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PAthogenisity Island DataBase (PAI DB)

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Homologs of int gene of FJ212134

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECSF_1824
( YP_003349814.1 )

phage integrase

NC_013654
(Escherichia coli SE15)

4e-118

2) ETEC_2075
( YP_006115641.1 )

integrase

NC_017633
(Escherichia coli ETEC H10407)

1e-117

3) EC042_2207
( YP_006096513.1 )

integrase

NC_017626
(Escherichia coli 042)

8e-118

4) ECP_1936
( YP_669837.1 )

P4-like integrase

NC_008253
(Escherichia coli 536)

1e-117

100

5) c2418
( NP_754310.1 )

prophage P4 integrase

NC_004431
(Escherichia coli CFT073)

1e-117

100

6) i14_2235
( YP_006154344.1 )

prophage P4 integrase

NC_017652
(Escherichia coli clone D i14)

1e-117

100

7) i02_2235
( YP_006149425.1 )

prophage P4 integrase

NC_017651
(Escherichia coli clone D i2)

1e-117

100

8) ECABU_c22350
( YP_006106291.1 )

site-specific recombinase

NC_017631
(Escherichia coli ABU 83972)

1e-117

9) LF82_294
( YP_002556846.1 )

Prophage P4 integrase

NC_011993
(Escherichia coli LF82)

1e-117

10) SFxv_2282
( YP_005727719.1 )

putative Integrase

NC_017328
(Shigella flexneri 2002017)

9e-112

11) S2152
( NP_837605.1 )

integrase

NC_004741
(Shigella flexneri 2457T)

9e-112

12) SFV_2047
( YP_689484.1 )

integrase

NC_008258
(Shigella flexneri 8401)

1e-109

13) APECO1_1051
( YP_853069.1 )

phage integrase

NC_008563
(Escherichia coli APEC O1)

7e-103

14) intA_2
( YP_008571903.1 )

Prophage CP4-57 integrase

NC_022370
(Escherichia coli PMV-1)

7e-103

15) UM146_07320
( YP_006110367.1 )

putative phage integrase

NC_017632
(Escherichia coli UM146)

7e-103

16) UTI89_C2177
( YP_541179.1 )

integrase

NC_007946
(Escherichia coli UTI89)

7e-103

17) A225_3768
( YP_006499462.1 )

integrase

NC_018106
(Klebsiella oxytoca E718)

2e-86

18) W5S_0472
( YP_006281470.1 )

P4-like integrase

NC_017845
(Pectobacterium sp. SCC3193)

7e-81

19) KPN2242_20085
( YP_005956463.1 )

putative phage integrase

NC_017540
(Klebsiella pneumoniae KCTC 2242)

1e-77

20) int
( YP_001337026.1 )

putative phage integrase

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

4e-77

21) S70_12490
( YP_006217036.1 )

prophage integrase

NC_017731
(Providencia stuartii MRSN 2154)

3e-75

22) KPR_0664
( YP_007989645.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

9e-73

23) PSF113_0326
( YP_005205757.1 )

integrase

NC_016830
(Pseudomonas fluorescens F113)

5e-71

24) O3O_02410
( YP_006786378.1 )

Prophage integrase

NC_018661
(Escherichia coli 2009EL-2071)

4e-68

25) AMEC673_10230
( YP_006799117.1 )

prophage CP4-like integrase

NC_018678
(Alteromonas macleodii English Channel 673)

5e-42

26) A1S_2908
( YP_001085916.1 )

integrase

NC_009085
(Acinetobacter baumannii ATCC 17978)

2e-37

• Sequence Alignments

1) ECSF_1824 in NC_013654


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  417 bits (1568),  Expect = 4e-118, Method: Compositional matrix adjust.
 Identities = 261/263 (99%), Positives = 262/263 (99%), Gaps = 0/263 (0%)

Query  58   LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  117
            LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  118  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  177
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  178  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  237
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  238  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKTMMQWWS  297
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARK+MMQWWS
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  298  DYLEACRESYAPPYTIGKNKFIP  320
            DYLEACRESYAPPYTIGKNKFIP
Sbjct  241  DYLEACRESYAPPYTIGKNKFIP  263

2) ETEC_2075 in NC_017633


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  416 bits (1564),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 259/263 (99%), Positives = 262/263 (99%), Gaps = 0/263 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDTVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  324
            DICGHGFRAMACSALMESGLWAKD+VERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  325  DYLEACRESYAPPYTIGKNKFIP  347
            DYLEACRESYAPPYTIGKNKFIP
Sbjct  241  DYLEACRESYAPPYTIGKNKFIP  263

3) EC042_2207 in NC_017626


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  416 bits (1566),  Expect = 8e-118, Method: Compositional matrix adjust.
 Identities = 260/263 (99%), Positives = 262/263 (99%), Gaps = 0/263 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  324
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  325  DYLEACRESYAPPYTIGKNKFIP  347
            DYLEACRESYAPPYTIGKNKFIP
Sbjct  241  DYLEACRESYAPPYTIGKNKFIP  263

4) ECP_1936 in NC_008253


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1562),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPApplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

5) c2418 in NC_004431


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1562),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPApplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

6) i14_2235 in NC_017652


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1562),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPApplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

7) i02_2235 in NC_017651


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1562),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 261/261 (100%), Positives = 261/261 (100%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPApplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

8) ECABU_c22350 in NC_017631


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1563),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 260/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

9) LF82_294 in NC_011993


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  415 bits (1563),  Expect = 1e-117, Method: Compositional matrix adjust.
 Identities = 260/261 (99%), Positives = 260/261 (99%), Gaps = 0/261 (0%)

Query  87   VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAY  146
            VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIGAY
Sbjct  3    VASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAY  62

Query  147  HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  206
            HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM
Sbjct  63   HQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKM  122

Query  207  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  266
            RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI
Sbjct  123  RMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDI  182

Query  267  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  326
            CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY
Sbjct  183  CGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDY  242

Query  327  LEACRESYAPPYTIGKNKFIP  347
            LEACRESYAPPYTIGKNKFIP
Sbjct  243  LEACRESYAPPYTIGKNKFIP  263

10) SFxv_2282 in NC_017328


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  395 bits (1486),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVL  60
            MRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIGAYHQGRELTRHAVL
Sbjct  15   MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVL  74

Query  61   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  120
            LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS
Sbjct  75   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  134

Query  121  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  180
            IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA
Sbjct  135  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  194

Query  181  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  240
            LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY
Sbjct  195  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  254

Query  241  TIGKNKFIP  249
            TIGKNKFIP
Sbjct  255  TIGKNKFIP  263

11) S2152 in NC_004741


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  395 bits (1486),  Expect = 9e-112, Method: Compositional matrix adjust.
 Identities = 248/249 (99%), Positives = 248/249 (99%), Gaps = 0/249 (0%)

Query  1    MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVL  60
            MRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIGAYHQGRELTRHAVL
Sbjct  15   MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVL  74

Query  61   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  120
            LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS
Sbjct  75   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  134

Query  121  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  180
            IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA
Sbjct  135  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  194

Query  181  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  240
            LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY
Sbjct  195  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  254

Query  241  TIGKNKFIP  249
            TIGKNKFIP
Sbjct  255  TIGKNKFIP  263

12) SFV_2047 in NC_008258


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  388 bits (1458),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 246/249 (99%), Positives = 246/249 (99%), Gaps = 0/249 (0%)

Query  1    MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIGAYHQGRELTRHAVL  60
            MRHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIGAYHQGRELTRHAVL
Sbjct  15   MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVL  74

Query  61   LMLHVFIRSSELRFARCSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  120
            LMLHVFIRSSELRFAR SEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS
Sbjct  75   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  134

Query  121  IVILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  180
            I ILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA
Sbjct  135  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  194

Query  181  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  240
            LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY
Sbjct  195  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  254

Query  241  TIGKNKFIP  249
            TIGKNKFIP
Sbjct  255  TIGKNKFIP  263

13) APECO1_1051 in NC_008563


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  366 bits (1376),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 233/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  320
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

14) intA_2 in NC_022370


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  366 bits (1376),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 233/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  320
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

15) UM146_07320 in NC_017632


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  366 bits (1376),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 233/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  320
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

16) UTI89_C2177 in NC_007946


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  366 bits (1376),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 233/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)

Query  85   LEVASRTRQHLSNIIRHAVHQELIDTNPAANLGGVTTPPVRRHYPAlplerlpellerIG  144
            LEVASRTRQHLSNI+RHAVHQELIDTNPAANLGGVTTPPVRRHYPA PLERLPELLERIG
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  145  AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVHYSGRGA  204
            AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGV+YSGRGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  205  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  264
            KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  265  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  320
            DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

17) A225_3768 in NC_018106


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  311 bits (1166),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 175/246 (72%), Positives = 219/246 (90%), Gaps = 0/246 (0%)

Query  1    MRHAVHQGMIENNPASNLEGIIAASVKRHYPAlplerlpellnrIDGYRQGRELTRLAVS  60
            MRHAVHQ +I+ NPA+NL G+ +++V+RHYPA PLERLPELL+RI++Y+QGRELTR AV 
Sbjct  15   MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVL  74

Query  61   HTLHVFIRSSELRFARWTEISFKNKIWTIPTTRESIPGVRYSDRGTKMRTPHIVPLSHQT  120
              LHVFIRSSELRFARW+EI F N++WTIP+TRE+I GVRYS+RG+KMR PHIVPLS+Q+
Sbjct  75   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  134

Query  121  IGILKQIREISGDQALLFPSISKPSRPMSENTVNKALRLMEYNTKEDVCGHGFRAMACSA  180
            I+ILKQI++I+G++ L+FP+  +P +PM ENTVNKALR+M Y+TK D+CGHGFRAMACSA
Sbjct  135  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  194

Query  181  LIESGLWSQDVVERQMSHQERNSVRAAYIHKAEHLEARKAMMQWWSDYLDRCREEFVPSY  240
            L+ESGLW++D VERQMSHQERN+VR AYIHKAEHLEARKAMMQWWSDYL+ CRE + P+Y
Sbjct  195  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  254

Query  241  ILGHQQ  246
             +G ++
Sbjct  255  TIGKNK  260

18) W5S_0472 in NC_017845


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  293 bits (1099),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 163/258 (64%), Positives = 209/258 (82%), Gaps = 1/258 (0%)

Query  103  LEVASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALELKHTPKLLQRID  162
            LEVASR +Q+ + IMR AV+  LID NPA +++G  +++ R+H PA  L + P LL+RI+
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  163  NY-TGRPLTRLAAELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPIEGVKHSHRGS  221
             Y  GR LTR A  L L +FIRSSELRFARWSEIDF   +WTIP+ REPI GV+ S RG+
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  222  KMRTPHLVPLSRQALVILKQIQQFSGDHELIFIGDHDPRKPMSENTVNKALRVMGYDTKV  281
            KMR PH+VPLS Q++ ILKQI++++G++ELIF GDH+P KPM ENTVNKALRVMGYDTK 
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  282  EVCGHGFRTMACSSLIESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWA  341
            ++CGHGFR+MACS+L+ESGLW++DAVERQMSH ERN+VR AYIHKAEHL+ RK M+QWW+
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  342  DFLDANREKAVSAFDFGK  359
            D+L+A RE   +++ +GK
Sbjct  241  DYLEACRESYAPPYTIGK  258

19) KPN2242_20085 in NC_017540


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  282 bits (1055),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 158/236 (67%), Positives = 196/236 (84%), Gaps = 1/236 (0%)

Query  53   LETAARLQQRITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFE  112
            LE A+R +Q+++ IMR AV++ LI +NPA +L G  +PP + HYPA PLE++PELLE + 
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  113  SY-SGRLLTRLAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGA  171
            +Y  GR LTR AV L L +FI+SSELRFARW+EID+   +WTIPA REPI GVRYS RGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  172  KMKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKV  231
            KM+ PH+VPLS Q++++LKQ+K ++GN+EL+FPGDH+P KPM ENT+NKALRVMGYDTK 
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  232  DVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            D+CGHGFR+MACSAL+ESG W+KDAVERQMSHQERN VR AYIHKAEHL+ R  MM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

20) int in NC_009648


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  280 bits (1049),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 157/236 (67%), Positives = 196/236 (84%), Gaps = 1/236 (0%)

Query  53   LETAARLQQRITAIMRYAVQESLIASNPANDLTGAIAPPPKNHYPALPLEKMPELLECFE  112
            LE A+R +Q+++ IMR AV++ LI +NPA +L G  +PP + HYPA PLE++PELLE + 
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  113  SY-SGRLLTRLAVQLNLLIFIHSSELRFARWTEIDLDGAMWTIPAEREPIPGVRYSERGA  171
            +Y  GR LTR AV L L +FI+SSELRFARW+EID+   +WTIPA REPI GVRYS RGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  172  KVKTPHLVPLSKQAVTVLKQLKLLSGNSELLFPGDHDPRKPMSENTINKALRVMGYDTKV  231
            K++ PH+VPLS Q++++LKQ+K ++GN+EL+FPGDH+P KPM ENT+NKALRVMGYDTK 
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  232  DVCGHGFRTMACSALIESGRWSKDAVERQMSHQERNNVRAAYIHKAEHLDERTQMM  287
            D+CGHGFR+MACSAL+ESG W+KDAVERQMSHQERN VR AYIHKAEHL+ R  MM
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM  236

21) S70_12490 in NC_017731


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  274 bits (1025),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 164/258 (64%), Positives = 207/258 (81%), Gaps = 1/258 (0%)

Query  5    LLVAARLQQRVTGIMRYAVQSGLIDYNPAQDMAGAVATGKRVHRAALELKRLPEFLQRID  64
            L VA+R +Q+++ IMR AV+  LID NPA +++G  +   R H +A  L RLPE+L+RI+
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  65   DY-KGRPltklaakltllVFIRSSELRFARWDEIDFENAMWTIPAEREAIEGVKHSHRGS  123
             Y +GR LT+ A  L L VFIRSSELRFARW EIDF N +WTIPA RE+I GV+ S RG+
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  124  KMRTPHLVPLSRQAIEILKQIYQFSGIHELIFIGDHNPRKPMSENTVNNALRVMGYDTMT  183
            KMR PH+VPLS Q+I ILKQI +++G +ELIF GDHNP KPM ENTVN+ALRVMGYDT  
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  184  EVCGHGFRTMACSSLIESGLWSKDAVERQMSHQERNSVRAAYIHKAEHIEERRLMVQWWA  243
            ++CGHGFR+MACS+L+ESGLW+KDAVERQMSHQERN+VR AYIHKAEH+E R+ M+QWW+
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  244  DYLDANREQTISPFDFAK  261
            DYL+A RE   +P+ ++K
Sbjct  241  DYLEACRESYAPPYTIGK  258

22) KPR_0664 in NC_021232


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  266 bits (994),  Expect = 9e-73, Method: Compositional matrix adjust.
 Identities = 158/255 (62%), Positives = 205/255 (81%), Gaps = 1/255 (0%)

Query  20   EVASRLQQRTTAILRFAVQNGLLEYNPAQDMAGAIAVAKRVHRPALDFERFSELLDRIEC  79
            EVASR +Q+ + I+R AV++ L++ NPA +++G  + + R H PA  +ER++ELL+RI  
Sbjct  2    EVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGA  61

Query  80   F-KGRkltklavkltllvFIRSSELRFARWEEIDFKNALWTIPAEREPMKGVKHSHRGSK  138
            + +GR LT+ AV L L VFIRSSELRFARW EIDF N +WTIPA REP+ GV+ S RG+K
Sbjct  62   YHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAK  121

Query  139  MRSPHLVPLSRQALEVLKDIKQISGDYELVFIGDHQPDRPMSENTVNKALRSMGYDTKTE  198
            MR PH+VPLS Q++ +LK+IK+I+G+ EL+F GDH+P +PM ENTVNKALR MGYDTK +
Sbjct  122  MRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKD  181

Query  199  VCGHGFRSMACSALIESGLWSKDAVERQMSHQERNNVRAAYIHLAEHLDERRLMLQWWAD  258
            +CGHGFR+MACSAL+ESGLW+KDAVERQMSHQERN VR AYIH AEHL+ R+ M+QWW+D
Sbjct  182  ICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSD  241

Query  259  YLDANRKGILRPYDF  273
            YL+A R +   PY +
Sbjct  242  YLEACRESYAPPYTI  256

23) PSF113_0326 in NC_016830


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 151/260 (59%), Positives = 198/260 (77%), Gaps = 2/260 (0%)

Query  87   IDVALRVQNYLQSIMREAKRLRLITANPAYDLEGLIKAPRVVHRPALPLSRLPELQERID  146
            ++VA R ++ L +IMR+A +  LI +NPA +L G+  +P   H PA PL RLPEL ERI+
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  147  TY-KGRALTRLTVMLSLHVFVRSSELRFARWSEFDLKRGTWEIPDTRPALEGVPFSTRGT  205
            +Y +GR LTR +V+L LHVF+RSSELRFARWSE+D+    W IP TR ++ GV +S RG+
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  206  KMAGDIHLVPLSPQAVALLEQIHALTGKFDLVFAGDAKPWKPMSENTVNNALRTMGYDTK  265
            KM    H+VPLS Q++A+L QI  +TG+ +L+F+GD +P KPM ENTVN+ALR MGYDTK
Sbjct  121  KMRMP-HIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTK  179

Query  266  TDICGHGFRSMACSALIESGLWSETAIERQMSHKERNNVRAAYIHKAEFIEERRLIMNWW  325
             DICGHGFR+MACSAL+ESGLW+  A+ERQMSH+ERN VR AYIHKAE +E R+ +M+WW
Sbjct  180  KDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWW  239

Query  326  SRYLEANREEHVTPHEFANQ  345
            S YLEA RE    P  ++++
Sbjct  240  SDYLEACRESYAPPYTIGKN  259

24) O3O_02410 in NC_018661


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  250 bits (934),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 154/244 (64%), Positives = 196/244 (81%), Gaps = 1/244 (0%)

Query  1    MRYAVQSGIIRYNPALDMAGALTTVKRQHrpalelsrlpellsRIDGY-KGQPVTRLAVM  59
            MR AV+  +I  NPA +++G  T   R+H PA  L RLPELL RI++Y +G+ +TR AV+
Sbjct  15   MRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVL  74

Query  60   LNLLVFIRSSELRYARWSEIDIDNSMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQV  119
            L L VFIRSSELR+ARWSEID+ N +WTIPA REP+ GV++S RG+KMR PH+VPLS Q 
Sbjct  75   LMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQS  134

Query  120  VAILAELQTWAGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSA  179
            +AIL +++  +G+N LIF G H+P KP+ ENTVNKALRVMGYDT +++CGHGFRAMACSA
Sbjct  135  IAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSA  194

Query  180  LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREKGISPF  239
            L+ESGLW++DAVERQMSHQERN VR AYIHKAEHLE R+ M+QWW+D+L+A RE   +P+
Sbjct  195  LMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWSDYLEACRESYAPPY  254

Query  240  EYAK  243
              +K
Sbjct  255  TIGK  258

25) AMEC673_10230 in NC_018678


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  163 bits (604),  Expect = 5e-42, Method: Compositional matrix adjust.
 Identities = 105/248 (43%), Positives = 159/248 (65%), Gaps = 18/248 (7%)

Query  39   LDVAQRVLQDIGRVCRYAVQIERINFNPASELSDVLKSRKVEHRASLPREQLPAFVKALS  98
            L+VA R  Q+++ + R AV+ E I+ NPA++L++V  +    H ++ P E+LP ++  ++
Sbjct  1    LEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIG  60

Query  99   TYEEKGRLLTKYAIQLLVLTFVRPGELRGARWEEFNFEENIWRIPAER------------  146
            +Y++ GR LT+ A+ L++  F+R++ELR ARW E++F + +W IPA R            
Sbjct  61   AYHQ-GRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRG  119

Query  147  MKMRSEHIVPLSKQAIEVIDRIRSITHQYSLLFPSERDRNEPMSDNTMRRAIFKMGYDGT  206
             KMR  HIVPLS Q+I ++ +I+ IT +  L+FP++++   PM +NT+ +A+  MGYD  
Sbjct  120  AKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTK  179

Query  207  KPGKAKANPHGFRATASSILNEQGF-NPDAIERQLSHMERNGVRAAYTHHARYLDERKNM  265
            K        HGFRA A S L E G+   DA+ERQ+SH ERN VR AY H A  L+ RK M
Sbjct  180  K----DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAM  235

Query  266  MQWWADYV  273
            MQWW+DY+
Sbjct  236  MQWWSDYL  243

26) A1S_2908 in NC_009085


> FJ212134|1|G1|237847301|ACR23141.1|Escherichia_coli_ECOR57|+|1..792|int|-|P4-like 
integrase
Length=263

 Score =  149 bits (548),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 118/260 (46%), Positives = 174/260 (67%), Gaps = 4/260 (1%)

Query  88   DNAQRIRASLIQVYSYAVQHSYIQTNIARDLEDMDLSARKNHRATFRSLDLIPQLIRRIK  147
            + A R R  L ++   AV++  I+TN A +L ++  ++ + H ++  +L+ +P+L+ RI 
Sbjct  2    EVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPA-PPLERLPELLERIG  60

Query  148  A-DSGNPltklclllglhtflRSSEIRFARWNEIDFEAEIWRIPPRRRLIEGVKHSDRGA  206
            A + G  LT+  +LL LH F+RSSE+RFARW+EIDF   +W IP+ R  I GV+ S+RGA
Sbjct  61   AYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGA  120

Query  207  KMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFPSLNNKRIFISENTPNDALRRMGY-TKE  265
            KM+  H+VPLS QSI IL ++ + +G+ +++FP+ +N    + ENT N ALR MGY TK 
Sbjct  121  KMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTKK  180

Query  266  EISFHGFRALARSALGEMSIFSRDALEKQMSHQERNETVGAYTHIAEYLEEREKIMQIWS  325
            +I  HGFRA+A SAL E ++ ++DA+E+QMSHQERN    AY H AE LE R  +MQ WS
Sbjct  181  DICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS  240

Query  326  DWLSAIENGDYISPHEYGRH  345
            D L A  ++ Y +P   G++
Sbjct  241  DYLEACRES-YAPPYTIGKN  259