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Homologs of traD gene of AY803022

129

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NGK_1090
( YP_002001715.1 )

protein TraD

NC_011035
(Neisseria gonorrhoeae NCCP11945)

0.0

2) Dsui_2572
( YP_005028764.1 )

conjugative coupling factor TraD, TOL family

NC_016616
(Dechlorosoma suillum PS)

5e-175

3) UMN179_00355
( YP_004419289.1 )

type IV secretion-system coupling protein DNA-binding domain-containing protein

NC_015460
(Gallibacterium anatis UMN179)

9e-152

4) Spro_4096
( YP_001480319.1 )

putative plasmid transfer protein

NC_009832
(Serratia proteamaculans 568)

8e-149

5) Q7C_1531
( YP_006293367.1 )

type IV secretory pathway, VirD4 components

NC_017856
(Methylophaga sp. JAM7)

6e-148

6) Noc_0632
( YP_342681.1 )

hypothetical protein

NC_007484
(Nitrosococcus oceani ATCC 19707)

8e-147

7) SPAB_05375
( YP_001591481.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-146

8) Metme_2014
( YP_004512923.1 )

conjugative coupling factor TraD

NC_015572
(Methylomonas methanica MC09)

2e-145

9) ECL_00434
( YP_003610949.1 )

TraG-family protein

NC_014121
(Enterobacter cloacae ATCC 13047)

5e-145

10) MEALZ_2094
( YP_004917372.1 )

ATPase domain

NC_016112
(Methylomicrobium alcaliphilum 20Z)

5e-145

11) YE3493
( YP_001007651.1 )

TraG-family protein

NC_008800
(Yersinia enterocolitica 8081)

2e-142

12) YpsIP31758_3718
( YP_001402672.1 )

hypothetical protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

1e-141

13) PMI2588
( YP_002152307.1 )

plasmid transfer protein

NC_010554
(Proteus mirabilis HI4320)

2e-141

14) Spro_0326
( YP_001476564.1 )

putative plasmid transfer protein

NC_009832
(Serratia proteamaculans 568)

4e-141

15) STY4562
( NP_458648.1 )

hypothetical protein

NC_003198
(Salmonella enterica CT18)

4e-141

16) STBHUCCB_45100
( YP_005219930.1 )

VirD4, Type IV secretory pathway, VirD4 component

NC_016832
(Salmonella enterica P-stx-12)

4e-141

17) SPC_4418
( YP_002639912.1 )

hypothetical protein

NC_012125
(Salmonella enterica RKS4594)

4e-141

18) t4260
( NP_807858.1 )

hypothetical protein

NC_004631
(Salmonella enterica Ty2)

4e-141

19) LF82_676
( YP_002559014.1 )

hypothetical protein

NC_011993
(Escherichia coli LF82)

5e-141

20) NRG857_20850
( YP_006122512.1 )

TraG-family protein

NC_017634
(Escherichia coli NRG 857C)

5e-141

21) Spro_4179
( YP_001480401.1 )

putative plasmid transfer protein

NC_009832
(Serratia proteamaculans 568)

7e-141

22) SerAS9_0283
( YP_004503706.1 )

conjugative coupling factor TraD

NC_015567
(Serratia plymuthica AS9)

9e-141

23) SerAS12_0283
( YP_004498754.1 )

conjugal transfer protein TraD

NC_015566
(Serratia sp. AS12)

9e-141

24) SerAS13_0282
( YP_006023169.1 )

conjugal transfer protein TraD

NC_017573
(Serratia sp. AS13)

9e-141

25) TY21A_21685
( YP_007928497.1 )

hypothetical protein

NC_021176
(Salmonella enterica Ty21a)

1e-140

26) CFSAN002050_22335
( YP_008262334.1 )

conjugal transfer protein TraG

NC_021818
(Salmonella enterica CFSAN002050)

7e-140

27) ECED1_3574
( YP_002399433.1 )

putative plasmid transfer protein

NC_011745
(Escherichia coli ED1a)

1e-139

28) EJP617_06600
( YP_005817228.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

9e-140

29) YPZ3_0310
( YP_003566482.1 )

hypothetical protein

NC_014029
(Yersinia pestis Z176003)

2e-139

30) F382_13535
( YP_008235505.1 )

conjugal transfer protein TraG

NC_021743
(Mannheimia haemolytica D153)

2e-139

31) D650_16560
( YP_007666433.1 )

VirD4, Type IV secretory pathway, VirD4 component

NC_020833
(Mannheimia haemolytica USDA-ARS-USMARC-183)

2e-139

32) N220_08340
( YP_008339112.1 )

conjugal transfer protein TraG

NC_021883
(Mannheimia haemolytica USMARC_2286)

2e-139

33) D648_11000
( YP_007668612.1 )

VirD4, Type IV secretory pathway, VirD4 component

NC_020834
(Mannheimia haemolytica USDA-ARS-USMARC-185)

3e-139

34) HIB_01000
( YP_005178135.1 )

hypothetical protein

NC_016809
(Haemophilus influenzae 10810)

7e-139

35) NTHI0125
( YP_247771.1 )

hypothetical protein

NC_007146
(Haemophilus influenzae 86-028NP)

7e-139

36) R2866_0592
( YP_005827287.1 )

conserved hypothetical protein p35

NC_017451
(Haemophilus influenzae R2866)

7e-139

37) PARA_11950
( YP_004822889.1 )

hypothetical protein

NC_015964
(Haemophilus parainfluenzae T3T1)

1e-138

38) HSM_1710
( YP_001785030.1 )

hypothetical protein

NC_010519
(Haemophilus somnus 2336)

3e-138

39) B5T_02126
( YP_006820743.1 )

traG-like protein

NC_018691
(Alcanivorax dieselolei B5)

3e-138

40) Pecwa_0645
( YP_003258076.1 )

TraG-family protein

NC_013421
(Pectobacterium wasabiae WPP163)

4e-138

41) MHH_c22940
( YP_007884091.1 )

conjugative coupling factor TraD, SXT/TOL subfamily

NC_021082
(Mannheimia haemolytica M42548)

1e-137

42) Pmu_03190
( YP_005176218.1 )

conjugal transfer protein TraD

NC_016808
(Pasteurella multocida 36950)

1e-137

43) XNC1_3666
( YP_003713796.1 )

plasmid transfer protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-137

44) XBJ1_1536
( YP_003467443.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-137

45) XBJ1_3387
( YP_003469269.1 )

plasmid transfer protein

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-137

46) virD4
( YP_005208724.1 )

protein VirD4

NC_016830
(Pseudomonas fluorescens F113)

4e-137

47) UMNK88_5027
( YP_006136667.1 )

hypothetical protein

NC_017641
(Escherichia coli UMNK88)

1e-136

48) Ser39006_1496
( YP_008521878.1 )

conjugative coupling factor TraD, PFGI-1 class

NC_022268
(Serratia sp. ATCC 39006)

1e-136

49) NT01EI_0336
( YP_002931813.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

8e-136

50) PPS_2354
( YP_004701795.1 )

hypothetical protein

NC_015733
(Pseudomonas putida S16)

9e-136

51) NCGM2_1821
( YP_005980066.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

5e-135

52) Dd1591_0448
( YP_003002814.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

1e-134

53) YSA_00771
( YP_006384312.1 )

hypothetical protein

NC_017986
(Pseudomonas putida ND6)

5e-135

54) Bpet1349
( YP_001629954.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

6e-135

55) HELO_4050
( YP_003899119.1 )

hypothetical protein

NC_014532
(Halomonas elongata DSM 2581)

6e-135

56) L483_11910
( YP_008094168.1 )

conjugal transfer protein TraG

NC_021491
(Pseudomonas putida H8234)

7e-135

57) L483_22155
( YP_008096197.1 )

conjugal transfer protein TraG

NC_021491
(Pseudomonas putida H8234)

7e-135

58) PANA5342_3991
( YP_005197421.1 )

TraG-family protein

NC_016816
(Pantoea ananatis LMG 5342)

1e-134

59) PAGR_g3858
( YP_005994566.1 )

TraG-family plasmid transfer protein

NC_017554
(Pantoea ananatis PA13)

1e-134

60) SARI_03109
( YP_001572091.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-134

61) PSPA7_4501
( YP_001349851.1 )

TraG/TraD family protein

NC_009656
(Pseudomonas aeruginosa PA7)

2e-134

62) PputW619_3305
( YP_001750159.1 )

hypothetical protein

NC_010501
(Pseudomonas putida W619)

3e-134

63) G655_23660
( YP_007711568.1 )

TraG/TraD family protein

NC_020912
(Pseudomonas aeruginosa B136-33)

3e-134

64) T1E_4216
( YP_006534839.1 )

hypothetical protein

NC_018220
(Pseudomonas putida DOT-T1E)

4e-134

65) Pput_2934
( YP_001268246.1 )

hypothetical protein

NC_009512
(Pseudomonas putida F1)

4e-134

66) Alide2_1783
( YP_004387685.1 )

conjugative coupling factor TraD

NC_015422
(Alicycliphilus denitrificans K601)

5e-134

67) Pfl01_3012
( YP_348741.1 )

hypothetical protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

6e-134

68) PA14_59690
( YP_792959.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

8e-134

69) DSC_04130
( YP_004929520.1 )

hypothetical protein

NC_016147
(Pseudoxanthomonas spadix BD-a59)

1e-133

70) HS_1751
( YP_719956.1 )

hypothetical protein

NC_008309
(Haemophilus somnus 129PT)

1e-133

71) EbC_pEb10200610
( YP_003739118.1 )

plasmid transfer protein

NC_014304
(Erwinia billingiae Eb661)

8e-134

72) ECA0560
( YP_048676.1 )

plasmid transfer protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-133

73) PADK2_23970
( YP_006484759.1 )

TraG/TraD family protein

NC_018080
(Pseudomonas aeruginosa DK2)

2e-133

74) XNC1_3548
( YP_003713689.1 )

plasmid transfer protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-133

75) PSTAB_1202
( YP_004713572.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

7e-133

76) Mpe_A2380
( YP_001021570.1 )

hypothetical protein

NC_008825
(Methylibium petroleiphilum PM1)

2e-132

77) Maqu_3937
( YP_957131.1 )

hypothetical protein

NC_008739
(Marinobacter aquaeolei VT8)

5e-132

78) M062_05005
( YP_008131450.1 )

conjugal transfer protein TraG

NC_021577
(Pseudomonas aeruginosa RP73)

8e-132

79) Plav_3414
( YP_001414674.1 )

hypothetical protein

NC_009719
(Parvibaculum lavamentivorans DS-1)

4e-131

80) HEAR2005
( YP_001100272.1 )

hypothetical protein

NC_009138
(Herminiimonas arsenicoxydans )

1e-130

81) PFLU1961
( YP_002871589.1 )

putative traG-like protein

NC_012660
(Pseudomonas fluorescens SBW25)

8e-131

82) Aave_0527
( YP_968906.1 )

hypothetical protein

NC_008752
(Acidovorax citrulli AAC00-1)

2e-130

83) traD
( YP_261779.1 )

conjugative coupling factor TraD

NC_004129
(Pseudomonas protegens Pf-5)

2e-130

84) NH44784_010561
( YP_008028156.1 )

Type IV secretory pathway, VirD4 components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-130

85) BN117_0540
( YP_006894589.1 )

membrane protein

NC_018828
(Bordetella parapertussis Bpp5)

8e-129

86) Tgr7_2845
( YP_002514905.1 )

hypothetical protein

NC_011901
(Thioalkalivibrio sulfidophilus HL-EbGR7)

1e-128

87) PSEBR_a2001
( YP_004353241.1 )

hypothetical protein

NC_015379
(Pseudomonas brassicacearum NFM421)

2e-128

88) Pecwa_1638
( YP_003259035.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

3e-128

89) KPHS_45130
( YP_005228813.1 )

TraG-family protein

NC_016845
(Klebsiella pneumoniae HS11286)

3e-128

90) N559_0794
( YP_008423865.1 )

hypothetical protein

NC_022082
(Klebsiella pneumoniae JM45)

3e-128

91) ST548_p5031
( YP_007389567.1 )

Type IV secretory pathway, VirD4 components

NC_020181
(Enterobacter aerogenes EA1509E)

5e-128

92) ebA2421
( YP_158384.1 )

hypothetical protein

NC_006513
(Aromatoleum aromaticum EbN1)

1e-127

93) NH44784_008611
( YP_008027963.1 )

Type IV secretory pathway, VirD4 components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

1e-127

94) Alide2_1911
( YP_004387805.1 )

conjugative coupling factor TraD

NC_015422
(Alicycliphilus denitrificans K601)

1e-127

95) A464_4524
( YP_008325116.1 )

Type IV secretory pathway VirD4 component

NC_021870
(Salmonella bongori N268-08)

7e-128

96) ambt_20940
( YP_004469481.1 )

hypothetical protein

NC_015554
(Alteromonas sp. SN2)

2e-127

97) Psyr_1454
( YP_234542.1 )

hypothetical protein

NC_007005
(Pseudomonas syringae B728a)

3e-127

98) XAC29_11435
( YP_007636705.1 )

hypothetical protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

1e-126

99) W5S_1505
( YP_006282471.1 )

Conjugative coupling factor TraD

NC_017845
(Pectobacterium sp. SCC3193)

8e-127

100) Tmz1t_0963
( YP_002354625.1 )

hypothetical protein

NC_011662
(Thauera sp. MZ1T)

2e-126

101) A79E_4468
( YP_006638228.1 )

type IV secretory pathway, VirD4 component

NC_018522
(Klebsiella pneumoniae 1084)

3e-126

102) KP1_0626
( YP_002917549.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

3e-126

103) xccb100_2442
( YP_001903847.1 )

hypothetical protein

NC_010688
(Xanthomonas campestris B100)

9e-126

104) Ajs_2208
( YP_986449.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

9e-126

105) XCAW_01678
( YP_007649673.1 )

Hypothetical Protein

NC_020815
(Xanthomonas citri Aw12879)

2e-125

106) AXYL_01096
( YP_003977155.1 )

hypothetical protein

NC_014640
(Achromobacter xylosoxidans A8)

2e-125

107) A458_06265
( YP_006456922.1 )

conjugative coupling factor TraD

NC_018028
(Pseudomonas stutzeri CCUG 29243)

2e-125

108) Neut_0098
( YP_746351.1 )

hypothetical protein

NC_008344
(Nitrosomonas eutropha C91)

2e-125

109) virD4
( YP_584482.1 )

VirD4, type IV secretory pathway, VirD4 components

NC_007973
(Cupriavidus metallidurans CH34)

7e-125

110) PLES_26671
( YP_002440260.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

7e-125

111) Bpet1483
( YP_001630088.1 )

plasmid-transfer-protein

NC_010170
(Bordetella petrii DSM 12804)

7e-125

112) NH44784_009641
( YP_008028065.1 )

Type IV secretory pathway, VirD4 components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-125

113) PADK2_12060
( YP_006482397.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

9e-125

114) SMD_1535
( YP_006184267.1 )

type IV secretory pathway, VirD4 components

NC_017671
(Stenotrophomonas maltophilia D457)

9e-125

115) TMO_c0054
( YP_006373646.1 )

hypothetical protein

NC_017958
(Tistrella mobilis KA081020-065)

9e-125

116) NCGM2_1421
( YP_005979672.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-124

117) Alide_4017
( YP_004128610.1 )

hypothetical protein

NC_014910
(Alicycliphilus denitrificans BC)

3e-124

118) XCV2377
( YP_364108.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

4e-124

119) XC_2040
( YP_243121.1 )

VirD4, Type IV secretory pathway, VirD4 components

NC_007086
(Xanthomonas campestris 8004)

6e-124

120) Daci_4169
( YP_001565185.1 )

hypothetical protein

NC_010002
(Delftia acidovorans SPH-1)

1e-123

121) PSTAA_1259
( YP_005937911.1 )

hypothetical protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

1e-123

122) Tola_2433
( YP_002893614.1 )

hypothetical protein

NC_012691
(Tolumonas auensis DSM 9187)

8e-124

123) Bpet1071
( YP_001629674.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

8e-124

124) Ajs_1408
( YP_985699.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

1e-123

125) Ajs_1274
( YP_985574.1 )

hypothetical protein

NC_008782
(Acidovorax sp. JS42)

2e-123

126) HDN1F_18170
( YP_003811047.1 )

hypothetical protein

NC_014366
(gamma proteobacterium HdN1)

1e-115

127) HDN1F_35020
( YP_003812715.1 )

hypothetical protein

NC_014366
(gamma proteobacterium HdN1)

1e-115

128) ebA403
( YP_157232.1 )

hypothetical protein

NC_006513
(Aromatoleum aromaticum EbN1)

8e-106

129) Sbal117_4734
( YP_006039735.1 )

conjugal transfer protein TraD

NC_017580
(Shewanella baltica OS117)

8e-95