Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of cagF gene of AY136639

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) cagF
( YP_002266130.1 )

cag pathogenicity island protein F

NC_011333
(Helicobacter pylori G27)

5e-106

100

2) HMPREF4655_21059
( YP_005770146.1 )

cag pathogenicity island protein

NC_017360
(Helicobacter pylori 35A)

3e-103

3) K751_03345
( YP_007983649.1 )

sodium:calcium antiporter

NC_021218
(Helicobacter pylori UM066)

1e-102

4) HPPN120_02650
( YP_005788206.1 )

cag pathogenicity island protein (cagF, cag22)

NC_017378
(Helicobacter pylori Puno120)

8e-103

5) HPKB_0800
( YP_005762308.1 )

cag pathogenicity island protein F

NC_017354
(Helicobacter pylori 52)

2e-102

6) HPPC18_02595
( YP_006228785.1 )

cag pathogenicity island protein CagF

NC_017742
(Helicobacter pylori PeCan18)

2e-102

7) MWE_0978
( YP_006338470.1 )

cag pathogenicity island protein (CagF, cag22)

NC_017926
(Helicobacter pylori XZ274)

3e-102

8) HPAG1_0518
( YP_627259.1 )

cag pathogenicity island protein F

NC_008086
(Helicobacter pylori HPAG1)

5e-102

9) cagF
( NP_223209.1 )

cag island protein

NC_000921
(Helicobacter pylori J99)

9e-102

10) HPPC_02690
( YP_003926826.1 )

cag island protein

NC_014555
(Helicobacter pylori PeCan4)

1e-101

11) hp2017_0524
( YP_005783513.1 )

cag pathogenicity island protein

NC_017374
(Helicobacter pylori 2017)

2e-101

12) hp2018_0526
( YP_005791357.1 )

cag pathogenicity island protein

NC_017381
(Helicobacter pylori 2018)

2e-101

13) cagF
( YP_005793169.1 )

cag pathogenicity island protein F

NC_017382
(Helicobacter pylori 51)

2e-101

14) cag22
( YP_005765048.1 )

cag pathogenicity island protein

NC_017357
(Helicobacter pylori 908)

2e-101

15) cagF
( YP_003728721.1 )

cag pathogenicity island protein F

NC_014256
(Helicobacter pylori B8)

2e-101

16) HPGAM_02765
( YP_005780276.1 )

cag island protein

NC_017371
(Helicobacter pylori Gambia94/24)

2e-101

17) HPB14_04145
( YP_006219542.1 )

cag island protein

NC_017733
(Helicobacter pylori HUP-B14)

2e-101

18) HPSJM_02575
( YP_003928428.1 )

cag island protein

NC_014560
(Helicobacter pylori SJM180)

2e-101

19) HPLT_02680
( YP_005772679.1 )

cag pathogenicity island protein (cagF, cag22)

NC_017362
(Helicobacter pylori Lithuania75)

3e-101

20) HPELS_04045
( YP_005424929.1 )

cag island protein

NC_017063
(Helicobacter pylori ELS37)

4e-101

21) cagF
( YP_007536675.1 )

cag pathogenicity island protein

NC_020508
(Helicobacter pylori OK113)

5e-101

22) cagF
( YP_005775743.1 )

cag pathogenicity island protein

NC_017366
(Helicobacter pylori F32)

6e-100

23) HMPREF0462_0874
( YP_005785441.1 )

cag pathogenicity island protein

NC_017375
(Helicobacter pylori 83)

7e-100

24) cagF
( YP_002301184.1 )

cag pathogenicity island protein F

NC_011498
(Helicobacter pylori P12)

7e-100

25) K747_06785
( YP_007979544.1 )

sodium:calcium antiporter

NC_021215
(Helicobacter pylori UM032)

7e-100

26) K748_08025
( YP_008337459.1 )

sodium:calcium antiporter

NC_021882
(Helicobacter pylori UM298)

7e-100

27) K749_01420
( YP_007980081.1 )

sodium:calcium antiporter

NC_021216
(Helicobacter pylori UM299)

7e-100

28) cagF
( YP_005779050.1 )

cag pathogenicity island protein

NC_017368
(Helicobacter pylori F16)

7e-100

29) HPPN135_02680
( YP_005789753.1 )

cag pathogenicity island protein

NC_017379
(Helicobacter pylori Puno135)

8e-100

30) K750_04060
( YP_007982168.1 )

sodium:calcium antiporter

NC_021217
(Helicobacter pylori UM037)

8e-100

31) cagF
( YP_005777284.1 )

cag pathogenicity island protein

NC_017367
(Helicobacter pylori F57)

1e-99

32) cagF
( YP_005774528.1 )

cag pathogenicity island protein

NC_017365
(Helicobacter pylori F30)

1e-99

33) HPSH_04170
( YP_001910299.1 )

cag pathogenicity island protein CagF

NC_010698
(Helicobacter pylori Shi470)

1e-99

34) HPIN_04170
( YP_005782145.1 )

cag pathogenicity island protein F

NC_017372
(Helicobacter pylori India7)

2e-99

35) HPSNT_02795
( YP_005786699.1 )

cag pathogenicity island protein (cagF, cag22)

NC_017376
(Helicobacter pylori Santal49)

2e-99

36) HPSH169_02790
( YP_006225750.1 )

cag pathogenicity island protein CagF

NC_017740
(Helicobacter pylori Shi169)

4e-99

37) HPSH417_02595
( YP_006224166.1 )

cag pathogenicity island protein CagF

NC_017739
(Helicobacter pylori Shi417)

4e-99

38) HPCU_02970
( YP_005766668.1 )

cag pathogenicity island protein (cagF, cag22)

NC_017358
(Helicobacter pylori Cuz20)

4e-99

39) HPSH112_04320
( YP_006227558.1 )

cag pathogenicity island protein CagF

NC_017741
(Helicobacter pylori Shi112)

4e-99

40) HPV225_0547
( YP_005763478.1 )

cag pathogenicity island protein

NC_017355
(Helicobacter pylori v225d)

4e-99

41) HP0543
( NP_207339.1 )

cag pathogenicity island protein (cag22)

NC_000915
(Helicobacter pylori 26695)

1e-98

42) C694_02800
( YP_006934466.1 )

cag pathogenicity island protein (cag22)

NC_018939
(Helicobacter pylori 26695)

1e-98

43) C695_02800
( YP_006893031.1 )

cag pathogenicity island protein (cag22)

NC_018937
(Helicobacter pylori Rif1)

1e-98

44) C730_02800
( YP_006936072.1 )

cag pathogenicity island protein (cag22)

NC_018938
(Helicobacter pylori Rif2)

1e-98

45) cagF
( YP_007538423.1 )

cag pathogenicity island protein

NC_020509
(Helicobacter pylori OK310)

9e-96

• Sequence Alignments

1) cagF in NC_011333


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  376 bits (1414),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268
            ELFEKYFQNIDEVTNKMLDQKNQNKNND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

2) HMPREF4655_21059 in NC_017360


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  367 bits (1379),  Expect = 3e-103, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYIYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY+ +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

3) K751_03345 in NC_021218


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  365 bits (1372),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 258/268 (97%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFISLVYVYVYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSF+SLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

4) HPPN120_02650 in NC_017378


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  365 bits (1373),  Expect = 8e-103, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKENNSFVSLVYIYVYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFK NNSFVSLVY+YV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  IDEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

5) HPKB_0800 in NC_017354


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  364 bits (1367),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 261/268 (98%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFSFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDF FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQIDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

6) HPPC18_02595 in NC_017742


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  364 bits (1369),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  INEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIIDSIVPNWIQVDMSVEAKKK  240
            I+EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLI+DSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

7) MWE_0978 in NC_017926


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  364 bits (1366),  Expect = 3e-102, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFSFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDF FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

8) HPAG1_0518 in NC_008086


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  363 bits (1364),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLEILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLL ILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYEDVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYE+VLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDDVTNKMLDQKNQNKNND  268
            ELFEKYFQNID+VTNKMLDQKNQNKNND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

9) cagF in NC_000921


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  362 bits (1360),  Expect = 9e-102, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

10) HPPC_02690 in NC_014555


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1358),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

11) hp2017_0524 in NC_017374


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

12) hp2018_0526 in NC_017381


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

13) cagF in NC_017382


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDIKTEHLYSDLIDSLNANLHFVKSFLSNQDLDFSFFKEINDGQ  120
            FLEDHVNVFYENVLNIDD+KTEHLYS+LIDSLNANLHFVKSFLSNQDLDF FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

14) cag22 in NC_017357


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

15) cagF in NC_014256


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1357),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLISLQSGKNDANSFKANNSFVSLVYVYAYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLI+LQSGKNDA+SFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

16) HPGAM_02765 in NC_017371


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

17) HPB14_04145 in NC_017733


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1356),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 256/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

18) HPSJM_02575 in NC_014560


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  361 bits (1355),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

19) HPLT_02680 in NC_017362


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  360 bits (1353),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 255/268 (96%), Positives = 263/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYlfelreeldfieeeiegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEE+EGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDIKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFSFFKEINEGQ  120
            FLEDHVNVFYENVLNIDD+KTEHLYSGLIDSLNANLHFVKSFLSNQDLDF FFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYTYFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

20) HPELS_04045 in NC_017063


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  360 bits (1352),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 253/268 (95%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYEDVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINEGQ  120
            FLEDHVNVFYE+VLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEIN+GQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  +MLETI QSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

21) cagF in NC_020508


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  360 bits (1351),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 256/268 (96%), Positives = 262/268 (98%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFSFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDF FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFILETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVY  ++LETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFMHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDF HLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQENQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQ NQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

22) cagF in NC_017366


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1337),  Expect = 6e-100, Method: Compositional matrix adjust.
 Identities = 261/268 (98%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQGLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

23) HMPREF0462_0874 in NC_017375


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

24) cagF in NC_011498


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYEDVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYE+VLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIESFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240
            ISEDMQSDIE+FFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268
            ELFEKYFQNIDEVTNKMLDQKNQNKNND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

25) K747_06785 in NC_021215


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

26) K748_08025 in NC_021882


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

27) K749_01420 in NC_021216


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

28) cagF in NC_017368


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreelnfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EEL+FIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

29) HPPN135_02680 in NC_017379


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  INEDMQSDVENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I+EDMQSD+ENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

30) K750_04060 in NC_021217


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  356 bits (1336),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 262/268 (98%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDKVTNKMLDQKNQNKNSD  268
            ELFEKYFQNID VTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

31) cagF in NC_017367


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  355 bits (1334),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 260/268 (98%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDANSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDA+SFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

32) cagF in NC_017365


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  355 bits (1333),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLDIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVL+IDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDANSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDA+SFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

33) HPSH_04170 in NC_010698


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  355 bits (1333),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKADNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKA+NSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  IDEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

34) HPIN_04170 in NC_017372


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  354 bits (1329),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 259/266 (98%), Positives = 264/266 (99%), Gaps = 0/266 (0%)

Query  1    MKQNLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQNLREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRVLRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYR+LRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQIDMSIEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQIDMS+EAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKK  266
            ELFEKYFQNIDEVTNKMLDQKNQNK+
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKN  266

35) HPSNT_02795 in NC_017376


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  354 bits (1331),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 262/268 (98%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFSFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDF FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  IGEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240
            I+EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268
            ELFEKYFQNIDEVTNKMLDQKNQNKNND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

36) HPSH169_02790 in NC_017740


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  353 bits (1326),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKADNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKA+NSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  IDEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNENSD  268
            ELFEKYFQNIDEVTNKMLDQKNQN N+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

37) HPSH417_02595 in NC_017739


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  353 bits (1326),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKADNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKA+NSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  IDEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNENSD  268
            ELFEKYFQNIDEVTNKMLDQKNQN N+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

38) HPCU_02970 in NC_017358


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  353 bits (1327),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 256/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKAEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVK+EHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKENNSFVSLvyvyvySMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFK NNSFVSLVYVYV  MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  INEDMQSDIENFFVQANFLEYYVQNKIYPTSHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I+EDMQSDIENFFVQANFLEYYVQNKIYP +HAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKDQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQK+QNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

39) HPSH112_04320 in NC_017741


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  353 bits (1327),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelkeeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKAEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVK+EHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKENNSFVSLvyvyvySMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFK NNSFVSLVYVYV  MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  INEDMQSDIENFFVQANFLEYYVQNKIYPTSHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I+EDMQSDIENFFVQANFLEYYVQNKIYP +HAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKDQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQK+QNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

40) HPV225_0547 in NC_017355


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  353 bits (1327),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 266/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFHFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDF+FFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKALSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINSN  180
            DPQK+LSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPIN+N
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  INEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            I+EDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

41) C694_02800 in NC_018939


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  351 bits (1320),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQNDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQ+DIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNXSND  268
            ELFEKYFQNIDEVTNKMLDQKNQN +ND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

42) HP0543 in NC_000915


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  351 bits (1320),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQNDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQ+DIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNXSND  268
            ELFEKYFQNIDEVTNKMLDQKNQN +ND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

43) C695_02800 in NC_018937


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  351 bits (1320),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQNDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQ+DIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNXSND  268
            ELFEKYFQNIDEVTNKMLDQKNQN +ND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

44) C730_02800 in NC_018938


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  351 bits (1320),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 257/268 (96%), Positives = 264/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTALYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLT+LYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLvyvyvyFMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQNDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQTDMSVEAKKK  240
            ISEDMQ+DIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSI+PNWIQ DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNXSND  268
            ELFEKYFQNIDEVTNKMLDQKNQN +ND
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268

45) cagF in NC_020509


> AY136639|1|G1|23534548|AAN34511.1|Helicobacter_pylori_326|+|208..1014|cagF|-|putative 
outer membrane protein CagF
Length=268

 Score =  342 bits (1284),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 259/268 (97%), Positives = 265/268 (99%), Gaps = 0/268 (0%)

Query  1    MKQSLREQKLLKILENDVLTILDSFSNYLfelreeldfieeemegeiteQNLTTLYDFSN  60
            MKQ+LREQKLLKILENDVLTILDSFSNYLFEL+EELDFIEEEMEGEITEQNLTTLYDFSN
Sbjct  1    MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSN  60

Query  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLNNQDLDFRFFKEINDGQ  120
            FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFL+NQDLDFRFFKEINDGQ
Sbjct  61   FLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQ  120

Query  121  DPQKTLSRLIPLQSGKNDASSFKvnnsfvslvyvyvyfMLETIMQSYRILRLLEKPINNN  180
            DPQKTLSRLIPLQSGKNDASSFK NNSFVSLVYVYV +MLETIMQSYRILRLLEKPINNN
Sbjct  121  DPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLMLETIMQSYRILRLLEKPINNN  180

Query  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPTNHAYDFTHLIMDSIVPNWIQVDMSVEAKKK  240
            ISEDMQSDIENFFVQANFLEYYVQNKIYP NHAYDFTHLIMDSIVPNWIQ+DMSVEAKKK
Sbjct  181  ISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK  240

Query  241  ELFEKYFQNIDEVTNKMLDQKNQNKNSD  268
            ELFEKYFQNIDEVTNKMLDQKNQNKN+D
Sbjct  241  ELFEKYFQNIDEVTNKMLDQKNQNKNND  268