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Homologs of insA gene of AY560916

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ECP_0347
( YP_668280.1 )

insertion element IS1 1/2/3/5/6 protein InsA

NC_008253
(Escherichia coli 536)

1e-24

100

2) LF82_045
( YP_002555230.1 )

Insertion element IS1 1/2/3/5/6 protein insA

NC_011993
(Escherichia coli LF82)

1e-24

100

3) NRG857_01340
( YP_006118632.1 )

insertion element IS1 1/2/3/5/6 protein InsA

NC_017634
(Escherichia coli NRG 857C)

1e-24

100

4) ECABU_c03700
( YP_006104504.1 )

putative insertion element

NC_017631
(Escherichia coli ABU 83972)

2e-24

100

5) c0396
( NP_752333.1 )

insertion element IS1 1/2/3/5/6 protein insA

NC_004431
(Escherichia coli CFT073)

2e-24

100

6) i14_0375
( YP_006152512.1 )

insertion element IS1 1/2/3/5/6 protein insA

NC_017652
(Escherichia coli clone D i14)

2e-24

100

7) i02_0375
( YP_006147593.1 )

insertion element IS1 1/2/3/5/6 protein insA

NC_017651
(Escherichia coli clone D i2)

2e-24

100

8) ECOPMV1_00280
( YP_008570215.1 )

Transposase

NC_022370
(Escherichia coli PMV-1)

6e-24

100

9) ECS88_0281
( YP_002390115.1 )

transposase InsA (ORF1) IS1

NC_011742
(Escherichia coli S88)

6e-24

100

10) UM146_15925
( YP_006112056.1 )

transposase InsA (ORF1) IS1

NC_017632
(Escherichia coli UM146)

6e-24

100

11) insA
( YP_539331.1 )

InsA protein

NC_007946
(Escherichia coli UTI89)

6e-24

100

12) Dd1591_3685
( YP_003005972.1 )

Insertion element protein

NC_012912
(Dickeya zeae Ech1591)

3e-09

13) XBJ1_1427
( YP_003467345.1 )

insertion element iso-IS1N protein insA (fragment)

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-06

14) XBJ1_1984
( YP_003467883.1 )

insertion element iso-IS1N protein insA (fragment)

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-06

15) O3M_22150
( YP_006772044.1 )

hypothetical protein

NC_018650
(Escherichia coli 2009EL-2050)

1e-06

• Sequence Alignments

1) ECP_0347 in NC_008253


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

2) LF82_045 in NC_011993


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

3) NRG857_01340 in NC_017634


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

4) ECABU_c03700 in NC_017631


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

5) c0396 in NC_004431


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

6) i14_0375 in NC_017652


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

7) i02_0375 in NC_017651


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

Query  71  H  71
           H
Sbjct  61  H  61

8) ECOPMV1_00280 in NC_022370


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

9) ECS88_0281 in NC_011742


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

10) UM146_15925 in NC_017632


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

11) insA in NC_007946


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)

Query  11  CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  70
           CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPE  60

12) Dd1591_3685 in NC_012912


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 29/49 (60%), Positives = 37/49 (76%), Gaps = 0/49 (0%)

Query  11  CQSAQVYRHGQNPKGRDRFLCRDCHRVFLLTYAYEACKPDVKEQITEMA  59
           C+S +VYRHG++   ++RF CR C RVF LTY+YEA KP+ KE I EMA
Sbjct  1   CNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMA  49

13) XBJ1_1427 in NC_013892


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 40/54 (75%), Gaps = 0/54 (0%)

Query  13  KSEQVKGHGKGNGGHPRYRCYSCCKVFQLAYTYQACKPGVKEQIVDIAMNKRGN  66
           +S++V  HG++ + H R+RC SC +VFQL+Y+Y+A KPG KE IV++A N  G 
Sbjct  2   NSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGA  55

14) XBJ1_1984 in NC_013892


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score = 46.3 bits (156),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 40/54 (75%), Gaps = 0/54 (0%)

Query  13  KSEQVKGHGKGNGGHPRYRCYSCCKVFQLAYTYQACKPGVKEQIVDIAMNKRGN  66
           +S++V  HG++ + H R+RC SC +VFQL+Y+Y+A KPG KE IV++A N  G 
Sbjct  2   NSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGA  55

15) O3M_22150 in NC_018650


> AY560916|1|G1|49036013|AAT48707.1|Escherichia_coli_4787|+|1..187|insA|-|truncated 
InsA protein
Length=61

 Score = 45.8 bits (154),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 19/47 (41%), Positives = 32/47 (69%), Gaps = 0/47 (0%)

Query  3   RNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVG  49
           R+G+S + H+R+ C  C++  QL ++Y A +PG  + I++MA NG G
Sbjct  8   RHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTG  54