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Homologs of hp0521 gene of AY430171

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPSJM_02680
( YP_003928449.1 )

cag pathogenicity island protein Epsilon

NC_014560
(Helicobacter pylori SJM180)

4e-37

2) HPPN135_02550
( YP_005789727.1 )

cag pathogenicity island protein Epsilon

NC_017379
(Helicobacter pylori Puno135)

1e-35

3) HPSNT_02685
( YP_005786677.1 )

cag pathogenicity island protein Epsilon

NC_017376
(Helicobacter pylori Santal49)

1e-34

4) HPIN_04295
( YP_005782168.1 )

cag pathogenicity island protein Epsilon

NC_017372
(Helicobacter pylori India7)

3e-33

5) K750_04175
( YP_007982191.1 )

cag pathogenicity island protein

NC_021217
(Helicobacter pylori UM037)

8e-33

6) cag2
( YP_002301162.1 )

cag pathogenicity island protein Epsilon

NC_011498
(Helicobacter pylori P12)

1e-25

• Sequence Alignments

1) HPSJM_02680 in NC_014560


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  147 bits (540),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 91/102 (90%), Positives = 97/102 (96%), Gaps = 1/102 (0%)

Query  1    MIQRELNSVSFY-GCSNYVNKGDRKGILREINGSMKMVCLASVKANVKENSFFLGCKKYL  59
            MIQR LNSVSFY GCSNYVNKG+ KG+LREINGSMKMVCLASVKAN+KENSFFLGCK+YL
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  60

Query  60   KCKWTASVDSQDPKYPKCNGLMKRKKNFKSNEFFTATSLTLN  101
            KCKWT SVDSQDPKYPKCNGLMKRKKNFK+NEFFT TSLTL+
Sbjct  61   KCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLK  102

2) HPPN135_02550 in NC_017379


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  142 bits (521),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 103/110 (94%), Positives = 104/110 (95%), Gaps = 1/110 (0%)

Query  1    MIQRELNSVSFY-GCSNYVNKGDCKGVLREINGSMKMVCLASVKANIKENSFFLWCKNYL  59
            MIQR LNSVSFY GCSNYVNKG+CKGVLREINGSMKMVCLASVKANIKENSFFL CKNYL
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  60

Query  60   KCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLTLKCNGILSLY  109
            KCKW  SVDSQDPKYPKCNGLMKRKKNFKNNEFFT TSLTLKCNGILSLY
Sbjct  61   KCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLKCNGILSLY  110

3) HPSNT_02685 in NC_017376


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  138 bits (508),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 102/113 (91%), Positives = 103/113 (92%), Gaps = 3/113 (2%)

Query  1    MIQRELNSVSFY-GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  59
            MIQR LNSVSFY GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  60

Query  60   KCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLILNAMEYGILSLYQ  112
            KCKW  SVDSQDPKYPKCNGLMKRKKNFKNNEFFT TSL L+    GILSLYQ
Sbjct  61   KCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLKCN--GILSLYQ  111

4) HPIN_04295 in NC_017372


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  134 bits (491),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 101/113 (90%), Positives = 102/113 (91%), Gaps = 3/113 (2%)

Query  14   MIQRESNSVSFY-GYSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  72
            MIQR  NSVSFY G SNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  60

Query  73   KCKWIASVDSQDPKYPKCNGLMKRkknfknneffTATSLTLNAMEYGILSLYQ  125
            KCKW  SVDSQDPKYPKCNGLMKRKKNFKNNEFFT TSLTL+    GILSLYQ
Sbjct  61   KCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLKCN--GILSLYQ  111

5) K750_04175 in NC_021217


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  132 bits (486),  Expect = 8e-33, Method: Compositional matrix adjust.
 Identities = 99/113 (88%), Positives = 102/113 (91%), Gaps = 3/113 (2%)

Query  1    MIRRELNSVSFY-GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKKNSFFLGCKNYL  59
            MI+R LNSVSFY GCSNYVNKGGCKGVLREINGSMKMVCLASVKANIK NSFFLGCKNYL
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYL  60

Query  60   KCKWIASVDSQDPKCPKCNGLMKRkknfknneffTAASLTLNAMKYGILSLYQ  112
            KCKW  SVDSQDPK PKCNGLMKRKKNFKNNEFFT +SLTL+    GILSLYQ
Sbjct  61   KCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLKCN--GILSLYQ  111

6) cag2 in NC_011498


> AY430171|1|G1|37998845|AAR07065.1|Helicobacter_pylori_OM1006|+|1..339|hp0521|-|cag 
2
Length=112

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 89/106 (84%), Positives = 92/106 (87%), Gaps = 4/106 (3%)

Query  1    MIQRGLSSVSFYYGCSNYVNKGDCKGVLREINGSMKMVCLASVKANIKENSFFlgcknyl  60
            MIQRGL+SVSFYYGCSNYVNKG+CKGVLREINGSMKMVCLASVKANIKENSFF       
Sbjct  1    MIQRGLNSVSFYYGCSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFF----LGC  56

Query  61   kcklkckWTASVDSQDPKYPKCNGLMKRkknfknngffTAVSLILN  106
            K  LKCKWT SVDSQDPKYPKCNGLMKRKKNFKNN FFT  SL L+
Sbjct  57   KNYLKCKWTVSVDSQDPKYPKCNGLMKRKKNFKNNEFFTNTSLTLK  102