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Homologs of tcpA gene of AF452578

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03850 in NC_016944


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  254 bits (947),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLN++Q+++TQTYRSLGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A+A AA+ L++G+VSLGK+SADEAKNPFTG  + I SFPRN+A+NKAFAI+V+GLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+INV+E A  A+ADLGDFET+ A+A TG G+IKSIA GS NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HV++LC+GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

2) tcpA in NC_012578


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  254 bits (947),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLN++Q+++TQTYRSLGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A+A AA+ L++G+VSLGK+SADEAKNPFTG  + I SFPRN+A+NKAFAI+V+GLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+INV+E A  A+ADLGDFET+ A+A TG G+IKSIA GS NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HV++LC+GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

3) VCD_003500 in NC_012668


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  254 bits (947),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLN++Q+++TQTYRSLGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A+A AA+ L++G+VSLGK+SADEAKNPFTG  + I SFPRN+A+NKAFAI+V+GLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+INV+E A  A+ADLGDFET+ A+A TG G+IKSIA GS NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HV++LC+GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

4) VC0828 in NC_002505


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  254 bits (947),  Expect = 3e-69, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLN++Q+++TQTYRSLGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A+A AA+ L++G+VSLGK+SADEAKNPFTG  + I SFPRN+A+NKAFAI+V+GLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+INV+E A  A+ADLGDFET+ A+A TG G+IKSIA GS NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HV++LC+GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

5) tcpA in NC_016445


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  249 bits (931),  Expect = 5e-68, Method: Compositional matrix adjust.
 Identities = 156/199 (79%), Positives = 185/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLN++Q+++TQTYRSLGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   anasaatqlanGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A+A+AA+ L++G+VSLGK+SADEAKNPFTG  + I SFPRN+A+NKAFAI+V+GLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+INV+E A  A+ADLGDFET+ A+A TG G+IKSIA GS NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HV++LC+GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

6) tcpA in NC_012582


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  242 bits (902),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 160/199 (81%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LN+IQV+LTQTYR+LGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            ADA+AA+ LTSG+VSLGKIS+DEAKNPF G N+NI SFPRNAA+NKAFAISVDGLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPYI ++  +AVALADLGDFE ++A A TG G+IKSIA +S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCKGTAPFGVAFGNS  224
            HV++LC GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

7) tcpA in NC_009457


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  242 bits (902),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 160/199 (81%), Positives = 184/199 (93%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LN+IQV+LTQTYR+LGNYPAT
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            ADA+AA+ LTSG+VSLGKIS+DEAKNPF G N+NI SFPRNAA+NKAFAISVDGLTQAQC
Sbjct  61   ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPYI ++  +AVALADLGDFE ++A A TG G+IKSIA +S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEIT  180

Query  206  HVEKLCKGTAPFGVAFGNS  224
            HV++LC GT+ F+VAFGNS
Sbjct  181  HVQNLCAGTGTFSVAFGNS  199

8) tcpA in NC_006841


> AF452578|1|G1|18071796|AAL58337.1|Vibrio_cholerae_523-80|+|1..600|tcpA|-|TcpA
Length=199

 Score =  153 bits (564),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 92/192 (48%), Positives = 141/192 (74%), Gaps = 5/192 (2%)

Query  9    MTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSYPDV  68
            MTLLEVIIVLGIMGV+SAGVV LAQRAID+QN++K +Q LNTIQ ++ QTYRS  +YP  
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNTIQVSLTQTYRSLGNYPAT  60

Query  69   LQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLSKDQ  128
              DA  A  LT ++VS+G+++  +  NPFTG  + I +   N A+N++FAI V +L++ Q
Sbjct  61   -ADAAAAAALTSGMVSLGKISADEAKNPFTGNNLNIWSFPRNAAGNKAFAISVDGLTQAQ  119

Query  129  CTSLISNSADLFSFIEVQNRGT-AMA--ADFYVDP-DATKSVGVIKSTKGGAKTLDLTNL  184
            C +L+++ +D+F++I+VQ++++ A+A  +DF  +P +A  + G+IKS   G+  L+LT++
Sbjct  120  CKTLVTSVGDMFPYINVQEKAAVALADLGDFETGPANAVTGKGIIKSIATGSVNLNLTEI  179

Query  185  DHISALCGGPGA  196
             H+  LC+G G+
Sbjct  180  THVQNLCAGTGT  191