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Homologs of tcpA gene of AF452575

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03850 in NC_016944


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 181/200 (91%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+Q+A+TQTYR+LG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A A  A++L+ GLVSLGK+S+DEAKNPFTG+ M IFSFPRNSAA+KAFAI+V GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFA-AVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNI  204
            KTL+TSVGDMFP+I VK GA + AVADLGDFETS A AA G GVIKSIAP++ NLNLT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCTGTAPFTVAFGNS  224
            THVEKLCTG APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

2) tcpA in NC_012578


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 181/200 (91%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+Q+A+TQTYR+LG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A A  A++L+ GLVSLGK+S+DEAKNPFTG+ M IFSFPRNSAA+KAFAI+V GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFA-AVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNI  204
            KTL+TSVGDMFP+I VK GA + AVADLGDFETS A AA G GVIKSIAP++ NLNLT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCTGTAPFTVAFGNS  224
            THVEKLCTG APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

3) VCD_003500 in NC_012668


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 181/200 (91%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+Q+A+TQTYR+LG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A A  A++L+ GLVSLGK+S+DEAKNPFTG+ M IFSFPRNSAA+KAFAI+V GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFA-AVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNI  204
            KTL+TSVGDMFP+I VK GA + AVADLGDFETS A AA G GVIKSIAP++ NLNLT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCTGTAPFTVAFGNS  224
            THVEKLCTG APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

4) VC0828 in NC_002505


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  259 bits (968),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 181/200 (91%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+Q+A+TQTYR+LG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A A  A++L+ GLVSLGK+S+DEAKNPFTG+ M IFSFPRNSAA+KAFAI+V GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFA-AVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNI  204
            KTL+TSVGDMFP+I VK GA + AVADLGDFETS A AA G GVIKSIAP++ NLNLT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCTGTAPFTVAFGNS  224
            THVEKLCTG APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

5) tcpA in NC_012582


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  256 bits (955),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 168/200 (84%), Positives = 185/200 (93%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            A A  A+KLT+GLVSLGKISSDEAKNPF G++MNIFSFPRN+AA+KAFAISV+GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggav-aladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNI  204
            KTLITSVGDMFPYIA+KAG++  A+ADLGDFE S+A A  GVGVIKSIAPA+ NL+LT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCKGTAPFGVAFGNS  224
            THVEKLC G APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

6) tcpA in NC_009457


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  256 bits (955),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 168/200 (84%), Positives = 185/200 (93%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            A A  A+KLT+GLVSLGKISSDEAKNPF G++MNIFSFPRN+AA+KAFAISV+GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggav-aladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNI  204
            KTLITSVGDMFPYIA+KAG++  A+ADLGDFE S+A A  GVGVIKSIAPA+ NL+LT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCKGTAPFGVAFGNS  224
            THVEKLC G APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

7) tcpA in NC_016445


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  255 bits (951),  Expect = 1e-69, Method: Compositional matrix adjust.
 Identities = 160/200 (80%), Positives = 182/200 (91%), Gaps = 1/200 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+Q+A+TQTYR+LG+YP++
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  86   anasaatqlanGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            A A+ A++L+ GLVSLGK+S+DEAKNPFTG+ M IFSFPRNSAA+KAFAI+V GLTQAQC
Sbjct  61   AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFA-AVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNI  204
            KTL+TSVGDMFP+I VK GA + AVADLGDFETS A AA G GVIKSIAP++ NLNLT I
Sbjct  121  KTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTTI  180

Query  205  THVEKLCTGTAPFTVAFGNS  224
            THVEKLCTG APF VAFGNS
Sbjct  181  THVEKLCTGDAPFIVAFGNS  200

8) tcpA in NC_006841


> AF452575|1|G1|18071791|AAL58335.1|Vibrio_cholerae_8-76|+|1..603|tcpA|-|TcpA
Length=200

 Score =  156 bits (575),  Expect = 8e-40, Method: Compositional matrix adjust.
 Identities = 94/193 (49%), Positives = 138/193 (72%), Gaps = 6/193 (3%)

Query  9    MTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSYPDV  68
            MTLLEVIIVLGIMGV+SAGVV LAQRAID+QN++K +Q+LN+IQ A+ QTYR+   YP  
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGKYPTA  60

Query  69   LQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLSKDQ  128
               A  A KLT +LVS+G+++  +  NPFTG+ M IF+   N AA+++FAI V +L++ Q
Sbjct  61   -AAAGDAAKLTAGLVSLGKISSDEAKNPFTGSDMNIFSFPRNSAADKAFAISVEGLTQAQ  119

Query  129  CTSLISNSADLFSFIEVQNRGTAMA----ADFYVDPD-ATKSVGVIKSTKGGAKTLDLTN  183
            C +LI++ +D+F++I V+  +T++A    +DF   P  A+ +VGVIKS   ++  L+LT 
Sbjct  120  CKTLITSVGDMFPYIAVKAGATSLAVADLGDFETSPAKAADGVGVIKSIAPAGVNLNLTT  179

Query  184  LDHISALCGGPGA  196
            + H+  LC G ++
Sbjct  180  ITHVEKLCTGDAP  192