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Homologs of hp0521 gene of AY430173

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPSJM_02680
( YP_003928449.1 )

cag pathogenicity island protein Epsilon

NC_014560
(Helicobacter pylori SJM180)

1e-40

2) HPSNT_02685
( YP_005786677.1 )

cag pathogenicity island protein Epsilon

NC_017376
(Helicobacter pylori Santal49)

5e-32

3) cag2
( YP_002301162.1 )

cag pathogenicity island protein Epsilon

NC_011498
(Helicobacter pylori P12)

9e-32

4) HPIN_04295
( YP_005782168.1 )

cag pathogenicity island protein Epsilon

NC_017372
(Helicobacter pylori India7)

1e-30

5) K750_04175
( YP_007982191.1 )

cag pathogenicity island protein

NC_021217
(Helicobacter pylori UM037)

3e-30

6) HPPN135_02550
( YP_005789727.1 )

cag pathogenicity island protein Epsilon

NC_017379
(Helicobacter pylori Puno135)

9e-29

7) HPG27_480
( YP_002266109.1 )

hypothetical protein

NC_011333
(Helicobacter pylori G27)

6e-24

8) HPLT_02580
( YP_005772660.1 )

hypothetical protein

NC_017362
(Helicobacter pylori Lithuania75)

5e-23

• Sequence Alignments

1) HPSJM_02680 in NC_014560


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  158 bits (585),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 104/121 (86%), Positives = 111/121 (92%), Gaps = 5/121 (4%)

Query  1    MIQRELNSVSFY-GCSNYVNKGDRKGILREINGSMKMVCLASVKANVKENSFFLGCKKYL  59
            MIQRELNSVSFY GCSNYVNKG+ KG+LREINGSMKMVCLASVKAN+KEN FFL CK+YL
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  60   K----CKWTASVDSQDPKYPKCNGLMKRKKNFKSNEFFTATSLTLNAMEFCLYTNSEKKG  115
            K    CKWTASVDSQDPKY+KCNGLMKRKKNFK+NEFFTA+ LTLNAMEFCLY NSEKKG
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLNAMEFCLYINSEKKG  120

Query  116  N  116
            N
Sbjct  121  N  121

2) HPSNT_02685 in NC_017376


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  130 bits (476),  Expect = 5e-32, Method: Compositional matrix adjust.
 Identities = 101/124 (82%), Positives = 105/124 (85%), Gaps = 8/124 (6%)

Query  1    MIQRELNSVSFY-GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNY-  58
            MIQRELNSVSFY GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKEN FFL CKNY 
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  59   ---LKCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLILNAMEYGILSLYQSEK  115
               LKCKW ASVDSQDPKY+KCNGLMKRKKNFKNNEFFTA+ L LNAME+    LY +  
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLNAMEF---CLYINSE  117

Query  116  KETN  119
            K  N
Sbjct  118  KKGN  121

3) cag2 in NC_011498


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  129 bits (473),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 109/121 (91%), Positives = 112/121 (93%), Gaps = 0/121 (0%)

Query  1    MIQRGLSSVSFYYGCSNYVNKGDCKGVLREINGSMKMVCLASVKANIKENSFFlgcknyl  60
            MIQR L+SVSFYYGCSNYVNKG+CKGVLREINGSMKMVCLASVKANIKEN FFL CKNYL
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  61   kcklkckWTASVDSQDPKYPKCNGLMKRkknfknngffTAVSLILNAREFCLYINSEKKG  120
            K KLKCKWTASVDSQDPKY+KCNGLMKRKKNFKNN FFTA  L LNA EFCLYINSEKKG
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLNAMEFCLYINSEKKG  120

Query  121  N  121
            N
Sbjct  121  N  121

4) HPIN_04295 in NC_017372


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  125 bits (458),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 100/124 (81%), Positives = 104/124 (84%), Gaps = 8/124 (6%)

Query  14   MIQRESNSVSFY-GYSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNY-  71
            MIQRE NSVSFY G SNYVNKGGCKGVLREINGSMKMVCLASVKANIKEN FFL CKNY 
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  72   ---LKCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLTLNAMEYGILSLYQSEK  128
               LKCKW ASVDSQDPKY+KCNGLMKRKKNFKNNEFFTA+ LTLNAME+    LY +  
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLNAMEF---CLYINSE  117

Query  129  KETN  132
            K  N
Sbjct  118  KKGN  121

5) K750_04175 in NC_021217


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  124 bits (453),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 99/124 (80%), Positives = 103/124 (84%), Gaps = 8/124 (6%)

Query  1    MIRRELNSVSFY-GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKKNSFFLGCKNY-  58
            MI+RELNSVSFY GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIK N FFL CKNY 
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  59   ---LKCKWIASVDSQDPKCPKCNGLMKRkknfknneffTAASLTLNAMKYGILSLYQSEK  115
               LKCKW ASVDSQDPK +KCNGLMKRKKNFKNNEFFTAA LTLNAM +    LY +  
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLNAMEF---CLYINSE  117

Query  116  KETN  119
            K  N
Sbjct  118  KKGN  121

6) HPPN135_02550 in NC_017379


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  119 bits (435),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 93/106 (88%), Positives = 97/106 (92%), Gaps = 5/106 (4%)

Query  1    MIQRELNSVSFY-GCSNYVNKGDCKGVLREINGSMKMVCLASVKANIKENSFFLWCKNY-  58
            MIQRELNSVSFY GCSNYVNKG+CKGVLREINGSMKMVCLASVKANIKEN FFL CKNY 
Sbjct  1    MIQRELNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENFFFLECKNYL  60

Query  59   ---LKCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLTLK  101
               LKCKW ASVDSQDPKY+KCNGLMKRKKNFKNNEFFTA+ LTL+
Sbjct  61   KYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNEFFTAALLTLN  106

7) HPG27_480 in NC_011333


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 80/87 (92%), Positives = 81/87 (94%), Gaps = 4/87 (4%)

Query  1    MKMVCLASVKANIKENSFFLGCKNYLK----CKWTASVDSQDPKYPKCNGLMKRkknfkn  56
            MKMVCLASVKANIKEN FFL CKNYLK    CKWTASVDSQDPKY+KCNGLMKRKKNFKN
Sbjct  35   MKMVCLASVKANIKENFFFLECKNYLKYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKN  94

Query  57   neffTAALLTLNAMEFCLYINSEKKGN  83
            NEFFTAALLTLNAMEFCLYINSEKKGN
Sbjct  95   NEFFTAALLTLNAMEFCLYINSEKKGN  121

8) HPLT_02580 in NC_017362


> AY430173|1|G1|37998849|AAR07067.1|Helicobacter_pylori_Ca117|+|1..366|hp0521|-|cag 
2
Length=121

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 78/85 (92%), Positives = 79/85 (93%), Gaps = 4/85 (4%)

Query  1    MVCLASVKANIKENSFFLGCKNYLK----CKWTASVDSQDPKYPKCNGLMKRkknfknne  56
            MVCLASVKANIKEN FFL CKNYLK    CKWTASVDSQDPKY+KCNGLMKRKKNFKNNE
Sbjct  37   MVCLASVKANIKENFFFLECKNYLKYKLKCKWTASVDSQDPKYSKCNGLMKRKKNFKNNE  96

Query  57   ffTAALLTLNAMEFCLYINSEKKGN  81
            FFTAALLTLNAMEFCLYINSEKKGN
Sbjct  97   FFTAALLTLNAMEFCLYINSEKKGN  121