAFDGFSGTFPVLCALKLAPLL  239
              G    +PA DL  A++ ++  HF+ +T +  +++ L  + G++G++    A ++  L 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  240  FVRPGELRQAQWAQFDLDKGEWRYL--VTKTKTEHLVPLSLQAIAILRELHALTGAGRYV  297
             VR  ELR A+W ++D++   W     V K K  H+VP S Q IA++++L++++     V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  298  FPGARDRNRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLA  357
            F G  D  +P+S  +IN  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLA
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  358  HTVPDNLGSAYNRTKFIKKRREMMQKWADYLDCL  391
            H   +++ ++YN+++++  RREMMQ  ADY+D L
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

436) Dd586_3778 in NC_013592


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (969),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 266/393 (68%), Gaps = 6/393 (1%)

Query  1    MPLTDAKIRSTKPANKPIKLADGGGLYLDVRPSGSKLWRYRYRIAGKENVFALGEYPTLS  60
            M+LTD K++++KP ++P KLADGGG+YL + ++GSK WR +YR+AGKE+++++G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAEARAEHDKARALVKQAIHPAHQRQLERMASYSANANTFEAVAREWIDKKSPDWTPYYL  120
            LA+AR  +  AR ++  + +P++ ++ E++A   +  NTFEAVAREW + K+  W+  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  RQVERFLAADVFPAIGKLPIKSVKAAHLLEIIKRIEGRGAETVALLIRQWSSAIFRYAVA  180
             ++   +  D+FP IGK PI  +K+ +LLE ++++E RGA      +RQ+ + +FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TLRADSDPAAALKGAIRRPKVEHHKPLSRTEIEDFMQALNRYGGYRTTVIALKLMLLTFV  240
            T RAD +PA+ L +A+  PK  H   L+  E+ +F+  L  Y G   T  A ++++LT V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTVELRKAEWREFDLDGAEWRIPAGRMKMREEHIVPLSTQAIVLLRELQTYTGGRGWLFP  300
            RT ELR A+W ++D+++  W IPA  MKM+  HIVP S Q I L+++L+  +  +  +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  NYRNPQDCMTATTLNRALERMGFNGKDSIGFSAHGFRATASTILNEMGYRPDVIERQLAH  360
               +P+  ++  ++N+ +E +G++G+    +++HGFR T STIL+E G+ +  IE QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGR----LTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  361  TERNKVRASYNRAVYLDERRKMMQAW-ADFVNG  392
             ++N +R++YN+A YLD RR MMQ W AD++++
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDS  388

437) BCAL2961 in NC_011000


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (967),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 179/399 (45%), Positives = 272/399 (69%), Gaps = 10/399 (2%)

Query  1    MPLTDTTIRNTKPAEKPVKLFDGGGLFLLVTPAGQRYWRLKYRAAGKEKLLALGVYPDVT  60
            M+LTD  ++ +KP E+P KL DGGG++LL+ + G +YWR+KYR AGKEK+L++GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laaarrkrdeareklaaGIDPGEAKKAEKRTARLSAENSFEAVAREWHIKYAPTWSESHG  120
            LA AR KR EAR  LAAG DPGEAKK EK + ++S  N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SRILRRLEVDAFPWIGSKPIAELAPPDVLEVLRRVEKRGALETAHRLHANVSQVCRYAVA  180
              I+  +E D FP IG +PIAE+ P ++LE LR++EKRGALE  ++++   ++V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAQRDVTADLRGALPPVQQEHMAAVTDPKQVAELLRSIDGYQGTFPVLCALRLFPLLF  240
            TGRA+ + ++DL +AL+  ++ H + +T +++++++L  + GY G++    A +++ L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  QRPGELRAAEWSEFDLDASTWEIPSERMKRTKQGKASGGAHIVPLSAQAVAILRDLHALT  300
             R  ELR A+W ++D++A  WEIP+E MK  +       +HIVP S Q +A++++L++++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-------PHIVPPSEQVIALFKQLEPIS  292

Query  301  GNSRFLFPSVRTKDRPMSDNTINGALRRLGYDGDTMTGHGFRAMARTILDEVLGVPVAIV  360
             +  ++F +     +P+S ++IN  +  LGY G  +TGHGFR    TIL+E  G   A +
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWI  350

Query  361  EAQLAHAVKDPLGRAYNRTAHLPQRREMMQRWADYLDQL  399
            E QLAH  K+++  +YN++  L  RREMMQ+ ADY+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

438) intZ in NC_012759


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 163/391 (42%), Positives = 263/391 (68%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  64
            +LT   + +A+P+++PYKL+D+   G++LL+++NGSKYWR +Y++  +E + +IGVYP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADG--GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDV  59

Query  65   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  124
            TL +AR + +E+R ++A G +P E  + EK    +++   F  VA +W  T+ + WS  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  125  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKE-RTAPEQARKLRRRIGEIFKFAV  183
              ++  ++EKD++P +GKR+I +I + ++L  L+K E R A E+ RK+R+R GE+F++A+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  184  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  242
            +T     NP +DL +AL + +  H + +  +E+P F   L   +GS+  +TA ++++LT+
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  243  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            +RT ELR+ +WE I++E     +PAEVMK +RPH+VP S Q + L+++    S   ++VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  303  PGRFMD-KPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  361
             GR    KP+S  +I + +E +GYK+  TGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  391
            K +IRG YN+A YL  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

439) intZ in NC_000913


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (968),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 163/391 (42%), Positives = 263/391 (68%), Gaps = 7/391 (1%)

Query  5    PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  64
            +LT   + +A+P+++PYKL+D+   G++LL+++NGSKYWR +Y++  +E + +IGVYP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADG--GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDV  59

Query  65   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  124
            TL +AR + +E+R ++A G +P E  + EK    +++   F  VA +W  T+ + WS  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  125  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKE-RTAPEQARKLRRRIGEIFKFAV  183
              ++  ++EKD++P +GKR+I +I + ++L  L+K E R A E+ RK+R+R GE+F++A+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  184  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  242
            +T     NP +DL +AL + +  H + +  +E+P F   L   +GS+  +TA ++++LT+
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  243  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  302
            +RT ELR+ +WE I++E     +PAEVMK +RPH+VP S Q + L+++    S   ++VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  303  PGRFMD-KPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  361
             GR    KP+S  +I + +E +GYK+  TGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  362  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  391
            K +IRG YN+A YL  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

440) intZ in NC_010473


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  259 bits (966),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 163/391 (42%), Positives = 263/391 (68%), Gaps = 7/391 (1%)

Query  34   PLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLI  93
            +LT   + +A+P+++PYKL+D+   G++LL+++NGSKYWR +Y++  +E + +IGVYP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADG--GGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDV  59

Query  94   TLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESY  153
            TL +AR + +E+R ++A G +P E  + EK    +++   F  VA +W  T+ + WS  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  154  AKQVRSALEKDVYPVLGKRSIVDITARDVLALLQKKE-RTAPEQARKLRRRIGEIFKFAV  212
              ++  ++EKD++P +GKR+I +I + ++L  L+K E R A E+ RK+R+R GE+F++A+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  213  ITELVTRNPVADLDTALKARRPGHNAWIPISEIPAFYKALER-AGSVQIQTAIRLLILTA  271
            +T     NP +DL +AL + +  H + +  +E+P F   L   +GS+  +TA ++++LT+
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  272  LRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVF  331
            +RT ELR+ +WE I++E     +PAEVMK +RPH+VP S Q + L+++    S   ++VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  332  PGRFMD-KPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVP  390
             GR    KP+S  +I + +E +GYK+  TGHG R T ST L+E G +++ WIE+QLAHV 
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVD  358

Query  391  K-GIRGVYNQAAYLKQRRAMMQDYADAIDSI  420
            K +IRG YN+A YL  RR MMQ YAD IDS+
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

441) Ppro_1315 in NC_008609


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  258 bits (965),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 155/364 (43%), Positives = 249/364 (69%), Gaps = 6/364 (1%)

Query  2    PAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKRA  61
            + G+K WR KYRF+GKEK+LS+G YPD++LA+A+ KR EAR+ +A G DPG  +KE K A
Sbjct  32   ANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEKIA  91

Query  62   EQEQQEIVENSFKVVAREWHGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVDL  121
                Q  + N+F  VAREWH   +++WS       +D +E+DIFP +G +P+A++KP++L
Sbjct  92   ---LQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMEL  148

Query  122  LAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERDSAADLRGALPPVREKHHAALT  181
            L  LR++E RGALE  ++VR  CG+V+RYA+ TGRA+ ++A+DL +AL+  +  H + LT
Sbjct  149  LEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLT  208

Query  182  DPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEKM  241
             ++E++++L  + G+ G++  K A ++  +  VR  ELR  +W +ID+++  W+IPAE M
Sbjct  209  -ANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVM  267

Query  242  KMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSDE  301
            KMK++HIV+   Q +A++K+L+P++     VF+ +  P +P+++++IN  +  +GY +  
Sbjct  268  KMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKG-R  326

Query  302  MTGHGFRAMARTILDEVLQVRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWADY  361
            +TGHGFR    TIL+E     +  +E QLAHV +++   +YN++  L  RR MMQ  ADY
Sbjct  327  LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADY  385

Query  362  LDGL  365
            +D+L
Sbjct  386  IDSL  389

442) GM21_0997 in NC_012918


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  258 bits (965),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 169/402 (43%), Positives = 264/402 (66%), Gaps = 14/402 (3%)

Query  6    LPLTDSQVTRAKSQAKEAKLYDGGGLYLLISAIKLDSSGKQLPPTKLWRFKYRFAGKEKL  65
            ++LTD +V  AK++ +  KL DGGG+YLLI+A            +K WR KYRFAGKEK+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINA----------NGSKYWRMKYRFAGKEKM  50

Query  66   AAFGAYPSVSLSEARKRREEAKQLLVQGVDPNEEKKARKAALSSHCQNTFEAVAREWHSR  125
             ++G YP V+L++AR +R EA+++L  G DP E KK  K AL    +NTFEAVAREWH  
Sbjct  51   LSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT  110

Query  126  FKGNWSEKHAEQIMKRLEQEVFPFLGARPISEIKAPDLLLVLRQIEAR-TLETAHRVRIA  184
              + WS +  ++I+  +E+++FP++G RPI+EIK+ +LL  LR++E R +LE  ++VR  
Sbjct  111  KADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQR  170

Query  185  CGQVFRYAVATGRAEHDPVSMLRGALPPIKNNHFAAPVMPSDVGPLLKAIDGFKGSPIVK  244
            CG+VFRYA+ TGRA+ +P + L +AL+  K+ HF+  + ++++  +L  + G+ GS I K
Sbjct  171  CGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPF-LTANELPHFLTDLAGYTGSIITK  229

Query  245  AAMQLAPHLFVRPGELRQAEWSEVDLQAGEWNIPAAKMKMGQPHLVPLSRqalqilqdlq  304
            +A Q+     VR  ELR A+W ++D++A  W+IPA  MKM +PH+VP S Q + ++++L+
Sbjct  230  TATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLE  289

Query  305  aiTGHGRYVFPCHRSRLRCMSENAVNAGLRRLGFEKHEITGHGFRAMARTILDEVLHFRP  364
            +I+ H   VF  +    + +S +++N  +  LG+ K  +TGHGFR    TIL+E   F +
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNS  347

Query  365  DIIEHQLAHAVKDPLGRAYNRTSHLAERRRMMQQWSEFLDQL  406
              IE QLAH  K+++  +YN++  L  RR MMQ  ++++D L
Sbjct  348  AWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

443) Tbd_2005 in NC_007404


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  258 bits (963),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 177/398 (45%), Positives = 260/398 (66%), Gaps = 11/398 (2%)

Query  17   VALTDTAVKKAKPGDKPYKMADEKGLYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVS  75
            +ALTD  VK AKP ++PYK+AD  G+YLL+N  G KYWRM YRF GK K L++GVY+DV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  76   LararqkrddaraMLADGTDPGEQRKETKRANQAAQANSFEAVAREWHAMKLKRKWTQST  135
            LA AR+KR +AR +LA G DPGE +KE K A Q +  N+FEAVAREWH  K  R W+   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADR-WSLRY  119

Query  136  ADKTMAQLEAYVFPEMGHLPIASVKASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGV  195
             D  +  +E  +FP +G  PIA +K+ +LL  LRK+E+RG      ++R+ CG++FRY++
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  196  ATGRAEDNPAAHLLGALHKPEVNHRPAITDRRGFGAFLRDLREATGYDAVTRHAAYFALL  255
             TGRA+ NPA++L +AL  P   H P +T    +  FL DL   TG   +T+ A+ + +L
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTA-NELPHFLTDLAGYTG-SIITKTATQIIML  237

Query  256  TFVRAQEFRYAKWEEIDWQAKEWKVPAKRMKTGKALPAHTVPLSQQALALLTELKNLTGH  315
            T VR+QE+R+A WE+ID +AK W +PA  MK  +   +H VP S+Q +AL+ +L  ++ H
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR---PHIVPPSEQVIALFKQLEPISKH  294

Query  316  SPYLFPKVKGYGDAEVISENTVGKMLNKMGYQGRQCVHGFRASARSILSEQGWSREAMER  375
             P +F  +   +    IS +++ ++++ +GY+GR   HGFR +  +IL EQG +   +E 
Sbjct  295  HPLVF--IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  376  QLDHKETDSTVAAYARSEHLPERRNMMQAW-ADTCDAL  412
            QL H + +S  ++Y +++ L  RR+MMQ W AD  D+L
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

444) PAU_03981 in NC_012962


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  258 bits (963),  Expect = 4e-70, Method: Compositional matrix adjust.
 Identities = 165/408 (41%), Positives = 269/408 (66%), Gaps = 27/408 (6%)

Query  1    MKLNARQIETAKPKDKAYKLADGGGLYLEITPRGSKYWRMKYRRPTDKKEDRLAFGVYPV  60
            M L   ++ TAKPK+++YKLADGGG+YL I + GSKYWRMKYR +   KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   ISLadarakrdeakkLIASGVDPKATQKEAQAEVSGEFN--FETIARKWHASN-KRWGDY  117
            ++LADAR KR EA+K++A+G DP  ++KE +  +   ++  FE++AR WH ++  RW+  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  NRARVLRSLEQYIFPHIGKVDVRQLKTSHLLAPIRVVDDAGKHDVAQRLQQRVTAIMRYA  177
             R  ++ ++E+ IFP IGK  + ++K  +LL ++R ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDIIDSNPAIDMAGALTMPKTKHYPALPSNCFPELLERINRYCGRKITRLAVVLTLLT  237
            +  +  D NPA D+A+AL+ PK  H+P L +N +P++L  +  Y G  IT+ A  + +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEIDFDISVWQIPGQRNPIEGVRYSYRGMKMKSAHIVPLSNQAIDVLQ  297
             VR+ ELRFA+W++IDF+  +W+IP++             MKMK +HIVP S+Q I +++
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKELSGDNELLFPGDHDPNKVMSENTVNNALRVMGYDTKTEVCGHGFRAMACSALVESG  357
            QL  +S ++ L+F G +DP K +S +++N+ + ++GY  K  + GHGFR    + L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSKDAVERQMSHTERNGVRAAYIHTSEHLEERRLMIQWWADYLD  402
            +   W    +E Q++H ++N++R++Y H ++ L+ RR M+QW ADY+D
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

445) intC in NC_009659


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  257 bits (962),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 172/402 (43%), Positives = 260/402 (65%), Gaps = 14/402 (3%)

Query  7    PLTDLRIKAAKPKEKPYQLADGEGMYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYPAV  66
            +LTD+++K+AKPKE+PY+LADG GMYL I ++GSK WRM YR   +     L++G YP V
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGK--EKMLSIGVYPDV  59

Query  67   GLAEARRKRADTKKQIVEGVDPAQARRVEKaisataaantfeavaRMWHQNKLEQWQPRT  126
             LA+AR KR++++K +  G DP++A++ EK     +  NTFEAVAR WHQ K ++W  R 
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  ANNILRRLEQDVFPLIGKRPIAEVKAPVMLDVLRQIEKRGAAEIARRNAQVCSQIFRYAI  186
             ++I+  +E+D+FP IGKRPIAE+K+  +L+ LR++EKRGA E  R+  Q C+++FRYAI
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  ACGIAENDPVPALRGALKPRIKGVHAAILVA-ELPEFLETLNHNKARMFPVTRILMQLMM  245
              G A+ +P P L +AL    K VH ++L A ELP+FL  L    + +  +T+   Q++M
Sbjct  180  VTGRADYNPAPDLASALATP-KKVHFPFLTANELPHFLTDLAGYTGSI--ITKTATQIIM  236

Query  246  LTFVRTSELTETPWSEVDLKNEQWVIPWQRMKMGKRKINPRKVDHHVFLPKQGWAFLREL  305
            LT VRT EL  + W ++D+    W IP + MKM +  I P    ++V+      A++++L
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPP--SEQVI------ALFKQL  288

Query  306  RTYTGGNQWLFPNQRDPKKPISNGAILAALKRLGYAGKHTGHGFRSLAKGILKTLGNDIS  365
               +  +  +F  + DP+KPIS+ +I   +  LGY G+ TGHGFR     IL   G + +
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSA  348

Query  366  NIERQLAHSSGEAYGASYDRESFLEERKIMMQGYADYIDAVS  407
             IE QLAH   ++  ++Y++  +L+ R+ MMQ YADYID++S
Sbjct  349  WIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

446) RCFBP_11461 in NC_014307


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  257 bits (962),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 169/394 (43%), Positives = 265/394 (68%), Gaps = 8/394 (2%)

Query  1    MALTDTAIRNAKAADKPIKLFDGGGLFLHITPAGQRYWRLKYRFAGKEKLLAIGVYPEVG  60
            MALTD  ++ AK+ ++P KL DGGG++L I + G +YWR+KYRFAGKEK+L+IGVYP+V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   lkeardrreeakrllGEGVDPSVERKVRKVATVERAANSFEAVAREWHAKYAPGWSESNA  120
            L +AR++R EA+++L+ G DP+  +K  K+A      N+FEAVAREWH   A  WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  KKVLARLENDVFPWLGGRPIAELKAPELLGVARRVESRGALDTAHRVLQTCGQIFRYAVA  180
              ++  +E+D+FP +G RPIAE+K+ ELL   R++E RGAL+  ++V Q CG++FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDPSGDLRGALPPAKGKHYAAPTDPREVAGLLRMFDGFTGTFVVKCALLLAPMLF  240
            TGRA+ +P+ DL +AL+ +K  H++  T + E++ +L  + G+TG+++ K A  +  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRAAEWADIDLDAGEWRFVSS--KRDVAHIVPLSTQAVAILRDLHALTGHGRYLF  298
            VR  ELR A+W DID++A  W + +   K   +HIVP S Q +A++++L++++ H   +F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARDKSKPMSEAAINAALKRMGIDTQKEFTGHGVRPIARTILREVLGFEAEVIELQLAH  358
             G  D  KP+S  +IN  +  +G   +  +TGHG R    TIL+E  GF++  IE+QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  RKKDPNGAAYDRVAFLAVRKQMMQAW-ADYLDEI  391
              K++  ++Y++  +L  R++MMQ W ADY+D +
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

447) Fraau_1988 in NC_017033


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  257 bits (960),  Expect = 8e-70, Method: Compositional matrix adjust.
 Identities = 169/403 (42%), Positives = 269/403 (67%), Gaps = 25/403 (6%)

Query  1    MPLTDTAARKAAPRDKSYRLPDGGGMYLEVMPNGSRYWRLKYRFGGKEKRLALGVYPGIS  60
            M+LTD   + A P++++Y+L+DGGGMYL + +NGS+YWR+KYRF+GKEK L++GVYP+++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   ladarkrredarrlladGIDPGAARKEAKQEATAEAGGAVTFEQVARQWLARQDVAEVTA  120
            LADAR +R +AR++LA G DPG A+KE K   + + +   TFE VAR+W          +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEK--IALQMSLKNTFEAVAREWHQ--------T  110

Query  121  NKNQW-------LLEEY---LFPSIGQRPIADITPRELLAALRETEDKGLLETARRSKIK  170
            + ++W       +++ +   +FP IG+RPIA+I P ELL ALR  E +G LE  R+ + +
Sbjct  111  KADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQR  170

Query  171  AGQVFRYAIIEGLCEADPMASLRGALKTTRNRHHAAITDPVQIGGLMRAMDGFAGTFTVR  230
             G+VFRYAI+ G  + +P + L +AL T ++ H + +T   ++  ++  + G++G++  +
Sbjct  171  CGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTAN-ELPHFLTDLAGYTGSIITK  229

Query  231  CALLLSALLFVRPGELRKAEWAEMDLDGAMWRIPGEKMKMGAPHLVPLSEQALAILRDLH  290
             A  +  L  VR  ELR A+W ++D+++ +W IP+E MKM  PH+VP SEQ +A++++L+
Sbjct  230  TATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLE  289

Query  291  GLTGHARYVFSGLRTDSRPMSENTVNTALRALGYDKATMTAHGFRSMAATRLNEMGWNAD  350
             ++ H   VF G     +P+S +++N  +  LGY K+ +T+HGFR   +T L+E G N+ 
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSA  348

Query  351  AIERQLAHAESNKVRDAYTSQAQYLPERQKMMQAW-ADYLDSL  392
             IE QLAH + N +R++Y ++AQYL  R+ MMQ W ADY+DSL
Sbjct  349  WIEMQLAHVDKNSIRGTY-NHAQYLDGRREMMQ-WYADYIDSL  389

448) amb0488 in NC_007626


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  256 bits (955),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 163/395 (42%), Positives = 262/395 (67%), Gaps = 7/395 (1%)

Query  1    MPLTDLQikaakpadkpikladGGGMFLLVTPQDQRYWRLKYRFGGKEKLLALGVYPDVT  60
            M+LTD+++K+AKP ++P KLADGGGM+LL+ +++ +YWR+KYRF+GKEK+L++GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   IKTARQLRDDAKKQLANGIDPSDARKAKKSSQLLDGPDSFENVAREWFAKNVATWAETHS  120
            +  AR+ R +A+K LA G DP++A+K  K +  +   ++FE VAREW   +   W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  SKVLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIMRYAVA  180
              +++ +E D+FP IG +PI+ I +  +L   RK+E RGA +  ++  Q  G++ RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQLAPLVF  240
            TGRA+ +P+ DL +AL+  +  HF+ LT   L  ++L  + ++ G+++ K+A Q+  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANEL-PHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRKAKWADIDLDAGSWAFHASKARKGETIEHLVPLSTQAVEILRDLHQYTGNREC  300
            VR  ELR A W DID++A  W + A   +      H+VP S Q + ++++L+  + ++  
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRP--HIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  LFPGR-DPRKPMSEAAVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDPHVIEQQL  359
            +F GR DPRKP+S  ++N  +  LGY  K  +TGHGFR    TIL EQ G ++  IE QL
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  360  AHRVPDALGRAYNRTKYIEQRRAMMQRWSDYLDTL  394
            AH   +++  +YN+++Y++ RR MMQ+ +DY+D+L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

449) Bcep1808_2451 in NC_009256


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  255 bits (953),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 175/396 (45%), Positives = 269/396 (68%), Gaps = 4/396 (1%)

Query  1    MALTDLKVRTAKPADKQQKLYDGAGLLLLITPAGGKRWIFKYRIDGKEKSLALGTYPDVS  60
            MALTD+KV+TAKP ++  KL DG+G+ LLI + G+K W  KYR+ GKEK L++G YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaeararrdsareKLAAGVDPSEakkadkraaqlaaaSSFEIVAREWFETQRGGWSEVYA  120
            LA+AR +R  AR  LAAG DP+EAKK +K A Q++  ++FE VAREW +T+ + WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GKVINCLEVDVFPRLGARPIANIDAPELLAIIRAVESRGVRETAKRVLQRSRAVFQYGIM  180
            + +I+ +E D+FP +G RPIA+I + ELL  +R +E RG  E  ++V QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCSRNPAADIDAETVLKKSTGVQHMARVKVTEIPQLMRDIDEYSGDLVTRLALRFMAL  240
            TGR   NPA+D+ +     K     H + +   E+P+++ D+  Y+G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALATPKKV---HFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTKEMIQAEWHEIDVGAAEWRVPAERMKMRDPHIVPLSRQALDVLAQLREINGQRRF  300
            T VRT+E+  A+W++ID  A  W +PAE MKM+ PHIVP S Q + ++ QL  I+ ++ +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATTLRELGYSRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E G++   +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERRKMMQHWADHLDELPRLS  395
            ++N + ++Y HA+YL  RR MMQ  AD +D L+ L+
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSELA  393

450) intB in NC_013892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  255 bits (952),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 165/409 (41%), Positives = 265/409 (65%), Gaps = 28/409 (6%)

Query  1    MKLNARQIETAKPKEKTYKLADGGGLYLEVSSRGSKYWRMKYYRPTDKKEDRLAFGVYPT  60
            M L   ++ TAKPKE+ YKLADGGG+YL +++ GSKYWRMKY      KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY--RFAGKEKMLSIGVYPD  58

Query  61   VSLadarakrdeakkLMAQGIDPKAEKKGTPTPAKV---NSFEQVARAWHASN-KRWSDS  116
            V+LADAR KR EA+K++A G DP   KK    + ++   N+FE VAR WH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  117  HRQKILRSLEQYIFPHIGARDITTLRTSQLLAPVKAIDEQDKHDIAQRLRQRITAIMRYA  176
             R+ I+ ++E+ IFP IG R I+ ++  +LL +++ ++ ++  +  +++RQR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  177  VQNDILESNPANDMTGALTTAKSRHHPALPHECLPDFLNRLSAYRGRLLTKIAVELALLT  236
            +  +  + NPA D+++AL+T+K  H P L  + LP+FL  L++Y G ++TK A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  237  FVRSSELRFARWQEIDLENSVWKIPATRQPIKGVRFSERGMKMKTDHIVPLSRQAVGLIN  296
             VR+ ELRFA+W++ID+E  +W IPA              MKMK  HIVP S Q ++L++
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  297  ALHELSGNCDVMFPSDHNSAKVMSENTVNKALRAMGYDTQTEVCGHGFRTMARGAMGESG  356
             L+ +S +  ++F + +++ K +S +++N+ +  +GY  +  + GHGFR      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  357  L---WSDDAIERQLSHIERNNVRAAYIHTSKHLDERRLMVQWWADYLDA  402
            +   W    IE QL+H+++N++R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

451) SBO_4322 in NC_007613


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (950),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 134/327 (41%), Positives = 226/327 (70%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGTGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQTVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +  + ++ L+F G +DPRKPIS + +N
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESIN  315

452) Bamb_2400 in NC_008390


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (950),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 177/392 (46%), Positives = 268/392 (69%), Gaps = 4/392 (1%)

Query  1    MALTDLKVRTAKPAEKQQKLYDGGGLLLLITPAGGKRWVLKYRVDSKEKSLALGTYPDVS  60
            MALTD+KV+TAKP E+  KL DGGG+ LLI + G+K W +KYR  +KEK L++G YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaeararrdnareKLAAGVDPSEakkadkraaqlaaaSSFEIVAREWFDTQRGGWSEVYA  120
            LA+AR +R +AR  LAAG DP+EAKK +K A Q++  ++FE VAREW +T+ + WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GKVISCLEVDVFPRLGARPIASIDAPELLAIIRTVESRGVRETAKRVLQRSRAVFQYGIM  180
            + +I  +E D+FP +G RPIA I + ELL  +R +E RG  E  ++V QR   VF+Y+I+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCARNPAADIDAETVLKKSTGVQHMARVKATEIPRLMRDIDEYSGDLVTRLALRFMAL  240
            TGR   NPA+D+ +     K     H + + A E+P+++ D+  Y+G ++T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALATPKKV---HFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTKEMIQAEWPEIDVDAAEWRVPAERMKMRDPHIVPLSRQALGVLAQLREINGQQRF  300
            T VRT+E+  A+W +ID +A  W +PAE MKM+ PHIVP S Q ++++ QL  I+ ++ +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  301  VFYS-VQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGYSRDVVERQMAHA  359
            VF +  + R  IS++++   +  +GYK+R+TGHGFR   +T L+E G++   +E Q+AH 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  360  ERNQVTAAYVHAEYLPERREMMQHWADRLDEL  391
            ++N + ++Y HA+YL  RREMMQ  AD +D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

453) lpa_00270 in NC_014125


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (949),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 160/394 (41%), Positives = 255/394 (65%), Gaps = 9/394 (2%)

Query  9    PLQDTTIRNAKAEKKPYKMPDERGLYLEVAPSGGKWWRFRYRFEGKDKRISLGIYPDVSL  68
            +L D  ++ AK+  +PYK++D  G+YL + ++G+K WR +YRF GK+K +S+G+YPDV+L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  69   KQARDRRDECRTMVANEIDPSEHRkakkaakIENAANSFEVVAREWFLKFSSSGLWSEGH  128
             +AR++R E R ++A   DP+E +K  K A   +  N+FE VAREW    + ++ WS   
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ--TKADRWSLRY  119

Query  129  ADKIIQRLERDIFPWIGNIPISDINAPKLLSVVRRIESRGALDTAHRALGNCGQIFRYAI  188
             D II+ +E+DIFP IG+ PI++I++  LL  +R++E RGAL+  ++    CG++FRYAI
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  189  ATGRAERDPSQDLRSALPPVKETHFAAVTEPKDVAKLLRALDDYEGTLIVKCALRLAPLV  248
             TGRA+ +P+ DL SAL+  K  HF+ +T +++++ +L  L +Y G++I K A ++  L 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  249  FVRPGELRSAEWEHIDFDTAEWRY--KVTKTDTLHIVPLSQQALDILKELHPQTGRDRYV  306
             VR  ELR A+WE+IDF++  W     V K    HIVP S+Q + ++K+L+P + ++  V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  307  FPSARDKKRPMSDNAILAAMRRMGINKEEMTTHGFRAMARTILDEVLQFRPDIIEHQLAH  366
            F +  D ++P+S ++I   +  +G  K  +T HGFR    TIL+E   F +  IE QLAH
Sbjct  299  FIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  367  AVRDPNGRAYNRTAHLPERKKMMQAW-ADYLDEL  399
              +++   +YN++  L  R+ MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

454) LPC_0202 in NC_009494


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (949),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 160/394 (41%), Positives = 255/394 (65%), Gaps = 9/394 (2%)

Query  9    PLQDTTIRNAKAEKKPYKMPDERGLYLEVAPSGGKWWRFRYRFEGKDKRISLGIYPDVSL  68
            +L D  ++ AK+  +PYK++D  G+YL + ++G+K WR +YRF GK+K +S+G+YPDV+L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  69   KQARDRRDECRTMVANEIDPSEHRkakkaakIENAANSFEVVAREWFLKFSSSGLWSEGH  128
             +AR++R E R ++A   DP+E +K  K A   +  N+FE VAREW    + ++ WS   
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ--TKADRWSLRY  119

Query  129  ADKIIQRLERDIFPWIGNIPISDINAPKLLSVVRRIESRGALDTAHRALGNCGQIFRYAI  188
             D II+ +E+DIFP IG+ PI++I++  LL  +R++E RGAL+  ++    CG++FRYAI
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  189  ATGRAERDPSQDLRSALPPVKETHFAAVTEPKDVAKLLRALDDYEGTLIVKCALRLAPLV  248
             TGRA+ +P+ DL SAL+  K  HF+ +T +++++ +L  L +Y G++I K A ++  L 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  249  FVRPGELRSAEWEHIDFDTAEWRY--KVTKTDTLHIVPLSQQALDILKELHPQTGRDRYV  306
             VR  ELR A+WE+IDF++  W     V K    HIVP S+Q + ++K+L+P + ++  V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  307  FPSARDKKRPMSDNAILAAMRRMGINKEEMTTHGFRAMARTILDEVLQFRPDIIEHQLAH  366
            F +  D ++P+S ++I   +  +G  K  +T HGFR    TIL+E   F +  IE QLAH
Sbjct  299  FIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  367  AVRDPNGRAYNRTAHLPERKKMMQAW-ADYLDEL  399
              +++   +YN++  L  R+ MMQ W ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

455) Pecwa_1766 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (950),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 267/414 (65%), Gaps = 30/414 (7%)

Query  1    MSLTDTKVKNAKPSEKVVKLTDGFGLYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVS  60
            M+LTD KVK AKP E+  KL+DG G+YLL+++NGSKYW++ YRF GK+K++SIGVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQRRDDAKKLLAAGIDPSAKKRADNKSVQEKRNNTRAFKTVAKSWFATKTT-WSED  119
            LADAR++R +A+K+LAAG DP+  K+ ++ ++Q   +NT  F +VA+ W  TK+  WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNT--FEAVAREWHQTKADRWSLR  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYA  179
            Y+  +   +E  +FP IG++ IAE+   +LL +++K+EK G LE   +V+Q    + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKPQTEHRPAIELEEIPTLLERIDGYQGRSRLTQLAIKLNLL  239
            +      +NPA DL +A+  P+  H P +  +E+P +L  + GY G S +T+ A ++ +L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTG-SIITKTATQIIML  237

Query  240  IFVRSSELRFARWSEIDFKSALWVIPEQREAIKGIKHSGRGAKMHRKHYVPLCDQALAIL  299
              VR+ ELRFA+W +IDF + LW IP +              KM R H VP  +Q +A++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALF  285

Query  300  EELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
             +L      ++ ++ +++ G  D+ KP+S ++IN+ +  +GY  +  L GHGFR    + 
Sbjct  286  KQLE----PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDA  410
            L E G+   W    +E+Q++H++KN++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

456) SbBS512_E4662 in NC_010658


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (948),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 134/327 (41%), Positives = 227/327 (70%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRATEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +  + ++ L+F G +DPRKPIS + +N
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESIN  315

457) intB in NC_013892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  254 bits (947),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 260/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQIETAKPKEKTYKLADGGGLYLEITSRGSKYWHMKYRRPTDKKEDRLAFGVYPI  60
            M L   ++ TAKPKE+ YKLADGGG+YL I + GSKYW+MKYR +   KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VSLadarakrdeakkLIAQGSDPKAEKRG--TQLESKGAPSFEQVAREWHASN-KRWSED  117
            V+LADAR KR EA+K++A G+DP   K+     L+     +FE VAREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HSNRILRSLEHYIFPHIGKLDISTVRTSQLLAPIKSVDADGKHDIAQRLQQRVTSIMRYA  177
              + I+ ++E  IFP IGK  I+ ++  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDILESNPANDMSGALSTVKAKHHPALPHERLPEFLTRLSHYRGRLITQIAVELTLLT  237
            +  +  + NPA D+++AL+T K  H P L  + LP+FLT L+ Y G +IT+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWEELDLENAVWKIPATRKPIEGVKFSERGMKMKTEHIVPLSRQAVSLFK  297
             VR+ ELRFA+WE++D+E  +W IPA              MKMK  HIVP S Q ++LFK
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  ILQGLSGECEVMFPHDHNPAKVMSESTVNNALRVMGYDTKTEVWGHGFRTMARGAMGESG  357
             L+ +S +  ++F   ++P K +S  ++N+ + ++GY  +    GHGFR      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLT--GHGFRHTMSTILHEQG  344

Query  358  L---WNDDAIERQLSHVERKNVRAAYIHTSKHLDERRLMVQWWADYLDA  403
            +   W    IE QL+HV+++++R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

458) SG1638 in NC_007712


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 173/409 (43%), Positives = 266/409 (66%), Gaps = 27/409 (6%)

Query  1    MKLNPRQVQTAKAKEKSYKLSDGGGMYLEVTPRGSKYWRMKYHRPSDRKEDKLSFGVYPA  60
            M L   +V+TAK+KE++YKL+DGGGMYL + + GSKYWRMKY+ ++  KE  LS+GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   ITlaearakrdeakkllakGLDPKKVQKKEHAENNGEF--TFESIARKWH-SNNRRWENV  117
            +TLA+AR KR EA+K+LA G DP   +K E    +  +  TFE++AR WH ++  RW   
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  TRNLILNSLEKYVFPIIGKNDIRQLKTRHLLAVVRAVEENGKHEVAQRIQQRITSIMRYA  177
             R+ I++++EK +FP IGK  I ++K  +LL  +R +E  G  E  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNEIIETNPALDMAGALIPPKSVHHPALAPIMLPQFFARLTSYKGRKITRIAVELNLLT  237
            +     + NPA D+A+AL  PK VH P L++  LP+F++ L++Y G  IT+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWKEIDFEHALWEIPAKREPIAGVRYSERGMKMKSSHLVPLSKQAIELLK  297
             VR+ ELRFA+W +IDFE  LWEIPA              MKMK +H+VP S Q I L+K
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKVQRGDEAHIFPGDHDIKGVMSENTVNKALRVMGYDTKTEICGHGFRTMARGAMGESG  357
            QL     +++ +F G +D +  +S +++N+ + ++GY  K  + GHGFR      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WADDVIELQMSHIERNGVKAAYLHTTKHLEERRLMMQWWADYLDA  403
            +   W    IE+Q++H+++N+++++Y H ++ L+ RR MMQW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

459) Fraau_3064 in NC_017033


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  253 bits (944),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 162/390 (42%), Positives = 264/390 (68%), Gaps = 9/390 (2%)

Query  8    LTALAIKAAEP-GKHF---DGGGMFLHITTKG-RYWRLKYRVAGKEKLLALGVYPEVSLa  62
            LT + +K+A P  + +   DGGGM+L I ++G +YWR+KYR AGKEK+L++GVYP+V+LA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  63   earkrrdearrVIGEGGDPSAIRRTTKVTAVLATANTFQAVAEEWLAQHKARMAPATYNK  122
            +AR +R EAR++++ GGDP+  ++  K++  ++  NTF+AVA EW      R +    + 
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  123  AVWMLGDLVYPWLGRRPISDIEAPELLAVLRRIEARGAHTTAHRTKQRCGQVFRYAIATG  182
             +  +   ++P +G+RPI++I + ELL  LR++E RGA    ++ +QRCG+VFRYAI TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  183  RAKRDPSADLRGALAPLNPTSRAAITDPLRVGELLRAIDGYSGTFPVICALRLAPMLFVR  242
            RA  +P++DL +ALA  +    + +T    + ++L  + GY+G++    A ++  +  VR
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTAN-ELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  243  PGELRHAEWAEFDLDQSLWRIPAEKMKMRDEHLVPLPDQALAILRDLLPLTGPDGFLFPG  302
              ELR A+W ++D++  LW IPAE MKM+  H+VP ++Q +A++++L P++  + ++F G
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  303  ERSASRPMSENTVNAALRRLGYDKDTMTGHGFRAMASTRLNELGWSPDVIERQLAHAERN  362
               + +P+S +++N  +  LGY K+ +TGHGFR   ST L+E G ++  IE QLAH ++N
Sbjct  302  RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  363  KVRAAYNRAQYLPERQRMMQAW-ADYLDSL  391
             +R++YN+AQYL  R+ MMQ W ADY+DSL
Sbjct  361  SIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

460) SSON53_18230 in NC_016822


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  253 bits (945),  Expect = 8e-69, Method: Compositional matrix adjust.
 Identities = 133/327 (41%), Positives = 227/327 (70%), Gaps = 15/327 (4%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM+LL+++NGS+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQL--SFEHIARRWHASN-KQWAQSHS  117
            L++AR KR EARK+++ G DP E K+  K+  ++ L  +FE +AR WH ++  +W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  NKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            + ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTEL  297
            R+ ELR+A+W +ID++  +W IPAE              KM+ PH+VP S Q +A++ +L
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  QTWAGENGLIFTGAHDPRKPISENVMN  324
            +  + ++ L+F G +DPRKPIS + +N
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESIN  315

461) Acife_3075 in NC_015942


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  253 bits (946),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 161/388 (42%), Positives = 254/388 (66%), Gaps = 3/388 (0%)

Query  2    LTDIKIRQAKATGKTCKLTDGRGLYLEVTPTGAKHWRYRYRIAGKENVYAMGNYPEISLQ  61
            LTD+K++ AK+  +  KL+DG G+YL + + G+K WR +YR+AGKE++ ++G YP+++L 
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   EARKAREDARDLVKQGVHPAHIRRKNQGEKEAGNAITFKKVADEWLVKKQPHWSPGYYAR  121
            +AR  R +AR ++  G +P++ ++ ++   + +   TF  VA EW   K  +WS  Y   
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  122  IKDGLEKNAYPAIGKMAIRSINSADILNIMREMEARGAETYAMHLRYWCSAVFCYAVVTL  181
            I D +EK+ +P IGK +I  I++ ++L+ +R ME RGA      +R +C+ VF YA+VT 
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  182  RADSDPAAALKGAIIRPKISHSKAMNAADIKDFLRRLDGYGGNlttiiilrlllylFVRT  241
            RAD +PA+ L +A+  PK  H   + A ++ +FL  L GY G++ T    ++++   VRT
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRT  242

Query  242  VELRKARWEEFNLEAGEWLIPAERMKKRRAHLVPLPHQAIELLKKLNAITGSGEWLFNNS  301
             ELR A+WE++++EA  W IPAE MK +R+H+VP ++Q I L+K+L++I+     +F   
Sbjct  243  QELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGR  302

Query  302  RTPGERIGFTTVNRALEYMGYPSGCWTGHDFRATASTRLHELGFASMVIERQLAHVEGNA  361
              P   I+  ++N+ +E +GY  G  TGH+FR T ST LHE GF S  IE QLAHV+ N+
Sbjct  303  NDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNS  361

Query  362  TKAAYNHAEYLQDRRIMMQAW-ADWIDA  388
             +++YNHA+YL++RR MMQ W AD ID+
Sbjct  362  IRGTYNHAQYLDGRREMMQ-WYADYIDS  388

462) int in NC_006513


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 164/390 (43%), Positives = 255/390 (66%), Gaps = 2/390 (0%)

Query  1    MQLTDKAIRGVKGGAKPVKMADGGGLYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPRVS  60
            M LTD  ++  K   +P K+ADGGG+YL + + G+K WR ++R+AGKE++++IG YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadarkardeardLVKQGFNPSHYRQQAKQAVIDENLNTFAPVADEWYQSKVDSWSKGHR  120
            LADAR  R EAR ++  G +P++ +++ K A+     NTF +VA EW Q+K D WS   R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  HHVRTILDKDILPRIGKLPIRSITSPLLHDVMKKIVARGATTRAILARQIMGSVFNLAIL  180
            +++   ++KDI+P IGK PI  I +  L + ++K+  RGA  +    RQ  G VF  AI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  THRADTNPAEPLKRQIARCVTEHHRHLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAV  240
            T RAD NPA  L   +A     H   L   ++ +FL  L++YTG   T+ A Q++MLT+V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGEVCGARWAEFDIDGQNWTIPKERMKTRKPHIVPLSNQAVDLLKELEPITGDTAFLFP  300
            R  E+  A+W ++D++++ W IP E MK ++PHIVP S+Q + L+K+LEPI+ + +++F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  SQGTKTQTMPTQSIRNAVVKLGYADKFSPHGARGTFSTMLNGRGYNSDWIERQLAHDEGN  360
            ++    + ++ +SI + +  LGY ++++ HG R T ST+L+ +G+NS WIE QLAH + N
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKN  360

Query  361  RVRASYNHMQYLPERRKMLQEW-ADLLDEL  389
             +R++YNH QYL  RR M+Q W AD +D L
Sbjct  361  SIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

463) Dsui_1791 in NC_016616


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  252 bits (943),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 167/396 (43%), Positives = 271/396 (69%), Gaps = 9/396 (2%)

Query  1    MALTELAIKASKPADKPYKVSDERGLFLLVNPNGSKYWRVKYRFLGKEKLLALGVYPEVS  60
            MALT++ +K++KP ++PYK++D  G++LL+N+NGSKYWR+KYRF GKEK+L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKQarerrddarrllaNGVDPGFHKQATKMAMVANAANSFEAVAREWWAKKSVGWSASYS  120
            L +ARE+R +AR++LA G DPG  K+  K+A+  +  N+FEAVAREW   K+  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  NKVIRLFERDVFPWVGARPIADITAPEMLAVVRRIEARGVIETAHLALRVSGQAFRYAVV  180
            + +I  FE+D+FP +G RPIA+I + E+L  +R++E RG +E  +   +  G+ FRYA+V
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRAERSPVGDLRGALPPVKVSHFAAITEPEKVGELLRAIDAFSGTFVVLCALKLAPLFF  240
            TGRA+ +P  DL +AL+  K  HF+ +T  E + ++L  + +++G+++   A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRHARWRDFDLERGEWRYL--VTKTQTQHLVPLATQAIGILRELYALTGRGDFVF  298
            VR  ELR A+W D+D+E   W     V K +  H+VP + Q I+++++L +++ +  +VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGRDRA-NPMSGATINAALRRMGYNTQTDITGHGFRAMARTILAEELHVKPEVIEHQLAH  357
             GR+ + +P+S  +IN  +  +GY+ +  +TGHGFR    TIL E+   ++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  358  RVPDNLGTAYNRTKFLKERRVMMQEW-ANYLDNLKE  392
               +++  +YN++++L  RR MMQ W A+Y+D+L E
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

464) BPC006_I1487 in NC_018527


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  252 bits (940),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 163/387 (43%), Positives = 254/387 (66%), Gaps = 8/387 (2%)

Query  1    MKNAKPAAKPYKLTDGGGMYLLVQPNGAKYWRMAYRLHGKQKLLAIGVYPAVGLATARER  60
            +K AKP  +PYKL+DGGGMYLL+++NG+KYWRM YR+ GK+K+L+IGVYP V LA ARE+
Sbjct  8    VKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREK  67

Query  61   RDDARKKVAAGIDPSAAKRVEKRVARLAASNTFEAVAHGWMNERKTVVEIGQY-EKTLAR  119
            R +ARK +AAG DP+ AK+ EK   +++  NTFEAVA+ W + +     + +Y +  +  
Sbjct  68   RSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSL-RYRDEIIDT  126

Query  120  FDSDVFPWLGKRPIAEVDAPEILTALKRIDSRGARYTAHRVRSEISRVFRYGIKEGYCKA  179
            F+ D+FP +GKRPIAE+ + E+L AL++++ RGA    ++VR   + VFRY+I  G    
Sbjct  127  FEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADY  186

Query  180  DPARDLVDAIPPAQTTHFAAITDPAKVAEMLRAFDGFSGTFPVLCALKLAPLLFVRPGEL  239
            +PA DL  A++ ++  HF+ +T +  +++ L  + G++G++    A ++  L  VR  EL
Sbjct  187  NPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQEL  245

Query  240  RQAQWAQFDLDKGEWRYL--VTKTKTEHLVPLSLQAIAILRELHALTGAGRYVFPGARDR  297
            R A+W ++D++   W     V K K  H+VP S Q IA++++L++++     VF G  D 
Sbjct  246  RFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDP  305

Query  298  NRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDNL  357
             +P+S  +IN  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLAH   +++
Sbjct  306  RKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNSI  362

Query  358  GSAYNRTKFIKKRREMMQKWADYLDCL  384
             ++YN+++++  RREMMQ  ADY+D L
Sbjct  363  RGTYNHAQYLDGRREMMQWYADYIDSL  389

465) Pecwa_0447 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  252 bits (941),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 169/408 (42%), Positives = 260/408 (64%), Gaps = 24/408 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLIS  60
            MALTDV  +TAKP+E++YKLAD+ G+YLL+++NGSK W +KYRF GKE  +++G YP ++
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREKRDEIRLLLLEGIHPTekreeekeqaqeaL-NTFAKVAQDWHRNISQNRWSETH  119
            LA AREKR E R +L  G +P E + EEK   Q +L NTF  VA++WH+    +RWS   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  AGRVWRDMERNLLPAIGHRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTDIMRYAV  179
             + +    E++++P IG R IA++K  +LLE+L+ +E+ G L+   ++RQR  ++ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QNDLIERNPAQDLSGAIAAPKATHRPALKLNKLPDFLARIERHKGrtltrlalkltlCVF  239
              +  + NPA DL++A+A+PK  H P L  N LP+FL+ +    G  +T+ A ++ +   
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELRFA+W +IDF   +W IPAE              KM+  H+VP S Q +AL+ +
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  300  IKAISGAHELIFPGDRRPTKPMSENTVNNALRTMGYDTTIEVCGHGFRTMACSALVESG-  358
            + +IS  H L+F G   P KP+S +++N+ +  +GY   +   GHGFR    + L E G 
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRL--TGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADYLDA  404
               W    +E Q++H ++N++R++Y H A+ LD RR M+QW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

466) Pecwa_1586 in NC_013421


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  252 bits (940),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 267/414 (65%), Gaps = 30/414 (7%)

Query  1    MSLTDTKVKNAKPSEKVVKLTDGFGLYLLVHPNGSKYWQLGYRFEGKQKVFSIGVYPAVS  60
            M+LTD KVK AKP E+  KL+DG G+YLL+++NGSKYW++ YRF GK+K++SIGVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQRRDEAKKLLAAGIDPSAKKQADNKIVQERRNNTRAFKTVAKSWFTTKTT-WSED  119
            LADAR++R EA+K+LAAG DP+  K+ ++  +Q   +NT  F +VA+ W  TK+  WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNT--FEAVAREWHQTKADRWSLR  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYA  179
            Y+  +   +E  +FP IG++ IAE+   +LL +++K+EK G LE   +V+Q    + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKPQTEHRPAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLL  239
            +      +NPA DL +A+  P+  H P +  +E+P +L  + +Y G S +T+ A ++ +L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTG-SIITKTATQIIML  237

Query  240  IFVRSSELRFARWSEIDFKSALWVIPEQREAIKGIKHSGRGAKMRRKHYVPLCHQALAIL  299
              VR+ ELRFA+W +IDF + LW IP +              KM+R H VP  +Q +A++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALF  285

Query  300  EELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
             +L      ++ ++ +++ G  D+ KP+S ++IN+ +  +GY  +  L GHGFR    + 
Sbjct  286  KQLE----PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDA  410
            L E G+   W    +E+Q++H++KN++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

467) YE105_C1329 in NC_015224


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  251 bits (939),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 163/384 (43%), Positives = 246/384 (65%), Gaps = 7/384 (1%)

Query  1    MKLTDTKIRNAKPQEKAYQLQDGNGLYLDVRPSGVKTWRYRYWVTPTKDGRYTIGSYPAV  60
            M LTD K++ AKP+E++Y+L DG G+YL + ++G K WR +Y+ +  K+   +IG YP V
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFA-GKEKMLSIGVYPDV  59

Query  61   SLAEARKVREWAREQVKSGIVPKEAKATERDIAKAESANTFEIVAREWMAKKWDNWSVNT  120
            +LA+AR  R  AR  + +G  P EAK  E+   +    NTFE VAREW   K D WS+  
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  121  KNQIIAFMDNDIFPAIGGMPMREINASHILKIIRELENRGAISVAVKTRQWCSAIFCYGV  180
            +++II   ++DIFP IG  P+ EI++ ++L  +R +E+RGA+    K RQ+C+ +F Y++
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  181  ATLRADSDPAAALKGAIITPKIVHSRSLTGDELRDYYLRLESYTGTRATIIALKILPLVF  240
             T RAD +PA+ L +A+ TPK VH   LT++EL ++   L +YTG+  T  A +I+ L  
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRQVELRSAEWAHIDFDNAEWVIPAELMKMRRIHRVPLSKPVLSLLHELKELTGKRRWLF  300
            VR  ELR A+W +IDF+   W IPAE+MKM+R H VP S  V++L+ +L  ++  +  +F
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  301  ---PNTRLDTFMGASTLNWAIVHMGYGRKVLTTHDFRATASTRLHEMGYRHDVIERQLAH  357
                + R    ++  ++N  I  +GY  + LT H+FR T ST LHE G+    IE QLAH
Sbjct  300  IGRNDPRKP--ISKESINQVIELLGYKGR-LTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  358  VEKNRVSAAYNHAEYMPERRELME  381
            V+KN + ++YNHA+Y+  RRE+M+
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ  380

468) W5S_1599 in NC_017845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  251 bits (939),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 166/414 (41%), Positives = 267/414 (65%), Gaps = 30/414 (7%)

Query  1    MSLTDTKVKNAKPSEKAVKLTDGFGLYLLVHPNGSKYWQLGYRFQGKQKVFSIGVYPAVS  60
            M+LTD KVK AKP E++ KL+DG G+YLL+++NGSKYW++ YRF GK+K++SIGVYP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARQRRDEAKKLLAAGIDPSAKKQADNKIVQERRNNTRAFKTVAKSWFATKTT-WSED  119
            LADAR++R EA+K+LAAG DP+  K+ ++  +Q   +NT  F +VA+ W  TK+  WS  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNT--FEAVAREWHQTKADRWSLR  118

Query  120  YQRSVWTRLETYLFPDIGNKDIAELDTGDLLVPIKKIEKLGYLEIAMRVKQYATAIMRYA  179
            Y+  +   +E  +FP IG++ IAE+   +LL +++K+EK G LE   +V+Q    + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  180  VQQKMIRFNPAYDLEGAVQKHQTEHRPAIELEEIPTLLERIEAYKGRSRLTQLAIKLNLL  239
            +      +NPA DL +A+   +  H P +  +E+P +L  + +Y G S +T+ A ++ +L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTG-SIITKTATQIIML  237

Query  240  IFVRSSELRFARWSEIDFKSALWVIPEERETIEGIKHSGRGAKMRRKHYVPLCNQALAIL  299
              VR+ ELRFA+W +IDF + LW IP E              KM+R H VP  +Q +A++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALF  285

Query  300  EELKDLTYDVNGDDGFILTGCYDAMKPMSENTINKALRKMGYDTKTDLCGHGFRTLACSA  359
             +L      ++ ++ +++ G  D+ KP+S ++IN+ +  +GY  +  L GHGFR    + 
Sbjct  286  KQLE----PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTI  339

Query  360  LIESGI---WPEDVVELQMSHMEKNNVRAAYTHKAKHLEQRRLMLQWWADFLDA  410
            L E G+   W    +E+Q++H++KN++R++Y H A+ L+ RR M+QW AD++D+
Sbjct  340  LHEQGFNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

469) W5S_0459 in NC_017845


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  251 bits (937),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 171/408 (42%), Positives = 261/408 (64%), Gaps = 24/408 (5%)

Query  1    MALTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKRWYLKYRFEGKESRIAFGAYPLVS  60
            MALTDV  +TAKP+E++YKLAD+ G+YLL+++NGSK W +KYRF GKE  +++G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKAREKRDEIRLLLLEGIHPTekreeekeqaqeaL-NTFEKVAQDWHRNISQNRWSETH  119
            LA AREKR E R +L  G +P E + EEK   Q +L NTFE VA++WH+    +RWS   
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSLRY  119

Query  120  AGRVWRDMERNLLPAIGHRHIADLKTKDLLEPLKVVEQNGHLDLASRLRQRVTDIMRYAV  179
             + +    E++++P IG R IA++K  +LLE+L+ +E+ G L+   ++RQR  ++ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  180  QNDLIERNPAQDLSGAIAAPKATHRPALKLNTLPDFLARIERHkgraltrlalkltlCVF  239
              +  + NPA DL++A+A+PK  H P L  N LP+FL+ +    G  +T+ A ++ +   
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  240  IRSSELRFARWPEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRSEHLVPLSRQALALLEE  299
            +R+ ELRFA+W +IDF   +W IPAE              KM+  H+VP S Q +AL+ +
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  300  IKAISGAHELIFPGDRRPTKPMSENTVNNALRTMGYDTTTEVCGHGFRTMACSALVESG-  358
            + +IS  H L+F G   P KP+S +++N+ +  +GY     + GHGFR    + L E G 
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  359  --QWSRDAVERQMSHQERNGVRAAYIHKAEHLDERRLMLQWWADYLDA  404
               W    +E Q++H ++N++R++Y H A+ LD RR M+QW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

470) intB in NC_014228


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  251 bits (937),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 261/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQIETAKPKEKTYKLADGGGLYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPV  60
            M L   ++ TAKPKE+ YKLADGGG+YL I + GSKYWRMKYR +   KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VSLadarakrdeakkLIAQGSDPKAEKKGAQTESKGA--PSFEQVAREWHASN-KRWSED  117
            V+LADAR KR EA+K++A G+DP   KK  +   + +   +FE VAREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HSNRILRSLEHYIFPHIGRLDISTLRTSQLLAPIKSVDADGKHDIAQRLQQRVTSIMRYA  177
              + I+ ++E  IFP IG+  I+ ++  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDILESNPANDMSGALSTVKAKHHPALPHERLPEFLTRLSHYRGRLITQIAVELTLLT  237
            +  +  + NPA D+++AL+T K  H P L  + LP+FLT L+ Y G +IT+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWEELDLENAVWKIPATRKPIEGVKFSERGMKMKTEHIVPLSRQAVSLFK  297
             VR+ ELRFA+WE++D+E  +W IPA              MKMK  HIVP S Q ++LFK
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  ILQGLSGECEVMFPHDHNPAKVMSESTVNNALRGMGYDTKTEVCGHGFRTMARGAMGESG  357
             L+ +S +  ++F   ++P K +S  ++N+ +  +GY  K  + GHGFR      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WNDDAIERQLSHVERKNVRAAYIHTSKHLDERQLMVQWWADYLDA  403
            +   W    IE QL+HV+++++R++Y H ++ LD R+ M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

471) ECA0835 in NC_004547


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  251 bits (936),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 156/388 (41%), Positives = 246/388 (64%), Gaps = 2/388 (0%)

Query  34   PLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQVPGTSKRTMISLGAYPAL  93
            +LT+  V+ AK+ ++   L DG+G++LL+++ G K WR +Y+ +G  K  M+S+G YP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEK--MLSIGVYPDV  59

Query  94   SLADAREVRSEKLAILVKGIDPQARAGEEAEKLQIAQESIFVNVARKWFELKQSHVSADH  153
            +LADARE RSE   IL  G DP     EE   LQ++  + F  VAR W + K  + S   
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  154  AKDIWRSIEKDILPSIENVPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIYAV  213
              +I  ++EKDI+P I + PI E+K+  L++ L  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  214  NVGLIEANPASGIGNAFERPKKQHMPIIRPEELPKLMRTISMSNLSIPTRCLLEWQLLTL  273
              G  + NPA+++++A+  PKK H P++ ++ELP ++  ++    SI T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  274  IRPAEASATAWSEIDIENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQYVF  333
            +R  E   + W +ID+E K W IPAE MK KR HIVP SEQ + L+  + PIS ++  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  334  PSRNDPRKPMNSQTANAALKRIGYSGKLVAHGLRSIASTAMNEAGFNADVIEAALAHSDK  393
             +RNDPRKP++ ++ N  +  +GY G+L +HG+R   ST ++E GFN+  IE  LAH DK
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  394  NEVRRAYNRSTYLTQRVELLGWWGEFVN  421
            N +R +YN++ YL  R E++ W +++++
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYID  387

472) Nmul_A2184 in NC_007614


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  249 bits (931),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 166/392 (43%), Positives = 256/392 (66%), Gaps = 5/392 (1%)

Query  1    MALTDTAIRNTKSADKPLKLTDERGLYLLLKPNGSRWWRFDYRYGGKRKTLSMGVYPDVS  60
            MALTD  ++ +K+ ++P KL+D  G+YLL+++NGS+ WR  YR++GK K LS+GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKDARNRRDEARKLLASDVDPGENRKAVKAAKLEKTTNSFEVITREWYAKFSPTWNESHG  120
            L DAR++R EARK+LA++ DPGE +K  K A      N+FE ++REW    +  W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  eriirrferdifPWIGSKPISEIAAPELLATVRRIESRGAVETAHRALGNCGQVFRYAIA  180
            + II  FE+DIFP IG +PI+EI + ELL ++R++E RGA+E  ++    CG+VFRYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TARATRDISADLRGALPPVKGEHFAAITEPKQVGALLRAIDGYTGSHVVRCALRLAPLVF  240
            T+RA  + ++DL +AL+  K  HF+ +T ++++  +L  + GYTGS + + A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRKAEWKDIDLDGGEWRYT--VTKTNTPHIVPLSTQAVEILKELQALTGRSRFVF  298
            VR  ELR A+W DID+++  W     V K + PHIVP S Q + ++K+L++++ +  +VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARTNGRPMSDNAILAALRRMGIDKEEMSGHGFRAMARTILDEVLGVRPDFIEHQLAHS  358
             G     +P+S ++I   +  +G  K  ++GHGFR    TIL+E  G  +  IE QLAH 
Sbjct  300  IGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHV  357

Query  359  VRDPNGRAYNRTAHLPERRKMMQQWADYLDKL  390
             +++   +YN++  L  RR MMQ  ADY+D L
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

473) Ent638_3101 in NC_009436


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  249 bits (931),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 248/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPNSTSRTNLSLGAYPAL  66
            +LT+  +  AKP+E+ + L DG+G++LL++++G K WR +Y+ +       LS+G YP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKM--LSIGVYPDV  59

Query  67   TLAAARLIRDQHLSLLAQDIDPqqqqeivseqrqiKLDSVFSTVAANWFQLKSKSVTPDY  126
            TLA AR  R +   +LA + DP + +       Q+ L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLDKDVFPAIGEIPVQEIKARTIIEALEPIKARGALETVRRLVQRINEIMIYAV  186
              +I  +++KD+FP IG  P+ EIK+  ++EAL  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLLDANPASGVGMAFERPKKQNMLTLRPEELPKLMRSIGMSNLSVPTRCLIELQLLTL  246
             TG  D NPA++++ A+  PKK +   L ++ELP ++  ++    S+ T+   ++ +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGARWAEIDIDAKLWKIPAERMKAKREHIVPLSPQALEILEIMTPISAHREYVF  306
            VR  E   A+W +ID++AKLW IPAE MK KR HIVP S Q + ++  + PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPKQPMNSQTANAAIKRIGYGGRLVAHGLRSIASTAMNEEGFNPDVIEAALAHSDK  366
             +RNDP++P++ ++ N  I  +GY GRL +HG+R   ST ++E+GFN+  IE  LAH DK
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLEARRELMDWWGSAI  393
            N +R +YN++ YL++RRE+M+W +  I
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

474) ECL_03606 in NC_014121


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  249 bits (929),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 251/393 (64%), Gaps = 7/393 (1%)

Query  19   MPLTDTKIRNAKPQERPYSLQDGQGLYLDVRPTGAKIWRYRFWITPKKDGRYTIGEYPGV  78
            M+LTD K++ AKP+ERPY L DG G+YL + + G+K WR +++++ K +   +IG YP+V
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGK-EKMLSIGVYPDV  59

Query  79   SLadarrerewareQVKQGKNPTIVKDTEKLMVMGDAENTFKSIAEEWYERKCQTWAE--  136
            +LADAR  R  AR  +  G +P   K  EK+ +     NTF ++A EW + K + W+   
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  137  KTQIVNRGFLDKHILPSIGKIPVKDIKAAHILALMLSLEKAGNAYSAGKVRQICSAVFCY  196
            + +I++   ++K+I+P IGK P+ +IK+ ++L  +  +EK G      KVRQ C+ VF Y
Sbjct  120  RDEIIDT--FEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  197  AVATLRAEVDPSYALRGAVMQKPTTHARPATTGELRQLFVALRNYKSPVMV-ICIKMLVM  255
            A+ T RA+ +P+  L +A+      H    T+ EL +++  L  Y ++++     +++++
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  256  TFVRQQELRFARWEDISFEKAEWIIPKEVMKKRREHRVPLCEHVISLLEELKPLTGDKEY  315
            T VR QELRFA+WEDI FE   W IP EVMK +R H VP  E+VI+L+ +L P++ +   
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  316  LFPSPSKAGQPIAKTTINRAIEYQGFASGEITGHDFRATASTALYEQGFRPEVIEAQLAH  375
            +F + + + +PI+K +IN+ IE  G+  G +TGH+FR T ST L EQGF +  IE QLAH
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  376  QQKNRVAAAYNHAEYMKERREMMEWWGGVIADL  408
             +KN + ++YNHA+Y+  RREMM+W ++ I  L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

475) A464_4477 in NC_021870


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  249 bits (928),  Expect = 4e-67, Method: Compositional matrix adjust.
 Identities = 167/408 (41%), Positives = 259/408 (64%), Gaps = 26/408 (6%)

Query  1    MALTDRAIVHAKPCGKPYKLSDSHGLYLLVNPNGSKRWYIKYRFVNKEKKLALGPYPLLT  60
            MALTD  +  AKP  +PYKL+D+ G+YLL+N+NGSK W +KYRF  KEK L++G YP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARRMREEAQLLLISGIDPSAHRKAER--LAITPEHTFESVAREWVTSNVN-WSAEHK  117
            LA+AR  R EA+ +L +G DP+  +K E+  L ++  +TFE+VAREW  ++ + WS   +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  KRVLRYFELYVFPTNGSCDITKMKVKNLLVPIKEVEKAGKLDVASRLQQRTACVMRYAVQ  177
              ++  FE  +FP  G   I+ +K  +LL +++ +EK G L+   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  NGIIDHNPASDLTGAVSTPKVRHHPALDLNLIPDFLERIDDYKGRqltqlavklalllFI  237
             G  D NPA+DL++A++TPK  H P L  N +P+FL  + +Y G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWDEIDLRNAMWTIPAEREPIPGVKYSVRGAKMHSPHLVPLSRQAIELLHEV  297
            R+ ELRFA+W++ID+   +W IPAE              KM  PH+VP S Q I L+ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  RQHCRPGTELVFPGDHNYRKPMSENTINKALRLMGYDTQKDVCGHGFRTMACSALVESGL  357
                +    LVF G ++ RKP+S ++IN+ + L+GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHP-LVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  358  ---WSSDAVERQMSHQERKRVRAAYIHKAQHLEERREMMQWWADYLDA  402
               W    +E Q++H +++ +R++Y H AQ L+ RREMMQW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

476) intB in NC_014228


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  248 bits (927),  Expect = 3e-67, Method: Compositional matrix adjust.
 Identities = 166/409 (41%), Positives = 260/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQIEAAEPKEKTYKLADGGGLYLEITSRGSKYWRMKYRRPTDKKEDRLAFGVYPV  60
            M L   ++ +A PKE+ YKLADGGG+YL I + GSKYWRMKYR +   KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VSLadarakrdeakkLIAQGADPKAEKKGAQAESKGA--PSFEQVAREWHASN-KRWSED  117
            V+LADAR KR EA+K++A G+DP   KK  +   + +   +FE VAREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HSNRILRSLEHYIFPHIGKLDISTLRTSQLLAPIKSVDADGKHDIAQRLQQRVTSIMRYA  177
              + I+ ++E  IFP IGK  I+ ++  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDILESNPANDMSGALSTVKAKHHPALPHERLPEFLTHLSHYRGRLITQIAVELTLLT  237
            +  +  + NPA D+++AL+T K  H P L  + LP+FLT+L+ Y G +IT+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWEELDLENAVWKIPATRKPIEGVKCSERGMKMKTGHIVPLSRQAVSLFK  297
             VR+ ELRFA+WE++D+E  +W IPA              MKMK  HIVP S Q ++LFK
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  TLQDLSGECEVMFPHNHNLAKVMSESTVNNALRGMGYDTKTDVCGHGFRTMARGAMGESG  357
             L+ +S +  ++F   ++  K +S  ++N+ +  +GY  +  + GHGFR      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  358  L---WNDDAIERQLSHVERKNVRAAYIHTSKHLDERQLMVQWWADYLDA  403
            +   W    IE QL+HV+++++R++Y H ++ LD R+ M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

477) NMBM01240355_1501 in NC_017517


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  247 bits (922),  Expect = 6e-67, Method: Compositional matrix adjust.
 Identities = 152/361 (43%), Positives = 234/361 (65%), Gaps = 0/361 (0%)

Query  1    MYLYVNTGGGKLWRFDFSHNGKRKTLSIGKYPTVSLVEARQTAENARRLLAAGQDPGEAK  60
            MYL +N+ G+K WR  +   GK K LSIG YP V+L +AR+   +AR++LAAG DPGEAK
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   QQEKRERQAAVSNTFRSIAAEWHKHRETGLTGNHAARVWDSLKKDVFPMLGGLPVSEIKV  120
            ++EK   Q ++ NTF ++A EWH+ +    +      + D++ KD+FP +G  P++EIK 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  121  SQVKEVIEAVAARGALETAGRILQRIKAVFTYAIQTERAENNPAVPLVGLIKAPKQKHQP  180
             ++ E +  +  RGALE   ++ QR   VF YAI T RA+ NPA  L + + +PK+ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  181  ALPQSELTEFYRRLMLEQAERQTKIAMQLIMLTFVRNGELRAAEWVEFDLNGAEWSIPAA  240
             L  +EL +F   L    +   TK A Q+IMLT VR  ELR A+W ++D+++  W IPA 
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  241  KMKMKAPHIVPLADWTLELLAELKEITGHSRYLFPSVKDPDKHMSENILSYLMGRMGYKG  300
             MKMK PHIVP ++  + L+ +L  I+ H   +F + +DP K +S + ++ ++  +GYKG
Sbjct  266  VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKG  325

Query  301  IATPHGFRSLATDVLNENGFDSDVIERQLAHVEQNKVRAAYHRTEYIPQRKELMQWYSDC  360
              T HGFR   + +L+E+GF+S  IE QLAHV++N +R++Y++++Y+  R+E+MQWY+D 
Sbjct  326  RLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADY  385

Query  361  L  361
            +
Sbjct  386  I  386

478) SBO_4174 in NC_007613


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  246 bits (919),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 170/409 (42%), Positives = 265/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPT  60
            M L   +V TAKPK++ YK+ADGGG+YL ++A+GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTlaqarakrdqakkllaqGIDPKAEQKEAQA--ENSGAYSFETIAREWHASN-KRWSED  117
            VTLA+AR KR +A+K+LA G DP   +KE +   + S   +FE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I ++K  +LL +++K++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLT  237
            +  +  D NPA+D+A+AL+T K  H+P L ++ +P+FL+ LA+Y G ++T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVQLSRQAMILLN  297
             VR+ ELRFA+W+++DF+  LW +PA              MKMK  HIV  S Q + L++
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            QL  IS +  L+F G +D+ K +S +++N  +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSEDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLQA  403
            +   W    IE QL+H ++N++R++Y H ++ LD RR M+QW ADY+++
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

479) NMV_0809 in NC_017501


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 153/361 (43%), Positives = 235/361 (66%), Gaps = 0/361 (0%)

Query  1    MYLYVNTSGGKLWRFDFSHNGKRKTLSIGKYPTVSLLEARQTSENARRLLAAGQDPGEAK  60
            MYL +N++G+K WR  +   GK K LSIG YP V+L +AR+   +AR++LAAG DPGEAK
Sbjct  26   MYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAK  85

Query  61   QQEKRERQAAVSNTFRSIAAEWHKHCETGLTGNHAARVWDSLEKDVFPMLGGLPVSEIKV  120
            ++EK   Q ++ NTF ++A EWH+      +      + D++EKD+FP +G  P++EIK 
Sbjct  86   KEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP  145

Query  121  SQVKEVIEAVAARGALETAGRILQRIKAVFTYAIRTERAENNPAVPLVGLIKAPKQKHQP  180
             ++ E +  +  RGALE   ++ QR   VF YAI T RA+ NPA  L + + +PK+ H P
Sbjct  146  MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP  205

Query  181  ALPQSELTEFYRRLMLEQAERQTKIAMQLIMLTFVRNGELRAAEWVEFDLNGAEWSIPAA  240
             L  +EL +F   L    +   TK A Q+IMLT VR  ELR A+W ++D+++  W IPA 
Sbjct  206  FLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAE  265

Query  241  KMKMKAPHIVPLADWTLELLAELKEITGHSRYLFPSVKDPDKHMSENILSYLMGRMGYKG  300
             MKMK PHIVP ++  + L+ +L  I+ H   +F + +DP K +S + ++ ++  +GYKG
Sbjct  266  VMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKG  325

Query  301  IATPHGFRSLATDVLNENGFDSDVIERQLAHVEQNKVRAAYHRTEYIPQRKELMQWYSDC  360
              T HGFR   + +L+E+GF+S  IE QLAHV++N +R++Y++++Y+  R+E+MQWY+D 
Sbjct  326  RLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADY  385

Query  361  L  361
            +
Sbjct  386  I  386

480) VAPA_1c46740 in NC_022247


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  245 bits (916),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 166/395 (43%), Positives = 267/395 (68%), Gaps = 7/395 (1%)

Query  1    MALTDTFVRQVKPTGKANGDKYADGAGMYLLVKTAG-KYWRMDYTFAGKRKTLALGTYPE  59
            MALTD  V+  KP  ++   K ADG+GMYLL+++ G KYWRM Y FAGK K L++G YP+
Sbjct  1    MALTDVKVKTAKPKERPY--KLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  60   VSlakardrraaarellaDGTDPSAAKREKKRALADAAANTFETVAREWLGKTAAKRASG  119
            V+LA AR++R+ AR +LA G DP+ AK+E K AL  +  NTFE+VAREW    A +++  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  120  TQLKVKTWLEKDVLPFIGKMPMSTIGPRDILERVVRKLEARGAIDTAHRVKQLCGQVFRF  179
             +  +   +EKD++P+IGK P++ I P ++LE  +RK+E RGA++  ++V+Q CG+VFR+
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLE-ALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  180  AVVSGLAERDVTADLSEALASKATKHFAAITEPKRVGDLMRSIHAYSGHPTTVAALKLSP  239
            A+V+G A+ + ++DL+ ALA+    HF+ +T ++ + +++  + +Y+G   T +A ++  
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  240  LLFVRPGELRTAEWAEIDLDAAEWRIAGPKMKMKVDHVVPLATQAVEILRNLHPITGHGR  299
            L  VR  ELR A+W +ID++A  W I++  MKMK  H+VP + Q + ++++L+PI+ H  
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  300  FVFPSIRTGERPMSENTINAALRGMGYSAEVHTAHGFRATARTIMDEVLGERVDFIEHQL  359
            +VF +     +P+S ++IN  +  +GY + + T+HGFR T  TI++E  G     IE QL
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRL-TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  360  SHVVRDTNGRAYNRTAHLPARREMMQRWADYLDKL  394
            +HV +++   +YN++  L +RREMMQ+ ADY+D L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

481) Vapar_2301 in NC_012791


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  245 bits (916),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 162/397 (41%), Positives = 252/397 (64%), Gaps = 14/397 (3%)

Query  2    LTDTFVRQVKHKGSEIGERYADGGGMYLRVKAAG-KYWRMDYRFNGKAKTLALGVYPAVS  60
            LTD  V+  K K      + ADGGGMYL ++A G KYWRM YRF GK K L++GVYP V+
Sbjct  3    LTDVKVKTAKPKERPY--KLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAKARQRRDKARELLADNVDPGLAKRAEKLSRAVEAANTFEALAREFHATKASSWSASYS  120
            LA AR++R  AR +LA   DPG AK+ EK++  +   NTFEA+ARE H TKA  WS  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  ERWMRIMDKDLFPYIGKLPIATIQAKDLLHALKRAESRGVIETAHTLRQCAGQVFRYGVQ  180
            +  +   +KD+FPYIGK PIA I++ +LL+AL++ E RG +E  + +RQ  G+VFRY++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCASNPAPDLHGALRPVITKSMAAVLEPQKVGELMRAIYGYSGQPITRAALLLSALLF  240
            TGR   NPAPDL +AL +   K   + L ++ + +++  + GY+G  IT++A  +  L  
Sbjct  181  TGRADYNPAPDLASAL-ATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  QRPGNIRAMEWAWIDLDKAMLTIPAQDMKRRLHEKRNGRPHFVPLAKQALQTLEEIAPLT  300
             R  ++R  +W  ID++  +  IPA+ MK +       RPH+VP + Q +  + ++ P++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMK-------RPHIVPPSEQVIALFKQLEPIS  292

Query  301  GHGRYVFPSIRTGERPMSENTVNAALRRLGYTNDEMTAHGFRAMARTVMAEQLHGISPDV  360
             H   VF +     +P+S +++N  +  LGY ++ +T+HGFR    T++ EQ  G+++  
Sbjct  293  KHHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ--GFNSAW  349

Query  361  IEAQLAHGKSGPLGAAYDRAEFMDKRKDMMQRWADYL  397
            IE QLAH    ++ ++Y++A+++D R++MMQ+ ADY+
Sbjct  350  IEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYI  386

482) Bamb_1839 in NC_008390


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  244 bits (912),  Expect = 5e-66, Method: Compositional matrix adjust.
 Identities = 160/395 (41%), Positives = 259/395 (66%), Gaps = 5/395 (1%)

Query  1    MPLTDIKIRQAKAGNKPTKLTDGNGLYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTS  60
            M+LTD+K++ AK+ ++P KL+DG G+YLL++++GSK WR KYR+AGKE++++IG YP  +
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LQAARVARDDARELVKKGLHPSHARQEVLSARINEGKATFRAVSDEWLEKKRKTWTERHF  120
            L  AR  R +AR ++  G +P++A++E   A     K TF AV+ EW + K   W+ R  
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  GEILRMLEADAYPYIGNRPMRSITAHDVLALMRRVEKRGSPSVAIKLRQYVSNVFQYAVI  180
            +EI+  +E D +PYIG+RP+  I + ++L  +R++EKRG+     K+RQ  ++VF+YA++
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TLRADTDPASVLRGAVLKPPTEHARPLSREELKALFRQLPLYKSKRTT-IAIRLLMMLFP  239
            T RAD +PA+ L +A+  P   H   L+ +EL  ++ +L+ Y +   T  A +++M+   
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  240  RTVELCRARWEEIDLAAAEWRVPPEKIKSRRLHIVPLPTQAISLLRELQEIHGNRGYILP  299
            RT EL  A+WE+ID+ A  W +P+E +K +R HIVP + Q I+L+++L+ I  ++   L 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP--LV  298

Query  300  ILHSNRKRPHMSRATINRALDSMMPNNPEPITGHDFRATASTNLHEMGWKDEVVEMQLSH  359
            ++  N  R  +S+ +IN+ ++ +       +TGH+FR T ST LHE G +   +EMQL+H
Sbjct  299  FIGRNDPRKPISKESINQVIELL--GYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  360  KDKDRTRSTYNHAKYLPERREMMQSWADWLSDVEN  394
             DK+  R+TYNHA+YL  RREMMQ  AD +  + +
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

483) M301_1146 in NC_014207


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  243 bits (908),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 159/392 (41%), Positives = 255/392 (66%), Gaps = 8/392 (2%)

Query  8    LTDIKVKTAKPKEKPYKLAAGRGLHLLVKTDGSKHWQFRFRFDGKENTLAIGRYPEVSLA  67
            LTD+KVKTAKPKE+PYKLA G G+ LL++++GSK W+ ++RF GKE+ L+IG YP+V+LA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  68   NAEKKATSSLELLAEGINPSENKKAAKASKTGALANSFEVLAREWAISYFTNKSASHKER  127
            +A  K + +  +LA G +P+E KK  K +   +L N+FE +AREW  +     S   ++ 
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  128  TVRRLESYIFPWLGNKPISEITAPQILEVIKRIENLNKLETAHRTMQAASQIFRHAVQTG  187
             +  +E  IFP +G++PI+EI + ++LE ++++E+   LE  ++  Q  +++FR A+ TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  188  RALRDPTIDLRGALPAPVVKHMAAFTEPKEIAELLRAIDGFTGSFTVQCALRLSPLVFTR  247
            RA  +P+ DL +AL++P   H  +F  ++E++++L  + G+TGS+  + A ++  L   R
Sbjct  183  RADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  248  PSELRMAKWADIDLEANEWRYL--VTKTKTMHLVPLSKQAAKLFTDLKAVSGHGEYVFQN  305
              ELR A W DID+EA+ W     V K K  H+VP S Q   LF +L ++S H   VF  
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  306  GHDPKKPMSPAAINAALKRMGYDTQKDITAHGFRAMARTILHERLNIDPYIIEHQLAHKV  365
             +DP+KP+S  +IN  +  +GY  +  +T+HGFR    TILHE+  +++  IE QLAH  
Sbjct  302  RNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  366  PDALGAAYNRTKFIEQRTAMMQAW-ADYLDEL  396
             +++ ++YN++++++ R  MMQ W ADY+D L
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

484) CFSAN001992_19740 in NC_020307


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  243 bits (907),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT+  V  AK+ E+   L DG+G++L+++++G K WR +Y R A K++ M+++G +P +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEK-MLSIGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            +LADAR  R++   +LA G DP           Q++L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
              +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG  D NPA++++ A+  PKK + P L ++ELP ++  L     S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            VR  E   A+W +ID+ AKLW IPAE MK KR HIVP S Q + ++  + PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
             +RNDP++P++ ++ N  +  +GY G+L +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ YL+ R+E+M W +++I
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

485) SNSL254_A2952 in NC_011080


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  243 bits (907),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT+  V  AK+ E+   L DG+G++L+++++G K WR +Y R A K++ M+++G +P +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEK-MLSIGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            +LADAR  R++   +LA G DP           Q++L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
              +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG  D NPA++++ A+  PKK + P L ++ELP ++  L     S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            VR  E   A+W +ID+ AKLW IPAE MK KR HIVP S Q + ++  + PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
             +RNDP++P++ ++ N  +  +GY G+L +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ YL+ R+E+M W +++I
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

486) SN31241_38450 in NC_021902


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  243 bits (907),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 155/387 (41%), Positives = 249/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT+  V  AK+ E+   L DG+G++L+++++G K WR +Y R A K++ M+++G +P +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEK-MLSIGVYPDV  59

Query  67   SLADARGLRADYLALLANGIDPqiqaevveeqqqiaLDSIFSTVAANWFQLKSKSVTPDY  126
            +LADAR  R++   +LA G DP           Q++L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
              +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG  D NPA++++ A+  PKK + P L ++ELP ++  L     S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVF  306
            VR  E   A+W +ID+ AKLW IPAE MK KR HIVP S Q + ++  + PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEK  366
             +RNDP++P++ ++ N  +  +GY G+L +HG+R   ST ++E G+NS  IE  LAH++K
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLERRKELMSWWGNFI  393
            N +R +YN++ YL+ R+E+M W +++I
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

487) bgla_1g31710 in NC_015381


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 164/393 (42%), Positives = 252/393 (65%), Gaps = 6/393 (1%)

Query  1    MPLTDTAIRNAKPADKPVRLFDGGGLYLEIAPSGGKWWRLKYRFGGKEKRYSLGVYPDVT  60
            M+LTD  ++ AKP ++P +L DGGG+YL I ++G+K WR+KYRF+GKEK  S+GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAIARKKRDEAREKLAAGIDPGEAKKAEKRASLLAAAHSFEVVARGWMAERKTTVEPAQH  120
            LA AR KR EAR  LAAG DPGEAKK EK A  ++  ++FE VAR W   +        +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DKTLARMENDVFPWLGKRPIAEIDAPEILVVLKRVDGRGARFTAHRIRSEISRVFRYGIK  180
            D  +   E+D+FP +GKRPIAEI + E+L  L++++ RGA    +++R   + VFRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  EGHCKADPARDLVDAIPPAQTTHFASITEPEKVAEMLRAFDGFTGTFPVLCALRLAPMLF  240
             G+   +PA DL  A++ ++  HF+ +T  E +++ L  + G+TG++    A ++  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRKAQWSQFELDKGEWRYF--VNKTKTDHLVPLATQAVAILRELHALTGDGVYVF  298
            VR  ELR A+W +++++   W     V K K  H+VP + Q +A++++L++++ +   VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARDRNRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEEKPEVIEHQLAH  358
             G  D  +P+S  +IN  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  TVPDSLGRAYNRTKFIKARRSMMQQWADYLDKL  391
               +S+  +YN+++++ +RR MMQ  ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

488) ETAE_2742 in NC_013508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 156/387 (41%), Positives = 246/387 (64%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPAL  66
            +LT+  V  AK+ E+   L DG+G++L+++++G K WR +Y R A K++ M+++G +P +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEK-MLSIGVYPDV  59

Query  67   SLADARGLRADYLALLANEIDPqiqaevaeeqqqiaLDSIFSTVAANWFQLKSKSVTPEY  126
            +LADAR  R++   +LA   DP           Q++L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLEKDVFPAIGELPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAV  186
              +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLIDTNPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTL  246
             TG  D NPA++++ A+  PKK + P L ++ELP ++  L     S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGARWSEIDLDAKLWTIPAERMKAKREHIVPLSTQALDILEVMKPISAHREHVF  306
            VR  E   A+W +ID++AKLW IPAE MK KR HIVP S Q + ++  + PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTSMNEAGFNSDVIEAALAHIDK  366
             +RNDP++P++ ++ N  +  +GY G+L +HG+R   ST ++E GFNS  IE  LAH+DK
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRRAYNRSTYLQKRIELMSWWGALI  393
            N +R +YN++ YL+ R E+M W +  I
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

489) Tint_0383 in NC_014153


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  242 bits (904),  Expect = 2e-65, Method: Compositional matrix adjust.
 Identities = 157/392 (41%), Positives = 264/392 (68%), Gaps = 6/392 (1%)

Query  6    LTDAALRRAKPTDKlqrlrdgdglylllrpdgKRWWRFDYRYGGKDKTLSVGVYPDVTLA  65
            LTD  ++ AKP ++  +L DG+G+YLL+ ++G + WR  YR++GK+K LS+GVYPDVTLA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  66   RARQRADEIRQQLLDGIDPSIARKAKVTGVVAGEVSDSFEIIAREWHAGRAPTLSGNTSK  125
             AR++  E R+ L  G DP+ A+K    ++  + + ++FE +AREWH  +A   S     
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMS-LKNTFEAVAREWHQTKADRWSLRYRD  121

Query  126  NILLRLQNNAFPYIGQKSVRELRAPDVLDVLRRIEERGLGETARRVHQLIAQVMRYAVAT  185
            +I+  ++++ FPYIG++++ E+++ ++L+ LR++E RG  E  R+V+Q  ++V RYA+ T
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  186  GRADADPTPALRGALKPVMVRHHAAVIEPAELGAMLRAFDGYTGGVVVRTALQLQVMLFV  245
            GRAD +P+P L +AL     + H + + + EL   L  + GYTG+++ +TA Q+ ++  V
Sbjct  182  GRADYNPAPDLASALATPK-KVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  246  RPGELRHMEWAELDLGGAQWRIPGEKMKMREPHIVPLPRQAVALLKDLQPFSCRSRYVFP  305
            R  ELR  +W ++D+ +  W IP+E MKM+ PHIVP + Q +AL+K+L+P+S +   VF 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  306  SPRSKDRPMSENAVNVALRTLGYDRDTVTGHGFRATARTILDEKLRYRVEVIEMQLAHAV  365
            +     +P+S +++N  +  LGY ++ +TGHGFR T  TIL+E+  +    IEMQLAH  
Sbjct  301  GRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVD  358

Query  366  RDPLGRAYNRTKYLEERKDMMQAW-ADYLGKI  396
            ++++  +YN+++YL+ R++MMQ W ADY++ +
Sbjct  359  KNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

490) SJA_C1-03340 in NC_014006


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  242 bits (902),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 168/406 (42%), Positives = 258/406 (64%), Gaps = 27/406 (6%)

Query  1    MALSSLALSKAKPREKPYKLADGHGLYLLITPGGGRYWRMNYRFGGKAKTMAMGVFPLIT  60
            MAL+ + +  AKP+E+PYKLADG G+YLLI + G++YWRM+YRF+GK K +++GV+P +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laearekrdaarkllaaGSDPtatrkeaeareafeattGFRTVAEEWLAKREREGLGAVT  120
            LA+AREKR  ARK+LAAG+DP  ++KE            F +VA EW   +         
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKAD-------  113

Query  121  LGKVKWLLEF-----------AYPSLGNRKISEITSMELLAVLRQVEGRGRHETARRLRS  169
                +W L +            +P +G+R I+EI +MELL  LR++E RG  E  R++R 
Sbjct  114  ----RWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQ  169

Query  170  VCGRVFRYAIATGRAEHDLSANLRDALTTPKVKHLAAITNSQQVGPLMRAIETFDGHAVT  229
             CG VFRYAI TGRA+ + +++L  AL+TPK  H++ +T ++++  ++  +  + G  +T
Sbjct  170  RCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIIT  228

Query  230  RAALRLAPHVFVRPGELRHAEWAEIDFDKALWCIPAEKMKMRRPHRVPLSRQSLAIFASI  289
            ++A ++     VR  ELR A+W +IDF+  LW IPAE MKM+RPH VP S Q +A+F  +
Sbjct  229  KTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQL  288

Query  290  REITGTGKFVFPGFQSLKRPMSENALNGALRRLGYSGDEMTSHGFRAMASTLLNEMGRWH  349
              I+    +VF G +  ++P+S +++N  +  LGY G  +T+HGFR   ST+L+E G  +
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQG-FN  346

Query  350  PDAIERQLAHAEADAVRRAYARGEYWDERVAMMQAW-SDYLDDLAG  394
            +  IE QLAH + +++R +Y +++Y D R  MMQ W +DY+D L+ 
Sbjct  347  SAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

491) ETA_03770 in NC_010694


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  241 bits (900),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 146/352 (42%), Positives = 243/352 (70%), Gaps = 16/352 (4%)

Query  1    MALSDVKVRSAKPEVKACKLTDGDGMVLLAHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++ KL+DG+GM LL ++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAFKVEQEQE-AITFEMVARDW-QASNQKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+W Q+  ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFAAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F+ IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELSRIPELLHRIDHYSGRPltrlaleltllVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  + +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELCFARWSEVDFETAMWTIPGEREPSEGVKHSQRGSKMRTPHLVPLSRQALGILEKI  298
            R+ EL FA+W ++DFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMSGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMACS  350
             ++S ++ L+F+G +DPRKP+S +++N+ + ++GY  +  + GHGFR    +
Sbjct  289  EPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMST  338

492) bglu_1g28410 in NC_012724


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  241 bits (898),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 163/393 (42%), Positives = 252/393 (65%), Gaps = 6/393 (1%)

Query  17   VPLTDTAIRNAKPADKPLRLFDGGGLYLEIAPSGGKWWRLKYRFGGKEKRYSLGVYPDVT  76
            ++LTD  ++ AKP ++P +L DGGG+YL I ++G+K WR+KYRF+GKEK  S+GVYPDVT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  77   LAIARKKRDEAREKLAAGIDPGEAKKAEKRAGLLAAAHSFEVVARGWMAERKTTVEPAQH  136
            LA AR KR EAR  LAAG DPGEAKK EK A  ++  ++FE VAR W   +        +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  137  DKTLARMENDVFPWLGKRPIAEIDAPEILVVLKRVDGRGARFTAHRIRSEISRVFRYGIK  196
            D  +   E+D+FP +GKRPIAEI + E+L  L++++ RGA    +++R   + VFRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  197  EGHCKADPARDLVDAIPPAQTTHFASITEPEKVAEMLRAFDGFTGTFPVLCALRLAPMLF  256
             G+   +PA DL  A++ ++  HF+ +T  E +++ L  + G+TG++    A ++  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  257  VRPGELRKAQWSQFELDKGEWRYF--VNKTKTDHLVPLATQAVAILRELHALTGDGVYVF  314
            VR  ELR A+W +++++   W     V K K  H+VP + Q +A++++L++++ +   VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  315  PGARDRNRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEEKPEVIEHQLAH  374
             G  D  +P+S  +IN  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  375  TVPDSLGRAYNRTKFIKARRSMMQQWADYLDKL  407
               +S+  +YN+++++ +RR MMQ  ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

493) Dsui_0218 in NC_016616


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  241 bits (898),  Expect = 6e-65, Method: Compositional matrix adjust.
 Identities = 165/396 (42%), Positives = 255/396 (65%), Gaps = 9/396 (2%)

Query  4    PLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVS  63
            +LTD KV+ AKP E+PYKL DG G+YL + ++G+K+WR +Y+++  K+ + +IG YP V+
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFA-GKEKMLSIGVYPDVT  60

Query  64   LSDarrerewareqaKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYL  123
            L+DAR  R  AR     G +P +AK  E++       NTFEAVAREW + + ++W+ +Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  124  YQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVA  183
             ++   + +D+FP IG  PI  + + +LL  +R +E RGA      +RQ+ G++FRYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  184  TLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFV  243
            T RAD +P++ L +A+      H P L+ +E+P  L  L  Y G   T  AT++++ T V
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  244  RTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG  303
            RT ELR A+W ++D+E+  W +PA+ MKMK+      +HIVP S Q + ++K+L  +S  
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKR------PHIVPPSEQVIALFKQLEPISKH  294

Query  304  RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL  363
            + ++F     P   ++  +IN+ +E +GY G+++GHGFR T ST+LHE G N   IE QL
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQL  354

Query  364  AHAERNKVKAAYNHAEYLPERREMMQAW-SDWIDEL  398
            AH ++N ++++YNHA+YL  RREMMQ W +D ID L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

494) int in NC_015761


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  240 bits (894),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 166/408 (41%), Positives = 256/408 (63%), Gaps = 27/408 (6%)

Query  6    MSLTDTAIRKLRPTDKPFKLGDSAGLYLLIKPNGSKLWYMKYRIDGKEKKLAFGPYPDVS  65
            M+LTD  ++  +P ++P+KL+D++G+YLLI++NGSK W MKYR+ GKEK L++G YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  66   LLTARQLRDAARIKMREGVDPSVDKK---IAQQKKKNGQTFRQIAINWH-ADHRRWSEHY  121
            L  AR+ R  AR  +  G DP+  KK   IA Q   + +TF  +A +WH +   RWS +Y
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLK-NTFEAVAREWHQTKADRWSLRY  119

Query  122  ATTIRRRLEMYIFPDIGDRYIDQIVTEDLLFTLRKVENKGFLEITARLKNYVTEIMRYAV  181
               I   +E  IFP IG R I +I   +LL +LRK+E++G LE   ++++   E+ RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  182  KKQLIRSNPALDLDGEFTPPETQHYPAlpleklpellSRTDNYSGRLLTRYALKLSLLFF  241
                   NPA DL + ++ P   H+P L  + LP++L+    Y+G ++T+ A ++ +L  
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  242  VRSSELRFARWSEIDWQQKLWIIPEEREQIENVRFSHRGTKMKTQHIVPLSDQAMAILKQ  301
            VR+ ELRFA+W +ID + KLW IP E              KMK  HIVP S+Q +A++KQ
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQ  287

Query  302  TEALSGHLAFIFPGEYDQDKCMSDNTISKALRVMGYDTRKEICGHGFRAMACSALSESGL  361
             E++S H +++F G  D  K +S ++I++ + ++GY  R  + GHGFR    + L E G+
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

Query  362  ---WSKEAIEKQMSHQERNSVRAAYIHKAEYLEERINMMQWWADYLDA  406
               W    IE Q++H ++NS+R++Y H A+YL+ R +MMQW ADY+D+
Sbjct  346  NSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

495) PAU_03975 in NC_012962


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  240 bits (896),  Expect = 5e-65, Method: Compositional matrix adjust.
 Identities = 130/288 (46%), Positives = 203/288 (71%), Gaps = 15/288 (5%)

Query  1    MALTDIKVRTAKPTDKQYKLTDGNGMHLLVHPNGSRYWRLQYRFGGKQKMLALGVYPEVS  60
            MALTD+KV+TAKP ++ YKL+DG GM LL+++NGS+YWR++YRF+GK+KML++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADSRARRDEARKLLANGIDPGDKKKNDKIEQEET--RTFEQLAVEWHATN-KKWSEEHS  117
            LAD+R +R EARK+LA G DPG+ KK++KI  + +   TFE +A EWH T+  +WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  RRVLKSLEDNLFPAIGKRNIAELKTRDLLAPIKAVELSGRLEVASRLQQRTTAIMRYAVQ  177
              ++ ++E ++FP IGKR IAE+K  +LL +++ +E  G LE   +++QR   + RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGLLDYNPAQEMVGAVASSNRQHRPALELKRTPELLQRIESYTGRSLTRLAVELTLLVFI  237
            +G  DYNPA ++ +A+A++++ H P L  +  P++L  + +YTG  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWSEIDFETSIWTIPAEREAIEGVKHSQRGSKIRTPHLVP  285
            R+ ELRFA+W +IDFE+ +W IPAE              K++ PH+VP
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVP  276

496) intA1 in NC_005810


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  240 bits (897),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 241/382 (64%), Gaps = 2/382 (0%)

Query  18   PLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYPAL  77
            +LT+  V+ AK+ ++   L DG+G++LL+++ G K WR +Y+++   K  M+S+G YP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEK--MLSIGVYPDV  59

Query  78   SLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSAAH  137
            +LADARE R+E   +L  G DP     EE   LQ++  + F  VAR W + K  + S   
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  138  AKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIYAV  197
              +I  ++EKDI+P I + PI E+K+  L++ L  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  198  NVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLLTL  257
              G  D NPA+++++A+  PKK H P + ++ELP ++  +A    S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  258  IRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQHVF  317
            +R  E   + W +ID+E K W IPAE MK KR HIVP SEQ + L+  + PIS ++  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  318  PSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHSDK  377
             +RNDPR+ ++ ++ N  +  +GY G+L +HG+R   ST ++E GFN+  IE  LAH DK
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  378  NEVRKAYNRSTYLIQRQELMNW  399
            N +R +YN++ YL  R+E+M+W
Sbjct  360  NSIRGTYNHAQYLDGRREMMQW  381

497) intA in NC_004088


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  240 bits (897),  Expect = 7e-65, Method: Compositional matrix adjust.
 Identities = 153/382 (41%), Positives = 241/382 (64%), Gaps = 2/382 (0%)

Query  18   PLTHTEVQKAKATDKDLTLHDGDGLFLLVKTTGKKIWRFRYQLPNSSKRTMISLGAYPAL  77
            +LT+  V+ AK+ ++   L DG+G++LL+++ G K WR +Y+++   K  M+S+G YP +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEK--MLSIGVYPDV  59

Query  78   SLADAREIRAEKLAMLVRGTDPQTRAGEEAEKLQIAEESIFVNVARKWFELKESHVSAAH  137
            +LADARE R+E   +L  G DP     EE   LQ++  + F  VAR W + K  + S   
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  138  AKDIWRSIEKDILPSIENIPIQELKARTLIQVLEPIKARGALETVRRLVQRINEIMIYAV  197
              +I  ++EKDI+P I + PI E+K+  L++ L  +  RGALE +R++ QR  E+  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  198  NVGLIDANPASGIGNAFERPKKQHMPTIRPEELPKLMRTIAMSNLSLPTRCLLEWQLLTL  257
              G  D NPA+++++A+  PKK H P + ++ELP ++  +A    S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  258  IRPAEASATAWIEIDLENKQWCIPAERMKAKRDHIVPLSEQALELLEIMRPISGNRQHVF  317
            +R  E   + W +ID+E K W IPAE MK KR HIVP SEQ + L+  + PIS ++  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  318  PSRNDPRNHMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHSDK  377
             +RNDPR+ ++ ++ N  +  +GY G+L +HG+R   ST ++E GFN+  IE  LAH DK
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  378  NEVRKAYNRSTYLIQRQELMNW  399
            N +R +YN++ YL  R+E+M+W
Sbjct  360  NSIRGTYNHAQYLDGRREMMQW  381

498) Bcenmc03_2483 in NC_010508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  240 bits (896),  Expect = 8e-65, Method: Compositional matrix adjust.
 Identities = 160/393 (41%), Positives = 249/393 (64%), Gaps = 6/393 (1%)

Query  1    MPLTDTAIRNAKPADKPVRLFDGGGLYLEVAPSGGKWWRLKYRFGGKEKRYSLGVYPEVT  60
            M+LTD  ++ AKP ++P +L DGGG+YL + ++G+K WR+KYRF+GKEK  S+GVYP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LATARKKRDEAREKLAAGIDPGKAKKAEKRASLLAAAHSFEVVARGWMAERKTTVEPAQH  120
            LA AR KR EAR  LAAG DPG AKK EK A  ++  ++FE VAR W   +        +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  AKTLARMENDVFPWLGKRPIAEIDAPEILAVLKRVDGRGARFTAHRIRSEISRVFRYGIK  180
               +   E+D+FP +GKRPIAEI + E+L  L++++ RGA    +++R   + VFRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  EGHCKADPARDLVDAIPPAQTTHFASITEPEKVGEMLRAFDGFTGTFPVLCALKLAPMLF  240
             G+   +PA DL  A++ ++  HF+ +T  E + + L  + G+TG++    A ++  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  VRPGELRKAEWAQFDLDKGEWRYF--VNKTKTDHLVPLAAQAVTILRELHALTGEGVYVF  298
            VR  ELR A+W ++D++   W     V K K  H+VP + Q ++++++L++++ +   VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARDRNRPMSEAAINAALRRLGYDTRTEITGHGFRAMARTILHEELEEKPEVIEHQLAH  358
             G  D  +P+S  +IN  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  TVPDSLGRAYNRTKFIKARRSMMQQWADYLDKL  391
               +S+  +YN+++++ +RR MMQ  ADY+D L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

499) Msip34_2834 in NC_012972


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 161/396 (41%), Positives = 259/396 (66%), Gaps = 11/396 (2%)

Query  1    MALTDLAVKNADPKPKPYKLTDGNGLYLLIKPSG-KYWRFDYRFNYKRKTLALGVYPDTT  59
            MALTD+ VK A PK +PYKL+DG G+YLLI+++G KYWR  YRF  K K L++GVYPD T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  60   LAHAREKLDKARKLLANDPPVDPGENRKAERASRTAKNESCFEVIAREWVASYMLNKSDL  119
            LA+AREK   ARK+LA +   DPGE +K E+ +      + FE +AREW  +   ++  L
Sbjct  61   LADAREKRSEARKILAAGG--DPGEAKKEEKIALQMSLKNTFEAVAREWHQT-KADRWSL  117

Query  120  H-RQRVFRRLEVFMFPWIGAVSIDQLTAPEILKCIRRIQAQNKIETAHRTLQATGQVFRY  178
            + R+ ++  +E  +FP IG  +I ++ + E+L  +R+++ +  +E  ++  Q  G+VFRY
Sbjct  118  RYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  179  AVQTGRAIRDVTHDLRGALPSHNVKHMASFTEPEQVAQLLKAIEGFTGSFTVQTALRLAP  238
            A+ TGRA  + + DL +AL++ +  H + F  +++++++L  + G+TGS+  +TA ++  
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFP-FLTANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  239  LVFVRPSELRKARWADIDLEKKEWRFR--VSKTNIDHLVPLSTQAVELLEGIKPVSGHGE  296
            L  VR  ELR A+W DID+E K W +   V K +  H+VP S Q + L+  + P+S H  
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  297  WVFMGGHDPKKPMSAAAINAALKRMGYNTQTEITGHGFRAMARTILHERLNFDPYVIEHQ  356
             VF+G +DP+KP+S  +IN  +  +GY+ +  +TGHGFR    TILHE+  F++  IE Q
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQ  353

Query  357  LAHKVPDALGAAYNRTKFIEQRKDMMQKWADFLTYL  392
            LAH   +++ ++YN++++++ R++MMQ  AD++  L
Sbjct  354  LAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

500) intB in NC_014228


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 165/409 (41%), Positives = 262/409 (65%), Gaps = 27/409 (6%)

Query  1    MKLNARQIETAKPKEKNYKLADGGGLYLEVTSRGSKYWRMKYRRPTDKKEDRLAFGVYPT  60
            M L   ++ TAKPKE+ YKLADGGG+YL + + GSKYWRMKYR +   KE  L++GVYP 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VSladarakrdeakkllaQGINPKAEQKEAQSESEGVF--TFEHIAREWRASN-KRWSED  117
            V+LADAR KR EA+K+LA G +P   +KE +   +  +  TFE +AREW+ ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HSGRIMRSLEQYIFPHIGALDVRTLRTSHLLTPIKSVDINGKHDVAQRLQQRVTAIMRYA  177
              + I+ ++E+ IFP IG   +  ++  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNGILEYSPANDMAGALTIVKSKHHAALPHECLPEFLTRLSCYRGRLITRIAVELTLLT  237
            +  G  +Y+PA D+A+AL+  K  H + L  + LP+FLT L+ Y G +IT+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSEMRFARWEEIDLERAVWCVPATRKLIEGVKHSQRGMKMKTEHIVPLSRQAVLLIE  297
             VR+ E+RFA+WE+ID+E  +W +PA              MKMK  HIVP S Q + L+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  KLHGLSGDSEVMFPGDHDPKKVMSENTVNNALRAMGYDTKTEVCGHGLRTMARGAMGESG  357
            +L+ +S +  ++F G +DP+K +S +++N+ +  +GY  K  + GHG+R      + E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHIERNNVRAAYIHTSKHLDERRLMVQWWADYLDA  403
            +   W    IE QL+H+++N++R++Y H ++ LD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

501) SLG_25940 in NC_015976


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  238 bits (887),  Expect = 4e-64, Method: Compositional matrix adjust.
 Identities = 168/396 (43%), Positives = 261/396 (66%), Gaps = 11/396 (2%)

Query  2    LTYIQINAAKPRDKAWNLSDSQGLYLIIQPNGSKLWRFRYRFLDRQKTLHLGGWPQISLA  61
            LT +++++AKP++++ +L+D+ G+YL+I++NGSK WR +YRF +++K L +G  P+++LA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  62   DARTRRDDAKKLVANGIDPALEkkrariaakhaaaNTFEAVAQEW-LVKCERDGLAPVTI  120
            DAR +R +A+K++A G DP+  KK  +IA + +  NTFEAVA+EW   K +R +L     
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSL-RYRD  121

Query  121  EKISWLLDKAYPMIGNIPIAQITPHEALAVLRKIEATGAYESARRMRSVLSRVFRYGVAT  180
            E I  +    +P IG+ PIA+I P E L  LRK+E  GA E  R++R   + VFRY++ T
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  181  VRCDKDVAADLRGAIAVPKVKHFAAITRPSEVGTLLRAIDGYTGHKVTVMAMRLSPHVLL  240
             R D + A+DL +A+A PK  HF+ +T ++E+  +L  + GYTG  +T  A ++     +
Sbjct  182  GRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RPGELRQAEWTDIDFDEAIWFIPAERMKMRRPHRVPLSRQVIEMLKELHEHTHWWKYLFP  300
            R  ELR A+W DIDF+  +W IPAE MKM+RPH VP S QVI ++K+L+  +     +F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  301  CLGKPRKAMSENAVNQGLRKLGYTTDQMTAHGFRAMAATLLNEMG---EWNPDAIERQLA  357
                PRK++S +++NQ +  LGY  +++T+HGFR   +T+L+E G    W    IE QLA
Sbjct  301  GRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAW----IEMQLA  355

Query  358  HVDTNQVRRAYARGEYWDERVRMMQYWSDYLDTLRD  393
            HVD N +R +Y +++Y D R  MMQ  +DY+D+L +
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE  391

502) Dda3937_01301 in NC_014500


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 170/410 (42%), Positives = 261/410 (64%), Gaps = 27/410 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT  60
            M L   +V TAKPKE+ YK+ADGGG+YL I + GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTladarakrdeakkllVQGIDPkaeqkeaqaeTAGAY--TFETIARQWHASN-KRWGDY  117
            VTLADAR KR EA+K+L  G DP   +KE +     +   TFE++AR+WH ++  RW+  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I  +K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLT  237
            +  +  D NPA+D+++AL+T K  H+P L ++ L +FL+ LA+Y G  +T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFAQWHEFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLE  297
             VR+ ELRFA+W+++DF+   W +PA+             MKMK  HIVP S Q +AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGESG  357
            QL +IS ++  +F G +DP K +S +++N+ +  +GY  +  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYLEVL  404
            +   W    IE QL+H ++N++R++Y H ++YLD RR M+QW ADY++ L
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

503) PCA10_49420 in NC_021499


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 158/394 (41%), Positives = 247/394 (63%), Gaps = 6/394 (1%)

Query  10   PLADTVLASLDPETKEYRELDGDGLYFRVKPDGSKSWQLRYKKADGKWSWLGLGGYGTGD  69
            +L+D  + +  P  + Y+  DG+G+Y+ ++++GSK W+++Y+   GK   L++G Y    
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR-FAGKEKMLSIGVYP---  57

Query  70   HQLTGEQARRKVRELRDSTAKDGSIMatkrarkaaeleaaNNTFEHLAREWYATKCKTWT  129
             ++T  +AR K  E R   A +G    +K+  K A   + +NTFE +AREW  TK   W+
Sbjct  58   -DVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWS  116

Query  130  EGTAVRTIGALEKHVFPEFGKRPYTGILPMEWMEFLRSMEQTGIVEQTSRVRGMCREIYD  189
                   I+++EK++FP +GKRP + I PME +E LR ME+ G +E+  +VR  C E++ 
Sbjct  117  LRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFR  176

Query  190  LARVTGRATHNPLEGLHKFLLTKPVENFAHVSLEELPALLRAIRSYPHAPDVRIGLQLQT  249
             A VTGRA  NP  +L   L T    +F+ ++ +ELP +L  + +Y  +   + + Q+  
Sbjct  177  YAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  250  MLACRPSELREASWEEFDLDAGLWLIPAERMKRRREHLVPLPNQALELLRELHNITGSFP  309
            + + R  ELR A WE++D++A LW IPAE MK +R H+VP ++Q + L+++L+ I+   P
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  310  LLFPGRGDTTKPRSNTVFLMALRRLGYEGRQTGHGFRHLASTILNENGFDSQHVEAQLSH  369
            L+F GR D  KP S+  +   +  LGY GR TGHGFRH  STIL+E+GF+S  +E QL+H
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAH  356

Query  370  V-KEGVRGVYDKSTYLDQRKVMMQWYADHLDKLA  402
            V K+++RG Y+ + YLD R+ MMQWYAD +D L+
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLS  390

504) Vapar_4495 in NC_012791


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 168/395 (43%), Positives = 267/395 (68%), Gaps = 7/395 (1%)

Query  1    MALTDTFVRQVKPTGKANGDKYADGAGMYLLVKTAG-KYWRMDYTFAGKRKTLALGTYPE  59
            MALTD  V+  KP  ++   K ADG+GMYLL+++ G KYWRM Y FAGK K L++G YP+
Sbjct  1    MALTDVKVKTAKPKERPY--KLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPD  58

Query  60   VSlakardrraaarellaDGTDPSaakreekraradaaaNTFEAVAREWLGKTAAKRASG  119
            V+LA AR++R+ AR +LA G DP+ AK+EEK A   +  NTFEAVAREW    A +++  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  120  TQLKVKTWLEKDVFPFIGKMPISTIGPRDILERVVRKLEARGAIDTAHRVKQLCGQVFRF  179
             +  +   +EKD+FP+IGK PI+ I P ++LE  +RK+E RGA++  ++V+Q CG+VFR+
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLE-ALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  180  AVVSGLAERDVTADLSEALASKATRHFAAITEPKRVGDLMRSIHAYSGHPTTVAALKLSP  239
            A+V+G A+ + ++DL+ ALA+    HF+ +T ++ + +++  + +Y+G   T +A ++  
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  240  LLFVRPGELRTAEWAEIDLDAAEWRIAGPKMKMKVDHVVPLATQAVEILRDLHPITGHGR  299
            L  VR  ELR A+W +ID++A  W I++  MKMK  H+VP + Q + ++++L+PI+ H  
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP  296

Query  300  FVFPSIRTGERPMSENTINAALRGMGYSAEVHTAHGFRATARTIMDEVLGERVDFIEHQL  359
            +VF +     +P+S ++IN  +  +GY + + T+HGFR T  TI++E  G     IE QL
Sbjct  297  LVFIGRNDPRKPISKESINQVIELLGYKGRL-TGHGFRHTMSTILHEQ-GFNSAWIEMQL  354

Query  360  SHMVRDTNGRAYNRTAHLPARREMMQRWADYLDKL  394
            +H+ +++   +YN++  L +RREMMQ+ ADY+D L
Sbjct  355  AHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

505) LPO_0155 in NC_018139


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  236 bits (880),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 163/389 (42%), Positives = 250/389 (65%), Gaps = 7/389 (1%)

Query  6    EITFRNAKPEAKSYKISDEKGLFMHVTPQGNKYWRLKYRFDGKEKLLALGVYDDVTlaka  65
            ++  + AKP  ++YK++D  G+++ + ++G+KYWR+KYRF GKEK+L++GVY DVTLA A
Sbjct  5    DVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADA  64

Query  66   rekrdearrllaDGIDPGEHKKVMKQVANERSANSFEVVAREWFVKYSSNWVKSHADKIM  125
            REKR EAR++LA G DPGE KK  K   +    N+FE VAREW    +  W     D I+
Sbjct  65   REKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDEII  124

Query  126  QRFLRDIFPWIGNKPITEVTPPVLLSVIRRIEERGALETAHRALSNCGQVFRYAIATGRA  185
            + F +DIFP IG++PI+E+ P  LL  +R++E RGALE  ++    CG+VFRYAI TGRA
Sbjct  125  DTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRA  184

Query  186  ERDSSQDLRGALPPVKTKHFAAQTDPKRFGDLLKIFDDYQGSLIVRSALRLAPLFFVRPG  245
            + +++ DL +AL+  K  HF+  T ++ + ++L  + +Y GS+I ++A ++  L  VR  
Sbjct  185  DYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQ  243

Query  246  ELRHAQWEDFDFDKAQWSFI--VTKTNTPHIVPLATQALEILAELQPLTGNSTYVFPSAR  303
            ELR A+WED+DF+   W +   V K + PHIVP + Q + ++ +L+P++ +   VF +  
Sbjct  244  ELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRN  303

Query  304  SNSRPMSDNAILAALRRLGISKEEASGHGFRATARTLLDEVLRVRPDIIEHQLAHAVRDP  363
               +P+S ++I   +  LG  K   +GHGFR T  T+L+E     +  IE QLAH  +++
Sbjct  304  DPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAHVDKNS  361

Query  364  NGRAYNRTAHLIERKKMMQDW-ADYLDRL  391
               +YN++  L  R+ MMQ W ADY+D L
Sbjct  362  IRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

506) Glov_3112 in NC_010814


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 158/393 (41%), Positives = 258/393 (66%), Gaps = 5/393 (1%)

Query  7    PLADIQVNKAKKKEKDYKLSDGGGLHLLVTKTGGKLWRMQYRFDGKQKMLSFGAYPAISL  66
            +L+D++V+ AK KE+ YKL+DGGG+ LL+   G+K WRM+YRF GK+KMLS+G YP ++L
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTL  61

Query  67   ADARQRREDARKLLANGQDPaavkkavqeaavvaaastfaivaGEWFQKRKPEWVDSHAV  126
            ADAR++R +ARK+LA G DP+  KK  + A  ++  +TF  VA EW Q +   W      
Sbjct  62   ADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRD  121

Query  127  SVKGRLDNYILPAFGSKPIVEVTAADVRTMLLKIEARGTIEAAKRVKVICGQVFRYAAAH  186
             + + +++ I+P +G +PI E+ + ++   L K+E RG++E  ++V+  CG+VFRYA   
Sbjct  122  EIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVT  181

Query  187  DLIQHDPSAALKPSELFRKVEKRHFAAVTDPKELAPLLRSIEGYTGSIETRCAlrllpml  246
            +  + +P++ L ++  +    K HF+ +T ++EL+ +L  + GYTGSI T+ A +++ + 
Sbjct  182  GRADYNPAPDLASA--LATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  247  lmrpGELRHLEWSEIDREAGQINIPAEKMKMRTAHTVPLCKQALAILEEIRPLTGHGKYV  306
             +R  ELR  +W +ID EA   +IPAE MKM+ +H VP   Q +A++ ++ P++ H   V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  307  FPSTRSAERPISDNTLNACFRRMGYDSDTVTAHGFRATARTILDEVLGFRPDIIEHQLAH  366
            F +   + +PIS +++N  +  +GY +  +T+HGFR T  TIL+E  GF +  IE QLAH
Sbjct  299  FIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  367  AVKDPNGRAYNRTAFIDDRRKMMQQWSDYLDSL  399
              K++   +YN++ ++D+RR MMQ  +DY+DSL
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

507) intA in NC_013956


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (878),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 157/387 (41%), Positives = 248/387 (65%), Gaps = 2/387 (0%)

Query  7    PLTNTEVLRAKAVDKELTLHDGDGLFLLVKTSGKKLWRFRYQRPKTKQRTMMGLGAFPal  66
            +LT+  V  AK+ ++   L DG+G++LL++++G K WR +Y R   K++ M+++G +P +
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY-RFAGKEK-MLSIGVYPDV  59

Query  67   sladarrlraEYLSLLANGIDPqtqaeqateqqqIALESIFSTVAANWFQLKSKSVTPDY  126
            +LADAR  R+E   +LA G DP     +     Q++L + F +VA +W Q K+   +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  AKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKVRGALETVRRLVQRINEIMIYAT  186
              +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ QR  E+  YA 
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NTGLIDANPGSGIGMAFEKPKKQNMPTLRPEELPNLMRSLAMSNLSVTTRCLIEWQLLTL  246
             TG  D NP+++++ A+  PKK + P L ++ELP+++  LA    S+ T+   +  +LT 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  247  VRPSEASGTRWIEIDFAAKLWVIPAERMKSKREHIVPLSPQALDILEVLKPISVHREYVF  306
            VR  E   ++W +IDF AKLW IPAE MK KR HIVP S Q + ++  L PIS H+  VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  307  PSRNDPRQPMNSQTANAALKRIGYRGKLVAHGLRSIASTALNESNFNSDVIESALAHSDR  366
             +RNDPR+P++ ++ N  +  +GY+G+L +HG+R   ST L+E  FNS  IE  LAH D+
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDK  359

Query  367  NEVRKAYNRSIYLKQRVELMDWWGNFV  393
            N +R +YN++ YL  R E+M+W ++++
Sbjct  360  NSIRGTYNHAQYLDGRREMMQWYADYI  386

508) Dtpsy_1577 in NC_011992


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (877),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 169/396 (43%), Positives = 249/396 (63%), Gaps = 12/396 (3%)

Query  2    LSDTACRAAKAQEKPAKLSDSGGLYLLVNQAG-KYWRWDYRHAGKRKTLALGVYPGVTLA  60
            L+D   ++AK++E+P KL+D+GG+YLL+N  G KYWR  YR AGK K L++GVYP+VTLA
Sbjct  3    LTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLA  62

Query  61   TarkkrddarallVEGVDPGEARKAQKAALFADDENTFEAIMREWHALQAPKWSPRYAEK  120
             AR KR +AR +L  G DPGEA+K +K AL     NTFEA+ REWH  +A +WS RY + 
Sbjct  63   DAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYRDE  122

Query  121  MLARFVQNVFPYMGSVPIADMTPSALLAVVRKLEARGLGEVPSRTLSECGQVMRYAVATG  180
            ++  F +++FPY+G  PIA++ P  LL  +RK+E RG  E   +    CG+V RYA+ TG
Sbjct  123  IIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTG  182

Query  181  RAERDITADLRGALAPMRTKHLAAVTEPEKVGPLLRVLDDYDGTATVRCALRLAPLLFVR  240
            RA+ + ++DL +ALA  +  H++ +T  E +  +L  L +Y G+   + A ++  L  VR
Sbjct  183  RADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQIIMLTGVR  241

Query  241  PGELRSMRWADIDFEACEWRYL--VTKTQTRHIVPLSRQTLAILEEIRPITGRGVYVFPS  298
              ELR  +W DIDFEA  W     V K +  HIVP S Q +A++ ++ PI+ +   VF +
Sbjct  242  TQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIG  301

Query  299  ARTMSPAAKSQRPMSDNAILAALRRAGIDKDEMTGHGFRAMARTILDEVLGFRPDFIEHQ  358
                     +++P+S ++I   +   G  K+ +TGHGFR    TIL+E  GF +  IE Q
Sbjct  302  ------RNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQ  353

Query  359  LAHAVRDPNGRAYNRTAHLPARHEMMQQWADYLDKL  394
            LAH  +++   +YN++  L +R+EMMQ  ADY+D L
Sbjct  354  LAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

509) XALc_1804 in NC_013722


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (876),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 174/406 (43%), Positives = 260/406 (65%), Gaps = 26/406 (6%)

Query  1    MPLTDTAIRKTKLGVAPLKLRDGGGLYLLMRPDGARWWRWDYRRPNTGKRNTLSLGTYPD  60
            M+LTD  ++ +K    P KL DGGG+YLL+ ++G++ WR  YR   +GK + LS+G YPD
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   TGladardkrdaarkllaaGVDPGEQRKRAKEQAAMVAPAGETFETVAREWMARQTVARV  120
              LADAR+KR  ARK+LAAG DPGE +K   E+ A+  +  +TFE+VAREW   ++    
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKK--EEKIALQMSLKNTFEAVAREWHQTKA----  112

Query  121  TAEKNRW-------LLETF---LFPEIGSRPIGEITPRELLDALRKIEATGKLETAGRAK  170
                +RW       +++TF   +FP IG RPI+EI P ELL+ALRK+E  G LE   + +
Sbjct  113  ----DRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVR  168

Query  171  IKAGQVFRYAMLEGKAEIDPTASLRGALKTVKARHHASITDPVKIGQLLRAIEGFIGQPV  230
             + G+VFRYA++ G+A+ +P++ L +AL T K  H + +T    + ++L  + G+ G  +
Sbjct  169  QRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTAN-ELPHFLTDLAGYTGSII  227

Query  231  THAALKLAPLVFVRPGELRAAEWGEIDLDAAMWRIRPERMKMKAAHLVPLSSQAVAILRD  290
            T +A ++  L  VR  ELR A+W +ID++A +W I +E MKMK +H+VP S Q +A++++
Sbjct  228  TKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQ  287

Query  291  LHALTGGGPHVFPGLR-PNRPMSENTINAALRGLGYASDEMTGHGFRSMAATRLNEMGWN  349
            L++++   P VF G   P +P+S ++IN  +  LGY  + +TGHGFR   +T L+E G N
Sbjct  288  LEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFN  346

Query  350  PDAIERQLAHAETNKVREAYTHAAQYLPERIRMMQAWADYLDGLCA  395
            +  IE QLAH + N +R +Y H AQYL  R  MMQ  ADY+D+L  
Sbjct  347  SAWIEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSLSE  391

510) Dd703_3554 in NC_012880


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (876),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 260/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT  60
            M L   +V TAKPKE+ YK+ADGGG+YL I + GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTlaearakrdeakkllVQGIDPkaeqkeaqaeTAGAY--TFETIARQWHASN-KRWGDY  117
            VTLA+AR KR EA+K+L  G DP   +KE +     +   TFE++AR+WH ++  RW+  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I  +K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLT  237
            +  +  D NPA+D+++AL+T K  H+P L ++ L +FL+ LA+Y G  +T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFAQWREFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLE  297
             VR+ ELRFA+W ++DF+   W +PA+             MKMK  HIVP S Q +AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGESG  357
            QL +IS ++  +F G +DP K +S +++N+ +  +GY  +  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++N++R++Y H ++YLD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

511) EbC_39600 in NC_014306


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (877),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 169/408 (42%), Positives = 259/408 (64%), Gaps = 27/408 (6%)

Query  1    MKLNARLVDTAKPKEKTYKMADGGGLYLEVTTKGSKYWRMKYRRPADKKEDRLAFGVWPT  60
            M L    V TAKPKE+ YK+ADGGG+YL + ++GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTLaearakrdeakkMLGQGIDPkaeqkeaqaeNAGAY--TFETIAREWHASN-KRWSDD  117
            VTLA+AR KR EA+K+L+ G DP   +KE +     +   TFE++AREWH ++  RWS  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRSRIMRYLELYIFPHIGLADVRRLKTSQLLAPIKSVDASGRHDVAQRLQQRVTAIMRYA  177
             R  I+  +E  IFP IG   +  +K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIESNPAVDMAGALSTVKARHYPALPFSGFPEFLERLAAYRGRIMTRIAVELSLLT  237
            +  +  + NPA D+A+AL+T K  H+P L  + +P+FL  LA+Y G I+T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFARWDEFDFERALWRVPAQRKEIEGVRYSHRGMKMKEEHLVPLSSQVLALLE  297
             VR+ ELRFA+W+++DFE  LW +PA+             MKMK  H+VP S QV+AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  KLKQLSGDNERLFPGDHDPKKVMSENTVNNALRAMGYDTKTEVCGHGFRTMARGALGESG  357
            +L  +S ++  +F G +DP+K +S +++N+ +  +GY  K  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYIHTSEHLDERCLMVQWWADYLS  402
            +   W    IE QL+H ++N++R++Y H ++ LD R  M+QW ADY+ 
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYID  387

512) Dd1591_3717 in NC_012912


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (875),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 169/409 (42%), Positives = 260/409 (64%), Gaps = 27/409 (6%)

Query  1    MKLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT  60
            M L   +V TAKPKE+ YK+ADGGG+YL I + GSKYWRMKYR ++  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAG--KEKMLSIGVYPD  58

Query  61   VTlaearakrdeakkllVQGIDPkaeqkeaqaeTAGAY--TFETIARQWHASN-KRWGDY  117
            VTLA+AR KR EA+K+L  G DP   +KE +     +   TFE++AR+WH ++  RW+  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  118  HRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRVTAIMRYA  177
             R  ++  +E  IFP IG   I  +K  +LL +++ ++  G  +  ++++QR   + RYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  178  VQNDYIDSNPASDMSGALTTTKARHYPALPPERLHEFLSRLAAYRGRQMTRIAVELTLLT  237
            +  +  D NPA+D+++AL+T K  H+P L ++ L +FL+ LA+Y G  +T+ A ++ +LT
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  238  FVRSSELRFAQWREFDFDKAYWRVPAQREAIKGVRYSYRGMKMKEEHIVPLSRQAVALLE  297
             VR+ ELRFA+W ++DF+   W +PA+             MKMK  HIVP S Q +AL+ 
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFK  286

Query  298  QLKAISGDNKCLFPGDHDPEKVMSENTVNNALRAMGYDTQTEVCGHGFRTMARGALGESG  357
            QL +IS ++  +F G +DP K +S +++N+ +  +GY  +  + GHGFR      L E G
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQG  344

Query  358  L---WSDDAIERQLSHSERNNVRAAYTHTSEYLDERRLMVQWWADYLDA  403
            +   W    IE QL+H ++N++R++Y H ++YLD RR M+QW ADY+D+
Sbjct  345  FNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDS  388

513) Reut_A2191 in NC_007347


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  235 bits (875),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 160/399 (41%), Positives = 258/399 (65%), Gaps = 12/399 (3%)

Query  6    LPLADLQCRQAKYSTAGGNRLRDGGGLYLELLPSGAKKWRMKYQRPGSKSENLLTFGDYP  65
            ++L+D++ + AK +     +L DGGG+YL + ++G+K WRMKY+ +G   E++L++G YP
Sbjct  1    MALTDVKVKTAK-PKERPYKLADGGGMYLLINANGSKYWRMKYRFAGK--EKMLSIGVYP  57

Query  66   AVGLSaarerreearaQLAVGTDPALARDLAKATVAEAARNTFRAVAEEWLKHRHDTWSA  125
             V L+ ARE+R EAR  LA G DP+ A+   K ++  + +NTF AVA EW + + D WS 
Sbjct  58   DVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSL  117

Query  126  SYAQKTKQLLERDLYPDLGQHPIASITPAFLLTVARKIEARGAYEMPRRALVTAGQIFQY  185
             Y +   + +E+D++P +G++PIA I P  LL   RK+E RGA E  R+     G++F+Y
Sbjct  118  RYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  186  AIGTGRASIDASAGMVAQLKPRPPVKHYPHVADTQLPDLLQRIDRYTGRPETIAAVKLAV  245
            AI TGRA  ++++++ + L     V H+P ++  +LP++L  +  YTG   T +A ++ +
Sbjct  178  AIVTGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  246  LTFIRGGELRYAEWSELDLEKAEWHVPSGRMKGRLWHKLSGTPHVVPLSRQTIALLEDLK  305
            LT +R  ELR+A+W ++D+E   W++P+  MK +        PH+VP S Q IAL+ +L 
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMK-------RPHIVPPSEQVIALFKQLE  289

Query  306  QYTGHYALLFPGAVSVLKPVTGEAMNKVFHSIGFKGQQTVHGLRGLASTLLNESGLFDPR  365
              + H +L+F G     KP++ E++N+V++ +G+KG+ T HG+R   ST+L+E G F++ 
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG-FNSA  348

Query  366  VIEAQLSHKETNKTIAAYNHAKYLPERRRVMQWWADYID  404
             IE QL+H + N   ++YNHA+YL  RR +MQW ADYID
Sbjct  349  WIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYID  387

514) Fraau_2605 in NC_017033


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  233 bits (867),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 157/372 (43%), Positives = 248/372 (67%), Gaps = 6/372 (1%)

Query  23   DGGGLHLKVEATGRKYWRYDFRIAGKPDTFAVGVYPKVTLAEARLRHAEASALVSQGINP  82
            DGGG+ L ++A G KYWR  +R+AGK   +++GVYP VTLA+AR +++EA  +++ G +P
Sbjct  22   DGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDP  81

Query  83   kahkrakqaaavvanantfqavaDEWMAQQKPKMAKATY-DKAMWMLADLVYPWLGKRPI  141
               K+  + A  ++  NTF+AVA EW  Q K+      Y D  +  +   ++P +GKRPI
Sbjct  82   GEAKKEEKIALQMSLKNTFEAVAREW-HQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPI  140

Query  142  SEIDAPELLAVLRRIEERGANETAHRTKQRCGQIFRYAIATGRAKHDPSGDLRGALAPPI  201
            +EI + ELL  LR++E RGA E  ++ +QRCG++FRYAI TGRA  +P+ DL +ALA P 
Sbjct  141  AEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATP-  199

Query  202  TKSRAAITDPQKVGELLRAIDGYSGSFSVICALRLAPMLFVRPGELRHAEWAEFDLDQGL  261
             K + ++  ++ + ++L  + GY+GS+    A ++  +  VR  ELR A+W ++D++  L
Sbjct  200  KKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFEAKL  259

Query  262  WRIPAEKMKMRDEHLVPLPDQALAILRDLLPLTGPDGYLFPGERSASRPMSENTVNAALR  321
            W IPAE MKM+  H+VP ++Q +A++++L P++  +  +F G   + +P+S +++N  + 
Sbjct  260  WEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQVIE  319

Query  322  RLGYDKDTMTGHGFRAMASTRLNELGWSPDVIERQLAHAERNKVRAAYNRAQYLPERQRM  381
             LGY K+ +TGHGFR   ST L+E G ++  IE QLAH ++N +R++YN+AQYL  R+ M
Sbjct  320  LLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREM  378

Query  382  MQAW-ADYLDSL  392
            MQ W ADY+DSL
Sbjct  379  MQ-WYADYIDSL  389

515) RPC_0628 in NC_007925


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 158/388 (41%), Positives = 250/388 (65%), Gaps = 12/388 (3%)

Query  13   KPAEKDYKRSDSGGLFMLVTKTGSKLWRYGYNFDAKQKLLALGQYPLISLADARTKRDDA  72
            KP E+ YK +D+GG+++L+   GSK WR  Y F +K+K+L++G YP ++LADAR KR +A
Sbjct  12   KPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEA  71

Query  73   KRLLAEGIDPSVERKAERRDARIARSHTFEAVAKELMDKFEAEGDAPTTLKKKQWLLD-F  131
            +++LA G DP+  +K E+   +++  +TFEAVA+E     +       +L+ ++ ++D F
Sbjct  72   RKILAAGGDPGEAKKEEKIALQMSLKNTFEAVARE----WHQTKADRWSLRYRDEIIDTF  127

Query  132  ANKEF---GKRPIAEIKAPEILDALRKIEKRGRHETATRVRSTVGAVFRYGIATGRAEQD  188
             +  F   GKRPIAEIK+ E+L+ALRK+EKRG  E   +VR   G VFRY+I TGRA+ +
Sbjct  128  EKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYN  187

Query  189  PAADLRGALITPTVTHRATIVEPDAVGALLRAIDGFEGNAAIRYALRLAPLFFVRPGELR  248
            PA+DL +AL TP   H   ++ ++ +  +L  + G+ G+   + A ++  L  VR  ELR
Sbjct  188  PAPDLASALATPKKVH-FPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELR  246

Query  249  KAEWAEFKLENAEWRIPAAKMKMRRPHRVPLAHQALSILRELQGITGGSKYLFPSVRSWH  308
             A+W ++ +E   W IPA  MKM+RPH VP ++Q ++++++L+ I+     +F +    +
Sbjct  247  FAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPR  306

Query  309  RPISDNTLNAVLRRLGYDKTELTVHGLRSTASVLLNESGKWHADAIERQLAHQEQNEVRG  368
            +PIS +++N V+  LGY K  LT HG+R T S +L+E G  ++  IE QLAH ++N +RG
Sbjct  307  KPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKNSIRG  364

Query  369  AYIHAAEFWDERVRMMCWWADELDRLRD  396
            +Y H A++ D R  MM W AD +D L +
Sbjct  365  TYNH-AQYLDGRREMMQWYADYIDSLSE  391

516) Msil_1557 in NC_011666


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  230 bits (857),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 170/400 (43%), Positives = 264/400 (66%), Gaps = 19/400 (4%)

Query  1    MALTDMEIRAAKPSARIVKLSDGGGLQLWLMPDGAKRWRLAYRFAGGQKLLAIGVYPAIG  60
            MALTD+ +++AKP  R  KL+DGGG+ L + ++G+K WR+ YRFAG +K+L+IGVYP + 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LrearearegaKRILAEGNDPslakklakaakatasaNTFDAVSTELLDKKRREGKAER-  119
            L +ARE R  A++ILA G DP+ AKK  K A   +  NTF+AV+ E     +++ KA+R 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVARE-----WHQTKADRW  115

Query  120  TL---DKLGWLFSLAR-PAIGVRPIAEISAREILAVLRSVESRGTHETAKRLRATISEVF  175
            +L   D +   F     P IG RPIAEI + E+L  LR +E RG+ E  +++R   +EVF
Sbjct  116  SLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVF  175

Query  176  RYAVATDRADSDPTVALKGALAAPIVKHRAAIIEPKAFGGLLRAIATYEGSPETCaalel  235
            RYA+ T+RAD +P+  L +ALA+P  K + +++ ++ +  +L  +A Y GS  T +A ++
Sbjct  176  RYAIVTGRADYNPAPDLASALATPK-KVHFPFLTANELPHFLTDLAGYTGSIITKTATQI  234

Query  236  lalTFVRPGELRAAEWVEFDFDNGVWSIPGEKMKMKRPHRVPLAARAVGLLQELQTITGH  295
            + LT VR  ELR A+W ++DF+  +W IP+E MKMKRPH VP + + ++L+++L+ I+ H
Sbjct  235  IMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH  294

Query  296  GKFLFPSVRSAARCMSENTINAALRRLGFEKDEMTGHGFRSAASSMLNESGL---WNPDA  352
              ++F +   + + +S ++IN  +  LG+ K+ +TGHGFR + S++L+E G+   W    
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAW----  349

Query  353  IERQLAHVDNDSVRRAYARADYWDERIRMMSWWADRCEEL  392
            IE QLAHVD++S+R +Y +A+Y D R  MM W AD  + L
Sbjct  350  IEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

517) XCV2217 in NC_007508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  230 bits (858),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 175/410 (43%), Positives = 267/410 (66%), Gaps = 29/410 (7%)

Query  1    MPLTDTAIRKTKPGAVPLKLRDGGGLYLLMRPDGARWWRWDYRRPVTGKRNTLSLGTYPD  60
            M+LTD  ++ +KP   P KL DGGG+YLL+ ++G++ WR  YR   +GK + LS+G YPD
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   TGladarekrdaarkllaaGVDPGEQRKQAKQERAALVDAAGETFEVVAREWMARQTVAR  120
              LADAREKR  ARK+LAAG DPGE +K+   E+ AL  +  +TFE VAREW   ++   
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKE---EKIALQMSLKNTFEAVAREWHQTKA---  112

Query  121  VTAEKNRW-------LLETF---LFPEIGSRPIGEITPRELLDALRKIEATGKLETAARA  170
                 +RW       +++TF   +FP IG RPI+EI P ELL+ALRK+E  G LE   + 
Sbjct  113  -----DRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKV  167

Query  171  KIKAGQVFRYAMLEGKAEIDPTaslrgalkaakarhhaaVTEPAKIGQLLRAIEGFSGQP  230
            + + G+VFRYA++ G+A+ +P++ L +AL ++K  H + +T +  + ++L  + G++G  
Sbjct  168  RQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSI  226

Query  231  VTHAALKLAPLVFVRPGELRAAEWAEIDLDAAMWRIRPERMKMKAAHLVPLSSQAVAILR  290
            +T +A ++  L  VR  ELR A+W +ID++A +W I +E MKMK +H+VP S Q +A+++
Sbjct  227  ITKTATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFK  286

Query  291  DLHALTGGGHHVFPGLR-PNRPMSENTVNAALRALGYSGDEMTGHGFRSMAATRLNELGW  349
            +L++++     VF G   P +P+S +++N  +  LGY G  +TGHGFR   +T L+E G 
Sbjct  287  QLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQGF  345

Query  350  NADAVERQLAHAETNKVREAYTHAAQYLHERVRMMQAW-ADYLDGLRSVG  398
            N+  +E QLAH + N +R +Y H AQYL+ R  MMQ W ADY+D+L  ++
Sbjct  346  NSAWIEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQ-WYADYIDSLSELA  393

518) ELI_04005 in NC_007722


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 168/414 (41%), Positives = 260/414 (63%), Gaps = 31/414 (7%)

Query  1    MALSEIQIKKAKAAERPYKLADGEGLFLLVQKNGSKLWRLKYRYHGKEKLLSFGAYPEVG  60
            MAL+++++K AK+ ERPYKLADG G++LL++ NGSK WR+KYR+ GKEK+LS+G YP+V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   IAAARELKKVAKGVLAEGRDP----MVHKPGRDFEEAKTFRAIATMWHQNRASSLDPAHA  116
            +A ARE +  A+ +LA G DP      +K + +    +TF A+A  WHQ +A        
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  117  KRVWSRMDQDVFPDLGELMMHEITPPEVLKVIRKIEERGALDISRRAKQCIGQVFQFAIA  176
              +    ++D+FP +G   + EI P E+L  +RK+E RGAL+  R+ +Q  G+VF++AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  177  SGLCDSDPTAHLRGALKPRPRVKHMAKLPLAQLPELMIKIGQYQEEGERRSEITRAALNF  236
            +G  D +P+++L +AL    +V H + L   +LP+++  ++ Y       S IT++A ++
Sbjct  181  TGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTG-----SIITKTATQI  234

Query  237  ALLTWVRTKELRFAKKHEFEDMGGPSPVWRIGADRMKMGREHIVPLSRQAASLAQDL--I  294
             +LT VRT+ELRFA   + ED++  + +W I A+ MKM R HIVP S Q  +L ++L  I
Sbjct  235  IMLTGVRTQELRFA---HWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPI  291

Query  295  SKSEGKYVFPGQK-PKMPLSENTMIYGLYRLGYHGRQTVHGFRGLASTWANEQLVEVGDP  353
            SK +   VF G++ P+ P+S +++   +  LGY GR T HGFR   ST  +EQ       
Sbjct  292  SKHHP-LVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQ-------  343

Query  354  PMWIRRYHEDWVELQLAHSEENEVRGAYNAAEYLAPRRAMLQDW-ADFLDSIGG  406
                  ++  W+E+QLAH + N +RG+YN A+YL  RR M+Q W AD++DS++ 
Sbjct  344  -----GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSE  391

519) HEAR0701 in NC_009138


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  229 bits (852),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 158/393 (41%), Positives = 267/393 (68%), Gaps = 5/393 (1%)

Query  7    PLTDLQVRTAKPVVGKAHTLADGLGMYLEITAVGTKIWRMSYRQENGKQNRLTFGSYPEI  66
            +LTD++V+TAKP   ++  LADG GMYL I A G+K WRM YR   GK++ L++G YP++
Sbjct  2    ALTDVKVKTAKPK-ERPYKLADGGGMYLLINANGSKYWRMKYRF-AGKEKMLSIGVYPDV  59

Query  67   SLTearakraearkllaDGIDPAQFKREAKEAKAIAGTHTFETVAHAWLKKTSAMRASTT  126
            +L++AR KR+EARK+LA G DP++ K+E K A  ++  +TFE+VA+ W +  +  ++   
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  QEKVTNWLQKDVFPFIGHMPVSLIKPLNVLTTVQKMEARGSVESAHRVKQICGQVLRYAV  186
            ++ + + ++KD+FP+IG  P++ IKP+++L +++KME RG++E  ++V+Q CG+V+RYA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  ATGLAERDVTADLKGALSVVPKTNYAAIIEPKQAGVLLRSIFGYTGHPYAVAALKLSPLL  246
             TG A+ + ++DL +AL+   K ++ +++ +++   +L  + GYTG   + +A ++  L 
Sbjct  180  VTGRADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIMLT  238

Query  247  FVRPGELRSAEWKEIDLDAAEWRIPGEKMKMKIDHLVPLSTQAIEILRNVHAMTGHGKYV  306
             VR  ELR A+W +ID++A  W IP+E MKMK  H+VP S Q I +++++++++ H   V
Sbjct  239  GVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLV  298

Query  307  FPSIRTYERCMSENTINAALRSMGYDKETMTAHGFRAMARTIMDEVLGERVDLIEHQLAH  366
            F +     + +S ++IN  +  +GY K  +T+HGFR    TI++E  G     IE QLAH
Sbjct  299  FIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  367  AVKDPNGRAYNRTAHLPARRQMMQRWADYLDSL  399
              K++   +YN++  L +RR+MMQ+ ADY+DSL
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

520) Pmen_3996 in NC_009439


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  228 bits (850),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 164/386 (43%), Positives = 257/386 (67%), Gaps = 10/386 (2%)

Query  1    MPLTDVKIRQAKPGPSPIKMADGAGLHLEVRPNGSKLWRYRYRLDGKENTFAIGAYPDVS  60
            M+LTDVK++ AKP   P K+ADG+G+ L + +NGSK WR +YR+ GKE+ ++IG YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadaraerdvarehvraGRHPSHVRQTEKATQLAENRNTFKVVAEEWIEDRLGQRSQTYR  120
            LADAR  R  AR  + AG +P++ ++ EK +     +NTF  VA EW + + +++S  YR
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  DQCRRAFVNDVYPAIGRMPMREITAAQVLAILRKMDGRGATTLALQVRQWISAVFRFGVa  180
            D+   +F +D++P IG+ P+ EI + ++L  LRKM+ RGA     +VRQ+ + VFR+++ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  tlradadpaaalkgaIQRKAINHSQPMSREQLGEYLAAVDRYKGHRGTVIALKLLPMLFT  240
            T RAD +PA+ L +A+      H   ++ ++L ++L+ +  Y G   T  A +++ +   
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  241  RTGELRCARWPEFDLDGAMWEIPAERMKMRRKHLVPLPHQAVELLRELRKITAGE-LLFP  299
            RT ELR A+W ++D+++ +WEIPAE MKM+R H+VP ++Q + L+++L  I+  + L+F 
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI  300

Query  300  GLRDPARPISPTTLNRALEYLDMRGW-HCHDFRATASTHLYEMG---RWRSEVIELQLAH  355
            G  DP +PIS  ++N+ +E L+ +G+   H+FR T ST L E G    W    IE+QLAH
Sbjct  301  GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAW----IEMQLAH  356

Query  356  VERNKVRAAYNHAQYLAERREMMQAW  381
            V++N +R++YNHAQYL  RREMMQ W
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQ-W  381

521) ybl123 in NC_012892


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  228 bits (848),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 121/295 (42%), Positives = 204/295 (70%), Gaps = 15/295 (5%)

Query  1    MALTDAKIRAAKPTDKAYKLTDGAGMLMLVHPNSSRYWRLRYRILGKEKTLALGVYPEVS  60
            MALTD K+++AKP +++YKL+DG+GM +L+++N+S+YWR++YR+ GKEK L++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LSEARAKRDEARKLISAGIDPCEQKRAKKVVPDLQL--SFEHIARRWHASNKQ-WTQSHS  117
            L++AR KR EARK+++AG DP E K+  K+  ++ L  +FE +AR WH ++ + W+    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  DKVLKSLETHVFPFIGNRDITKLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQ  177
            D ++ ++E ++FP+IG+R I+ ++  +LL ++R  E +   E   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  SGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTRLAVMLNLLVFI  237
            +G   YNPA D+A+AL+T K+ H P L  + LP++L+ +++Y G  +T+ A  + +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRYARWSEIDIENAMWTIPAEREPLPGVNFSHRGSKMRTPHLVPLSKQAVP  292
            R+ ELR+A+W +ID+E  +W IPAE              KM+ PH+VP S Q ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIA  283

522) UMNK88_5213 in NC_017641


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  227 bits (846),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 131/304 (44%), Positives = 212/304 (70%), Gaps = 14/304 (4%)

Query  1    MALSDVKVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLALGKYPEVS  60
            MAL+DVKV++AKP  ++YKL+DG GM LL+++NGSKYWR++YRF+GKEKML++G YP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LadararrdearKLLANGVDPSENKKAVKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G DP+E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMRFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   + R+A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELHFARWSEVDFETAMWTIPGEREQLEGVKHSQRGSKMRTPHLVPLSRQALSILEKI  298
            R+ EL+FA+W ++DFE+ +W IP+E              KM+ PH+VP S Q ++++ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  299  KSMS  302
             ++S
Sbjct  289  EPIS  292

523) mll5763 in NC_002678


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  227 bits (846),  Expect = 8e-61, Method: Compositional matrix adjust.
 Identities = 162/398 (41%), Positives = 253/398 (64%), Gaps = 16/398 (4%)

Query  1    MSLSDFTCKNAKPKDKPYRLADGDGLYLLVRNNGSKLWQLRYRYLEKENILSFGKYPLVS  60
            M+L+D   K AKPK++PY+LADG+G+YLL+  NGSK W+++YR+  KE++LS+G YP V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LLDARGKRDDAKRLLIAGISPSTKRKEEKTAAITEARTTFALVAEEYVTRMEE------R  114
            L DAR KR +A+++L AG  P+  +KEEK A     + TF  VA E      +      R
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  115  DAAAATISKTKWLLEDLAGPLAKRPINEITPAEIFQLLQKIEKSGRRETARRLRSVIGSV  174
            D    T+ K      D+   ++KRPI EI P E+++ L+K+EK G  E  R++R   G V
Sbjct  121  DEIIDTFEK------DIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEV  174

Query  175  FRLAIVTLRAEADPTLHLRGALQPPKVNGRAAITDENKFGKLLMTVDEYDGWPTIKAALQ  234
            FR AIVT RA+ +P+ +L +AL  PK + + ++   N +  +L  +  Y G    K+A Q
Sbjct  175  FRYAIVTGRADYNPAPDLASALATPK-KVHFPFLTANELPHFLTDLAGYTGSIITKTATQ  233

Query  235  FLALTCVRPGEVRGATRDEFDRKKAVWHIPAERMKMRAPHDVPLSKQALSVLEEVWQLSE  294
            ++ LT VR  E+R A ++++D    +W+IPAE MKM+ PH VP S Q ++++ ++  +S 
Sbjct  234  IIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISK  293

Query  295  DGGLVFPSIRSTKRPLSENAMNAALRRMGYGKDEVTAHGFRVTASTILNARDYDPDVIEA  354
            +  LVF +    ++P+S +++N  +  +GY K+ +T+HGFR T STIL+ +++++  IE 
Sbjct  294  HHPLVFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAWIEM  352

Query  355  VLAHQDKNAIRRTYNRATYWNQRVTLMQEW-GDLLDAL  391
             LAH DKN+IR TYN+A Y + R  +MQ W +D +D+L
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

524) Sala_0444 in NC_008048


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  226 bits (841),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 171/410 (42%), Positives = 259/410 (64%), Gaps = 29/410 (7%)

Query  1    MPLTETQAKNAKPRERAYKLADSEGLFLLVQPNGTKLWRMKYRFAGKEKLLSFGAYPALG  60
            M+LT+ + K AKP+ER+YKLAD+ G++LL+++NG+K WRMKYRFAGKEK+LS+G YP + 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   IaaardkrkaakallaEGKDPMKAKRE----VISENGDTFYMVAKRWHENRQSALNPAHA  116
            +A AR+KR  A+ +LA G DP  AK+E    +     +TF  VA+ WH+ +    +    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  117  ERVWSRMERDVFPSLGQRLIHEITAPEVLEMIRKIEIRGALDISRRAKQGVGQVFQFAIA  176
            + +    E+D+FP +G+R I EI + E+LE +RK+E RGAL+  R+ +Q  G+VF++AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  177  CGLASSDPTAHLSGALKPRPRVKHMSRLPLDEVPAFLEKLRAYQEEGDRRSAITRDAVLF  236
             G A  +P+++L++AL    +V H + L  +E+P FL  L +Y       S IT+ A  +
Sbjct  181  TGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTG-----SIITKTATQI  234

Query  237  ALLTWVRTKELRLAVKSEFENLDGTDTVWRIPAARMKMGREHLVPLSAQAALIARKMVST  296
             +LT VRT+ELR+A   + E++D    +W IPA  MKM R H+VP S Q   + +++ + 
Sbjct  235  IMLTGVRTQELRFA---HWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPI  291

Query  297  ATGDHL-FPG-THPDKPLSENTMIYALYRLGYHSRQTIHGFRGLASTWANEQLVEFGKPA  354
            +  + L F G  +P KP+S +++   +  LGY +R T HGFR   ST  +EQ        
Sbjct  292  SKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQ--------  343

Query  355  MWIRKYHEDWVEMQLAHSEKNDVRGAYNAAEYLAPRRRMMQDW-ADFLDG  403
                 ++  W+EMQLAH +KN +RG+YN A+YL  RR MMQ W AD++D+
Sbjct  344  ----GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDS  388

525) BCAL1118 in NC_011000


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  225 bits (838),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 167/398 (42%), Positives = 255/398 (65%), Gaps = 16/398 (4%)

Query  1    MPLTDVTIRKASPREKPYRLADGGGMYLEVSPSGGKYWRFKYRFAGKEKRLALGVYPDVP  60
            M+LTDV ++ A P+E+PY+LADGGGMYL ++++G+KYWR KYRFAGKEK L++GVYPDV 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LaaarekrdearkTLAGGVDPGeakkaekraallaaTNSFEAVALGWMEERKPYVTSGSW  120
            LA AREKR EARK LA+G DPGEAKK EK A  ++  N+FEAVA  W + +     ++ W
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTK-----ADRW  115

Query  121  G-----KTKARFVKDVFPWLGKRPIAEIDAPEVLTVLKRIDSRGARFTAHKVRSEISRVF  175
            +          F KD+FP +GKRPIAEI + E+L  L++++ RGA    +KVR   + VF
Sbjct  116  SLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVF  175

Query  176  RYGIKEGYCKVDAARDLTDAIPPAQTTHFASITDPEKVGAMLRAFDGFSGTFPVLCALKL  235
            RY+I  G    ++A DL+ A++ ++  HF+ +T  E +   L  + G++G++    A ++
Sbjct  176  RYAIVTGRADYNPAPDLASALATPKKVHFPFLTANE-LPHFLTDLAGYTGSIITKTATQI  234

Query  236  APMLFTRPGELRKAEWAQFDLDKGEWRYL--VTKTKTEHLVPLAQQAIQILRELHALTGS  293
              +   R  ELR A+W ++D++   W     V K K  H+VP ++Q I ++++L++++  
Sbjct  235  IMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKH  294

Query  294  GRYVFPGARSALRPMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIE  353
               VF G   + +P+S  ++N  +  LGY  R  +TGHGFR    TILHE+   ++  IE
Sbjct  295  HPLVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIE  351

Query  354  HQLAHAVPDNLGKAYNRTKFIKERRAMMQKWADYLEKL  391
             QLAH   +++  +YN+++++  RR MMQ  ADY++ L
Sbjct  352  MQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

526) PP1Y_AT14494 in NC_015580


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  225 bits (837),  Expect = 4e-60, Method: Compositional matrix adjust.
 Identities = 169/410 (42%), Positives = 258/410 (63%), Gaps = 29/410 (7%)

Query  1    MPLTETQARNSKPSDRAYKLADGEGLFLFVQPNGSKLWRMKYRFAGKEKLLSFGAYPDLG  60
            M+LT+ + + +KP +R+YKLADG G++L++++NGSK WRMKYRFAGKEK+LS+G YPD+ 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   IaaarakrtaakallaEGKDPTKS-KGEVISQE---SATFFDVAKRWHENRKSALNAAHA  116
            +A AR KR+ A+ +LA G DP  + K E I+ +     TF  VA+ WH+ +    +    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  117  ERVWSRMERDVFPAIGEKLVHEITAPDVLAMIRKIEARGALDISRRAKQGVGQVFQFAIA  176
            + +    E+D+FP IG + + EI + ++L  +RK+E RGAL+  R+ +Q  G+VF++AI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  177  CGLASNDPTTHLRGALKPRPRVKHMSRLPLSELPAFIEKLHAYQEDGERRSSITRDAVLF  236
             G A  +P+ +L +AL    +V H + L  +ELP F+  L +Y       S IT+ A  +
Sbjct  181  TGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTG-----SIITKTATQI  234

Query  237  ALLTWVRTKELRFAAKSEFEDLGGKSPVWRIPAERMKMGREHLVPLSQQATHIAKSMIAA  296
             +LT VRT+ELRFA   + ED++  + +W IPAE MKM R H+VP S+Q   + K + + 
Sbjct  235  IMLTGVRTQELRFA---HWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPI  291

Query  297  APGE-FLFPG-NGPNKPLSENTMIYALYRLGYHSRQTVHGFRGLASTWANEQLVEFGKPP  354
            +  + ++F G N+P KP+S +++   +  LGY +R T HGFR   ST  +EQ        
Sbjct  292  SKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQ--------  343

Query  355  MWIRKYHEDWVELQLAHSEKNDVRGAYNAAEYLAPRRRMMQDW-ADYLSG  403
                 ++  W+E+QLAH +KN +RG+YN A+YL  RR MMQ W ADY+ +
Sbjct  344  ----GFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDS  388

527) SG2104 in NC_007712


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  224 bits (835),  Expect = 3e-60, Method: Compositional matrix adjust.
 Identities = 124/289 (43%), Positives = 200/289 (70%), Gaps = 6/289 (2%)

Query  1    MALSDVKVRAAKPEAKAYKLKDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLELGQYPEVL  60
            MAL+DVKV++AKP  ++YKL DG GM LL+++NGSKYWR++YRF+GKEKML +G YP+V 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LADARSRRDEARKLLANGINPIENKKAIKVEQEQE-AITFEVVARDWHASN-QKWSASHS  118
            LADAR +R EARK+LA G +P E KK  K+  +     TFE VAR+WH ++ ++WS    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  ARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLEVAARLQQRTTAIMCFAVQ  178
              ++ ++E ++F  IGKR IAE+K  +LL +++ +E  G LE   +++QR   +  +A+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  SGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFI  238
            +G  DYNPA ++A+A+AT+K+ H + L  N +P++L  +  Y+G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  239  RSSELRFARWPEVDFDTAKWTIPGEREPLEGVKHSQVVRRCGRFI-LYR  286
            R+ ELRFA+W ++DF++  W IP+E   +  +K++++V    + I L++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE---VMKMKRPHIVPPSEQVIALFK  286

528) PCC21_004050 in NC_018525


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  221 bits (823),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 166/411 (41%), Positives = 262/411 (64%), Gaps = 33/411 (8%)

Query  1    MKLNARQVETAKPKEKTYKMADGGDLYLEITTRGSKYWRMKYRRPIDKKEDRLAFGVWPT  60
            M L   +V TAKPKE+ YK+ADGG++YL I + GSKYWRMKYR  +  KE  L++GV P 
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   VTladarakrdeakkllVQGIDPKAEQKEVQAESEGAY--TFETVARQ-QQALGD-----  112
            VTLADAR KR EA+K+L  G DP   +KE +   + +   TFE+VAR+ +Q+ +D     
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  113  YHRSRVIRYLEMYISPEIGASDIRKLKTSHLLAPIKAVDASGKHDVAQRLQQRITAIMRY  172
            Y R  +I  +E  I P IG   I  +K  +LL +++ ++  G  +  ++++QR   + RY
Sbjct  119  Y-RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  173  AVQNDYIESNPAGDMAGALTTTKARHYPALPSVRFPEFLSRLAAYRGRLLTRCAVELMLL  232
            A+  +  + NPA D+A+AL+T K  H+P L +  +P+FL+ LA+Y G ++T+ A ++++L
Sbjct  178  AIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  233  TFVRSSELRFAQWREFDFDSAEWRIPAQREEIEGVRYSYRGMKMKEEHVVPLSNQALAVL  292
            T VR+ ELRFA+W ++DF++  W IPA+             MKMK  H+VP S+Q +A++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALF  285

Query  293  AKLHALSGDNPRLFPSDHNPEKVMSENTVNSALRTMGYDTKTEVCGHGFRTIARGALGES  352
             +L+++S ++P +F + ++P K +S +++N  +  +GY  K  + GHGFR      L E 
Sbjct  286  KQLEPISKHHPLVFIGRNDPRKPISKESINQVIELLGY--KGRLTGHGFRHTMSTILHEQ  343

Query  353  GL---WSDDAIERQLSHSERNNVRAAYIHTSEYLDERRLMVQWWADYLDII  400
            G+   W    IE QL+H ++N++R++Y H ++YLD RR M+QW ADY+D +
Sbjct  344  GFNSAW----IEMQLAHVDKNSIRGTYNH-AQYLDGRREMMQWYADYIDSL  389

529) Dd703_3223 in NC_012880


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  220 bits (821),  Expect = 8e-59, Method: Compositional matrix adjust.
 Identities = 158/391 (41%), Positives = 251/391 (65%), Gaps = 6/391 (1%)

Query  7    PLTDTEIKAAKPQEADYTLHDGDGLQLLIKSSGRKVWQMRYYRPLTKKRVKLTFGPYPEV  66
            +LTD  +K+AKP+E  Y L DG+G+ LLI+++G K W+M+Y   ++ K   L++G YP+V
Sbjct  2    ALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKY--RFAGKEKMLSIGVYPDV  59

Query  67   TladarqrrtaarallVKDIDPYEHQLSLRKQALETQSNTFKVVAERWLQLKKSSVTADY  126
            TLADAR++R+ AR +L  + DP E +   +     +  NTF  VA  W Q K    +  Y
Sbjct  60   TLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRY  119

Query  127  ASDIRRSLEKDIFPAIGDISITDIKARTLVQAIQPVQARGALETVRRLCQRINEVMIYAM  186
              +I  ++EKDIFP IG  +I++IK+  L++A++ ++ RGALE +R++ QR  EV  YA+
Sbjct  120  RDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAI  179

Query  187  NVGLIDAAPSVNISKAFEKPQKKHMPSIRPDQLPQLMQTMR--LANIELPTCCLFMWQLL  244
              G  D  P+ +++ A+  P+K H P + +++LP+++  +    ++I   T   ++  +L
Sbjct  180  VTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQII--ML  237

Query  245  TLTRPVEAAETRWQEIDLDAKEWRIPAERMKMKRVHIVPLSEQALAILELMRPLSSHREY  304
            T  R  E   ++W++ID++AK W IPAE MKMKR HIVP SEQ +A++  + P+S H+  
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  305  VFPSRIKPLQPMNSQTVNAALKRAGLGGILVSHGMRSIASTALNEQGFPPDVIEAALAHV  364
            VF +R  P +P++ +++N  +   G  G L +HG R   ST L+EQGF +  IE  LAHV
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWIEMQLAHV  357

Query  365  DKNEVRRAYNRSDYLEQRRPMMQWWADFVKA  395
            DKN +R +YN+++YL+ RR MMQW AD++ +
Sbjct  358  DKNSIRGTYNHAQYLDGRREMMQWYADYIDS  388

530) BDL_973 in NC_021884


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  219 bits (815),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 131/288 (46%), Positives = 198/288 (69%), Gaps = 3/288 (1%)

Query  1    MPLTDKAVKNAKAGDKPVKLFDGGGMFLLVTPAGQRYWRLKYRVNGKEKLLALGVYPDVS  60
            M+LTD  VK AK+ ++P KL DGGGM+LL+ + G +YWR+KYR  GKEK+L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAVARKKRDEAREKLAAGIDPNEAKREVKRTARIAAASSFEAVAREWFDNQRVGWTETYA  120
            LA AR KR EAR  LAAG DP EAK+E K + +++  ++FEAVAREW + +   W+  Y 
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  EKVIHSLEIDAFPKIGSRPISSIEAPEMLEIIRAIEARGVRETAKRLLQRSRAVFQYAIM  180
            + +I+++E D FP IG RPI+ I + E+LE +R +E RG  E  +++ QR   VF+YAI+
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  TGRCTRNPSADIDAETILKKGPGVQHMARVKPLEIPQLMRDIAAYPGEPVTRLALELMAL  240
            TGR   NP++D+ +       P   H + + + E+P+++ D+A+Y G  +T+ A +++ L
Sbjct  181  TGRADYNPAPDLASALA---TPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  TFVRTKEMIRAQWAEFDEAAAEWRVPPERMKMRDPHIVPLSRQSLVVL  288
            T VRT+E+  A+W ++D  A  W +P+E MKM+ PHIVP S Q + ++
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALF  285

531) BTI_453 in NC_021173


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  217 bits (808),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 159/393 (41%), Positives = 253/393 (65%), Gaps = 6/393 (1%)

Query  1    MPLTDVAIRKAAPREKPYRLADSGGMYLEVSPAGGKYWRLKYRFLGKEKRLALGVYPDVS  60
            M+LTDV ++ A P+E+PY+LAD+GGMYL +++ G+KYWR+KYRF GKEK L++GVYPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   laaarekrddarkklaaGVDPSEakkadkraarlaaTNSFEAVALGWMDELKPYVTAGSM  120
            LA AREKR +ARK LAAG DP+EAKK +K A +++  N+FEAVA  W +      +    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  AKTKARFEKDVFPWIGKRPVAEIDAPEVLTVLKRIDSRGARFTAHKIRGEISRAFRYGIK  180
                  FEKD+FP IGKRP+AEI + E+L  L++++ RGA    +K+R   +  FRY+I 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  181  EGYCKFDPARDLVSAIPPAQTTHFASITEPAKVGAMLRAFDGFSGTFPVLCALKLAPMLF  240
             G   ++PA DL SA++ ++  HF+ +T +  +   L  + G++G++    A ++  +  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  241  TRPGELRKAEWAQFNLDKGEWRYL--VTKTSTEHLVPLAAQAVQILRELHALTGHGRYVF  298
             R  ELR A+W +++++   W     V K    H+VP + Q + ++++L++++ H   VF
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVF  299

Query  299  PGARTAQRPMSDAAVNAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAH  358
             G   +++P+S  ++N  +  LGY  R  +TGHGFR    TILHE+   ++  IE QLAH
Sbjct  300  IGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQ-GFNSAWIEMQLAH  356

Query  359  AVPDTLGKAYNRTKFIKERKAMMQKWADYLERL  391
               +++  +YN+++++  R+ MMQ  ADY++ L
Sbjct  357  VDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

532) SBOV27691 in NC_022241


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  217 bits (806),  Expect = 9e-58, Method: Compositional matrix adjust.
 Identities = 136/335 (41%), Positives = 211/335 (63%), Gaps = 0/335 (0%)

Query  1    MMGLGAFPALSLADARGLRADYLALLANGIDPQIQTEVAEEQQQIALDSIFSTVAANWFQ  60
            M+++G +P ++LADAR  R++   +LA G DP           Q++L + F +VA +W Q
Sbjct  50   MLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQ  109

Query  61   LKSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLVQ  120
             K+   +  Y  +I  ++EKD+FP IG  P+ +IK+  L+EAL  +  RGALE +R++ Q
Sbjct  110  TKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQ  169

Query  121  RINEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVSTR  180
            R  E+  YA+ TG  D NPA++++ A+  PKK + P L ++ELP ++  L     S+ T+
Sbjct  170  RCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITK  229

Query  181  CLIEWQLLTLVRPSEASGARWAEIDLDAKLWTIPAERMKAKREHIVPLSTQALEILEVMK  240
               +  +LT VR  E   A+W +ID++AKLW IPAE MK KR HIVP S Q + ++  + 
Sbjct  230  TATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLE  289

Query  241  PISAHREHVFPSRNDPKQSMNSQTANAALKRIGYGGKLVAHGLRSIASTTLNEAGFNADV  300
            PIS H+  VF +RNDP+++++ ++ N  +  +GY G+L +HG+R   ST L+E GFN+  
Sbjct  290  PISKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAW  349

Query  301  IEAALAHTDKNEVRRAYNRSIYLKQRIGMMEWWGE  335
            IE  LAH DKN +R +YN++ YL  R  MM+W ++
Sbjct  350  IEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYAD  384

533) LFML04_0012 in NC_018649


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  215 bits (801),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 143/340 (43%), Positives = 226/340 (67%), Gaps = 6/340 (1%)

Query  1    MGVYPETSLrearerrdeakkkieSGIDPSHARKAKKESDSGA--DTFETIAREWFEKFS  58
            +GVYP+ +L +ARE+R EA+K + +G DP++A+K  K +   +  +TFE++AREW +  +
Sbjct  53   IGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKA  112

Query  59   PTWSPSHGDRIIRRLERDIFPWLGKRSIKDIKAPEFLAVLRRIESRGAVETAHRASQNCG  118
              WS    D II  +E+DIFP +GKR+I +IK+ E+L  LR++E RGA+E  ++  Q CG
Sbjct  113  DRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCG  172

Query  119  QVFRYAAAMGRTEGDPSGDLRGAIPPTTTKHHASITDPKEIGGLLRAIDSYEGGLVVRCA  178
            +VFRYA   GR++ +P+ DL +A+ +T  K H ++  ++E+  +L  + +Y G+++ + A
Sbjct  173  EVFRYAIVTGRADYNPAPDLASAL-ATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTA  231

Query  179  LKLAPLVFVRPGELRRAEWSEIDFEKMEWRIPAEKMKMREQHIVPLSRQALGILRELQPL  238
             ++  L  VR  ELR A+W +IDFE   W IPAE MKM+  HIVP S Q ++++++L+P+
Sbjct  232  TQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPI  291

Query  239  TGEGKYLFPSPRSWDRPMSENAVLAALRRMGYSGDQMTGHGFRSMASTILIEQGWNRDAI  298
            + +   +F +     +P+S +++   +  +GY G ++TGHGFR   STIL EQG N   I
Sbjct  292  SKHHPLVFIGRNDPRKPISKESINQVIELLGYKG-RLTGHGFRHTMSTILHEQGFNSAWI  350

Query  299  ERQLAHAERDEIRAAYNYAQHLPERRKMMQAW-ANYLDEL  337
            E QLAH +++ IR++YN AQ L  RR MMQ W A+Y+D L
Sbjct  351  EMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

534) SBOV45841 in NC_022241


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  215 bits (802),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 145/360 (41%), Positives = 226/360 (63%), Gaps = 18/360 (5%)

Query  1    MALTDRAIVHAKPCGKPYKLSDSHGLYLLVNPNGSKRWYIKYRFVNKEKKLALGPYPLLT  60
            MALTD  +  AKP  +PYKL+D+ G+YLL+N+NGSK W +KYRF  KEK L++G YP +T
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LAQARRMREEAQLLLISGIDPSAHRKAER--LAITPEHTFESVAREWVISNVN-WSAEHK  117
            LA+AR  R EA+ +L +G DP+  +K E+  L ++  +TFE+VAREW  ++ + WS   +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  118  KRVLRYFELYVFPTNGSCDITKMKVKDLLVPIKEVEKAGKLDVASRLQQRTACVMRYAVQ  177
              ++  FE  +FP  G   I+ +K  +LL +++ +EK G L+   +++QR + V RYA+ 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  178  NGIIDHNPASDLTGAVSTPKVRHHPALDLNLIPDFLDRIDDYKGRqltqlavklalllFI  237
             G  D NPA+DL++A++TPK  H P L  N +P+FL  + +Y G  +T+ A ++ +L  +
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGV  240

Query  238  RSSELRFARWDEIDLRNAMWTIPAEREPIPGVKYSARGAKMHSPHLVPLSRQAIELLHEV  297
            R+ ELRFA+W++ID+   +W IPAE              KM  PH+VP S Q I L+ ++
Sbjct  241  RTQELRFAHWEDIDFEAKLWEIPAE------------VMKMKRPHIVPPSEQVIALFKQL  288

Query  298  RQHCRPGTELVFPGDHNYRKPMSENTINKALRVMGYDTQKDVCGHGFRTMACSALVESGL  357
                +    LVF G ++ RKP+S ++IN+ + ++GY  +  + GHGFR    + L E G+
Sbjct  289  EPISKHHP-LVFIGRNDPRKPISKESINQVIELLGYKGR--LTGHGFRHTMSTILHEQGF  345

535) XCV2615 in NC_007508


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  215 bits (799),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 165/401 (42%), Positives = 247/401 (62%), Gaps = 16/401 (3%)

Query  1    MPLTDTAIRKAKPTATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPE  60
            M+LTD  ++ AKP   P KL DG G+YLL+ ++G++ WR  YR   +GK + LS+G YP+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   VSLSDarerlaearrllaaKIDPGEQRKavkaageaaaaNSFEVIAREWFAKQQKDWSTQ  120
            V+L+DARE+ +EAR++LAA  DPGE +K  K A + +  N+FE +AREW   +   WS +
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  YADKIIRRLQSDIFPWIGSSPIAAITAPELLKHLERIEQRGAIETAHRALQTCGAVFRYA  180
            Y D II  ++ DIFP IG  PIA I + ELL  L ++E+RGA+E  ++  Q CG VFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  VRTGRAEADPTGALKGALTPWRSMPFaaattseeattLLRKIDISTSRPVVRSALRLAPL  240
            + TGRA+ +P+  L +AL+  + + F +  T++E   +L  +   T+  + ++A ++  L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  LFSRPGELVRMRWTELDLDAGQWRYF--VTKTKRTHIAALSTQAVEILRDLHPLTGRGEF  298
               R  EL   +W ++D++A  W     V K KR HI + S Q + ++++L+P++ +  +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  299  VFPGGRDPRKHMSGNAILVAARRCGIEKEESTIHGFRHMASTLLNEMG---DWNPDAIEA  355
            VF G  DPRK +S ++I       G  K   T HGFRH  ST+L+E G    W    IE 
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQGFNSAW----IEM  352

Query  356  ALTH-KMPGVRGIYNQAQYLDERRKMMQAW-GDYLDELKSM  394
             L+H    ++RG YN+AQYLD RR MMQ W +DY+D L  +
Sbjct  353  QLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLSEL  392

536) PFLU1878 in NC_012660


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  215 bits (800),  Expect = 4e-57, Method: Compositional matrix adjust.
 Identities = 164/405 (41%), Positives = 262/405 (65%), Gaps = 16/405 (3%)

Query  1    MALTDTAIKQAKPASKPYTLTDGDGLSLQVPTTGSKRWHFRFYWHDKQLRISLGTYPDVS  60
            MALTD  +K AKP  +PY L+DG+G+ L + + GSK W+ ++   +K+  +S+G YPDV+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKearrrreaaraLVASNIDPRSHRRAERQKASRAVKNTFEAVADRWHEFRSKKLTkskk  120
            L +AR +R  AR ++A+  DP   ++ E+     ++KNTFEAVA  WH+ ++ + +   +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  121  gsagqaskYLKKDMLPCLGDLPIADISRGDVLELIRRIERRGALVSARKVRTWLNQIFRF  180
            +   ++   + KD++P +G  PIA+I   ++LE +R++E+RGAL   RKVR +  ++FR+
Sbjct  121  DEIIDT---FEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRY  177

Query  181  AMAEGLIDVNPAADLDIVAETPRPVRHNPFLQVNELPGLLRTVTHYEGAEKtrlgirlll  240
            A+  G  D NPA+DL     TP+ V H PFL  NELP +L  ++ Y G+  T+ + ++++
Sbjct  178  AIVTGRADYNPAPDLASALATPKKV-HFPFLTANELPHFLTDLAGYTGSIITKTATQIIM  236

Query  241  ltgvrtgelrAATPDQFDFDKGIWRVPPEGVKQLRNRVRTQGNEIPPYVIPLSTQAIAIV  300
            LTGVRT ELR A  +++DF+  +W +P+E +K  R           P ++P S Q IA+ 
Sbjct  237  LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKR-----------PHIVPPSEQVIALF  285

Query  301  QRLMQLRTRGARYLLVHRYEPQEMISENTLNTAISRMGYKGRLTGHGIRATISTALNEVG  360
            ++L  + ++    +++ R +P+  IS +++N  I  +GYKGRLTGHG+R T+ST L+E G
Sbjct  286  KQLEPI-SKHHPLVFIGRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQG  344

Query  361  FVEEWIEAQLSHADSNQIRAAYNHAEYVEPRRRMMQYWADLLDAL  405
            F   WIE QL+H D N IR++YNHA+Y++ RR MMQ  AD +D+L
Sbjct  345  FNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

537) Smlt0056 in NC_010943


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  214 bits (797),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 170/395 (44%), Positives = 252/395 (64%), Gaps = 9/395 (2%)

Query  1    MPLTDTAIRKTKPSASVQKlrdggglylllrpdgAKWWRWDYRRPVTGKRNTLSLGTYPD  60
            M+LTD  ++ +KP     KL DGGG+YLL+ ++G+K WR  YR   +GK + LS+G YPD
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   VSLAVARERHVAARKLLAGGIDPGEHRKAQKKAVVESSASTFEAVAAEYFSMRAGKLSAE  120
            V+LA ARE++  ARK+LA+G DPGE +K +K A+  S  +TFEAVA E    +A++ S  
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  SISHERRIVERDLNPYLGRSPVGAIPARELLDALRRIESRGAVKTAHRARGIAGRVFRYA  180
               +     E+D+ PY+G+ P++ I + ELL+ALR++E RGA+   ++ R   G VFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  IATGRADRNPADDLRGALASSEVQHFPSITDPSLITGLLRATHGYQGSPVVQAALRLAPL  240
            I TGRAD NPA DL +ALA++   HFP +T   L   +L    GY GS + ++A ++  L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHFPFLTANEL-PHFLTDLAGYTGSIITKTATQIIML  237

Query  241  VFVRPGELRHALWDDIDLDAGQWRFTAT--KTGQPHIVPLAVQAVAILRELHPLTCRAKY  298
              VR  ELR A W+DID++A  W + A   K  +PHIVP + Q +A++++L+P++ +   
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  299  VFPCMIGKGRPMSENAVNGALRRLGYESGSMTGHGFRAMARTVLDEVLGFRPDYIEHQLA  358
            VF    +  +P+S +++N  +  LGY  G +TGHGFR    T+L+E  GF +  IE QLA
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQ-GFNSAWIEMQLA  355

Query  359  HAVRDPNGRAYNRTAHLVERAKMMQAW-ADYLDGL  392
            H  +++   +YN++  L  R  MMQ W ADY+D+L
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSL  389

538) XALc_1632 in NC_013722


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 161/376 (43%), Positives = 240/376 (64%), Gaps = 28/376 (7%)

Query  1    MRPDGARWWRWDYRRPNTGKRNTLSLGTYPDTGladardkrdaarkllaaGVDPGEQRKR  60
            + ++G++ WR  YR   +GK + LS+G YPD  LADAR+KR  ARK+LAAG DPGE +K 
Sbjct  30   INANGSKYWRMKYR--FAGKEKMLSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKK-  86

Query  61   AKEQAAMVAPAGETFETVARAWMARQTVARVTAEKNRW-------LLETF---LFPEIGS  110
              E+ A+  +  +TFE+VAR W   ++        +RW       +++TF   +FP IG 
Sbjct  87   -EEKIALQMSLKNTFEAVAREWHQTKA--------DRWSLRYRDEIIDTFEKDIFPYIGK  137

Query  111  RPIGEITPRELLDALRKIEATGKLETAGRAKIKAGQVFRYAMLEGKAEIDPTASLRGALK  170
            RPI+EI P ELL+ALRK+E  G LE   + + + G+VFRYA++ G+A+ +P++ L +AL 
Sbjct  138  RPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALA  197

Query  171  TVKARHHAAVTDPVKIGQLLRAIEGFIGQPVTHAALKLAPLVFVRPGELRAAEWGEIDLD  230
            T K  H + +T    + ++L  + G+ G  +T +A ++  L  VR  ELR A+W +ID++
Sbjct  198  TPKKVHFPFLTAN-ELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHWEDIDFE  256

Query  231  AAMWRIRPERMKMKAAHLVPLSSQAVAILRDLHALTGGGPHVFPGLR-PNRPMSENTINS  289
            A +W I +E MKMK +H+VP S Q +A++++L++++   P VF G   P +P+S ++IN 
Sbjct  257  AKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFIGRNDPRKPISKESINQ  316

Query  290  ALRALGYSGDEMTGHGFRSMAATRLNEMGWNADAIERQLAHAETNKVREAYTHAAQYLPE  349
             +  LGY G  +TGHGFR   +T L+E G N+  IE QLAH + N +R +Y H AQYL  
Sbjct  317  VIELLGYKG-RLTGHGFRHTMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNH-AQYLDG  374

Query  350  RVRMMQAW-ADYLDSL  364
            R  MMQ W ADY+DSL
Sbjct  375  RREMMQ-WYADYIDSL  389

539) xccb100_1868 in NC_010688


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  201 bits (748),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 165/394 (42%), Positives = 246/394 (63%), Gaps = 8/394 (2%)

Query  1    MPLTDTAIRRAKPAATPQKLRDGNGLYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPE  60
            M+LTD  ++ AKP   P KL DG G+YLL+ ++G++ WR  YR   +GK + LS+G YP+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYR--FAGKEKMLSIGVYPD  58

Query  61   VSladarerlaearrlvaaKIDPGEQRKavkaageaaaaNSFEVVAREWFAKQQKEWSPQ  120
            V+LADARE+ +EAR+++AA  DPGE +K  K A + +  N+FE VAREW   +   WS +
Sbjct  59   VTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLR  118

Query  121  YAEKIIRRLQSDIFPWIGSSPIAAITAPELLKHLERIEQRGAIETAHRALQTCGAVFRYA  180
            Y + II  ++ DIFP IG  PIA I + ELL  L ++E+RGA+E  ++  Q CG VFRYA
Sbjct  119  YRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYA  178

Query  181  VRTGRAEADPTGALKGALTPWRSMPFaaattseeattVLRKIDISTSRPVVRSalrlapl  240
            + TGRA+ +P+  L +AL+  + + F +  T++E    L  +   T+  + ++A ++  L
Sbjct  179  IVTGRADYNPAPDLASALATPKKVHF-PFLTANELPHFLTDLAGYTGSIITKTATQIIML  237

Query  241  lfarpGELVRMRWTELDLDAGQWRYF--VTKTKRTHIAALSTQAIEILRDLHPLTGRGEF  298
               R  EL   +W ++D++A  W     V K KR HI + S Q I ++++L+P++ +  +
Sbjct  238  TGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPL  297

Query  299  VFPGGRDPRKHMSGNAILVAARRCGIEKDESTIHGFRHMASTLLNEMGHWNPDAIESALT  358
            VF G  DPRK +S ++I       G  K+  T HGFRH  ST+L+E G  N+  IE  L+
Sbjct  298  VFIGRNDPRKPISKESINQVIELLGY-KGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLA  355

Query  359  H-KMPGVRGIYNQAQYLDERRKMMQSWADNLDTL  391
            H    ++RG YN+AQYLD RR MMQ  AD +D+L
Sbjct  356  HVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSL  389

540) MICA_2176 in NC_016026


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  200 bits (745),  Expect = 5e-53, Method: Compositional matrix adjust.
 Identities = 133/301 (45%), Positives = 203/301 (68%), Gaps = 7/301 (2%)

Query  16   QNTFKAVALEWHERQLDRWSENHALNVMRRFDIDIFPYIGSRPIADIDAPELLEVLRRIE  75
            +NTF AVA EWH+ + DRWS     +++  F+ DIFPYIG RPIA+I + ELLE LR++E
Sbjct  97   KNTFEAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKME  156

Query  76   KRGSLDVAARVKQICGQVFRYGIATGRCKRDHAADLRGALKTAKTQHYPALDIKEMPEFL  135
            KRG+L+   +V+Q CG+VFRY+I TGR   + A+DL +AL T+K  H+P L  +E+P+FL
Sbjct  157  KRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFL  216

Query  136  KALERNEPRLFSRTRKGIRLLMLTFVRTSELIKATWDEFDLEEGRWVIPAERMKVGGAHT  195
              L      ++++T  + +++MLT VRT EL  A W+++D+E   W IPAE MK+  +H 
Sbjct  217  TDLAGYTGSIITKT--ATQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHI  274

Query  196  VPLSRQAikilkelkeeTEHLNVKWVFPSQVRPKEHMSNNTLLFAIGRLGYKGRMTGHGF  255
            VP S Q I ++K+L   + H  +  VF ++  P+  +S++++   I  LGYKGR+TGHGF
Sbjct  275  VPPSEQVIALFKQLEPISKHHPL--VFIGRNDPRKPISKESINQVIELLGYKGRLTGHGF  332

Query  256  RALAMSTIKENLGYRHEIVDRQLAHAHKSKIDRAYDRSKFLPDRIVMMQEW-ADYLDSVE  314
            R  +MSTI ++ G+    ++ QLAH +K+ I  +Y+++++L +R  MMQ W ADY+DS+ 
Sbjct  333  RH-TMSTILHEQGFNSAWIEMQLAHVDKNSIRGTYNHAQYLDGRREMMQ-WYADYIDSLS  390

Query  315  S  315
             
Sbjct  391  E  391

541) MCA0676 in NC_002977


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  181 bits (671),  Expect = 3e-47, Method: Compositional matrix adjust.
 Identities = 122/293 (42%), Positives = 195/293 (67%), Gaps = 3/293 (1%)

Query  1    MALTDTAVRSARPAEKAFKLADEKGLFLHVMPGGARYWRLKYRIGGKEKLMALGVYPEVS  60
            MALTD  V++A+P E+++KLAD  G++L + + G++YWR+KYR++GKEK++++GVYP+V+
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LKEararrdkaraLLGQGIDPNDHKKAAKRT--EAGEDSFERIALEWHARHMANKSESHA  118
            L +AR +R  AR +L+ G DP + KK  K +   +  ++FE +A EWH       S    
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  119  TKTLERLRKDVFPWIGNRPVREITAPELLSVLRRIESRGAIELCHVTKRICGQVMRYAIA  178
               ++ + KD+FP IG+RP+ EI + ELL  LR++E RGA+E  +  ++ CG+V RYAI 
Sbjct  121  DEIIDTFEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIV  180

Query  179  TGRAERDPAADLKGALQPVKARHFAAITDPKAIGELLRAIEEYTGHFATQCALKLSPLVM  238
            TGRA+ +PA+DL +AL   K  HF+ +T ++ + ++L  +  YTG + T+ A ++  L  
Sbjct  181  TGRADYNPAPDLASALATPKKVHFPFLT-ANELPHFLTDLAGYTGSIITKTATQIIMLTG  239

Query  239  LRPGEVRQaewaeidieaaewRIPAAKMKMRDEHIVPLSRQAVEILESIRPLT  291
            +R  E+R A+W +ID+EA  W IPA  MKM+  HIVP S Q + ++  + P++
Sbjct  240  VRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPIS  292

542) int in NC_006513


> GQ338312|1|G1|255348288|ACU09430.1|Escherichia_coli_71074|+|583..1764|int|-|integrase
Length=393

 Score =  142 bits (522),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 113/277 (41%), Positives = 179/277 (65%), Gaps = 13/277 (4%)

Query  1    MALSDLAVRQAKATGKAYTLPDLDGLSLAVTAAGGRTWHFRYYWAGKQKRMSLGTYPEVT  60
            MAL+D+ V+ AK+  ++Y L+D +G+ L + A G++ W+ +Y  AGK+K +S+G YP+VT
Sbjct  1    MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKMLSIGVYPDVT  60

Query  61   LREARSLRDEARALLAKGTNPRVHRKQKRTAVRLADENTFEAVYRKWLKHRG----LSLK  116
            L +AR  R EAR +LA G +P   +K+ + A++++  NTFEAV R W + ++    L  +
Sbjct  61   LADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTFEAVAREWHQTKADRWSLRYR  120

Query  117  EGRQTTLSILPRIFDKDVLPTLGKRSIYEIKRPDLLEVIAKIEKRKALSVAEKVRTWFNQ  176
            +    T       F+KD++P +GKR+I EIK  +LLE + K+EKR AL    KVR +  +
Sbjct  121  DEIIDT-------FEKDIFPYIGKRPIAEIKPMELLEALRKMEKRGALEKMRKVRQRCGE  173

Query  177  LFRYALVIVPGLEQNPASDLDVVALPLPPVNHNPFLRMADLPKLLQRLRKYrgrlqthlg  236
            +FRYA+V   + + NPA+DL   AL+ P   H PFL   +LP +L  L  Y G + T  +
Sbjct  174  VFRYAIVTGRA-DYNPAPDLA-SALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTA  231

Query  237  lrlllltgvrtgelrlATPDQFDLDRGLWIIPPDVVK  273
             ++++LTGVRT ELR+A  +++D++  LW IP++V+K
Sbjct  232  TQIIMLTGVRTQELRFAHWEDIDFEAKLWEIPAEVMK  268